miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 172 bits (87), Expect = 7e-43
Identities = 114/124 (91%), Gaps = 8/124 (6%)
Strand = Plus / Minus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcattgcttatat--------tc 53
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 126 tttatactccctccgtttcataatgtaagactttctagcattgcttatatgtctagattc 67
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66 attaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaag 7
Query: 114 tact 117
||||
Sbjct: 6 tact 3
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgc 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 76 gcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 125 bits (63), Expect = 1e-28
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatcta 64
||||||||||||||||||| | |||||||||||| |||||| | |||||||| ||||||
Sbjct: 4 atactccctccgtttcatattataagactttctaacattgcccacattcattatcatcta 63
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||| |||||||||||| ||| || ||||||||||||||||||
Sbjct: 64 tatgaatatgggtaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||| | ||||||||||||||||| | |||||||| | ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||||| ||||||| ||| || ||||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 9e-27
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggag 11
Query: 110 gaagtact 117
||||||||
Sbjct: 10 gaagtact 3
Score = 99.6 bits (50), Expect = 8e-21
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 160 tttatactccctccgtttcataatgtaagactttgtagcattgcttatattcat 107
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgc 44
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||| | ||||||||| |||| ||| ||||||||||||||
Sbjct: 91 attcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaaacggag 150
Query: 110 gaagta 115
| ||||
Sbjct: 151 ggagta 156
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 115 bits (58), Expect = 1e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||| | ||||||||||||||||||| |||||||||| ||| |||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcattagcatttat 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| |||| |||||||| ||| || ||||||||||||| ||||
Sbjct: 54 atgaatgtggacaatactagaaagtcttatagtatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 95/111 (85%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacat-cta 64
|||||||||||||||||| | ||||||||||||| |||| | |||||| | || |||
Sbjct: 5 tactccctccgtttcatactataagactttctagtattgtccacattcatataaatgcta 64
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| ||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 65 -atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 111 bits (56), Expect = 2e-24
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatct 63
||||||||||| |||||||| |||| ||||||| |||||| | ||||||||||| ||||
Sbjct: 3 tatactccctctgtttcatattgtatgactttcaagcatttcccatattcattaatatct 62
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||||| ||||||||| ||| ||| |||||| |||||||||
Sbjct: 63 atatgaatgtgggcaacgctagaaagtcttacattgtgaaacagaggaagta 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||| |||||| |||||||||||||||||| ||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgc 75
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 8e-24
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggag 11
Query: 110 gaa 112
|||
Sbjct: 10 gaa 8
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||| ||||||||||||| |||||| ||||| |||| ||||||||||
Sbjct: 91 attcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaacggag 150
Query: 110 gaagta 115
| ||||
Sbjct: 151 ggagta 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 11 cctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||| |||| | ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgc 44
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 107 bits (54), Expect = 3e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||||||||||||||| |||||||| | |||||||||| | | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcattaacatcaat 64
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||| || |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 65 atgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||| |||||||| | |||||||||| | || |||||| || |
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||| |||||||||| ||||| ||| ||||||||||| |||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 154
Query: 110 gaagta 115
| ||||
Sbjct: 155 ggagta 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||||||| | |||||||||||||||||||
Sbjct: 162 tatactccctccgtttcatattataagactttctagcattgc 121
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgc 44
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattgc 45
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 161 ttatacttcctccgtttcataatgtaagactttctagcattgc 119
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcatt 42
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 120
Query: 110 gaagta 115
||||||
Sbjct: 121 gaagta 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||||||||||||| ||| || ||||||||||||| |||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 128 tatacttcctccgtttcatattataagactttctagcattgc 87
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggag 152
Query: 110 gaagtac 116
| |||||
Sbjct: 153 ggagtac 159
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattgc 45
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 ttatacttcctccgtttcataatgtaagactttctagcattgc 44
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcat 109
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcat 109
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| |||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgc 44
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 110 gaagtact 117
||||||||
Sbjct: 127 gaagtact 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 67 tgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||||||||| ||| || ||||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||| |||||||| | |||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgc 93
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 110 gaagtact 117
||||||||
Sbjct: 127 gaagtact 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 67 tgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||||||||| ||| || ||||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||| |||||||| | |||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgc 93
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacggag 11
Query: 110 gaagtact 117
||||||||
Sbjct: 10 gaagtact 3
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| |||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgc 119
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcatt 42
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 101 bits (51), Expect = 2e-21
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgct-tatattcattaacatcta 64
|||||||||||||||| |||||||| | ||||||||| | || ||||||||| ||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatatatctagattcattaatatcaa 64
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 65 tatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatt 78
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 101 bits (51), Expect = 2e-21
Identities = 103/122 (84%), Gaps = 10/122 (8%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc----------ttatattc 53
|||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 126 tatactccctccgtttcataatgtaagactttctagcattgcctgtacatatctagattt 67
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||| ||
Sbjct: 66 attaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggag 7
Query: 114 ta 115
||
Sbjct: 6 ta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3 tatactccctccatttcataatgtaagactttctagcattg 43
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 75 ggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 110 gaagtac 116
| |||||
Sbjct: 135 ggagtac 141
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacggaagaa 8
Query: 113 gta 115
|||
Sbjct: 7 gta 5
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgc 101
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 13 tccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcat 54
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||| |||| |||||||||||| ||| |||||||||||||||
Sbjct: 75 attcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggag 134
Query: 110 gaagtac 116
| |||||
Sbjct: 135 ggagtac 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||| |||||||||||||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcatt 103
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||| |||| |||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcat 54
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttatactccctccgtttcataatgtaagactttctagcattgc 44
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 143
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgc 103
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||||||||||| | ||||||||||
Sbjct: 161 ttatactccctccgtttcataatgtaagtcattctagcatt 121
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| | ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgc 44
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||| ||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
||||||||||||||||||||||||||| ||| || | ||||| ||||| ||||||
Sbjct: 82 tatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagtact 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgc 44
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 89.7 bits (45), Expect = 8e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
||||||||||||||||||| ||||||||||||||||||| ||| || |||||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 111 aagta 115
||||
Sbjct: 9 gagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||| | |||||||||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgc 44
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||||||||||| | |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgc 119
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 69 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 10
Query: 111 aagtactgt 119
||||||||
Sbjct: 9 gagtactgt 1
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcat 54
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||| |||| ||| |||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 162 tttatactccctccgtttcacaatgtaagactttttaggattg 120
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 153
Query: 111 aagtactgt 119
||||||||
Sbjct: 154 gagtactgt 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||| |||| ||| |||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcat 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 1 tttatactccctccgtttcacaatgtaagactttttaggattg 43
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 82 attcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacggag 141
