miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 134/146 (91%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| ||||||||||| |||||||| ||||||||| |||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 93 tctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctagg 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggaggga 8
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||| ||| ||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| | || | | |||||||||||||||||| || ||||||||||||||| || |
Sbjct: 70 tctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaa 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 192 bits (97), Expect = 9e-49
Identities = 136/149 (91%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 67 gaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| |||||||||||| |||||||||||||
Sbjct: 127 aaaaagtcttacattatgaaacggaggga 155
Score = 151 bits (76), Expect = 3e-36
Identities = 127/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | ||||||||||| || ||||| ||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| | || | | |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 93 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 135/149 (90%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||||||||| |||||||||||||||| |||||||||||| ||| ||
Sbjct: 67 gaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggaggga 155
Score = 159 bits (80), Expect = 1e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||||| | || | |||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 93 tctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 135/149 (90%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 156 cttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | ||||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 96 gaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| |||||||||||| |||||||||||||
Sbjct: 36 aaaaagtcttacattatgaaacggaggga 8
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | ||||||||||| || |||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| | || | | |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 70 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 130 aagtcttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 132/146 (90%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||||||||| ||||||| ||||||||||||| |||||||| |||||| | |||||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggaggga 8
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| | || ||| |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| || ||| || | |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| ||||||| |||| |||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||| |||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 67 gaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggaggga 155
Score = 151 bits (76), Expect = 3e-36
Identities = 127/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| |||| | |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 93 tctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||| ||||||| |||||||||||
Sbjct: 33 aagacttacattatgaaacggagg 10
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 3e-42
Identities = 131/146 (89%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| |||| ||| |||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||||||||| ||||||| ||||||||||||| |||||||| |||||| | |||||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 33 aagtcttacatggtgaaacggaggga 8
Score = 131 bits (66), Expect = 3e-30
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| || |||||||||||||| | || ||| |||||||||||| ||||||||
Sbjct: 10 cctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| || ||| || | |||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaatactaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
||||||||||| ||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 170 bits (86), Expect = 3e-42
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 77
||||||||||| || ||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct: 139 tgtaagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatg 80
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct: 79 tgtgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattat 20
Query: 138 gaaacggagg 147
||||| ||||
Sbjct: 19 gaaaccgagg 10
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
||||||| |||| | | |||||||||||||| | ||| ||||||||||||| || |||||
Sbjct: 7 cttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||| | || | ||| |||||||||| | ||| ||||||||||||||||||||
Sbjct: 67 gaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| |||||||||||| |||||| ||||||
Sbjct: 127 aaaaagtcttacattatgaaaccgaggga 155
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 133/149 (89%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| |||||| |||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||||||| ||| | ||||||||||||||| |||| | |||||| |||||||||||
Sbjct: 67 gaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
Score = 159 bits (80), Expect = 1e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| ||||| ||| |||||| ||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||| | ||||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 93 tctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 167 bits (84), Expect = 5e-41
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||||||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 2 taagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtg 61
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| |||||||||||||||| |||||||||||| || | ||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacataca 54
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 53 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtctta 2
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 163 bits (82), Expect = 8e-40
Identities = 130/146 (89%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| ||||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||| | |||| | ||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | | |||||||||||| |||||||||||||||| |||| ||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
||||||| |||| | | |||||||||||||| | ||| ||||||| |||||||| ||||
Sbjct: 7 cttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatactaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||
Sbjct: 67 gaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggaggga 155
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| ||||||||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| || | || | ||||||||||||||| ||| |||| ||||||||||| ||||||
Sbjct: 93 tctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||| ||||
Sbjct: 33 aagtcttacattatgaaacagagg 10
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 161 bits (81), Expect = 3e-39
Identities = 108/117 (92%)
Strand = Plus / Minus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 77
|||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||
Sbjct: 118 tgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatg 59
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 134
|||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 tgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacat 2
Score = 105 bits (53), Expect = 2e-22
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 77
|||||||||||||| ||||| |||||||||||| || ||||||||||| || | ||
Sbjct: 3 tgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacata 62
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 134
| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 63 tatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacat 119
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||| |||| || | |||||||||||||||| ||||||||| ||||||||||
Sbjct: 67 gaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
Score = 159 bits (80), Expect = 1e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| ||||| || ||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | ||| ||||||||||||||||| |||| || ||||||||||||||||||||
Sbjct: 93 tctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| ||| |||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||| | ||| | |||||||||||||||| ||||| | ||||||||| ||
Sbjct: 67 gaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatact 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| |||| |||| | ||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||| | ||| | |||||||||||||||||||| | |||||| ||||||||||||||
Sbjct: 93 tctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| ||||||||| || ||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||| ||||| |||||||||||||||||| | | ||||||||||| |||||||||
Sbjct: 93 tctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| |||| |||||||||| ||| | |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||| | | | | | |||||||||||||||| ||||| || ||| |||||||
Sbjct: 67 gaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 159 bits (80), Expect = 1e-38
Identities = 134/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtcta--gattcattaacatcaatatgaatgtgggcaatg 118
||||||| | |||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 67 gaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatg 126
Query: 119 ctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||| | |||||||||||||
Sbjct: 127 ctagaaagtcttataatatgaaacggaggga 157
Score = 117 bits (59), Expect = 4e-26
Identities = 101/114 (88%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatata--tg 77
|||||||||||| ||||| |||||||||||||||| |||||||||||| ||| | | |
Sbjct: 139 taagactttctagcattgcccacattcatatagatgttaatgaatctatacacacacata 80
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
| | | |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 79 tatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 156 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgctaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||| ||||| ||| |||||||||||| |||||| |||||||||||||
Sbjct: 96 gaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
||||||||||| | |||||||||||||
Sbjct: 36 agaaagtcttataatatgaaacggaggga 8
Score = 135 bits (68), Expect = 2e-31
Identities = 101/112 (90%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| ||||| |||||||||| |||||||| ||| ||| |||| |
Sbjct: 26 taagactttctagcattgcccacaatcatatagatgttaatgaacctatacacatatata 85
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||||||||| || ||||| ||| |||||| ||||| |||||
Sbjct: 156 cttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||| | ||||| ||||||||||||| || ||||| || || ||||||||
Sbjct: 96 gaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 36 agaaagtcttacattgtgaaacggaggga 8
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||||| ||| | |||||||||||||||||||| | |||||| |||||||||||| |
Sbjct: 70 tctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaa 129
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||| | | ||||| |||||||||||||||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| || ||||| | || |||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 93 tctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | | ||||| ||||||||||||
Sbjct: 33 atgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | |||||| ||| |||||||||||| ||| |||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || |||||||| | | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 gaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggga 8
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | |||||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 70 tctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 151 bits (76), Expect = 3e-36
Identities = 128/144 (88%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
||||||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 92 tctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 129 bits (65), Expect = 1e-29
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| || ||| | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgct 125
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 126 agaatgacttacattgtgaaacggaggga 154
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70 tctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | ||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 96 gaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 151 bits (76), Expect = 3e-36
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| ||||||||||||| || |||||||||||| | |||||| ||
Sbjct: 2 taagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatatg 61
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 135 bits (68), Expect = 2e-31
Identities = 101/112 (90%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| |||||||||||||||| |||||||||||| || |||| |
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatata 54
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 53 tatctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 2
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||||||||| ||| |||| | |||||||| ||||| |||||
Sbjct: 7 cttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || |||||| | |||| |||||||||||||||| ||||| ||||| ||||||||
Sbjct: 67 gaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggagg 147
|||||||||||||| ||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagg 153
Score = 125 bits (63), Expect = 2e-28
Identities = 126/147 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| ||||| ||||||||| |||||
Sbjct: 156 cttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||||||| || | |||||| ||||||||||||| | |||||||| |||||| |
Sbjct: 96 gaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaatatt 37
Query: 121 agaaagtcttacatcgtgaaacggagg 147
| |||||||||||| || |||||||||
Sbjct: 36 aaaaagtcttacattgtaaaacggagg 10
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||| | | | ||||| |||||||||||| |||||||| |||||||| |||||
Sbjct: 93 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
|||||||| || |||||||||||||
Sbjct: 33 aagtcttatattatgaaacggaggga 8
Score = 131 bits (66), Expect = 3e-30
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| |||| ||| |||||||||||| |||||||| ||| | ||||| |
Sbjct: 26 taagactttctagtattgcccatattcatatagatgttaatgaacctagatatatacata 85
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| |||||||||||| |||| ||| |||||||||||| ||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtga 145
Query: 140 aacggaggga 149
||||||||||
Sbjct: 146 aacggaggga 155
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||| | | | ||||| |||||||||||| |||||||| |||||||| |||||
Sbjct: 70 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
|||||||| || |||||||||||||
Sbjct: 130 aagtcttatattatgaaacggaggga 155
Score = 131 bits (66), Expect = 3e-30
Identities = 114/130 (87%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| |||| ||| |||||||||||| |||||||| ||| | ||||| |
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaacctagatatatacata 78
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| |||||||||||| |||| ||| |||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtga 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||||||||| || ||| | ||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||||||||||||| | | |||||||||| ||||||||| | ||| ||||||||||||||
