miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| ||||||||||| |||||||| ||||||||| |||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||| ||||||||||| |||||||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggag 7
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||| ||| ||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | | |||||||||||||||||| || |||||||||||||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|| |||||||||||| |||||||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| ||||||||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggag 156
Score = 153 bits (77), Expect = 9e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | ||||||||||| || ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | | |||||||||||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||||||||| |||||||||||||||| |||||||||||| |||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| ||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggag 156
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | |||||||||||||| |||||||||||||||||||| ||
Sbjct: 159 ttactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||||||| | || | |||||||||||||||||||| |||||||||| | ||||
Sbjct: 99 aatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 138/152 (90%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | ||||||||||||||||||||||||||||| ||||||||||| | ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| ||||||||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggag 7
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | ||||||||||| || |||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | | |||||||||||||||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| |||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 138/153 (90%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||||||||||| |||| |||||||||||||||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| ||||||||| ||||||| ||||||||||||| |||||||| |||||| |
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 39 actagaaagtcttacattgtgaaacggagggag 7
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| | || ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || ||| || | |||||||||||||||||||| |||||||||||||||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 184 bits (93), Expect = 2e-46
Identities = 138/153 (90%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| | | |||||| ||||||| |||| |||||||||||||||| ||
Sbjct: 4 ttacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| |||||||| |||||||||||||||||||||| |||||||| || |||||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| ||||||||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagggag 156
Score = 153 bits (77), Expect = 9e-37
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| ||||| || |||||||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| |||| | |||||||||||||||||||| |||||||||||||||||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||| ||||||| |||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggagg 10
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 137/153 (89%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||||||||||| |||| ||| |||||||||||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| ||||||||| ||||||| ||||||||||||| |||||||| |||||| |
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagt 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 39 actagaaagtcttacatggtgaaacggagggag 7
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| || |||||||||||||| | || ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || ||| || | |||||||||||||||||||| |||||||| ||||||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 136/152 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||||||||| ||||| |||||| |||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||||| ||| | ||||||||||||||| |||| | |||||| |||||||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggag 156
Score = 161 bits (81), Expect = 4e-39
Identities = 132/149 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| ||||| ||| |||||| ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| | ||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 89
||||||||||| || ||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct: 139 tgtaagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatg 80
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct: 79 tgtgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattat 20
Query: 150 gaaacggagg 159
||||| ||||
Sbjct: 19 gaaaccgagg 10
Score = 127 bits (64), Expect = 5e-29
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | |||||||||||||| | ||| ||||||||||||| || |||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | ||| |||||||||| | ||| ||||||||||||||||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| |||||| |||||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggag 156
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||||||||||| ||||| ||| |||||| ||||| ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| |||||| | ||| | |||||||||||||||| ||||| | |||||||||
Sbjct: 64 aatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggag 156
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| |||| |||| | ||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||| | ||| | |||||||||||||||||||| | |||||| |||||||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||||| | |||| | ||||||||||||||||||||| |||||||||||| |||
Sbjct: 99 aatgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| |||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggag 7
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | | |||||||||||| |||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 135/152 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | |||||||||||||| | ||| ||||||| |||||||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| ||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggag 156
Score = 115 bits (58), Expect = 2e-25
Identities = 127/150 (84%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | |||||||||||||| ||||| ||||||||||||| || |
Sbjct: 159 ttactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgct 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| || | || | ||||||||||||||| ||| |||| |||||||||||
Sbjct: 99 aatgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaac 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||| ||||
Sbjct: 39 gctagaaagtcttacattatgaaacagagg 10
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 167 bits (84), Expect = 6e-41
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||||||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 2 taagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtg 61
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| |||||||||||||||| |||||||||||| || | ||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacataca 54