Query: 110 gaagtact 117
| ||||||
Sbjct: 142 ggagtact 149
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgc 108
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgct 46
|||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgct 45
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggag 153
Query: 110 gaagtac 116
| |||||
Sbjct: 154 ggagtac 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 55 ttaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagt 114
|||||||||||||||||||||| |||||||||||| ||| || ||||||||||||| |||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 115 a 115
|
Sbjct: 5 a 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1 tttatactccctccgtttcatattataagactttctagcatt 42
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| | | |||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgc 120
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggag 126
Query: 110 gaagta 115
||||||
Sbjct: 127 gaagta 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||||| | |||||||||| | |||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcattacctatattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||| ||||||||| | || |||||||||| ||||| ||||||||||||||| ||||
Sbjct: 62 acatatatatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| ||||| |||||||||||||| | ||||||||||||
Sbjct: 134 tatacttcctccatttcataatgtaagtcattctagcattgc 93
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcat 54
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 91 attcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 150
Query: 110 gaagta 115
||||||
Sbjct: 151 gaagta 156
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| | ||||||||||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattg 118
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| | ||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgc 119
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 91.7 bits (46), Expect = 2e-18
Identities = 99/117 (84%), Gaps = 6/117 (5%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaa------c 59
|||||||||||||||| ||||||||| ||||||||||||| | |||||| | |
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatgctc 61
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||
Sbjct: 60 atctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagtac 4
Score = 73.8 bits (37), Expect = 5e-13
Identities = 96/116 (82%), Gaps = 6/116 (5%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaa------c 59
|||| ||||||||||| |||||||||||||||||| |||| | |||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatgagc 64
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||
Sbjct: 65 atctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattg 44
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattg 43
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
||||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctag 125
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 70 attcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgc 44
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgc 119
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaag 132
Query: 114 ta 115
||
Sbjct: 133 ta 134
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattg 43
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||||||||| |||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgc 95
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||||| ||||||||||||| ||| | ||||||||||||| |||||
Sbjct: 60 atctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 89.7 bits (45), Expect = 8e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||||||||||||| |||||||||| |||||| ||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 111 aagta 115
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| |||| ||||||||||||||||||| ||||||| ||| || ||||||||||||
Sbjct: 70 attcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaacggag 11
Query: 110 gaagtact 117
||||||||
Sbjct: 10 gaagtact 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| ||||||||||||| ||| |||| |||||||| ||| || ||||||||||||
Sbjct: 93 attcattgacatctatatgaagatggacaattctagaaagtcttataatatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||| | ||||||||||||| ||||
Sbjct: 158 tactccctccgtttcatattataagactttctagaattg 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||||||||||| | |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgc 44
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggag 152
Query: 110 gaagtact 117
| ||||||
Sbjct: 153 ggagtact 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| || |||| || ||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||| | || |||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgc 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagc 40
|||| |||||||||||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagc 39
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacagag 126
Query: 110 gaagtact 117
| ||||||
Sbjct: 127 ggagtact 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattg 94
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattg 44
||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattg 43
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||| ||||||||||||| ||| || |||||||| |||
Sbjct: 70 attcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaacagag 129
Query: 110 gaagtact 117
||||||||
Sbjct: 130 gaagtact 137
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||| |||||||||||||| |||||||||||| ||| || || |||||||||||||||
Sbjct: 63 aacatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||| |||| |||||||| | ||||||||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattg 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||| || | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcatt 42
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| |||||||| |||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct: 93 attcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatgaagcggag 152
Query: 110 gaagtact 117
||||||||
Sbjct: 153 gaagtact 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcat 54
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
||||||||||||||||||||| || |||||||||| ||| ||||||||||||||| |
Sbjct: 67 cattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacggaggga 8
Query: 113 gtact 117
|||||
Sbjct: 7 gtact 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||| |||||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgc 119
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | |||||||||| ||||| |||| ||||||||||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 121
Query: 110 gaagtact 117
||||||||
Sbjct: 122 gaagtact 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagtact 117
|||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtact 3
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
|||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 113 gta 115
|||
Sbjct: 127 gta 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatt 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaag 30
||||||||||||||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 4
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 110 gaagta 115
| ||||
Sbjct: 137 ggagta 142
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgc 44
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 145 ttatactccctccgtttcataatgtaaaactttttagcattgc 103
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||| ||||||||| ||||||||||||| ||| || ||||||||||||| ||
Sbjct: 66 attaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaacggagggag 7
Query: 114 tac 116
|||
Sbjct: 6 tac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||| | ||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattg 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattg 44
||||| ||||||||||||| | ||||||||||||||||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattg 99
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||||||||| |||||||| ||| || |||||||| |||
Sbjct: 70 attcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaat 80
|||||||||||||||||||||||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaat 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||| |||||||| | ||||||||||||| |||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgc 44
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 134
Query: 110 gaagtac 116
| |||||
Sbjct: 135 ggagtac 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 114 tac 116
|||
Sbjct: 6 tac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatt 103
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||| |||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgc 119
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||||| |||||| ||||||||||||||||| ||| ||| ||||||||||
Sbjct: 93 attcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||||||||| |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgc 44
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 151
Query: 110 gaagtact 117
| ||||||
Sbjct: 152 ggagtact 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatt 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| ||||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgct 46
|||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgct 118
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacg 106
|||||||||||||||||| |||||||| |||||| || |||| ||| ||| | |||||
Sbjct: 73 tatattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaaaacg 14
Query: 107 gaggaagta 115
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||||||||||||| ||||||| ||| || ||||||||||||
Sbjct: 73 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 132
Query: 110 gaagta 115
| ||||
Sbjct: 133 ggagta 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||||||| ||||| || ||| || ||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgc 99
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | |||||||||| || || ||| ||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggag 135
Query: 110 gaagtac 116
| |||||
Sbjct: 136 ggagtac 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||||||| | ||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatt 104
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||||||||||| | |||||||||| ||||| ||| |||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 111 aagta 115
||||
Sbjct: 145 gagta 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 93 attcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgc 119
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||||||| ||||||||||| ||||||||| ||| |||||||||| |||
Sbjct: 70 attcattagtatctatataaatgtgggcaacgctagaaagtcttacattatgaaacagag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 3 tatacttcctctgtttcataatgtaagactttctagcgttgc 44