Sbjct: 67 gaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| ||||| |||||| ||| ||||| ||||| ||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||||||| | ||| |||||||||||||||| | ||||||| || ||| ||| |
Sbjct: 93 tctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaatactata 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 143 bits (72), Expect = 8e-34
Identities = 102/112 (91%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgta 54
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|| |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 53 tgcctagattcattaacatatatatgaatatgggcaatgctagaaagtctta 2
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| ||| ||||||||| || |||||||||||| |||| || |
Sbjct: 2 taagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatata 61
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 154 cttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaat 95
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||| || | |||||||||||||||||||||||||| | |||||||||
Sbjct: 94 gaatctagacacgcatatac--ctagattcattaacatcaatatgaatataggcaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggaggga 8
Score = 129 bits (65), Expect = 1e-29
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| | | |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 70 tctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaatgctaga 127
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 128 aagtcttacattatgaaacggagg 151
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||||||||| || ||||||||||||| || ||||| |||||
Sbjct: 154 cttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatattaat 95
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | |||| | ||| |||||||||||||||||| |||| |||||| ||||| |
Sbjct: 94 gaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatggt 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggaggga 8
Score = 113 bits (57), Expect = 7e-25
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctaccattgtccacat--atatagatgttaatgaa 67
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | ||| | | |||||||||||||| ||| | || ||||||| |||||||| |
Sbjct: 68 tctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatgctaaa 127
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 128 aagtcttacattgtgaaacggagg 151
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 137 bits (69), Expect = 5e-32
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | ||||||||||| || ||||| | |||||| ||||| ||||||||
Sbjct: 151 cctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgttaatgaa 92
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 91 tctagacatat--gtgtgtctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||| ||||||| |||||||||||
Sbjct: 33 aagacttacattatgaaacggagg 10
Score = 123 bits (62), Expect = 7e-28
Identities = 128/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| ||||||| ||||| |||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||| | | | |||||||||||||||||||| | |||||| | ||||||||
Sbjct: 67 gaatctagacacaca--tatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| |||||||||||| |||||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggaggga 153
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| ||||| |||||| ||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || | ||| ||||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 67 gaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||||||||||||
Sbjct: 127 agaatgacttacattatgaaacggaggga 155
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| ||| |||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| | || | | |||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 93 tctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| |||||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 137 bits (69), Expect = 5e-32
Identities = 129/148 (87%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
|||| |||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||||
Sbjct: 10 cctctgtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaac--atcaatatgaatgtgggcaatgcta 121
||||||||||| | ||||| ||||||||||||| || ||||| ||||| |||||||||
Sbjct: 70 tctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaatgcta 129
Query: 122 gaaagtcttacatcgtgaaacggaggga 149
|||||||||||| ||||||||||||||
Sbjct: 130 aaaagtcttacattgtgaaacggaggga 157
Score = 121 bits (61), Expect = 3e-27
Identities = 127/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt--taatg 61
||||||||| ||| ||||||||||| || ||||| ||||| |||||| || | |||||
Sbjct: 155 cctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgttaatg 96
Query: 62 aatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgcta 121
|||||||||| ||| | ||| |||||||||||||||| | ||||||||||| |||||||
Sbjct: 95 aatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaatgcta 36
Query: 122 gaaagtcttacatcgtgaaacggaggga 149
||||||||||||| ||||||| ||||||
Sbjct: 35 gaaagtcttacattgtgaaacagaggga 8
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | ||||||||||| || |||| |||||||||||||||| ||||
Sbjct: 7 cttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgctaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||||| | ||||| ||||||||||||||| |||| |||||||||||||||||| |
Sbjct: 67 aaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatgtt 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||| | | | | |||||| |||| |||| ||||||||||||| ||||||| |
Sbjct: 93 tctagacattattatatatatagatttattagcatctatatgaatgtgggtaatgctata 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| |||||||||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||||||| ||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | |||||||||||||||||| ||||||||||||||| ||| ||
Sbjct: 67 gaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatact 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| ||| |||||||||||| | | ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||||||||||||||||||||| |||||| |||||||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 113/128 (88%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
||||||||||| ||||| ||||||||||||| || ||||| |||||| |||||||| ||
Sbjct: 26 taagactttctggcattgcccacattcatatatatgttaataaatctagacatatatatg 85
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|| | |||||||||||||| ||||||||||||||||||||||||||||||| | | |||
Sbjct: 86 tgccaagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttga 145
Query: 140 aacggagg 147
||||||||
Sbjct: 146 aacggagg 153
Score = 119 bits (60), Expect = 1e-26
Identities = 111/128 (86%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| ||||||||||||| || ||||||||||| || |||| |
Sbjct: 137 taagactttctagcattgcccacattcatatatatgttaatgaatcttggcacatatata 78
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||| |||||||| ||||||||||||||||||| ||||||||||| | | |||
Sbjct: 77 tgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataacttga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||||||||| | | | | |||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| ||||| |||||||||||||||| | ||||||||||| |||||||||
Sbjct: 93 tctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||| ||| |||||||||||
Sbjct: 33 aagtcttgcattatgaaacggagg 10
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | || ||||||||||| |||| |||||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||||||| |||| | |||||||||||||||||||| || | | | ||||||| |
Sbjct: 67 gaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatgtt 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 126/146 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | |||||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 93 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 131 bits (66), Expect = 3e-30
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 70 tctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
||||||||||| ||| |||||| | ||||| |||| || |||||||||| ||| |||||
Sbjct: 7 cttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || |||||||| ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatgtagacatatatatgt--ctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||| ||||||||||
Sbjct: 125 agaatgacttacattgtggaacggaggga 153
Score = 105 bits (53), Expect = 2e-22
Identities = 122/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
|||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 151 cctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 92
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| ||| ||| |||||||||||||||||||||||| | |||||||||
Sbjct: 91 tctagacatatatatgt--ctacattcattaacatcaatatgaatgtagaaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||| ||||||||
Sbjct: 33 atgacttacattgtggaacggagg 10
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 131 bits (66), Expect = 3e-30
Identities = 102/114 (89%)
Strand = Plus / Minus
Query: 19 gtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgt 78
||||||||||||| ||| ||||||||||||||| | |||||||||| |||||||| |
Sbjct: 114 gtaagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatat 55
Query: 79 gtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttac 132
||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 54 gtgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtcttac 1
Score = 115 bits (58), Expect = 2e-25
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 19 gtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgt 78
||||||||||||| ||| |||||||||||||||| |||||||||||| ||| |||| |
Sbjct: 1 gtaagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Query: 79 gtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttac 132
|||||||||||||| ||||| ||||||||||| | |||||||||||||||||
Sbjct: 61 atgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtcttac 114
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||||||||| ||||||||||||| || | |||
Sbjct: 7 cttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||| ||||| |||||||||| ||||| ||||||| ||| |||| ||
Sbjct: 67 gaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaattct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
||||||||||| | |||||||||||||
Sbjct: 127 agaaagtcttataatatgaaacggaggga 155
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| |||||||| ||||||||||| | |||||||||||||| |||| |
Sbjct: 137 taagactttctagaattgtccatcttcatatagatgtcaatgaatctaaacacatatata 78
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct: 77 tgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtctta 26
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| ||||| |||||| |||||||| |||||
Sbjct: 156 cttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || | ||| ||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 96 gaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||||||||||||
Sbjct: 36 agaatgacttacattatgaaacggaggga 8
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| | |||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| | || | | |||| ||||||||||||| |||| |||||||||||||||||
Sbjct: 70 tctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| |||||||||||
Sbjct: 130 atgacttacattatgaaacggagg 153
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||||||||||||| |||||||||||||| ||||||| |
Sbjct: 93 tctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaa 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || || |||| |||||||||||| | |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | ||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 67 gaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
|||||||||||| ||| ||||||||||| |||||||| | | ||||||||||||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatatctatctagattcattaacaa 59
Query: 99 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 99.6 bits (50), Expect = 1e-20
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| | | ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | ||||||||||||||| |||||||||||||||||| |||| | ||
Sbjct: 70 tctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtgga 129
Query: 124 aagtcttacatcgtgaaacgga 145
| | ||||||| |||||||||
Sbjct: 130 atgacttacattatgaaacgga 151
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 108/123 (87%)
Strand = Plus / Minus
Query: 27 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 86
||||| |||| | ||||||||||| ||| |||||||||||||| | |||| | |||||||
Sbjct: 130 ttctagcatttttcacattcatattgatattaatgaatctaaatagatatatatgtctag 71
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||||||| |||||| |||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 147 gga 149
|||
Sbjct: 10 gga 8
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||| |||| | | ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | | |||||||||||| ||||||||||||||| |||||||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | |||| || ||| ||||||||||
Sbjct: 130 atgacttatattgtggaacggaggga 155
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 125 bits (63), Expect = 2e-28
Identities = 115/131 (87%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| |||||||||||||||| |||||||||||| | |||| | |
Sbjct: 138 taagactttctagcattgcccacattcatatagatgttaatgaatctagatatatgtagg 79
Query: 80 tgtctagattca-ttaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtg 138
|||||||||| | |||||||| ||||||||||||| ||||||||||||||||| | ||
Sbjct: 78 tgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatg 19
Query: 139 aaacggaggga 149
|||||||||||
Sbjct: 18 aaacggaggga 8
Score = 109 bits (55), Expect = 1e-23
Identities = 113/131 (86%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaa-tgaatctaaacatatatgt 78
|||||||||||| |||| |||||||||||||||| |||| | |||||| ||| || |
Sbjct: 26 taagactttctagcattacccacattcatatagatgttaaattaatctagacacctacat 85
Query: 79 gtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtg 138
| |||||||||||||||||| ||||||||||||||||||||||||||||||| | ||
Sbjct: 86 atatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctg 145
Query: 139 aaacggaggga 149
|||||||||||
Sbjct: 146 aaacggaggga 156
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||||| || ||||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | | |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 67 gaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | |||| || ||||||||||||||
Sbjct: 127 agaatgacttatattgtgaaacggaggga 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | |||||| | | ||||||||||||||||| ||||||||||||| || | ||||
Sbjct: 93 tctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaagttaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || | |||| ||||||| |||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||| | | |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 67 gaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||| |||||||||
Sbjct: 127 agaatgacttacattgtgatacggaggga 155
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||| | ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 153 cctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | ||||||||||||||||||||||||| |||||||| ||||| | |
Sbjct: 93 tctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaa 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 126/149 (84%), Gaps = 9/149 (6%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatgct 117
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 118 agaatgacttacattgtgaaacggaggga 146