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 53 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtctta 2
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 135/152 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||||||||||| ||||| ||||||||| |||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| |||| || | |||||||||||||||| ||||||||| ||||||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggag 156
Score = 163 bits (82), Expect = 9e-40
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||||||||||| ||||| || ||||||||||||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| | | ||| ||||||||||||||||| |||| || ||||||||||||||
Sbjct: 99 aatgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 165 bits (83), Expect = 2e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtcta--gattcattaacatcaatatgaatgtgggcaa 128
||||||||| | |||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 129 tgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||| | ||||||||||||||
Sbjct: 125 tgctagaaagtcttataatatgaaacggagggag 158
Score = 119 bits (60), Expect = 1e-26
Identities = 117/135 (86%), Gaps = 2/135 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 71 atgaatctaaacatata--tgtgtgtctagattcattaacatcaatatgaatgtgggcaa 128
||||||||| ||| | | | | | | |||||||||||||||| ||||||||||||||||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 129 tgctagaaagtctta 143
|||||||||||||||
Sbjct: 40 tgctagaaagtctta 26
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 161 bits (81), Expect = 4e-39
Identities = 108/117 (92%)
Strand = Plus / Minus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 89
|||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||
Sbjct: 118 tgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatg 59
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 146
|||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 tgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacat 2
Score = 105 bits (53), Expect = 2e-22
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 89
|||||||||||||| ||||| |||||||||||| || ||||||||||| || | ||
Sbjct: 3 tgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacata 62
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 146
| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 63 tatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacat 119
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 132/149 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| ||||||||| || ||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||| ||||| |||||||||||||||||| | | ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagg 10
Score = 145 bits (73), Expect = 2e-34
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||||||||||| |||| |||||||||| ||| | ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| |||| | | | | | |||||||||||||||| ||||| || ||| ||||
Sbjct: 64 aatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| |||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||| ||||| |||||||||||||||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| ||||| ||| |||||||||||| |||||| |||||||||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| | ||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggag 7
Score = 137 bits (69), Expect = 5e-32
Identities = 117/133 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| ||||| |||||||||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||| ||| ||| |||| | ||||||||||||||| |||| ||||||||||||||||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 131 ctagaaagtctta 143
|||||||||||||
Sbjct: 125 ctagaaagtctta 137
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| ||||||||||| || ||||| ||| |||||| ||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| | ||||| ||||||||||||| || ||||| || || ||||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggag 7
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| ||||| || || |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||||| ||| | |||||||||||||||||||| | |||||| |||||||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| |||||||||||| ||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||| | | ||||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
Score = 131 bits (66), Expect = 3e-30
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| || ||||| | || |||||||||||| |||| |||||||||||| ||||
Sbjct: 99 aatgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||| | | ||||| ||||||||||||
Sbjct: 39 gctagaatgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | |||||| ||| |||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || |||||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggag 7
Score = 129 bits (65), Expect = 1e-29
Identities = 131/153 (85%)
Strand = Plus / Plus
Query: 7 tatttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| |||
Sbjct: 1 tatttactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 67 tttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggc 126
|||||||||||| | | |||| | |||||| |||||||||||||||||||||||||||
Sbjct: 61 gttaatgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtggga 120
Query: 127 aatgctagaaagtcttacatcgtgaaacggagg 159
||| ||||| | ||||||| ||||||||||||
Sbjct: 121 aatattagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/150 (88%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| ||||||||||| ||| |||| | |||||||| ||||| ||
Sbjct: 4 ttacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
||||||| || |||||| | |||| |||||||||||||||| ||||| ||||| |||||
Sbjct: 64 aatgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| ||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagg 153
Score = 131 bits (66), Expect = 3e-30
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||||||||||| ||||| ||||| ||||||||| ||
Sbjct: 159 ttacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||||||| || | |||||| ||||||||||||| | |||||||| ||||||
Sbjct: 99 aatgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
|| |||||||||||| || |||||||||
Sbjct: 39 attaaaaagtcttacattgtaaaacggagg 10
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 153 bits (77), Expect = 9e-37
Identities = 132/149 (88%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
Score = 137 bits (69), Expect = 5e-32
Identities = 133/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| || ||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 64 aatgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaat 122
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| |||||||||||||||
Sbjct: 123 gctagaatgacttacattgtgaaacggagggag 155
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 134/153 (87%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| ||||||||||| || ||| | ||||||| ||||| ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
||||||||||||||||| | | |||||||||| ||||||||| | ||| |||||||||||