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| | ||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 70 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgc 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 77 caatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||| ||| || ||||||| |||||||||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagtac 129
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||||||||||||| |||||||||| ||||| ||| |||||| ||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaccgagg 141
Query: 111 aagta 115
||||
Sbjct: 142 gagta 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 83.8 bits (42), Expect = 5e-16
Identities = 89/105 (84%), Gaps = 6/105 (5%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||||||||||||||| | | || |||| |||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttgtgtc------tagattcgttaacatctat 58
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||| ||||||||||||| ||| |||||||||||||||
Sbjct: 59 atgaatgtggacaatgctagaaagtcttacattatgaaacggagg 103
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 9 tccctccgtttcataatgtaagactttctagcattg 44
||||||||||||||||||||||||||||||||||||
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattg 70
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||| |||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 69 atctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| | ||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 63 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 122
Query: 110 gaagta 115
| ||||
Sbjct: 123 ggagta 128
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||||| | |||||||||||||||||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgc 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 77 caatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||| ||| || ||||||| |||||||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagtac 4
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 84 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 143
Query: 110 gaagta 115
| ||||
Sbjct: 144 ggagta 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatt 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||
Sbjct: 93 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||| |||||||||||||||||||| | |||||||| |||| | ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcat 54
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| |||||| | |||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgc 119
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctag 38
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||||||| ||||||||| ||| |||||||||| |||
Sbjct: 70 attcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| | ||||||||||||||||||||||||| |||| ||| |||||||||| |||
Sbjct: 93 attcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgag 152
Query: 110 gaagtac 116
| |||||
Sbjct: 153 ggagtac 159
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||| |||||||||||||||||||| |||||||||
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgc 119
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgc 44
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 110 gaagta 115
| ||||
Sbjct: 131 ggagta 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcatt 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 69 aatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||||| | |||| ||| |||| ||||||||||||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 69 aatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||||| | |||| ||| |||| ||||||||||||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| ||||||||| ||||| |||| ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 110 gaagta 115
||||||
Sbjct: 127 gaagta 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| |||||||||||| |||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| ||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||| ||||||||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcatt 56
|||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatt 55
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgc 119
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||| | ||||||||| |||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 5e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||||||||||||||| ||||||| | |||||||||| || | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcattagcatcaat 64
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||| ||||||| || |||||| ||| || |||| |||||||
Sbjct: 65 atgaatgtgggaaatgctaaaatgacttgcattgtggaacgagggaagta 114
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||| |||||||||||||||||||| | |||||||| |||| | ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcat 109
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||||||| ||||| ||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacggag 134
Query: 110 gaagta 115
||||||
Sbjct: 135 gaagta 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatt 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 74 attcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggag 133
Query: 110 gaagta 115
||||||
Sbjct: 134 gaagta 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| ||||| ||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 81.8 bits (41), Expect = 2e-15
Identities = 94/113 (83%), Gaps = 9/113 (7%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatcta 64
||||| ||||||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct: 4 atacttcctccgttttataatataagactttctagcattgctcatatta---------ta 54
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
||||||| ||| ||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 55 tatgaatatggacaatgctagaaagtcttatattatgagacggaggaagtact 107
Score = 58.0 bits (29), Expect = 3e-08
Identities = 90/110 (81%), Gaps = 9/110 (8%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||| ||||||| |||||||||||||||||| |||||||| ||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcat--------at 54
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|| ||| || |||||||||||||| ||| |||||| ||||||||||||||
Sbjct: 53 at-aatatgagcaatgctagaaagtcttatattataaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 79.8 bits (40), Expect = 7e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 56 taacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacggag 131
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattg 44
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 138 atactctctccgtttcataatgtaagactttctagcattg 99
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgc 44
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 79.8 bits (40), Expect = 7e-15
Identities = 92/109 (84%), Gaps = 4/109 (3%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg----cttatattcattaacat 61
|||||||||||||||| |||||||| ||||||||||||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtccacacagattcattaacat 64
Query: 62 ctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
||| || ||||||| |||| |||||||| ||| ||| |||||||||||
Sbjct: 65 ctaaataaatgtggacaatactagaaagccttacattgtgaaacggagg 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 9 tccctccgtttcataatgtaagactttctagcattg 44
||||||||||||| |||||||| |||||||| ||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattg 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 71 tgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||| ||||||||||||| ||| ||| ||||||||||| |||||
Sbjct: 49 tgtggacaatgctagaaagccttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaag 108
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||||| ||||||||||||| |||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaaag 7
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaag 108
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||||| ||||||||| |||||||||||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaaag 7
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaag 108
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaaag 7
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 7e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 112 agta 115
||||
Sbjct: 127 agta 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 55 ttaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagt 114
|||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 115 ac 116
||
Sbjct: 5 ac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatt 93
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 110 gaagtac 116
| |||||
Sbjct: 135 ggagtac 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 114 tac 116
|||
Sbjct: 6 tac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatt 103
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 152
Query: 110 gaagtac 116
| |||||
Sbjct: 153 ggagtac 159
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||||||| || | ||||| ||||| |||| ||||||||||
Sbjct: 70 attcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatt 121
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| || ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||| |||||||| ||| ||| || ||||| ||| ||||||||||
Sbjct: 93 attcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||
Sbjct: 91 attcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggag 150
Query: 110 gaagtac 116
| |||||
Sbjct: 151 ggagtac 157
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| ||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 70 attcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||| ||| | || |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatt 119
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 gtagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||| ||||| ||| |||||||||||||||||
Sbjct: 103 aatgctagaatgacttacattgtgaaacggaggaagtac 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcatt 103
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||| |||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||
Sbjct: 66 attagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaag 7
Query: 114 tac 116
|||
Sbjct: 6 tac 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttctaacattgc 119
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcatt 42
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||| | |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||||||| ||||||||||| ||| | ||| ||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||| || ||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 91 attcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggag 150
Query: 110 gaagta 115
||||||
Sbjct: 151 gaagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacg 106
|||||||||||||| | ||||||||||| | |||||||||| ||||| ||| |||||||
Sbjct: 73 tatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 107 gaggaagtact 117
|||||||||||
Sbjct: 13 gaggaagtact 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcatt 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||||||||| || |||||||||| ||||| |||| ||||||||||