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 121 bits (61), Expect = 3e-27
Identities = 91/100 (91%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 34 attgtccacattcatatagattttaatgaatctaaacata--tatgtgtgtctagattca 91
|||| |||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 92 ttaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||| ||||||||||||||||| |||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtctta 26
Score = 113 bits (57), Expect = 7e-25
Identities = 90/100 (90%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacata--tatg 77
|||||||||||| |||| |||||||||||||||| |||||||||||| ||| | ||||
Sbjct: 26 taagactttctagaattgcccacattcatatagatgttaatgaatctatacacacatatg 85
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaat 117
||||| |||||||||||||||| |||||||||||||||||
Sbjct: 86 tgtgtatagattcattaacatctatatgaatgtgggcaat 125
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | || || |||| |||||||||||| || |||||
Sbjct: 156 cttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 gaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | ||||||| ||||||||||||||
Sbjct: 36 ataatgacttacattgtgaaacggaggga 8
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | || || |||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||||||| |||||||||||||| ||||||| |
Sbjct: 70 tctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaa 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 130 atgacttatattgtgaaacggagg 153
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 74 tatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttaca 133
|||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca 121
Query: 134 tcgtgaaacggaggga 149
| ||||||||||||||
Sbjct: 122 ttgtgaaacggaggga 137
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||| ||
Sbjct: 135 cctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaa 76
Query: 64 tcta 67
||||
Sbjct: 75 tcta 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||| |||||||| ||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 114/132 (86%)
Strand = Plus / Plus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 77
|||||| | |||||||||| |||||||||||||| | |||||||||||| | ||||||
Sbjct: 24 tgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatatata 83
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
|||||||||||||||||| | |||||||||||| |||||||||| | ||||||| ||
Sbjct: 84 gatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgt 143
Query: 138 gaaacggaggga 149
||||||||||||
Sbjct: 144 gaaacggaggga 155
Score = 109 bits (55), Expect = 1e-23
Identities = 112/131 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||||| | ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||| ||| | | |||||||||||||||| | ||||||||||||| |||| ||||
Sbjct: 93 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 34
Query: 124 aagtcttacat 134
| | |||||||
Sbjct: 33 atgacttacat 23
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| |||||||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||| ||||||||||||||| | |||||||||
Sbjct: 93 tctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| |||| ||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | ||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 67 gaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgtt 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 117 bits (59), Expect = 4e-26
Identities = 125/149 (83%), Gaps = 11/149 (7%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 67 gaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatgct 115
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||||||
Sbjct: 116 agaaagtcttacattatgaaacggaggga 144
Score = 115 bits (58), Expect = 2e-25
Identities = 121/144 (84%), Gaps = 11/144 (7%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| |||||| ||||||||| ||||||||
Sbjct: 142 cctccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaa 83
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 82 tcta-----------gtgtctagattcattaacatctaagtgaatgtgagcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| ||||||||||| || || ||||||||||| |||| |||||||| | | |||| ||||
Sbjct: 93 tttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 107 bits (54), Expect = 4e-23
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| || | |||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| || |||| | ||| || |||||||| |||| |||||||||||| |||||||||
Sbjct: 70 tctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 76 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatc 135
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 81 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 22
Query: 136 gtgaaacggaggga 149
|||||||||||||
Sbjct: 21 atgaaacggaggga 8
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggga 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 69
Query: 64 t 64
|
Sbjct: 70 t 70
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | || || |||| ||||||||||||| || ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| || | |||| | |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70 tttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||| ||| ||||| || ||||||||||||| ||||||| |
Sbjct: 93 tctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctata 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||| ||| ||||||||||||| ||| ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaa 93
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtggg 113
|||| |||||||| | | |||||||||||||| |||||||||||||||||
Sbjct: 92 tctagacatatatatctatctagattcattaatatcaatatgaatgtggg 43
Score = 109 bits (55), Expect = 1e-23
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
|||||||||||| ||| |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 44 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 103
Query: 99 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| ||| ||||| | ||||||| ||||||||||||||
Sbjct: 104 caatatgaatgtggaaaatattagaatgacttacattgtgaaacggaggga 154
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 121/142 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| || | |||||| | ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtaga 34
Query: 124 aagtcttacatcgtgaaacgga 145
| | ||||||| ||||||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 6 tccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaatc 65
||||||| ||| |||||| | ||||| |||| ||||||||||| ||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 66 taaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaa 125
|| | | |||| | |||||||||||||||| ||||| |||||| | | ||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 126 gtcttacatcgtgaaacggaggga 149
| ||||||| ||||||||||||||
Sbjct: 132 gacttacattgtgaaacggaggga 155
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||||||| || |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||| |||||| |||||||||||||||||||| ||||||||||| | |||| || |
Sbjct: 93 tctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaa 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | |||||| ||||||||||||||
Sbjct: 33 atgacttacaatgtgaaacggaggga 8
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Plus
Query: 40 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 99
||||||||||||||| |||||||||||| |||| ||| | | | ||||||||| ||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatc 105
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 106 tatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
|||||||||||| ||| |||||||||||||| | |||| | |||||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 33
Query: 99 caatatgaatgtgggcaatgctagaa 124
||||||||||||||| ||||||||||
Sbjct: 32 caatatgaatgtgggaaatgctagaa 7
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
|||||||||||| ||| |||||||||||| |||||||| | | | |||||||||||||||
Sbjct: 19 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaacat 78
Query: 99 caatatgaatgtgggcaatgctagaa 124
||||||||||||||| ||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| |||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | |||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 96 gaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgat 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggga 8
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||||| ||||||||||| | |||||||||
Sbjct: 70 tctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||| | ||||||||||||||||||| |||||||||||| | ||||||
Sbjct: 67 gaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | ||||||||||||||||| |||||||| |||| |||||||||
Sbjct: 93 tctagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| || || ||||||||||| ||| |||||
Sbjct: 156 cttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | |||| | | |||||||||||||||||||| |||||||| | |||||||||
Sbjct: 96 gaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||||||||||||
Sbjct: 36 agaatgacttacattatgaaacggaggga 8
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| ||||| | | |||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||||| | | | |||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 70 tctagacatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 129
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| |||||||||||
Sbjct: 130 atgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 140 aacggagg 147
||||||||
Sbjct: 122 aacggagg 129
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 132 cttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaat 73
Query: 61 gaatctaaacatat 74
|||||| ||||||
Sbjct: 72 aaatctagacatat 59
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
||||||||| | | |||||||||||||| |||||| |||||||||||||||
Sbjct: 10 cctccgtttcatattgtaagactttctagcattgttcacattcatatagat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtcttacaatatgaaacggaggga 8
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| ||| ||| ||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| || |||| ||| | | ||||||||||||||||||||||||||| | || |||||||||
Sbjct: 93 tatagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| | | |||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| |||||| ||||||||||||||||||||||| || |||||
Sbjct: 67 gaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 110/128 (85%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| || ||| |||||||||||||| |||||| |
Sbjct: 10 cctccgtttcataatgtaagactttctagcactgtttacattcatatagatgttaatgga 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| || |||||||||||||||| ||||| || |||| |||||||||||||||
Sbjct: 70 tctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatgctaga 129
Query: 124 aagtctta 131
||||||||
Sbjct: 130 aagtctta 137
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 79
|||||||||||| ||||| |||| |||| |||||| | |||||||||| ||| || | |
Sbjct: 137 taagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacatgtaag 78
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||| ||||| |||||||||| |||||||||| || |||||||||||||||||| |||
Sbjct: 77 tgtatagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattatga 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 111 bits (56), Expect = 3e-24
Identities = 126/149 (84%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||||||||| || | ||| |||||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||| || | |||||||||||||||| |||| ||||||| | ||||
Sbjct: 67 gaatctagacatat----gtatttagattcattaacatctttatgtatgtgggtagtgct 122
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| ||||||||| || ||||||||||||||
Sbjct: 123 aaaaagtcttatattgtgaaacggaggga 151
Score = 109 bits (55), Expect = 1e-23
Identities = 122/144 (84%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | ||||||||| || || | |||||| |||| |||| ||||||||
Sbjct: 149 cctccgtttcacaatataagactttttagcactacccacatacataaagatgttaatgaa 90
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||||| | |||||| ||||||||||||||||| | |||||||||||||| |||| |
Sbjct: 89 tctaaatacatatgt----ctagattcattaacatctaaatgaatgtgggcaacgctaca 34
Query: 124 aagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 66 tgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 125
Query: 138 gaaacggaggga 149
||||||||||||
Sbjct: 126 gaaacggaggga 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 90 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||| |||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 135 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 76
Query: 64 tcta 67
||||
Sbjct: 75 tcta 72
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 47 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 106
|||| ||| |||||||||||| | | |||| | |||||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 107 atgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||| ||| |||||| ||||||||| ||||||||||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggaggga 155
Score = 97.6 bits (49), Expect = 4e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||||| ||||| ||| |||||||||||| ||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatat 104
|||| |||||||| | | |||||||||||||||||||||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatat 53
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 33
Query: 99 caatatgaatgtgggcaatgctagaa 124
||||||||||||| | ||||||||||
Sbjct: 32 caatatgaatgtgagaaatgctagaa 7
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 40 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 99
||||||||||| ||| |||||||||||| | | |||| | ||||||||||||||||||||
Sbjct: 20 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatc 79
Query: 100 aatatgaatgtgggcaatgctagaa 124
|||||||||||||| ||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| |||| |||| || |||| ||| |||||
Sbjct: 154 cttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaat 95
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||||| |||||| | | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 94 gaatctggacatat--gcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggga 8
Score = 81.8 bits (41), Expect = 2e-15
Identities = 119/144 (82%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | || ||| | |||||||||||||||||||| || ||||| |||||||||
Sbjct: 70 tctagataggcatatgt--ccagattcattaacatcaatataaacgtgggaaatgctaga 127
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 128 atgacttatattgtgaaacggagg 151
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 107 bits (54), Expect = 4e-23
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 56 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggca 115
|||||||||||| | | |||| | ||||||||||||||||||||| |||||||||||| |
Sbjct: 66 ttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaa 125
Query: 116 atgctagaaagtcttacatcgtgaaacggaggga 149
||||||||| | ||||||| ||||||||||||||
Sbjct: 126 atgctagaatgacttacattgtgaaacggaggga 159
Score = 93.7 bits (47), Expect = 6e-19
Identities = 123/148 (83%), Gaps = 4/148 (2%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| ||||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 98
Query: 64 tctaaacatatatgtgtgtctagattcattaacatca----atatgaatgtgggcaatgc 119
|||| |||||||| | | ||||||||||||||||||| ||||||| || | |||||
Sbjct: 97 tctagacatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgc 38
Query: 120 tagaaagtcttacatcgtgaaacggagg 147