Sbjct: 64 aatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| |||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggag 156
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| ||||| |||||| ||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| |||||| ||||||| | ||| |||||||||||||||| | ||||||| || |||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| |||||||||||| ||||||||||||
Sbjct: 38 ctataaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| ||||||||||| || ||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| | | | ||||| |||||||||||| |||||||| ||||||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| || ||||||||||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggag 7
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| |||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||| ||| | ||||| | |||||||||||||||||||| |||||||||||| ||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| |||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| ||||||||||| || ||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| | | | ||||| |||||||||||| |||||||| ||||||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| || ||||||||||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggag 156
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| |||| ||| |||||||||||| |||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||| ||| | ||||| | |||||||||||||||||||| |||||||||||| ||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| |||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 151 bits (76), Expect = 3e-36
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| ||||||||||||| || |||||||||||| | |||||| ||
Sbjct: 2 taagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatatg 61
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 135 bits (68), Expect = 2e-31
Identities = 101/112 (90%)
Strand = Plus / Minus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| |||||||||||||||| |||||||||||| || |||| |
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatata 54
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 53 tatctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 2
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 133/152 (87%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||||||||||| ||||||||||||||||||| || |||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| || | |||||||||||||||||||||||||| | |||||||
Sbjct: 96 atgaatctagacacgcatatac--ctagattcattaacatcaatatgaatataggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| ||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggag 7
Score = 131 bits (66), Expect = 3e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| ||||| | | |||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||
Sbjct: 65 atgaatctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| |||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacggagg 151
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 133/152 (87%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| ||||||||||| || ||||||||||||| || ||||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||| | ||| |||||||||||||||||| |||| |||||| |||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||| ||||||||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggag 7
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| |||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | ||| | | |||||||||||||| ||| | || ||||||| |||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| |||||||||||| ||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggagg 151
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| ||||| |||||| ||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || | ||| ||||||||||||||||||||||||| |||||||| |||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggag 156
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| |||| ||| |||||||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | | |||| ||||||||||||| ||||| ||||||||||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 143 bits (72), Expect = 8e-34
Identities = 135/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| |||| |||| ||| |||||||||||||| |||| |||||||||| ||||| ||
Sbjct: 4 ttactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaac--atcaatatgaatgtgggca 127
||||||||||||||||| | ||||| ||||||||||||| || ||||| ||||| |||
Sbjct: 64 aatgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagca 123
Query: 128 atgctagaaagtcttacatcgtgaaacggagggag 162
|||||| |||||||||||| |||||||||||||||
Sbjct: 124 atgctaaaaagtcttacattgtgaaacggagggag 158
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt- 68
||||| ||||||||| ||| ||||||||||| || ||||| ||||| |||||| || |
Sbjct: 161 ttactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatg 102
Query: 69 -taatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggca 127
||||||||||||||| ||| | ||| |||||||||||||||| | ||||||||||| |
Sbjct: 101 ttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggta 42
Query: 128 atgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||| ||||||| |||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacagagggag 7
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | ||||||||||| || |||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| |||||| | ||||| ||||||||||||||| |||| ||||||||||||||||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||| |||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggag 156
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||| | | | | |||||| |||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| |||||||||||| |||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 143 bits (72), Expect = 8e-34
Identities = 102/112 (91%)
Strand = Plus / Minus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgta 54
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|| |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 53 tgcctagattcattaacatatatatgaatatgggcaatgctagaaagtctta 2
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| ||| ||||||||| || |||||||||||| |||| || |
Sbjct: 2 taagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatata 61
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||| ||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | |||||||||||||||||| ||||||||||||||| |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| ||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||||||||||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | ||||||||||| || ||||| | |||||| ||||| |||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96 atgaatctagacatat--gtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||| ||||||| |||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggagg 10
Score = 129 bits (65), Expect = 1e-29
Identities = 131/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| ||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | | | |||||||||||||||||||| | |||||| | ||||||