Sbjct: 87 attcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacggag 146
Query: 110 gaagta 115
| ||||
Sbjct: 147 ggagta 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatt 115
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacg 106
|||||||||||||||| ||||||||||||| |||||||||| ||||| ||| |||||||
Sbjct: 80 tatattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 139
Query: 107 gaggaagtact 117
| || ||||||
Sbjct: 140 gggggagtact 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||| |||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| ||||||||||||| |||||||||| ||||| || ||||||||||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 114 tac 116
|||
Sbjct: 136 tac 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| || ||||| | ||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatt 100
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 114 ta 115
||
Sbjct: 136 ta 137
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 61 catctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 140 ttatactccctccgtttcataatgtaagttattctagcattg 99
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| |||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgc 44
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||| || |||||||||| ||||| ||||||||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggag 117
Query: 110 gaagta 115
| ||||
Sbjct: 118 ggagta 123
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatt 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| ||||| ||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||| | |||||||||| ||||| |||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 129
Query: 110 gaagta 115
||||||
Sbjct: 130 gaagta 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagactt 93
|||||| |||| ||||||||||| | |||||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgactt 27
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||||||| |||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| ||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| ||||||||||||| |||||||||| ||||| ||||||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatt 98
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcatt 43
||||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 2 ttatacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 73 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 132
Query: 110 gaagta 115
| ||||
Sbjct: 133 ggagta 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatt 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | || |||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcatt 42
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| |||||||| |||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcat 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||| |||||| | |||||||| ||| || ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
|||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctag 38
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||| ||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 114 ta 115
||
Sbjct: 139 ta 140
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattg 102
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| ||||||||||||| |||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagactttttagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||| ||| ||||||| |||| ||| ||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| |||||||||||||||||| || || |||||||||| |||
Sbjct: 67 attcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacagag 126
Query: 110 gaagta 115
| ||||
Sbjct: 127 ggagta 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 61 tctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||| || |||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 59 tctatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||| |||||||||||||| | ||||||||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgc 93
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| ||| ||||||||||| |||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| || ||| ||||||||||||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggag 152
Query: 110 gaagtact 117
| ||||||
Sbjct: 153 ggagtact 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattg 120
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatat 51
|||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatat 50
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||| |||||||||||| |||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| |||||||| || || |||||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcatt 56
|||| ||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatt 108
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| || |||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 70 attcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggag 129
Query: 110 gaagta 115
||||||
Sbjct: 130 gaagta 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||| ||| || |||||||| | |||||||||| ||||| |||| |||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 112 agta 115
||||
Sbjct: 8 agta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | ||| |||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatt 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||| | |||||||||| ||||| ||||||||| ||||| ||||
Sbjct: 79 atatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctag 39
||||| |||||||||||||||||||| | ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||||||||| |||||||||||| ||| || | ||||||||||
Sbjct: 67 attcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacggag 126
Query: 110 gaagta 115
| ||||
Sbjct: 127 ggagta 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
|||| |||||||||||||| ||| |||||||| ||| || ||||||||||||||||||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagtact 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| | | |||||||||||||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcatt 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
|||| ||||||||||||| | |||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctag 38
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| |||||||||| ||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||| |||||||||||| ||||||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcat 54
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||| ||||||||||||||| || |||| ||| ||| ||||||||||
Sbjct: 93 attcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| ||||||||||||| || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgc 119
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| ||||| ||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 87 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 146
Query: 110 gaagta 115
| ||||
Sbjct: 147 ggagta 152
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| ||||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatt 115
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||
Sbjct: 93 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 gtagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
|||||||| |||||||||||||||||||| |||||| ||| || ||||||||||||||
Sbjct: 66 attaacatatatatgaatgtgggcaatgccagaaagtcttataacttgaaacggaggaag 7
Query: 114 ta 115
||
Sbjct: 6 ta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||| |||||||||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||||||||| | |||| || || ||||| | | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||| ||||| ||||| |||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggag 129
Query: 110 gaagta 115
| ||||
Sbjct: 130 ggagta 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 56 taacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||||||||||| |||||||||| ||||| |||| ||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 110 gaagta 115
||||||
Sbjct: 129 gaagta 134
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| ||| ||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||||||||||| || |||||||||| ||| || ||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Query: 110 gaagta 115
||||||
Sbjct: 134 gaagta 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
||||||||||||| ||| || |||||||||| ||| || ||||||||||| ||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagtact 3
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||| ||||||| || ||||| |||| ||||||||||
Sbjct: 70 attcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatt 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||| |||||| |||||||||| | ||| |||| ||||||||||
Sbjct: 93 attcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| ||||||||||||| ||||||| || ||||| |||| ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcatt 42
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| |||||||||||||| |||| |||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||| |||| ||||||| | ||||| |||| ||| |||| ||||||||||
Sbjct: 89 attcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacggag 148
Query: 110 gaagta 115
| ||||
Sbjct: 149 ggagta 154
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgc 45
||||| ||||||||||| ||||||||||||| |||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgc 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagca 41
|||||||||||||||| ||| ||||||||| |||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagca 119
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcat 59
Score = 67.9 bits (34), Expect = 3e-11
Identities = 87/105 (82%), Gaps = 6/105 (5%)
Strand = Plus / Plus
Query: 11 cctccgtttcataatgtaagactttctagcattgcttatattcattaacatctatatgaa 70
||||||||||||||||||| |||||||||||||| | || ||||||||||||||
Sbjct: 10 cctccgtttcataatgtaaaactttctagcattg------tacacaaacatctatatgaa 63
Query: 71 tgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
| || |||||||||||||| ||| ||| | ||||||||| ||||
Sbjct: 64 tatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacg 106
|||||||||||| ||| |||||||||| || |||||||||| ||||| ||| |||||||
Sbjct: 58 tatattcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacg 117
Query: 107 gaggaagta 115
|||||||||
Sbjct: 118 gaggaagta 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||| ||||| |||||||||| ||||| ||| ||||||||||| |||||
Sbjct: 57 tatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatt 89
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcat 54
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagca 41
|||||||||||||||| |||||||||||||||||||
Sbjct: 98 tactccctccgtttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||| |||||||||| ||||| |||| |||||||||||||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||||| | ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 81 atctatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagtac 137
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||||||||| || |||||||| ||||| ||||| ||||||||||||||