||||| | ||||||| ||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 107 bits (54), Expect = 4e-23
Identities = 125/149 (83%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| | |||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||| | ||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 67 gaatctagacatct------gtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||||||||||||
Sbjct: 121 agaatgacttacattatgaaacggaggga 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 119/144 (82%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| |||||||||||| ||| | ||||||
Sbjct: 147 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaa 88
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| ||| || ||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 87 tctagacagat------gtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| || |||| | ||||||||||||||| |||||||||| ||||| | ||||||
Sbjct: 67 gaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | ||||||| ||||||||||||||
Sbjct: 127 aaaatgacttacattgtgaaacggaggga 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 40 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 99
||||| ||||| ||| ||||||||||| |||||||| | ||||||||||||||| ||
Sbjct: 117 cacatccatattgatgctaatgaatctagacatatatatccgtctagattcattaatata 58
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
| |||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 57 agtatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
||||||| |||| ||| ||||||||||| | |||||| | | ||||||||||||||| |
Sbjct: 118 ccacattaatattgatggtaatgaatctagaaatatatatctatctagattcattaacgt 59
Query: 99 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | | ||||||||||||| ||||||||| |||||||| ||| ||
Sbjct: 67 gaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaattct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | |||| || ||||||||||||||
Sbjct: 127 aaaatgacttagattgtgaaacggaggga 155
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||||||||| ||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|| |||| | | |||| | ||||||||||||||| ||||||||||||| | | ||||||
Sbjct: 67 gactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | |||| || ||||||||||||||
Sbjct: 127 agaatgacttatattgtgaaacggaggga 155
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| || | |||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | |||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| || || ||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | |||| | | | |||||||||||||||||| |||||||| | |||||||||
Sbjct: 67 gaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| |||||||||||||
Sbjct: 127 agaatgacttacattatgaaacggaggga 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| ||||| | | |||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | ||| | | | |||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 93 tctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| |||||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 125/148 (84%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 2 ttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatg 61
||||||||||| | | | |||| | ||||| ||||| |||||||||||||||| ||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 62 aatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgcta 121
||||| ||||||| |||| |||||||||||| ||| ||| ||||||||||||| |||
Sbjct: 68 aatctggacatata--tgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 122 gaaagtcttacatcgtgaaacggaggga 149
||| | |||| || ||||||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggaggga 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 120/144 (83%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| |||||||| ||||||| |||||||
Sbjct: 151 cctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaa 92
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| || |||| ||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 91 tctagccacatatatgt--ccagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || |||||||||||
Sbjct: 33 atgacttatattatgaaacggagg 10
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| ||||||| ||||| |||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaat 66
Query: 61 gaatctaaacatata 75
||||||| |||||||
Sbjct: 67 gaatctagacatata 81
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 113 gcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||||||| |||||||||||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggaggga 119
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 138 gaaacggaggga 149
||||||||||||
Sbjct: 94 gaaacggaggga 105
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| |||||||||||||||||||||| |||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 64 tcta 67
||||
Sbjct: 43 tcta 40
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | || || ||||| |||||||||||||||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
||||||||||| | | | |||||||||||||||||| ||||| || |||| || ||||||
Sbjct: 93 tctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| |||||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| | || ||| || ||||||||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | ||| | | ||| ||||||||||| |||| ||||||||||||||||||||
Sbjct: 67 gaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | ||||||| |||||||||||||
Sbjct: 127 aaaatgacttacattatgaaacggaggga 155
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 61 gaatctaaacatata 75
||||||| |||||||
Sbjct: 67 gaatctagacatata 81
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| | ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||||| |||||||||||| | |||||||||||||| | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 99.6 bits (50), Expect = 1e-20
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 60 tgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgc 119
|||||||| ||||| || | |||||||||||||| ||||||||||||||||| | |||||
Sbjct: 66 tgaatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgc 125
Query: 120 tagaaagtcttacatcgtgaaacggaggga 149
||||| | ||||||| ||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 64 tctaaacatatat 76
|||| ||||||||
Sbjct: 70 tctagacatatat 82
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| | |||||| |||| ||| |||||||
Sbjct: 153 cctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||||||| |||||||||||||| ||||||| |
Sbjct: 93 tctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatgctaca 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | || || |||| |||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| | ||||||||||||||| ||||||||| |||||| ||||||
Sbjct: 67 gaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgct 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | |||| || ||||||||||||||
Sbjct: 127 agaatggcttatattgtgaaacggaggga 155
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 123/146 (84%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||| |||| ||| ||||| ||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | ||||||||||||||||||||||||||||| |||| |||||| ||
Sbjct: 93 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 93.7 bits (47), Expect = 6e-19
Identities = 122/146 (83%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||| | |||| ||| |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | | |||||| |||||||||||||| ||||| | |||||||||
Sbjct: 70 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 127
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggaggga 153
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 123/146 (84%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||| |||| ||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 67
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | ||||||||||||||||||||||||||||| |||| |||||| ||
Sbjct: 68 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 127
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggaggga 153
Score = 93.7 bits (47), Expect = 6e-19
Identities = 122/146 (83%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||| | |||| ||| |||||||| ||| ||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 92
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | | |||||| |||||||||||||| ||||| | |||||||||
Sbjct: 91 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 140 aacggaggga 149
||||||||||
Sbjct: 127 aacggaggga 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| ||||||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 75
Query: 64 tcta 67
||||
Sbjct: 74 tcta 71
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 76 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatc 135
|||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 66 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacatt 125
Query: 136 gtgaaacggaggga 149
|||||||||||||
Sbjct: 126 atgaaacggaggga 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | ||||| ||||| || ||||| |||||||||||||||| ||||||||
Sbjct: 137 cctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgttaatgaa 78
Query: 64 t 64
|
Sbjct: 77 t 77
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 119
Query: 140 aacggaggga 149
||| ||||||
Sbjct: 120 aacagaggga 129
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacat 72
|||||||||||||| |||||||||||||||||||||| |||||||||||| ||||
Sbjct: 113 tgtaagactttctagcattgtccacattcatatagatgttaatgaatctagacat 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||| ||| | | |||||||||||||| ||||||||||||||||||||||
Sbjct: 7 cttcctccttttcataatgtaagactttctagcattgtccacattcatatagat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||| |||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggagg 10
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/149 (83%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | |||| |||||||||||||| ||||||||||||||| || ||||||
Sbjct: 67 gaatctagatatat------gtctagattcattagcatcaatatgaatgtaggaaatgct 120
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | |||| || ||||||||||||||
Sbjct: 121 agaatgacttatattgtgaaacggaggga 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 120/144 (83%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| | |||||||||| ||| |||||||
Sbjct: 147 cctccgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaa 88
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| |||||||||||| |||||||||||||||||| |||||||||
Sbjct: 87 tctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 75 atgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 55 atgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 111
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaaca 71
|||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 111 taagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 104 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggaggga 8
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 97.6 bits (49), Expect = 4e-20
Identities = 96/112 (85%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 23 gactttctaacattgtccacattcatatagattttaatgaatctaaaca------tatat 76
||||||||||||||| |||||||||||| ||| |||||||||||| ||| |||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatcc 53
Query: 77 gtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 128
| | |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 95.6 bits (48), Expect = 2e-19
Identities = 97/112 (86%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 23 gactttctaacattgtccacattcatatagattttaatgaatctaaacatat----atg- 77
||||||||| ||||| |||||||||||| ||| |||||||||||| | |||| ||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctagatatatggatatta 60
Query: 78 -tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 128
|||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61 atgtgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 97.6 bits (49), Expect = 4e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| |||| ||||||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaat 66
Query: 61 gaatctaaacatatatgtgtg 81
||||||| |||||||| ||||
Sbjct: 67 gaatctagacatatatatgtg 87
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 40 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 99
||||||||||||||| |||||||||||| ||||||| ||| || ||||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatgt--cttgattcattaacatc 58
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
| ||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 57 tacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || || |||| |||||||||| ||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||| | ||||||| | || |||||||||||||||| ||||||||||| ||||||
Sbjct: 67 gaatcaagacatata--tatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | ||| ||| |||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggaggga 153
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 39 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 98
||||||| |||| ||| || ||||||||| |||||||| | | |||||||||||||||||
Sbjct: 45 ccacatttatattgatgtttatgaatctagacatatatttctatctagattcattaacat 104
Query: 99 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||| |||||||| ||||||| || | ||||| | ||||||||||||
Sbjct: 105 caatataaatgtgggaaatgctaaaatgacttactttgtgaaacggagg 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| ||||| | || || |||| ||||||| |||| ||| |||||
Sbjct: 156 cttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaat 97
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | | || | ||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 96 gaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgca 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
| || | ||||| | ||||||||||||||
Sbjct: 36 aaaatgacttactttgtgaaacggaggga 8
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 122/149 (81%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| ||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatgct 114
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||| ||||||
Sbjct: 115 agaatgacttacattgtgaaaccgaggga 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 144 gagg 147
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||| ||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 94 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||||| |||||||||| | ||||||| |||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggga 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| | |||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaat 66
Query: 61 gaatcta 67
|||||||
Sbjct: 67 gaatcta 73
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 76 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 56 tgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 111
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaaca 71
|||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 111 taagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 104 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggaggga 8
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 95.6 bits (48), Expect = 2e-19
Identities = 82/93 (88%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 30 taacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagatt 89
|||||||| ||||||||||||| || |||||||||||| |||||||| | |||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctagacatatatat----ctagatt 57
Query: 90 cattaacatcaatatgaatgtgggcaatgctag 122
||||||||| ||||||||||||||||||||||