Sbjct: 65 atgaatctagacacaca--tatgtctagattcattaacatctagatgaatataagcaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| |||||||||||| ||||||||||||||
Sbjct: 123 ctacaaagtcttacattatgaaacggagggag 154
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 132/153 (86%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| | | |||||| | ||||| ||||| |||||| |||||||| ||
Sbjct: 159 ttacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
||||||| || | ||| ||||||||||||||||||||||||| |||||||||| || |||
Sbjct: 99 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| ||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| |||| | |||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| | || | | |||| ||||||||||||| |||| ||||||||||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 132/153 (86%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | ||||| ||| | ||||||||||| ||||||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| | | |||| | |||||||||||||||| ||||||||||||||||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
| ||||| | ||||||| |||||||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggag 7
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | |||||||||| |||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||| ||||||||||||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | ||||||||||| ||||| ||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| |||||| |||||||| |||| | |||||||||||||| ||||||||||||||||||
Sbjct: 65 ataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||||||||||||| | | |||||||||||
Sbjct: 125 ctagaaagtcttataacttgaaacggagg 153
Score = 119 bits (60), Expect = 1e-26
Identities = 111/128 (86%)
Strand = Plus / Minus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtg 91
|||||||||||| ||||| ||||||||||||| || ||||||||||| || |||| |
Sbjct: 137 taagactttctagcattgcccacattcatatatatgttaatgaatcttggcacatatata 78
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||| |||||||| ||||||||||||||||||| ||||||||||| | | |||
Sbjct: 77 tgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataacttga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 137 bits (69), Expect = 5e-32
Identities = 132/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||||||| ||| |||||| | ||||| |||| || |||||||||| ||| |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || |||||||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatgtagacatatatatgt--ctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||| |||||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggag 154
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| |||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| ||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 96 atgaatctagacatatatatgt--ctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||| ||||||||
Sbjct: 38 ctagaatgacttacattgtggaacggagg 10
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||||||||| | | | | |||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| ||||| |||||||||||||||| | ||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||| ||| |||||||||||
Sbjct: 38 ctagaaagtcttgcattatgaaacggagg 10
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | || ||||||||||| |||| |||||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||||| |||| | |||||||||||||||||||| || | | | |||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||| |||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||||||||| ||||||||||||| || | |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| ||||| |||||||||| ||||| ||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| | ||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggag 156
Score = 123 bits (62), Expect = 8e-28
Identities = 116/134 (86%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | | |||||||||||| |||||||| ||||||||||| |
Sbjct: 159 ttactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtc 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||||||| |||| | |||||||||||||| |||| |||||||||||||||||
Sbjct: 99 aatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaat 40
Query: 130 gctagaaagtctta 143
| ||||||||||||
Sbjct: 39 gttagaaagtctta 26
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 131 bits (66), Expect = 3e-30
Identities = 102/114 (89%)
Strand = Plus / Minus
Query: 31 gtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgt 90
||||||||||||| ||| ||||||||||||||| | |||||||||| |||||||| |
Sbjct: 114 gtaagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatat 55
Query: 91 gtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttac 144
||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 54 gtgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtcttac 1
Score = 115 bits (58), Expect = 2e-25
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 31 gtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatgt 90
||||||||||||| ||| |||||||||||||||| |||||||||||| ||| |||| |
Sbjct: 1 gtaagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Query: 91 gtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttac 144
|||||||||||||| ||||| ||||||||||| | |||||||||||||||||
Sbjct: 61 atgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtcttac 114
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 129 bits (65), Expect = 1e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 71 atgaatctaaacatatatgtgtgtctagattca-ttaacatcaatatgaatgtgggcaat 129
||||||||| | |||| | ||||||||||| | |||||||| ||||||||||||| |||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||| | ||||||||||||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggag 7
Score = 113 bits (57), Expect = 8e-25
Identities = 130/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| |||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 71 a-tgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
| | |||||| ||| || | | |||||||||||||||||| |||||||||||||||||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||| | ||||||||||||||
Sbjct: 125 gctagaaagtcttataatctgaaacggagggag 157
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||||| |||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| || | ||||||| ||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggagg 10
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | || || |||| |||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||||||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||||| || ||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | | |||||||||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | |||| || |||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggag 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||||| | | ||||||||||||||||| ||||||||||||| || |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||||| | |||| || ||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | || | |||| ||||||| |||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggag 156