Sbjct: 70 attcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||| |||||||||||||||||||| | |||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattg 98
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgct 46
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgct 43
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagc 40
|||||| |||||||||||||||||||| |||||||||
Sbjct: 3 tatacttcctccgtttcataatgtaagtctttctagc 39
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 76 gcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||||||||| ||||||||||||||| |||||
Sbjct: 44 gcaatgctagaaagacttacattatgaaacggagggagtac 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 81 gctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| ||||||||||||||||||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||||||||||||||||| ||| || ||||||||||||| ||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 90/110 (81%), Gaps = 10/110 (9%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||||||||||||||||| | ||||||||||||||||||| | |||| ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattc----------at 54
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|| || |||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 55 ataaacgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42 attcattaacatccatatgaatgtgggcaatgctagaaag 3
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||| |||||||||||||||||| |||||||
Sbjct: 71 attcattaacatccatatgaatgtgggcaatgttagaaag 110
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||||||| ||||| ||| ||||||||||
Sbjct: 74 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 133
Query: 110 gaagtact 117
| ||||||
Sbjct: 134 ggagtact 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| |||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatt 102
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1 tttatactccctccgtttcacaatgtaagattttctagcattgc 44
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||| | ||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| ||||||||| | |||||||||||| ||| |||| || |||||||||||||
Sbjct: 81 acatctaaatgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcatt 56
|||| |||||||| || ||| ||||||||||||||||| || | |||||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactcacattcatt 88
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||| ||| |||| ||||||| |||||||||| ||||| ||| ||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 114 ta 115
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| |||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatt 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||| ||| |||| |||||||| |||||||||| ||||| ||| ||||||||||| ||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 114 ta 115
||
Sbjct: 6 ta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgc 44
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| |||
Sbjct: 70 attcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaactgag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||| |||||||||||||||||||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgc 91
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattg 44
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattg 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 68 attcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||||| || ||||||| |||||||| |||| ||| ||| ||||||||||
Sbjct: 91 attcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaacggag 150
Query: 110 gaagta 115
||||||
Sbjct: 151 gaagta 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
|||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattg 118
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||||| ||| |||||||||||||||||||| ||| ||| ||||||||||| ||
Sbjct: 97 attaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggag 156
Query: 114 tact 117
||||
Sbjct: 157 tact 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgc 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| ||||||| || ||| ||| |||| ||| ||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagacttt 35
|||| ||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacttt 34
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| ||||||||||||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||| |||||||||| ||||| |||| ||||||||||| ||||
Sbjct: 55 atatgaatgtgga-aatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcat 42
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 3 tatactccctccgtttcataatgtaagactttttagcat 41
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| ||||||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 67 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 126
Query: 110 gaagtac 116
| |||||
Sbjct: 127 ggagtac 133
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatt 95
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
|||||||||| ||||||||||||| |||||||||| ||||| ||| || ||||||||||
Sbjct: 84 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggaggaa 143
Query: 113 gta 115
|||
Sbjct: 144 gta 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
|||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||| |
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 113 gta 115
|||
Sbjct: 7 gta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| |||||||| | ||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 7e-12
Identities = 91/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 10 ccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctatatga 69
|||||||||||| |||||||| | |||||||||| | | ||||||||||||| |||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt-tcacattcattaacatcaatatgg 50
Query: 70 atgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||| |||||||||| ||||| ||| |||||||||||||||||
Sbjct: 49 atgtgaa-aatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 86 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||| |||||| ||||||||||||| |||||||||| | ||| ||| ||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatt 107
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 69.9 bits (35), Expect = 7e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 9 tccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||||||||||||||||||
Sbjct: 8 tccctccgtttcataatgtaagactttctagcatt 42
Score = 67.9 bits (34), Expect = 3e-11
Identities = 87/105 (82%), Gaps = 6/105 (5%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||||||||||||||| | | || |||| |||||||||||
Sbjct: 108 tacttcctccgtttcataatgtaagactttgtgtc------tagattcgttaacatctat 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||| ||| |||||||||||| ||| |||||||||||||||
Sbjct: 54 atgaatatggttaatgctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| ||||||||||||| |||||||||| ||||| |||| ||||||||||
Sbjct: 70 attcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatt 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| || | |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagtac 116
| |||||
Sbjct: 10 ggagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||| | |||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
|||||||||||| |||||||||| ||||| ||| | ||||||||||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagtact 147
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| || |||||||
Sbjct: 91 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggag 150
Query: 110 gaagtac 116
| |||||
Sbjct: 151 ggagtac 157
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||| | |||||||||| ||||| ||| || |||||||
Sbjct: 70 attcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtggaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||| || |||||||| | ||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatt 119
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| ||||||||||| | |||||||||| ||||| |||| ||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 93 attcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatt 121
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||| |||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| | ||||||||||||| ||| |||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctag 39
|||||||||||||||||| |||||||| | ||||||
Sbjct: 160 tatactccctccgtttcacaatgtaagtcattctag 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||||||| ||||| |||| ||||| |||| ||||||||||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatt 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 91 attcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaacggag 150
Query: 110 gaagtac 116
| |||||
Sbjct: 151 ggagtac 157
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| |||||||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 61 attcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggat 120
Query: 110 gaagta 115
||||||
Sbjct: 121 gaagta 126
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 128 tatacttcatccgtttcacaatgtaagactttctagcattgc 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 77 caatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatt 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||||||||||||| | | |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | |||||||||| ||||| ||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaa 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| |||||||| | ||||||||||
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattctagcatt 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| |||| ||| ||| |||||||||| ||||| ||| ||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacggag 140
Query: 110 gaagta 115
| ||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||| |||||||||| ||||| ||||||||||| |||
Sbjct: 70 attcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaacagag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||| ||||||||||||| ||||||| || ||||| ||||||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | || |||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatt 101
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||| | |||||||||| || ||||||||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcat 77
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| |||||||| || | |||||||||| ||||| ||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 120
Query: 110 gaagta 115
| ||||
Sbjct: 121 ggagta 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||| ||||||| |||||||||| ||||| |||| ||||||||||||||||
Sbjct: 56 atataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatat 51
|||||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaatactttatagcattgctcatat 50
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| || || ||||||||| || | ||| ||| ||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 110 gaagtac 116
|||||||
Sbjct: 132 gaagtac 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatat 51
|||| ||||||||||| |||||||||| || |||||||||| ||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 92