Sbjct: 58 cattaacatatatatgaatgtgggcaatgctag 90
Score = 81.8 bits (41), Expect = 2e-15
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 33 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 92
||||| ||||||||||||| || |||||||||||| | |||||||| ||||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagatatatatgt----ctagattcat 31
Query: 93 taacatcaatatgaatgtgggcaatg 118
|||||| ||||||||||||||||||
Sbjct: 30 taacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/144 (84%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| ||| ||| |||| || ||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaa 93
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | |||||| | | ||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 92 tctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| | ||||||||||
Sbjct: 33 atgacttacattgcgaaacggagg 10
Score = 73.8 bits (37), Expect = 6e-13
Identities = 122/149 (81%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| || |||||| | ||||| |||| ||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | | || | | ||||||||||||||||| ||||| ||| |||| |||| |
Sbjct: 67 gaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatgtt 125
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 126 agaatgacttacattgtgaaacggaggga 154
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||| |||| |||||||||| | ||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 142 cggagg 147
||||||
Sbjct: 130 cggagg 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 105
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 124 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaat 65
Query: 61 gaatctaaacat 72
||||||| ||||
Sbjct: 64 gaatctagacat 53
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 103 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggga 8
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 142 cggaggga 149
||||||||
Sbjct: 126 cggaggga 133
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | |||||||||| |||||||||||| ||| ||||||||
Sbjct: 131 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 72
Query: 64 tcta 67
||||
Sbjct: 71 tcta 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 146 gg 147
||
Sbjct: 11 gg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||||||||||||||||||| | |||||||||| | |||||| ||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 146 ggga 149
||||
Sbjct: 135 ggga 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 61 gaatc 65
|||||
Sbjct: 67 gaatc 71
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 54 tgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtga 113
Query: 140 aacgga 145
||||||
Sbjct: 114 aacgga 119
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||| ||||||| ||| |||||||||||||| ||||| |||||||||||| ||| ||||
Sbjct: 124 cttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaat 65
Query: 61 gaatctaaacatatatgtg 79
|||| || ||||| |||||
Sbjct: 64 gaatttagacataaatgtg 46
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 114 caatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||||||| ||||| |||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggagg 10
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 70 catatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtct 129
||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 87 catatatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtct 28
Query: 130 ta 131
||
Sbjct: 27 ta 26
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 7 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaac 66
Query: 61 gaatcta 67
|||||||
Sbjct: 67 gaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtctta 131
|||||||||||||||||||||||||||||||
Sbjct: 83 atatgaatgtgggcaatgctagaaagtctta 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatata 51
|||||||||||| ||||| |||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||| |||||||||| ||||| |||| ||||
Sbjct: 70 tctagacatatatatctatctagattcattagcatcaatatggatgtgaacaatagtaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| |||||||||||||
Sbjct: 130 atgacttacattatgaaacggaggga 155
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/146 (82%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| ||||| ||||| ||||| ||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | | |||| | |||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 93 tctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| |||||||||||||
Sbjct: 33 atgacttacattatgaaacggaggga 8
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||| ||||||||||||| |||||||||| | ||||||| ||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 144 gaggga 149
||||||
Sbjct: 13 gaggga 8
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 121
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagatt 55
||||||||| ||| |||||| | ||||| |||| |||||||||||||||||
Sbjct: 119 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatt 68
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||| ||||| ||||||| ||||||||||||||||| || ||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 144 gaggga 149
||||||
Sbjct: 128 gaggga 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||||||||||| |||| |||||| ||||||||| ||||||||
Sbjct: 131 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 72
Query: 64 tctaaacatat 74
|||||||||||
Sbjct: 71 tctaaacatat 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 106 aatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||| |||||| | ||||||||| || ||||||||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggagg 10
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||| ||||| ||||||| ||||||||||||||||| || ||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 144 gaggga 149
||||||
Sbjct: 13 gaggga 8
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||||||||||| |||| |||||| ||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 69
Query: 64 tctaaacatat 74
|||||||||||
Sbjct: 70 tctaaacatat 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 106 aatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||| |||||| | ||||||||| || ||||||||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggagg 131
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 144 gaggga 149
||||||
Sbjct: 122 gaggga 127
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||| ||||||| || | |||| || ||||||| ||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagagg 6
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
|||| |||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 125 cctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 66
Query: 64 tcta 67
||||
Sbjct: 65 tcta 62
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 27 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 86
|||||||||| |||||||||||||| | |||||||||||| | |||||| |||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 41
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||||| | |||||||||||| ||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 27 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 86
||||| |||| ||||||||||||||| | |||||||||||| |||| ||| | | |||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||||| | ||||||||||||| |||| |||||
Sbjct: 63 attcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 3e-18
Identities = 122/149 (81%), Gaps = 10/149 (6%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||||||| |||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| |||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 67 gaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatgct 116
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||| ||||
Sbjct: 117 agaatgacttacattgtgaaacgggggga 145
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||| ||||| |||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||||||||||||||||| |||||||||| | |||| || ||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 144 gaggga 149
||||||
Sbjct: 132 gaggga 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| |||||||||||| ||| ||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Query: 64 tctaaacatat 74
|||| ||||||
Sbjct: 75 tctatacatat 65
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 81 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
|||||||||||||||||||||||||||| ||| |||||||||| | ||||||| |||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 141 acggaggga 149
|||||||||
Sbjct: 134 acggaggga 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 83 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 142
||||||| |||||||||||||| |||||| | |||||||||| | ||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 143 ggagg 147
|||||
Sbjct: 14 ggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| ||||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 81
Query: 64 tcta 67
||||
Sbjct: 80 tcta 77
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||| |||||||||||||||||||||||| |||||||||| | ||||||| |||
Sbjct: 57 tgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatga 116
Query: 140 aacggagg 147
||||||||
Sbjct: 117 aacggagg 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 127 cttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaat 68
Query: 61 gaatctaaacatatat 76
| ||||| ||||||||
Sbjct: 67 ggatctagacatatat 52
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||||| || |||||||||| | ||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 142 cggaggga 149
||||||||
Sbjct: 113 cggaggga 120
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 142 cgga 145
||||
Sbjct: 15 cgga 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||| |||||||| ||| ||| |||||||||| | ||||||| ||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 144 gaggga 149
||||||
Sbjct: 138 gaggga 143
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
||||||||| |||||||||||||||||| |||||||||| | ||||||| ||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 146 ggga 149
||||
Sbjct: 11 ggga 8
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 146 ggga 149
||||
Sbjct: 132 ggga 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 69
Query: 64 tc 65
||
Sbjct: 70 tc 71
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||| |||||||||||||||||||||||| |||||||||| | ||||||| ||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 144 gagg 147
||||
Sbjct: 138 gagg 141
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 142 cgga 145
||||
Sbjct: 15 cgga 12
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||| |||||||| ||| ||| ||||||| || | ||||||| ||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 144 gaggga 149
||||||
Sbjct: 138 gaggga 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||| ||||||| ||| |||||| | ||||| |||| ||||||||||| ||| |||||
Sbjct: 7 cttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaat 66
Query: 61 gaatcta 67
|||||||
Sbjct: 67 gaatcta 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||| || |||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 140 aacggagg 147
||||||||
Sbjct: 132 aacggagg 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||||| |||||||||||||||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 147 gga 149
|||
Sbjct: 10 gga 8
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||| |
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 138 gaaacggaggga 149
||||||||||||
Sbjct: 19 gaaacggaggga 8
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||||||||||| |||| ||| |||||||||||| |||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 142 cggaggga 149
| ||||||
Sbjct: 15 ctgaggga 8
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggagg 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||||||||||||| ||||| ||||||| ||| ||| ||||||||||||
Sbjct: 24 tgtaagactttctagcattgcccacatttttatggatgttaatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||| ||| | | |||||||||||||| ||||| ||||||||||||
Sbjct: 128 cttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||||| |||| ||||| | |||| || ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 142 cggaggga 149
||||||||
Sbjct: 125 cggaggga 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 93 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | |||||||||| |||||||||||| ||| ||||||||
Sbjct: 130 cctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaa 71
Query: 64 tcta 67
||||
Sbjct: 70 tcta 67
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| | |||| | ||||| |||| |||||||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||| || |||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 63 tgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtga 122
Query: 140 aacggagg 147
||||||||
Sbjct: 123 aacggagg 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| || |||||
Sbjct: 133 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaat 74
Query: 61 gaatctaaacatatat 76
||||||| ||||||||
Sbjct: 73 gaatctagacatatat 58
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||| |||||||||| | ||||||| |||||| |||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggaggga 8
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 142 cggaggga 149
|||||||
Sbjct: 15 tggaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 18 tgtaagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||||||||||||| |||||||||||||||||||||| ||||| ||||||
Sbjct: 24 tgtaagactttctagcattgtccacattcatatagatgttaataaatcta 73
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 112 ggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||||||| |||||||||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggaggga 121
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||| ||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 90 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||| |||||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||| |||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 140 aacggag 146
|||||||
Sbjct: 125 aacggag 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 93 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||| |||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 5 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaat 64
|||||||| | | |||||||||||||| ||||||||| ||| |||||||| |||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 65 ctaaacata 73
||| |||||
Sbjct: 71 ctagacata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||| | | |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagat 60
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 71 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 130
|||||| | ||||||||||||||| |||| |||||||||||||||||| |||||||||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctt 116
Query: 131 acatcgtgaaacggaggga 149
| | |||||||||||||
Sbjct: 117 ataatatgaaacggaggga 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatat 76
|||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 117 taagactttctatcattgcccacattcatatagatgctaatgaatctagacatatat 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtctta 131
||||||||||||||||| ||||| |||||||
Sbjct: 56 atatgaatgtgggcaatactagatagtctta 26
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 85 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 144
|||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 145 agg 147
|||