Score = 113 bits (57), Expect = 8e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||| | ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||||||||||||||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
| | || | ||||||| ||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
|||||||||||| ||| ||||||||||| |||||||| | | ||||||||||||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatatctatctagattcattaacaa 59
Query: 111 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||||||||||||||| |||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
| ||| | ||||||| ||||||||| ||||
Sbjct: 125 gtggaatgacttacattatgaaacggaaggag 156
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 109/124 (87%)
Strand = Plus / Minus
Query: 39 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 98
||||| |||| | ||||||||||| ||| |||||||||||||| | |||| | |||||||
Sbjct: 130 ttctagcatttttcacattcatattgatattaatgaatctaaatagatatatatgtctag 71
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||||||| |||||| |||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 159 ggag 162
||||
Sbjct: 10 ggag 7
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||| |||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | | |||||||||||| ||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | |||| || ||| |||||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggag 156
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 127 bits (64), Expect = 5e-29
Identities = 129/152 (84%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggag 147
Score = 105 bits (53), Expect = 2e-22
Identities = 124/149 (83%), Gaps = 9/149 (6%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 89 atgaatctagaa---------tgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | || || |||| |||||||||||| || |||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | ||||||| |||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggag 7
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | || || |||| |||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| || | |||| || ||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggagg 153
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 123 bits (62), Expect = 8e-28
Identities = 128/152 (84%), Gaps = 11/152 (7%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| ||||||||||||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggag 145
Score = 117 bits (59), Expect = 5e-26
Identities = 125/149 (83%), Gaps = 11/149 (7%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| ||||| |||||| ||||||||| |||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||||||||||||||||||||| | |||||||| ||||||
Sbjct: 87 atgaatcta-----------gtgtctagattcattaacatctaagtgaatgtgagcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 86 tatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttaca 145
|||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca 121
Query: 146 tcgtgaaacggagggag 162
| |||||||||||||||
Sbjct: 122 ttgtgaaacggagggag 138
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 71 atgaatcta 79
|| ||||||
Sbjct: 80 ataaatcta 72
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacatatatg 89
|||||| | |||||||||| |||||||||||||| | |||||||||||| | ||||||
Sbjct: 24 tgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatatata 83
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
|||||||||||||||||| | |||||||||||| |||||||||| | ||||||| ||
Sbjct: 84 gatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgt 143
Query: 150 gaaacggagggag 162
|||||||||||||
Sbjct: 144 gaaacggagggag 156
Score = 113 bits (57), Expect = 8e-25
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||||| | ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| |||| ||| | | |||||||||||||||| | ||||||||||||| |||
Sbjct: 99 aatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaat 40
Query: 130 gctagaaagtcttacat 146
| ||||| | |||||||
Sbjct: 39 gttagaatgacttacat 23
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 121 bits (61), Expect = 3e-27
Identities = 91/100 (91%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 46 attgtccacattcatatagattttaatgaatctaaacata--tatgtgtgtctagattca 103
|||| |||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 104 ttaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||||| ||||||||||||||||| |||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtctta 26
Score = 113 bits (57), Expect = 8e-25
Identities = 90/100 (90%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 32 taagactttctaacattgtccacattcatatagattttaatgaatctaaacata--tatg 89
|||||||||||| |||| |||||||||||||||| |||||||||||| ||| | ||||
Sbjct: 26 taagactttctagaattgcccacattcatatagatgttaatgaatctatacacacatatg 85
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaat 129
||||| |||||||||||||||| |||||||||||||||||
Sbjct: 86 tgtgtatagattcattaacatctatatgaatgtgggcaat 125
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||| ||||||||||||||| | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | |||| || ||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggagg 10
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||| |||| ||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| ||||||||||| || || ||||||||||| |||| |||||||| | | ||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggag 7
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | |||||||||| || | |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| || |||| | ||| || |||||||| |||| |||||||||||| ||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggag 7
Score = 113 bits (57), Expect = 8e-25
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | || || |||| ||||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| ||| || | |||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||| ||| ||||| || ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | ||||||| |||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 119 bits (60), Expect = 1e-26
Identities = 130/152 (85%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | |||||| ||| ||||||||||||| ||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||| ||||||||||||||||| ||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtggg-aaaa 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| ||||||| || ||||||||||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggag 7
Score = 111 bits (56), Expect = 3e-24
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
|||||||||||| ||| |||||||||||| | | |||| | |||||||||||||||||||
Sbjct: 44 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 103
Query: 111 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||| ||| ||||| | ||||||| |||||||||||||||
Sbjct: 104 caatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggag 155
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| || | |||||| | ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||||||||||||||||||||||||||| | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||| ||||