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 67.9 bits (34), Expect = 3e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||| ||||||||| |||||||||| ||||||||||||| ||| ||| ||||||||||
Sbjct: 75 attcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacggag 133
Query: 110 gaagta 115
||||||
Sbjct: 134 gaagta 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgc 45
|||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 141 tatacttcctccgtttcacaatgtaagactttctagcattgc 100
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||| | |||||| ||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 62 acatctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattg 44
|||||| ||||||||||| ||| |||| |||||||||||||
Sbjct: 3 tatacttcctccgtttcacaatctaagcctttctagcattg 43
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||| ||||||||||| |||||||||||| ||| ||| |||||| |||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgct 46
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgct 120
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||| |||||| |||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||| || || ||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| | | |||||||||| ||||| |||| || |||||||
Sbjct: 81 attcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacggag 140
Query: 110 gaagtac 116
|||||||
Sbjct: 141 gaagtac 147
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
||||||||||||||||||||||||| | |||||||||| | |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcat 54
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||| |||| || ||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 93 attcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 152
Query: 110 g 110
|
Sbjct: 153 g 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||| |||| ||||||||||| | || |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 7 actccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||||||| | ||||||||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| | ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacgga 108
|||||||| |||| ||||||||||||| |||| | ||| ||||| |||||||||||||
Sbjct: 93 attcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | |||||||||| ||||| ||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaa 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| |||||||| | || |||||||
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattatagcatt 109
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||||||||| |||||||||||| ||||||| ||| |||| | ||||||||
Sbjct: 69 attcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggag 128
Query: 110 gaagta 115
| ||||
Sbjct: 129 gtagta 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 9 tccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||| |||||||||||||||||||
Sbjct: 8 tccctccgtttcataatataagactttctagcattgc 44
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 70 atgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggagg 10
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| ||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||||||||||| | ||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcatt 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||| |||||||| ||| |||||||||| ||||| ||||||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| |||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacgga 108
||||||||||| ||||||||||||||| |||| ||||| ||||| |||||| ||||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 78 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 137
Query: 110 gaagta 115
||||||
Sbjct: 138 gaagta 143
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatat 51
|||||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 137 tactccctccgtttcataatgtaatactttatagcattgctcatat 92
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| || || ||||||||| || | ||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatat 51
|||| ||||||||||| |||||||||| || |||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 50
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||| || || ||||| ||||||||||||||
Sbjct: 81 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 140
Query: 110 gaagta 115
| ||||
Sbjct: 141 ggagta 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| | | |||||||||| ||||| |||| || |||||||
Sbjct: 70 attcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaag 122
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| ||| ||||||||||||| ||| |||||| ||||| |||| ||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||| ||||||||||||| |||| | ||| ||||| ||||||||||||||| ||||
Sbjct: 99 catcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggagggagta 155
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 155 tactccctccgtttcataatgtaag 131
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 72 gtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
|||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagtact 89
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgc 45
|||| ||||||||||||| | |||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgc 48
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 97 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 156
Query: 110 gaagta 115
| ||||
Sbjct: 157 ggagta 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatt 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||| || | |||||||||| ||||| ||| |||||||||||||||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| ||||||| || ||||| |||| ||||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggag 143
Query: 110 gaagta 115
| ||||
Sbjct: 144 ggagta 149
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||||||||| ||||| ||| |||||| |||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 124
Query: 110 gaagta 115
| ||||
Sbjct: 125 ggagta 130
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||||||||||| ||||||| || ||||| |||| |||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 114 ta 115
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 67.9 bits (34), Expect = 3e-11
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||||||||||||||||| | ||||||||| ||||||| | |||||| | | |||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatatagaattat 64
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|| ||||||| |||||||||||| ||| || ||||||||||||||||||
Sbjct: 65 ataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 60.0 bits (30), Expect = 7e-09
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||| | ||||||||||||||||| | ||| || | |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatataattctat 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| ||||||| |||| ||| || ||||||||||||| ||||
Sbjct: 54 atgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| | || |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacg 106
|||||||||||||||| ||||||||| || ||||||||| ||||| ||| |||||||
Sbjct: 90 tatattcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacg 149
Query: 107 gaggaagta 115
|||| ||||
Sbjct: 150 gagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||| ||||||||||| |||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcat 42
||||||||||||||||| |||||||| | |||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcat 122
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 69 aatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| |||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatt 121
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||||||| |||| ||||||| || |||||| ||| ||||||||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaag 134
Query: 114 ta 115
||
Sbjct: 135 ta 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 67 tgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||| ||| |||||| |||| ||| |||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| || ||||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 129
Query: 110 gaagta 115
||||||
Sbjct: 130 gaagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcatt 43
|||||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 139 tttatacttcctccgtttcacaatgtaagtcattctagcatt 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| ||| ||||| ||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||| ||||| |||||||| | ||||||||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| ||| ||| || ||||| |||| ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 110 gaagta 115
||||||
Sbjct: 125 gaagta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaag 30
||||||||||||||||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaag 29
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 130
Query: 110 gaagta 115
| ||||
Sbjct: 131 ggagta 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||| |||| |||||||||| ||||| ||| |||||||||||||||||
Sbjct: 56 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatt 99
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||| |||||| | |||||||||| ||||| ||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 114 t 114
|
Sbjct: 6 t 6
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| ||| |||||||||| ||||| ||| ||||||||||
Sbjct: 80 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 139
Query: 110 gaagta 115
| ||||
Sbjct: 140 ggagta 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatt 108
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 cctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||||| | ||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||||||||||||| ||| ||||| ||||| |||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 111 aagta 115
||||
Sbjct: 9 gagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| |||| |||||||| ||| |||||| ||||| ||| |||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 111 aagta 115
|||||
Sbjct: 147 aagta 151
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| |||||||||||| | ||||| || ||||| ||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 112 agta 115
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| |||||||||||| |||||||||| ||||| ||| |||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 112 agta 115
||||
Sbjct: 8 agta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||| |||||||| ||| |||||||||| ||||| ||| |||||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtac 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcatt 115
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| |||||||||||| | |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
||||||
Sbjct: 153 gaagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatt 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatt 42
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| ||| |||||||| |||||||||| ||||| ||| ||||||||||||
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggagga 9
Query: 112 agta 115
||||
Sbjct: 8 agta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||||||| | | |||||||||| ||||| |||| ||||||||||