Sbjct: 12 agg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||||||| |||||||||| | ||||| | ||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggaggga 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaat 66
Query: 61 gaatct 66
||||||
Sbjct: 67 gaatct 72
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 43 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 102
||||||||||| ||| |||||||| | | |||| | |||||||||||| |||| || ||
Sbjct: 49 attcatatagaggttagtgaatctatatagatatatatgtctagattcactaacctccat 108
Query: 103 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||| |||||||||| | ||||||| |||||||||||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattatgaaacggaggga 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| |||||||||||| || ||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | | |||||||| |||| || |||||||| | || |||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| |||||||||||||
Sbjct: 33 atgacttacattatgaaacggaggga 8
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 116/142 (81%), Gaps = 15/142 (10%)
Strand = Plus / Plus
Query: 5 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaat 64
|||||||| ||| |||||| | |||||||||| |||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 65 ctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 71 ctaaacata--------tctagattcattaacatcaatatgaa-------aatgctagaa 115
Query: 125 agtcttacatcgtgaaacggag 146
| ||||||| |||||||||||
Sbjct: 116 tgacttacattgtgaaacggag 137
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 144 gag 146
|||
Sbjct: 13 gag 11
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||| |||| |||||||||||| | |||||||||| | ||||||| ||||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtga 125
Query: 140 aacggaggga 149
||||||||||
Sbjct: 126 aacggaggga 135
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||||||||||||||||||||||| |||||||||| | |||| || ||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 144 gaggga 149
||||||
Sbjct: 132 gaggga 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||| | ||||| |||| ||||||||||||| ||| ||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Query: 64 tctaaacatat 74
|||| ||||||
Sbjct: 75 tctatacatat 65
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| |
Sbjct: 137 cttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagatgttatt 79
Query: 61 gaatctaaacatat 74
||||||||||||||
Sbjct: 78 gaatctaaacatat 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||| ||||||| | |||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 144 gagg 147
||||
Sbjct: 131 gagg 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 107 atgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||| ||||||||||||| |||| || ||||||||||||
Sbjct: 50 atgtggccaatgctagaaaggcttagattgtgaaacggagg 10
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||||||| ||| | |||| ||||||| ||||| |||||| | |||||||
Sbjct: 7 cttcctccgtttcacaatctaagcctttctagcattggccacatacgtatagat 60
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacat 72
|||||||||||| ||||| ||||||||||||| | |||||||||||| ||||
Sbjct: 26 taagactttctagcattgcccacattcatatatacgttaatgaatctagacat 78
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||| || | ||||||||||||||||||| |||||||| ||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 144 gaggga 149
||||||
Sbjct: 13 gaggga 8
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| ||||||| |||||| ||||| |||||| | |||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgttaatgaa 69
Query: 64 tctaaacatata 75
||||||||||||
Sbjct: 70 tctaaacatata 81
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 103 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||| | ||||||||||||||||| || ||| ||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggagg 133
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 140 aacggaggga 149
||||||||||
Sbjct: 116 aacggaggga 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacat 72
|||||||||||| ||||| ||||||||||||| | |||||||||||| ||||
Sbjct: 107 taagactttctagcattgcccacattcatatatacgttaatgaatctagacat 55
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggaggga 117
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||| |||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||||||| ||| |||||||||||||| | ||| ||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
||||||||| ||| ||||||| |||||| ||||| ||||||||||||||||
Sbjct: 115 cctccgtttcacaatgtaagagtttctagcattgcccacattcatatagat 65
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 83.8 bits (42), Expect = 6e-16
Identities = 122/149 (81%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt---- 62
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||| |||||| | | | |||| | |||||||||||||||||||||||| || |||
Sbjct: 63 --atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggct 120
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 121 agaatgacttacattgtgaaacggaggga 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 142 cggagg 147
||||||
Sbjct: 105 cggagg 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 113 cttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaat 54
Query: 61 gaatcta 67
|||||||
Sbjct: 53 gaatcta 47
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 116 atgctagaaagtcttacatcgtgaaacggaggga 149
||||||||| | ||||||| ||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| |||||||| | | ||||||||||||| |||| ||||| ||||| ||| |||||
Sbjct: 70 tctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaatactaga 129
Query: 124 aagtcttacatcgtgaaacggaggga 149
| | ||||||| |||||||||||||
Sbjct: 130 atgacttacattatgaaacggaggga 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 40 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 99
||||| ||||| ||| ||||||||||| | | |||| | |||||||||||||| ||||
Sbjct: 117 cacatccatatcgatgctaatgaatctagataaatatatatgtctagattcattggcatc 58
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||| |||||||||| | ||||||| |||||||||||||
Sbjct: 57 gatatgaatgtggaaaatgctagaatgacttacattatgaaacggaggga 8
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||
Sbjct: 60 tgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttga 119
Query: 140 aacggaggga 149
||||||||||
Sbjct: 120 aacggaggga 129
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatat 76
|||||||||||| |||| ||||||||||||| || |||||||||||| ||||||||
Sbjct: 111 taagactttctagcattacccacattcatatatatgttaatgaatctagacatatat 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtctta 131
||||||||||||| ||| |||||||||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtctta 26
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||||||||||||| |||| ||||||| || | |||| || ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtga 136
Query: 140 aacggaggga 149
||||||||||
Sbjct: 137 aacggaggga 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 43 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 102
|||||||| ||| |||||||||||| ||||||| | | |||||||||||||||||||||
Sbjct: 105 attcatattgatgttaatgaatctagacatata--tctatctagattcattaacatcaat 48
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||||||||||||| || | |||||||||| | ||||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatga 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 102 tatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||| |||||||||| | ||||||| || |||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggagg 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 43 attcatatagattttaatgaatctaaacatatatgtgtgtctagatt 89
|||||||| ||| |||||||||||| |||||||| | | ||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatctagatt 95
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||||||||||||||||||||| ||||||| || | ||||||| ||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 146 gg 147
||
Sbjct: 128 gg 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || || |||| |||||||||||| ||| |||||
Sbjct: 132 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaat 73
Query: 61 gaatc 65
|||||
Sbjct: 72 gaatc 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||||||||||| ||||| | || | ||||||| ||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||||||||||||||| | ||| ||| || | ||||||| ||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 140 aacggaggga 149
||||||||||
Sbjct: 135 aacggaggga 144
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||| | |||||||||| | |||| || ||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 142 cggagg 147
||||||
Sbjct: 117 cggagg 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| |||| ||||||||||| ||| |||||
Sbjct: 125 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaat 66
Query: 61 gaatcta 67
|||||||
Sbjct: 65 gaatcta 59
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 119/144 (82%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| | |||||||||| || ||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaa 92
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
|||| | |||||| ||| ||| |||||||||||| | |||||||||||| ||||| |||
Sbjct: 91 tctagatatatatatgt--ctaaattcattaacatgagtatgaatgtgggaaatgccaga 34
Query: 124 aagtcttacatcgtgaaacggagg 147
| | |||| || ||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | |||| |||| ||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || |||||||| | | |||||||||||||||| | |||||||||| ||||||
Sbjct: 67 gaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 125 agaatgacttacattgtgaaacggaggga 153
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 83 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 142
|||||||||||| |||||||||||||||||| ||||||| || | ||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 143 ggagg 147
|||||
Sbjct: 14 ggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 90 cattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaaacggaggg 148
||||| |||||||||||||||||| ||||||| | | | ||||||| |||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 149 a 149
|
Sbjct: 140 a 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || || |||| |||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 66
Query: 61 gaatcta 67
|||||||
Sbjct: 67 gaatcta 73
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 71 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 130
|||||| ||||| |||||||||||||||| |||| |||||||||||| |||||||||||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtctt 112
Query: 131 acatcgtgaaacggagg 147
| || || |||||||||
Sbjct: 113 atattgtaaaacggagg 129
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | |||||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 129 cctccgttttacaatataagactttctaacattgcccacatatatatagatgttaatgaa 70
Query: 64 tctaaacatatat 76
|||||||| ||||
Sbjct: 69 tctaaacacatat 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 107 atgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||||||||||||||||||||||| || |||||||||| | ||||||| |||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 147 g 147
|
Sbjct: 109 g 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 103 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| | |||||||||| ||| |||||
Sbjct: 112 cttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaat 53
Query: 61 gaat 64
||||
Sbjct: 52 gaat 49
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 147 g 147
|
Sbjct: 109 g 109
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
||||||| |||| ||| |||||||||||||| | ||| |||||||||||||||| |||||
Sbjct: 112 cttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatattaat 53
Query: 61 gaat 64
||||
Sbjct: 52 gaat 49
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 83 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 142
|||||||||||| |||||||||||||||||| ||||||| || | ||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 143 ggagg 147
|||||
Sbjct: 134 ggagg 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 90 cattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaaacggaggg 148
||||| |||||||||||||||||| ||||||| | | | ||||||| |||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 149 a 149
|
Sbjct: 8 a 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | || || |||| |||||||||||| ||| ||||
Sbjct: 141 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 82
Query: 61 gaatcta 67
|||||||
Sbjct: 81 gaatcta 75
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 81.8 bits (41), Expect = 2e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 71 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 130
|||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 55 atatatgt-tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtctt 113
Query: 131 a 131
|
Sbjct: 114 a 114
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 114 taagactttctagcattgtccacattcatatatatgttaatgaatcta 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtctta 131
||||||||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagg 127
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||| ||||||||| ||| |||| ||||||| || | ||||||| |||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtgg 18
Query: 140 aacggaggga 149
||||||||||
Sbjct: 17 aacggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||||| ||||| |||| ||||||||||||
Sbjct: 130 cttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| |||| |||||||| |||| ||||||||||||||||| || |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 142 cggaggga 149
||||||||
Sbjct: 130 cggaggga 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagactta 26
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||| ||||||| ||||| || |||||||||||| ||||||||||||
Sbjct: 26 taagtctttctagcattgctcatattcatatagatgttaatgaatcta 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||||||||||| |||| ||| |||||||||||| |||||||||||
Sbjct: 119 taagactttctagcattacccatattcatatagatgctaatgaatcta 72
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 144 gagg 147
||||
Sbjct: 13 gagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 122/150 (81%), Gaps = 11/150 (7%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 61 gaatctaaacatatatgtgtgtc-tagattcattaacatcaatatgaatgtgggcaatgc 119
||||||| |||| | ||| |||||||||||||||||||||||| | |||||
Sbjct: 67 gaatcta----------tgtgacatagtttcattaacatcaatatgaatgtgagaaatgc 116
Query: 120 tagaaagtcttacatcgtgaaacggaggga 149
||||| | ||||||| ||||||| ||||||
Sbjct: 117 tagaatgacttacattgtgaaaccgaggga 146
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||| ||||||||||| |||||||||||| | ||||||| |||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatga 119
Query: 140 aacggagg 147
|| |||||
Sbjct: 120 aatggagg 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||| ||| | | |||||| | ||||| ||||| ||||||||||||||| |||||
Sbjct: 130 cttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaat 71
Query: 61 gaatctaaacatatat 76
||||||| ||||||||
Sbjct: 70 gaatctagacatatat 55
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| ||| |||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 142 cggaggga 149
||||||||
Sbjct: 122 cggaggga 129
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||||| |||| || || | ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||| | | |||||||||| | |||| || ||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 142 cggagg 147
||||||
Sbjct: 136 cggagg 141
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||||||| |||| |||| | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaa 119