Sbjct: 38 gtagaatgacttacattgtgaaacggaaggag 7
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/145 (83%)
Strand = Plus / Plus
Query: 18 tccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaatc 77
||||||| ||| |||||| | ||||| |||| ||||||||||| ||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 78 taaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaa 137
|| | | |||| | |||||||||||||||| ||||| |||||| | | ||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 138 gtcttacatcgtgaaacggagggag 162
| ||||||| |||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||| | ||||||||||||||||||| |||||||||||| | ||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
Score = 107 bits (54), Expect = 5e-23
Identities = 126/150 (84%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | ||||| |||| ||||||||||| || ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtt 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| |||||||| | ||||||||||||||||| |||||||| |||| |||
Sbjct: 99 aatgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagg 159
||||||| | ||||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | || || |||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||| ||| | | | ||||||||| |||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggag 156
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||| |||||| |||||||||||||||||||| ||||||||||| | ||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|| || | |||||| |||||||||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggag 7
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| || || ||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||| | | |||||||||||||||||||| |||||||| | |||||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggag 7
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| ||||| | | |||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||||| | | | |||||||||||||||||| ||||||||||| ||| ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 117 bits (59), Expect = 5e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 88 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatc 147
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 81 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 22
Query: 148 gtgaaacggagggag 162
||||||||||||||
Sbjct: 21 atgaaacggagggag 7
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggag 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 117 bits (59), Expect = 5e-26
Identities = 129/152 (84%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| ||||||||||| || | ||| |||||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||| || | |||||||||||||||| |||| ||||||| | ||
Sbjct: 65 atgaatctagacatat----gtatttagattcattaacatctttatgtatgtgggtagtg 120
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| ||||||||| || |||||||||||||||
Sbjct: 121 ctaaaaagtcttatattgtgaaacggagggag 152
Score = 111 bits (56), Expect = 3e-24
Identities = 126/149 (84%), Gaps = 4/149 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | ||||||||| || || | |||||| |||| |||| |||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||||| | |||||| ||||||||||||||||| | |||||||||||||| |
Sbjct: 94 atgaatctaaatacatatgt----ctagattcattaacatctaaatgaatgtgggcaacg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| |||||||||||| ||||||||||||
Sbjct: 38 ctacaaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
|||||||||||| ||| |||||||||||||| | |||| | |||||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 33
Query: 111 caatatgaatgtgggcaatgctagaa 136
||||||||||||||| ||||||||||
Sbjct: 32 caatatgaatgtgggaaatgctagaa 7
Score = 107 bits (54), Expect = 5e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
|||||||||||| ||| |||||||||||| |||||||| | | | |||||||||||||||
Sbjct: 19 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaacat 78
Query: 111 caatatgaatgtgggcaatgctagaa 136
||||||||||||||| ||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||| |||| |||| || |||| ||| |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||||| |||||| | | |||||||||||||||||||||||||||||||| ||||
Sbjct: 96 atgaatctggacatat--gcctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggag 7
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/149 (82%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | || ||| | |||||||||||||||||||| || ||||| ||||
Sbjct: 65 atgaatctagataggcatatgt--ccagattcattaacatcaatataaacgtgggaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | |||| || ||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggagg 151
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 113 bits (57), Expect = 8e-25
Identities = 128/152 (84%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||| | ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatct------gtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||||||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggag 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/149 (82%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| |||| |||||||||||| ||| | |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| || ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 92 atgaatctagacagat------gtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||||| | ||||||| ||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| ||| ||| ||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || |||| ||| | | ||||||||||||||||||||||||||| | || ||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 9 tttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt 68
|||||||||||||||| ||| |||||| | ||||| |||| | | |||||||| ||| |
Sbjct: 3 tttacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgt 62
Query: 69 taatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaa 128
||||||||||| | | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 63 taatgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaata 122
Query: 129 tgctagaaagtcttacatcgtgaaacggagggag 162
|||||||| | ||||||| |||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| || ||| |||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||| ||||| ||| || |||||||||||||||| ||||| || |||| ||||||||||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 131 ctagaaagtctta 143
|||||||||||||
Sbjct: 125 ctagaaagtctta 137
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||||| || | | | |||||||||||| ||||| |||| |||| |||||| | |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||| || | |||| ||||| |||||||||| |||||||||| || ||
Sbjct: 98 atgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| ||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 66 tgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 125
Query: 150 gaaacggagggag 162
|||||||||||||
Sbjct: 126 gaaacggagggag 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 71 atgaatcta 79