Sbjct: 93 attcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatt 121
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||||| | ||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcatt 42
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| |||| |||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaag 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||| ||||| |||| ||||| ||||| ||||||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcattgcttatatt 52
|||||||||||||||||||||||||| | |||||||||| || |||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatatt 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 45 cttatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaa 104
|||| ||||| |||||||||||| ||| || | |||||||||| ||||| |||||||||
Sbjct: 75 cttagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaa 16
Query: 105 cggaggaagta 115
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||| ||||||||||||||| | || |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatt 121
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctag 85
|||||||||||| |||||||||||||||||||||||
Sbjct: 55 attcattaacatatatatgaatgtgggcaatgctag 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatg 81
|||||||||||| |||||||||||||||||||
Sbjct: 36 attcattaacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagactt 93
||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagactt 93
||||||||||||| ||||||||||| | |||||||||| |||||
Sbjct: 44 attcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||| ||| |||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
|||||||||||||||| |||||||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctag 125
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||||||||||| | |||||||||| |||| ||| |||||||||||||||||
Sbjct: 57 tatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtac 4
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 3 ttatactccctccgtttcataatgtaagactttctagcatt 43
||||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 133 ttatacttcctccgtttcacaatgtaagtcattctagcatt 93
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
||||| |||||||||||| |||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| |||||||||||| || ||||||| ||||| ||| |||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 112 agta 115
||||
Sbjct: 149 agta 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagc 40
|||||||||||||||| |||||||| | |||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagc 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||||| | ||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaagtcattctagcatt 42
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| |||| |||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 70 attcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
||||||||||||||||||||||||| | ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctag 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||| ||||| ||| |||||| ||||| ||||||||||||||
Sbjct: 93 attcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 95/114 (83%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcattgcttatattcattaacat-c 62
|||||||||||||||||| ||| |||| | |||||||||| | | |||||| || |
Sbjct: 3 tatactccctccgtttcacaatataagtcattctagcatttcccacattcatattgattc 62
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatg-aaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| || ||||||||||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||| | |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 48 atattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacgg 107
|||| |||| ||||| |||||||| |||| |||||||||| ||||| ||| ||||||||
Sbjct: 75 atatccattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgg 134
Query: 108 aggaagta 115
||||||||
Sbjct: 135 aggaagta 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatt 105
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagactt 93
||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 44 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagactt 93
||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||| ||| |||||||||| ||||| ||| ||||||||||
Sbjct: 69 attcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggag 128
Query: 110 gaagtact 117
||||||||
Sbjct: 129 gaagtact 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcatt 42
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 57 tatatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcatt 97
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||||||||||||||||||||| |||||||||||
Sbjct: 46 attcattaacatctatatgaatgtgggtgatgctagaaag 7
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||| ||||||||||||||||| | |||||||||||
Sbjct: 69 attcatttacatctatatgaatgtgtgtgatgctagaaag 108
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| |||| ||||| | ||| ||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 110 gaagta 115
||||||
Sbjct: 125 gaagta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||| ||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatt 93
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||||| ||||||||| ||||| ||||||| ||| |||| ||||||||||| ||
Sbjct: 63 attaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacggagggag 122
Query: 114 tac 116
|||
Sbjct: 123 tac 125
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 60 atctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtact 117
||||| ||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||
Sbjct: 60 atctaaatgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagtact 3
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttcta 38
|||||||||||||||| ||| ||||||||||||
Sbjct: 124 tactccctccgtttcacaatataagactttcta 92
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||| |||||||| ||||| | || ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||||| |||||||||| ||||| ||| ||| ||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||| ||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 2 tttatactccctccgtttcataatgtaagactttctagcatt 43
|||||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 1 tttatacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||| ||||| | ||||||| || ||||| ||| ||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatt 121
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattg 44
||||| |||||||||| ||||||||||||||||||||||
Sbjct: 94 tactctctccgtttcacaatgtaagactttctagcattg 56
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 gtttcataatgtaagactttctagcattg 44
|||||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattg 43
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatt 58
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| ||||||||||||| ||||||| || ||||| ||| ||||||||||
Sbjct: 70 attcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||| |||||||| ||||||| || ||||| || ||||||||||
Sbjct: 93 attcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacggag 152
Query: 110 gaagtac 116
|||||||
Sbjct: 153 gaagtac 159
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||| ||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatt 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatt 42
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| ||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaag 30
|||||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaag 112
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | ||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatt 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 70 atgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||||||||| ||||| ||||||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||| |||||| | |||| ||||| ||||| |||||||||||| |||||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagtac 4
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
|||| ||||||||||||| ||||||| || ||||| ||| |||||||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatatt 52
|||||||||||||||| |||||||| | |||||||||| || |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatt 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||| ||| || | |||||||||| ||||| ||| ||||||||||| ||
Sbjct: 84 attaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacggagggag 143
Query: 114 ta 115
||
Sbjct: 144 ta 145
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||||||| |||| ||| |||||| ||||| ||||||||||||||
Sbjct: 71 attcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggag 130
Query: 110 gaagta 115
| ||||
Sbjct: 131 ggagta 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
||||||||||||||||||||||||| | ||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctag 103
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| | |||| |||||||| |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagta 115
| ||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||| |||||||||| ||||| |||| || |||||||
Sbjct: 93 attcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacggag 152
Query: 110 gaagtac 116
| |||||
Sbjct: 153 ggagtac 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 114 ta 115
||
Sbjct: 6 ta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||||||||||| ||| |||||| ||||| |||||||||| |||| ||
Sbjct: 83 attaacatcactatgaatgtgggaaatactagaatgacttacattatgaaacagagggag 142
Query: 114 tac 116
|||
Sbjct: 143 tac 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
||||||||| ||||||||||||||| | ||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctag 111
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| ||||||||||| | |||||||||| ||||| ||| |||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacggag 11
Query: 110 gaagta 115
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||||| |||| ||| |||| |||| ||||| ||||| ||| ||||||||||
Sbjct: 92 attcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaacggag 151
Query: 110 gaagta 115
| ||||
Sbjct: 152 ggagta 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||| ||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatt 120
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||||||||| |||||||||||| ||||||| || ||||| ||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 112 agtact 117
||||||
Sbjct: 8 agtact 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatt 42
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| |||| |||||| ||| ||||| ||| ||||||||||
Sbjct: 91 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 150
Query: 110 gaagta 115
| ||||
Sbjct: 151 ggagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatt 119
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||| ||||||||||| | |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||| ||||||||||||| |||||||||| | ||| ||| ||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatt 95
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 54 attaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaag 113
||||||||| |||||||||| || ||| ||||| ||||| |||| ||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 114 ta 115