Query: 142 cggaggga 149
||||||||
Sbjct: 120 cggaggga 127
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 28 tctaacattgtccacattcatatagattttaatgaatctaaacatatatg 77
||||||||| ||||||||||||| ||| |||||||||||| | |||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatatg 52
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
|||||||||||| ||||||||| || ||||||||| |||||||||||||||||| | |
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatat 20
Query: 138 gaaacggaggga 149
||||||||||||
Sbjct: 19 gaaacggaggga 8
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||||||| | | | |||||||||||| ||||||||||||||||||||||
Sbjct: 135 cttcctccgtttcatattataagactttctagcattgtccacattcatatagat 82
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatcta 67
|||||||||||| ||||||||||||||| |||||| ||||| ||||||
Sbjct: 26 taagactttctagcattgtccacattcacatagatgttaataaatcta 73
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 94 aacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||| |||||||||||| ||||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtctta 116
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||||| |||| || || | ||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 142 cggaggga 149
||||||||
Sbjct: 136 cggaggga 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||| | | |||||||||| | |||| || ||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 142 cggagg 147
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| ||| |||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 130 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 81
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||||||||||||||||||||| ||||||||| | |||| || ||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 144 gagg 147
||||
Sbjct: 124 gagg 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 94 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| ||| |||||||||||| ||| |||||
Sbjct: 130 cttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaat 71
Query: 61 gaatctaaacat 72
||||||||||||
Sbjct: 70 gaatctaaacat 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
||||||||| ||| |||||| | ||||| |||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||||||||||||||||||||||||| | ||| |||||| | ||||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 40 cacattcatatagattttaatgaatctaaacatatatg 77
||||||||||| ||| |||||||||||| ||| |||||
Sbjct: 46 cacattcatattgatgttaatgaatctagacaaatatg 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||| | |||||||||| | ||||||| ||||| |||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggaggga 127
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 88 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||||||| |||||||||| | ||| ||| ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| || ||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 61 gaa 63
|||
Sbjct: 67 gaa 69
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||||||| | | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||| || ||| ||||| | |||| || ||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggagg 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| || | |||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaa 69
Query: 64 tcta 67
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 89 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||| ||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 92 ttaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||| ||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaat 69
Query: 61 ga 62
||
Sbjct: 68 ga 67
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||| ||||||||| |||||||||||| ||||||||||| ||||||| |||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatga 124
Query: 140 aacggaggga 149
||||||||||
Sbjct: 125 aacggaggga 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 27 ttctaacattgtccacattcatatagattttaatgaatctaaacata 73
||||| |||||||||||||||||||||| ||||| |||||| |||||
Sbjct: 109 ttctagcattgtccacattcatatagatgttaataaatctagacata 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 104 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 75.8 bits (38), Expect = 2e-13
Identities = 121/149 (81%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| |
Sbjct: 150 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt---- 95
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||| |||||| | | | |||| | ||||||||||| |||||||||||| ||||||
Sbjct: 94 --atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgct 37
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | ||||||| ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggga 8
Score = 65.9 bits (33), Expect = 1e-10
Identities = 116/144 (80%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgag 69
Query: 64 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 123
| || | | ||| | ||||||||| |||||||||||||| ||| |||||||||
Sbjct: 70 tttagatagatacatatgtctagat------acatcaatatgaatatggaaaatgctaga 123
Query: 124 aagtcttacatcgtgaaacggagg 147
| | ||||||| ||||||||||||
Sbjct: 124 atgacttacattgtgaaacggagg 147
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 145
|||||||||||||| |||||||||||| || ||||||||||||||| | | |||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 146 gg 147
||
Sbjct: 133 gg 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 20 taagactttctaacattgtccacattcatatagattttaatgaatc 65
|||||||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 118 taagactttctagcactgtccacattcatatagatgttaatgaatc 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||| |||||||| ||| || ||||||||||||||| | | |||||||||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatatagat 54
|||||||||||| || |||||| ||||||||||||
Sbjct: 26 taagactttctagcactgtccatattcatatagat 60
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||| ||||||||| ||| |||||||||| | ||||||| ||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 142 cggagg 147
||||||
Sbjct: 124 cggagg 129
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||| |||||||| || |||||
Sbjct: 132 cttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaat 73
Query: 61 gaatcta 67
|||||||
Sbjct: 72 gaatcta 66
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaa 140
|||||||||||||||||||||||||||||||| |||| |||| | ||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 141 acggaggga 149
|||||||||
Sbjct: 16 acggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 28 tctaacattgtccacattcatatagattttaatgaatcta 67
||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatcta 74
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 89 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 148
|||||| |||||||||||||||| | |||||||||| | ||||||||||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 149 a 149
|
Sbjct: 8 a 8
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 85 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 144
|||||||||| |||||||||||||||| | |||||||||| | |||| || |||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 145 agg 147
|||
Sbjct: 128 agg 130
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||||| |||||||||||||| || |||||||||| | ||||||| |||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 147 g 147
|
Sbjct: 121 g 121
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||| ||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| | |||||||||| ||| |||||
Sbjct: 124 cttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaat 65
Query: 61 gaat 64
||||
Sbjct: 64 gaat 61
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 85 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 144
||||||||||||||| | || ||||||| |||| |||||||| ||||||| |||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 145 aggga 149
|||||
Sbjct: 111 aggga 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| ||||||| |||||||||||| || ||||| ||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 64 tct 66
|||
Sbjct: 53 tct 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 108 tgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||| ||||||||||||| ||||||| ||||||||||||||
Sbjct: 49 tgtggacaatgctagaaagccttacattgtgaaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccaca 43
||||||||| ||| |||||| ||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaaggctttctagcattgtccaca 49
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 81 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
|||||||||||||| ||||||||||||| |||| ||| |||||| | ||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 141 acggaggga 149
|||||||||
Sbjct: 125 acggaggga 133
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 81 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
||||||||||||||||||| ||||| |||||||||||||||||| | |||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 141 acggaggga 149
|| ||||||
Sbjct: 121 acagaggga 129
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 27 ttctaacattgtccacattcatatagattttaatgaatcta 67
||||| ||||| |||||| ||||||||| ||||||||||||
Sbjct: 104 ttctagcattgcccacatgcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||||||||||||||||||||| ||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 147 g 147
|
Sbjct: 10 g 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaat 66
Query: 61 gaat 64
||||
Sbjct: 67 gaat 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||||||||||||| ||| |||||||||| | ||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 89 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 148
|||||||||||||||||||||||| ||||||| || | ||||||| |||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 149 a 149
|
Sbjct: 8 a 8
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 93 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||||| ||||||| || |||||| ||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggaggga 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatga 62
||||||||| ||| |||||| | || || |||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||||||| ||||||||||||| | |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 147 g 147
|
Sbjct: 10 g 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||| ||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggaggga 127
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| |||||||| ||||||||| ||||| | ||||||| || | |||||| ||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 142 cggaggga 149
||||||||
Sbjct: 136 cggaggga 143
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||| |||||||||||||| ||| || | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 142 cggaggga 149
||||||||
Sbjct: 135 cggaggga 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||| | |||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 58 tgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtga 117
Query: 140 aacggagg 147
||||||||
Sbjct: 118 aacggagg 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | ||||| |||| |||||||||||| | ||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaat 69
Query: 61 gaatctaaacatatatg 77
||||||| |||||||||
Sbjct: 68 gaatctagacatatatg 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||| | |||||||||| ||||||| ||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| ||| ||||| |||||||| |||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 88 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| |||||||| ||| |||||| | ||||||| ||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 88 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||||||| ||| ||||| | |||| || ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 148 ga 149
||
Sbjct: 9 ga 8
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
|||||||||| |||||||||||||||||| |||| ||||||| || | ||| ||| ||||
Sbjct: 64 tgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtga 123
Query: 140 aacggagg 147
||||||||
Sbjct: 124 aacggagg 131
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 94 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||| |||||||| || |||||||||||||||||||||| || |||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggaggga 105
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
||||||||| ||| |||||||||||||| ||||| || ||||||||||||
Sbjct: 103 cctccgttttacaatgtaagactttctagcattgctcatattcatatagat 53
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 114 caatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||| |||||| |||||||||||
Sbjct: 43 caatgctagaaagttttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||||||||||||||||||||| |||| ||||| | |||| || |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatga 126
Query: 140 aacggagg 147
||||||||
Sbjct: 127 aacggagg 134
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||| | |||||||||| ||||||||||||| ||| |||||
Sbjct: 137 cttcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaat 78
Query: 61 gaatctaaacatata 75
||||||| |||||||
Sbjct: 77 gaatctagacatata 63
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctag 122
|||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatg 118
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 tgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 130
||||||||||||||||| || || ||||||||||||||||| |||||||||
Sbjct: 91 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 130
||||||||||||||||| || || ||||||||||||||||| |||| ||||
Sbjct: 51 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 21 aagactttctaacattgtccacattcatatagattttaatgaatctaaacat 72
||||||||| | ||||| ||||||||| ||||| |||||||||||| ||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctagacat 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 33 cattgtccacattcatatagattttaatgaatctaaacatat 74
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctagacatat 54
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||| |||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 117 tgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||| ||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggaggga 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||| | | |||||||||||||| ||||| ||| ||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatatagat 60
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 85 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 144
||||||||||| |||||| |||||||||| |||||||||| | |||| || |||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 145 agg 147
|||
Sbjct: 128 agg 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 89 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 148
||||||| |||||| |||||||| | |||||||||| | |||| || |||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 149 a 149
|
Sbjct: 8 a 8
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| |||| ||||||||| || ||| |||||
Sbjct: 133 cttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaat 74
Query: 61 gaatct 66
||||||
Sbjct: 73 gaatct 68
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| |||||||||||||||||||||| ||| |||| ||||| | ||||||| ||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 142 cggagg 147
||||||
Sbjct: 15 cggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||| | |||||||||| |||| |||||||| ||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaat 66
Query: 61 gaat 64
||||
Sbjct: 67 gaat 70