|||||||||
Sbjct: 80 atgaatcta 72
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 102 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
|||||||||| |||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 59 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 118
|||| ||| |||||||||||| | | |||| | |||||||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 119 atgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||| ||| |||||| ||||||||| |||||||||||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggag 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||||| ||||| ||| |||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatat 116
||||||||| |||||||| | | |||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatat 53
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| || |||| | ||||||||||||||| |||||||||| ||||| | ||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | ||||||| |||||||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggag 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | || || |||| ||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | ||||||||||||||| || | |||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||||| ||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||| |||| | | |||| | ||||||||||||||| ||||||||||||| | | ||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | |||| || |||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggag 156
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| || | |||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | |||||| ||||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| || || ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||| | | | |||||||||||||||||| |||||||| | |||||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggag 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| ||||| | | |||||||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | ||| | | | |||||||||||||||||| ||||||||||| ||| ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 152 aacggagg 159
||||||||
Sbjct: 122 aacggagg 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 71 atgaatctaaacatat 86
|| |||||| ||||||
Sbjct: 74 ataaatctagacatat 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||| ||||||||| | | |||||||||||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggag 7
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 109 bits (55), Expect = 1e-23
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggca 127
|||||||||||| | | |||| | ||||||||||||||||||||| |||||||||||| |
Sbjct: 66 ttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaa 125
Query: 128 atgctagaaagtcttacatcgtgaaacggagggag 162
||||||||| | ||||||| |||||||||||||||
Sbjct: 126 atgctagaatgacttacattgtgaaacggagggag 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 127/153 (83%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatca----atatgaatgtgggc 126
||||||||| |||||||| | | ||||||||||||||||||| ||||||| || |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 127 aatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||| | ||||||| ||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 107 bits (54), Expect = 5e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
|||||||||||| ||| |||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 33
Query: 111 caatatgaatgtgggcaatgctagaa 136
||||||||||||| | ||||||||||
Sbjct: 32 caatatgaatgtgagaaatgctagaa 7
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 52 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 111
||||||||||| ||| |||||||||||| | | |||| | ||||||||||||||||||||
Sbjct: 20 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatc 79
Query: 112 aatatgaatgtgggcaatgctagaa 136
|||||||||||||| ||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 14 ttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatg 73
||||||||||| | | | |||| | ||||| ||||| |||||||||||||||| ||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 74 aatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgcta 133
||||| ||||||| |||| |||||||||||| ||| ||| ||||||||||||| |||
Sbjct: 68 aatctggacatata--tgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 134 gaaagtcttacatcgtgaaacggagggag 162
||| | |||| || |||||||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggag 154
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| |||||||| ||||||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| || |||| ||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 96 atgaatctagccacatatatgt--ccagattcattaacatctatatgaatgtgggcaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | |||| || |||||||||||
Sbjct: 38 ctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||| |||| ||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| |||||| | | |||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|| ||| | ||||||| |||||||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggag 7
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/152 (83%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||| | |||| ||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | | |||||| |||||||||||||| ||||| | ||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggag 154
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
||||||| |||| ||| ||||||||||| | |||||| | | ||||||||||||||| |
Sbjct: 118 ccacattaatattgatggtaatgaatctagaaatatatatctatctagattcattaacgt 59
Query: 111 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | | ||||||||||||| ||||||||| |||||||| |||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | |||| || |||||||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggag 156
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | || || ||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||||||||||||| | | | |||||||||||||||||| ||||| || |||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| | || ||| || ||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | ||| | | ||| ||||||||||| |||| ||||||||||||||||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | ||||||| ||||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggag 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|| |||||| | | |||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|| ||| | ||||||| |||||||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggag 154
Score = 97.6 bits (49), Expect = 5e-20
Identities = 127/152 (83%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||| | |||| ||| |||||||| ||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | | |||||| |||||||||||||| ||||| | ||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 127/152 (83%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||| |||||||||||||| ||||||||||||||| || ||||