||
Sbjct: 137 ta 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||| | | |||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggag 11
Query: 110 gaagtact 117
| ||||||
Sbjct: 10 ggagtact 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactt 34
|||||||||||||||||||||||||||||
Sbjct: 112 tactccctccgtttcataatgtaagactt 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 56 taacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||| |||||||||| | || ||||||| ||| ||||| ||||||||||||||
Sbjct: 64 taacatctagatgaatgtggaaagtgttagaaagtcttacattataaaacggaggaagta 5
Query: 116 ct 117
||
Sbjct: 4 ct 3
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttcta 38
|||| ||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttttataatgtaagactttcta 37
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||| ||||| ||||||||||| | |||||||||| ||||| ||| ||||||||||
Sbjct: 93 attcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 110 g 110
|
Sbjct: 153 g 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 tccctccgtttcataatgtaagactttctagcatt 43
||||||||||||| |||||||| | ||||||||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatt 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 tccctccgtttcataatgtaagactttctagcat 42
||||||||||||| |||||||| | |||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagactt 93
|||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagactt 93
|||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||||||||| ||||||| || ||||| ||| |||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 51 ttcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||| |||||||| |||||||||| ||||| ||| |||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 111 aagta 115
||||
Sbjct: 117 gagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 123 tatactccctccgtttcacaatctaagtcattctagcatt 84
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||| |||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 86 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctaga 86
||||||||||||| ||||||||||||| |||| ||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatt 100
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||| ||| ||||||||||||||||||||||||||
Sbjct: 49 attcattagcatagatatgaatgtgggcaatgctagaaag 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||| ||||||||||||||||||||||| |||||||
Sbjct: 72 attcatttgcatctatatgaatgtgggcaatgttagaaag 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 aatgtaagactttctagcattgc 45
|||||||||||||||||||||||
Sbjct: 1 aatgtaagactttctagcattgc 23
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 98 attcattaacttctatgtgaatgtgggcaatgctggaaag 137
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaa 88
|||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 44 attcattaacttctatgtgaatgtgggcaatgctggaaa 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 atatgaatgtgggcaatgctagaaag 89
|||||||||||||||||||| |||||
Sbjct: 51 atatgaatgtgggcaatgctggaaag 76
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagactt 93
|||||||| |||| ||||||||||||| |||||||||| |||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaa 87
|||||||| |||| ||||||||||||| ||||||||||
Sbjct: 47 attcattagcatcaatatgaatgtgggaaatgctagaa 84
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 52 tcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagga 111
||||| ||||| |||| |||||| | |||||||||| ||||| |||| | ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 112 agta 115
||||
Sbjct: 90 agta 93
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 56 taacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| || |||||||||| |||||||||| |||| |||| ||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 128 tatacttcctccgtttcacaatgtaagtcattctagcatt 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| ||||| ||| ||||||||||||||||
Sbjct: 89 aatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 42 attcattaacttctatgtgaatgtgggcaatgctggaaag 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaa 88
|||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 96 attcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 64 atatgaatgtgggcaatgctagaaag 89
|||||||||||||||||||| |||||
Sbjct: 89 atatgaatgtgggcaatgctggaaag 64
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| |||||||| | ||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatt 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 63 tatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||| |||||||| |||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 57 tatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 69 aatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||| |||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctag 39
||||||||||||||||| |||||||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctag 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||| ||| ||||||||||||| ||| |||||| | ||| ||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggag 152
Query: 110 gaagta 115
| ||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctag 39
|||||||||||||||| |||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 47 tatattcattaacatctatatgaatgtgggcaatgctagaaagactt 93
||||||||||| |||| ||||||||||| | |||||||||| |||||
Sbjct: 52 tatattcattagcatcaatatgaatgtgagaaatgctagaatgactt 6
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtatt 98
|||||||| |||| ||||||||||| | |||||||||| ||||| ||||
Sbjct: 60 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatatt 108
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcat 42
|||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 3 tatactccctccgtttcacaatataagactttttagcat 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 90/110 (81%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgcttatattcattaacatctat 65
|||| ||||||||||||||||||||| ||| |||||| | |||||| | || |||||
Sbjct: 113 tacttcctccgtttcataatgtaagattttttagcatcgtctatattta-tatagtctat 55
Query: 66 atgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|| ||| ||| | |||||| |||| ||| |||| ||||||||||| ||||
Sbjct: 54 ataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacgga 108
||||||||||||| ||||||||||| | |||| ||||| ||||| ||| |||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||| |||| | ||||||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcatt 42
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcattgctta 48
|||||||| |||||||||||||||| | |||||||||| ||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttctta 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| ||||| |||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttatattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 61 tctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||| || |||||||| ||||| ||| || |||||||| |||||||||
Sbjct: 59 tctatatgaatatgtgcaatgcttgaaagtcttatagtatgaaacagaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| | |||||||||| ||||||
Sbjct: 130 tactccctccgtttcatactataagactttcaagcatt 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaag 89
||||| ||||||||||||| ||||||||||| |||||
Sbjct: 96 cattagcatctatatgaatatgggcaatgcttgaaag 60
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||| ||| || | ||| |||||| ||||| |||| ||||||||||
Sbjct: 70 attcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||||||||||| | || |||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatt 91
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 57 aacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||||| |||||||| ||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 tatactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 3 tatactccctccgtttcacaatgtaagttattctagcatt 42
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 56 taacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||| |||||||||||| |||||||||| |||| ||| ||||||||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatt 94
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 5 atactccctccgtttcataatgtaagactttctag 39
|||||||||||||||||||||||||| | ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctag 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||| ||||||||| |||| | ||||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcatt 102
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 53 cattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaa 112
||||||||| |||| |||||| | |||||||||| ||||| ||| |||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 113 gta 115
|||
Sbjct: 7 gta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| ||||||||||| | ||| ||| || ||||| ||| ||||||||||
Sbjct: 82 attcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggag 141
Query: 110 gaagtac 116
| |||||
Sbjct: 142 ggagtac 148
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 70 atgtgggcaatgctagaaagacttgtattatgaaacggaggaagtac 116
||||||| |||||||||| ||||| ||| ||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 atactccctccgtttcataatgtaagactttctagcatt 43
||||||||||||||||| ||||||| | ||||||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcatt 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 78 aatgctagaaagacttgtattatgaaacggaggaagta 115
|||||||||| |||||| ||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 72 gtgggcaatgctagaaagacttgtattatgaaacggaggaagtactg 118
||||| |||||||||| ||||| ||| ||||||||||| |||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagtactg 2
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcataatgtaagactttctagcatt 43
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 50.1 bits (25), Expect = 7e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 59 catctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
|||| ||||||| ||||| |||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||| |||||| ||| | | ||| |||||| ||||| |||| ||||||||||
Sbjct: 74 attcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaacggag 133
Query: 110 gaagta 115
||||||
Sbjct: 134 gaagta 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 65 tatgaatgtgggcaatgctagaaagacttgtattatgaaacggaggaagta 115
||||||||||| ||| |||||| ||||| ||| ||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||| |||||||||||| ||| ||||| ||||| ||| ||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggag 151
Query: 110 gaagta 115
| ||||
Sbjct: 152 ggagta 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgtttcataatgtaag 30
|||||||||||||||||| ||||||||
Sbjct: 159 tatactccctccgtttcacaatgtaag 133
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| |||| ||||||| ||||||| || ||||| |||| ||||||||||
Sbjct: 87 attcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacggag 146
Query: 110 gaagta 115
| ||||
Sbjct: 147 ggagta 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||| |||| || | |||||| | ||||||| || ||||| ||| ||||||||||
Sbjct: 70 attcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 110 gaagtac 116
|||||||
Sbjct: 10 gaagtac 4