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||| ||||||||| | ||||||||| ||||| |||||||||||| || ||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 144 gaggga 149
||||||
Sbjct: 116 gaggga 121
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| | ||||||||||||| |||| ||||||||| ||||| ||||| ||
Sbjct: 119 cctccgtttcacaatataagactttctaatattgcacacattcatttagatgttaataaa 60
Query: 64 tctaaa 69
||||||
Sbjct: 59 tctaaa 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 103 atgaatgtgggcaatgctagaaagtcttacat 134
||||||||||||||||||| ||||||||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtcttacat 23
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt 56
|||| ||||||| | | ||||||||||| || ||||| |||||||||| |||||||
Sbjct: 7 cttcatccgttttataatgtaagactttttagcattgcccacattcatttagattt 62
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 144 gaggga 149
||||||
Sbjct: 118 gaggga 123
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||| || ||||||||||||| ||||| || || ||||||||| || ||||||||| ||
Sbjct: 63 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 122
Query: 138 gaaacggagg 147
||||||||||
Sbjct: 123 gaaacggagg 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||| || || ||||| || || ||||||||| |||||
Sbjct: 135 cttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaat 76
Query: 61 gaatctaaaca 71
|||| ||||||
Sbjct: 75 gaatttaaaca 65
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||||||||||||||| | ||||| |||||||||| ||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 144 gaggga 149
||||||
Sbjct: 13 gaggga 8
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||| ||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 43 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 102
|||||||| ||| |||||||||||||||||||| | | |||| |||||||| |||||||
Sbjct: 114 attcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatcaat 55
Query: 103 atgaat 108
||||||
Sbjct: 54 atgaat 49
Score = 65.9 bits (33), Expect = 1e-10
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
||||||||||| ||||| |||| | ||||| ||| |||| |||||||| ||| ||||
Sbjct: 7 cttcctccgttccacagtataagtcattctagtattttccatattcatattgatgctaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
|||| || | | |||| | ||| ||||||||||| ||||||||||||| || | |||| |
Sbjct: 67 gaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatgtt 126
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
|||| | |||| || ||| ||||||||||
Sbjct: 127 agaatgacttatattgtggaacggaggga 155
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
|||||| |||||||||||||| | ||||| |||||||||| | ||||||| ||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 144 gaggga 149
||||||
Sbjct: 131 gaggga 136
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 78 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 137
||||| || ||||||||||||| ||||| || || ||||||||| || ||||||||| ||
Sbjct: 79 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 20
Query: 138 gaaacggagg 147
||||||||||
Sbjct: 19 gaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| |||||||| || || ||||| || || ||||||||| |||||
Sbjct: 7 cttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaat 66
Query: 61 gaatctaaaca 71
|||| ||||||
Sbjct: 67 gaatttaaaca 77
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| ||||||||||||||||| ||| |||||| | |||| || ||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 142 cggagg 147
||||||
Sbjct: 15 cggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 120/149 (80%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | ||||| ||| |||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaat 66
Query: 61 gaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgct 120
||||||| | | |||| |||||||| |||| |||||||||||||||||| |||| |
Sbjct: 67 gaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatggt 123
Query: 121 agaaagtcttacatcgtgaaacggaggga 149
||| | ||||||| |||||||||||||
Sbjct: 124 ggaatgacttacattatgaaacggaggga 152
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 144 gaggga 149
||||||
Sbjct: 13 gaggga 8
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 94 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||| ||| |||||||||| | ||||||| ||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| ||| |||||| ||||| |||| ||||||||||||| ||| || |||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaa 68
Query: 64 tctaaacat 72
|||||||||
Sbjct: 69 tctaaacat 77
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 50
|||||||||||| ||| |||||| | ||||| |||| |||| ||||||||
Sbjct: 129 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 88 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||| ||| |||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 148 ga 149
||
Sbjct: 117 ga 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 100 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||||||||| |||| ||||| | ||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 142 cggagg 147
||||||
Sbjct: 120 cggagg 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||| |||||||||| | |||| || ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | |||||| | ||||| |||| | ||||||||||| ||| |||||
Sbjct: 128 cttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaat 69
Query: 61 gaatcta 67
|||||||
Sbjct: 68 gaatcta 62
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct: 53 tgtctagattcattagcatcaatatgaatgtgagaaatgctagaa 97
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 134
|||||||| |||||||||||||||| | |||||||||| | |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 2
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 128
||||||||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 49 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaa 125
||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 89 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 23 gactttctaacattgtccacattcatatagattttaatgaatctaaacat 72
||||||| | ||||| ||||||||| ||||| |||||||||||| ||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctagacat 50
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 33 cattgtccacattcatatagattttaatgaatctaaacatat 74
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctagacatat 86
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcatata 51
|||||||||||| ||||| |||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 109 gtgggcaatgctagaaagtctta 131
|||||||||||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtctta 83
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| | |||||||||| | ||||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||| |||||||||| | |||| || ||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 98 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 80 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 139
||||||||||||||| ||||||||| ||| || | ||||||| || | ||||||| ||||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtga 18
Query: 140 aacggagg 147
||||||||
Sbjct: 17 aacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||| ||||||| || | |||| || ||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggaggga 136
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| ||| ||||| |||||||| ||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| ||||||||| ||||||| ||||||| || | |||| || ||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 142 cggaggga 149
||||||||
Sbjct: 142 cggaggga 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| |||||||| ||||||| | |||||| | ||||||| || | ||||||| ||||||
Sbjct: 75 tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaa 16
Query: 142 cggagg 147
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||| |||||||||| |||||||||||| ||| |||||| | ||||||| |||||
Sbjct: 74 tctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatgaaa 133
Query: 142 cggaggga 149
| ||||||
Sbjct: 134 cagaggga 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||| |||||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||| |||||||| ||||||||||||||| | |||||||||| | |||||| ||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 142 cggaggga 149
||||||||
Sbjct: 136 cggaggga 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||| ||||||||| ||| || ||| |||||| | ||||||| ||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 142 cggaggga 149
||||||||
Sbjct: 15 cggaggga 8
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 84 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 143
||||||||||||||||||||||||||||| ||| ||| || | |||| || ||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 144 gagg 147
||||
Sbjct: 122 gagg 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||||| ||| | | || | ||||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| ||| | |||| | || || ||| ||||||||||||| ||| |||||
Sbjct: 128 cttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaat 69
Query: 61 gaatcta 67
|||||||
Sbjct: 68 gaatcta 62
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 95 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||||| ||||||| || | ||||||| |||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggaggga 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 83 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 142
|||||||||||| |||||||||||| ||| |||| ||||| | ||||||| |||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 143 ggaggga 149
|||||||
Sbjct: 122 ggaggga 128
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||| |||||||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaa 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 86 gattcattaacatcaatatgaatgtgggcaatgctagaa 124
||||||||| |||||||||||||||||| ||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaa 84
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa
Indica Group
Length = 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||||||| | | ||||||||||||||||| | ||||||||||| |||||
Sbjct: 7 cttcctccgttttataatgtaagactttctaacactttccacattcatctagat 60
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
|||||||||||||||||||||||| | ||| ||||||| || | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 142 cggagg 147
||||||
Sbjct: 120 cggagg 125
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 60.0 bits (30), Expect = 9e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggaggga 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 8
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 96 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| | ||| |||||| | ||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 102 tatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 90
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 141
||||||||||||||||||||||| | ||| |||||||||| | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 142 cggagg 147
||||||
Sbjct: 120 cggagg 125
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 90 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
||||||||| ||||| |||||| | |||||||||| | ||||||| ||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 98 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 109
Score = 50.1 bits (25), Expect = 9e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||| | |||| || ||||||||||||||
Sbjct: 59 atcaatatgaatgtgga-aatgctagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||||||||||||| | |||||||| | ||||||| ||||||| ||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagaggga 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 89 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||||| | ||||| || | ||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 8
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 97 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 122
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtctta 131
|||||||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtctta 93
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 103 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggaggga 8
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 taagactttctaacattgtccacattcat 48
|||||||||||||||||| ||||||||||
Sbjct: 26 taagactttctaacattgcccacattcat 54
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaat 60
|||||||||||| | | | |||||||||||| |||| ||| |||||||||||| ||||
Sbjct: 112 cttcctccgtttcatattataagactttctagcattacccatattcatatagatgataat 53
Query: 61 gaat 64
||||
Sbjct: 52 gaat 49
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
||||||||||||||||||| ||||| |||||||||| | ||||||| |||||||||||
Sbjct: 69 attcattaacatcaatatggatgtgaa-aatgctagaatgacttacattgtgaaacggag 11
Query: 147 g 147
|
Sbjct: 10 g 10
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 115 aatgctagaaagtcttacatcgtgaaacggaggg 148
|||||||||| | ||||||| |||||||||||||
Sbjct: 75 aatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctag 122
|||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 82 tctagattcattaacatcaatatgaatgtgggcaatgctag 122
|||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 93 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||||| |||||||||| |||||||||| |||| || ||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 81 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 140
||||||||||||||| ||| ||||| || |||||||| ||||| | ||||||| ||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 141 acggaggga 149
|||||||||
Sbjct: 16 acggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 1 cttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 54
|||||||||||| | | |||||| | ||||| ||||||| ||||||||||||||
Sbjct: 134 cttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagat 81
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 4 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 63
||||||||| | | |||||| | |||||| |||| ||| || ||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaa 69
Query: 64 tctaaacatatat 76
|||| || |||||
Sbjct: 70 tctagacttatat 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||| | ||||||||||| | ||||||| |||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggagg 131
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 114 caatgctagaaagtcttacatcgtgaaacggag 146
||||||||||||||||||||| |||||||||||
Sbjct: 56 caatgctagaaagtcttacattgtgaaacggag 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 105 gaatgtgggcaatgctagaaagtcttacat 134
|||| ||| |||||||||||||||||||||
Sbjct: 52 gaatatggacaatgctagaaagtcttacat 23
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 91 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 147
|||||||||||||||||||||| ||| ||| || | ||||||| ||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 87 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 146
|||||||||||||||||| || ||| |||||||||| | ||||||| |||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 147 g 147
|
Sbjct: 126 g 126
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 101 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||| |||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 106 aatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
|||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggaggga 146
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 98 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 149
||||||| || ||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