Sbjct: 65 atgaatctagatatat------gtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | |||| || |||||||||||||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggag 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 124/149 (83%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| | |||||||||| ||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| | |||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||||||| |||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
||| || | |||| || ||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggagg 10
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | || || |||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | |||| | ||||||||||||||| ||||||||| |||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | |||| || |||||||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggag 156
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| ||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatata 87
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 125 gcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||||||| ||||||||||||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggag 120
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 150 gaaacggaggga 161
||||||||||||
Sbjct: 94 gaaacggaggga 105
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 16 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 75
||||||||| | | |||||||||||||| |||||||||||||||||||||| |||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 76 tcta 79
||||
Sbjct: 43 tcta 40
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctaaacatata 87
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 16 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 75
||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| | ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 76 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 135
|||| |||||||||| |||||||||||| | |||||||||||||| | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 136 aagtcttacatcgtgaaacggaggga 161
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 99.6 bits (50), Expect = 1e-20
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 72 tgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgc 131
|||||||| ||||| || | |||||||||||||| ||||||||||||||||| | |||||
Sbjct: 66 tgaatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgc 125
Query: 132 tagaaagtcttacatcgtgaaacggaggga 161
||||| | ||||||| ||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 127 aacggagggag 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 71 atgaatcta 79
|||||||||
Sbjct: 79 atgaatcta 71
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 88 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatc 147
|||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 66 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacatt 125
Query: 148 gtgaaacggagggag 162
||||||||||||||
Sbjct: 126 atgaaacggagggag 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | ||||| ||||| || ||||| |||||||||||||||| |||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 71 atgaat 76
||||||
Sbjct: 82 atgaat 77
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 125/152 (82%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||| |||||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggag 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 156 gagg 159
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||||||||| |||| ||||||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 71 atgaatctaaacatatatgtgtg 93
||||||||| |||||||| ||||
Sbjct: 65 atgaatctagacatatatatgtg 87
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 119
Query: 152 aacggagggag 162
||| |||||||
Sbjct: 120 aacagagggag 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatctaaacat 84
|||||||||||||| |||||||||||||||||||||| |||||||||||| ||||
Sbjct: 113 tgtaagactttctagcattgtccacattcatatagatgttaatgaatctagacat 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||| ||| | | |||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||| |||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggagg 10
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 17 aacggagggag 7
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 87 atgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 55 atgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 atgaatctaaaca 83
|||||||||||||
Sbjct: 72 atgaatctaaaca 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 116 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggag 7
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 97.6 bits (49), Expect = 5e-20
Identities = 96/112 (85%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 35 gactttctaacattgtccacattcatatagattttaatgaatctaaaca------tatat 88
||||||||||||||| |||||||||||| ||| |||||||||||| ||| |||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatcc 53
Query: 89 gtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 140
| | |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 95.6 bits (48), Expect = 2e-19
Identities = 97/112 (86%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 35 gactttctaacattgtccacattcatatagattttaatgaatctaaacatat----atg- 89
||||||||| ||||| |||||||||||| ||| |||||||||||| | |||| ||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctagatatatggatatta 60
Query: 90 -tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 140
|||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61 atgtgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 52 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 111
||||||||||||||| |||||||||||| ||||||| ||| || ||||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatgt--cttgattcattaacatc 58
Query: 112 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
| ||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 57 tacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | || || |||| |||||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||| | ||||||| | || |||||||||||||||| ||||||||||| ||||
Sbjct: 65 atgaatcaagacatata--tatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||| || | ||| ||| ||||||||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggag 154
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 97.6 bits (49), Expect = 5e-20
Identities = 125/149 (83%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | |||||||||| ||| ||| |||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||||| | | ||||||||||||| |||||||||||||||| | ||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| | ||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 125/152 (82%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| || |||||| | ||||| |||| ||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | | || | | ||||||||||||||||| ||||| ||| |||| ||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| |||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggag 155
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 97.6 bits (49), Expect = 5e-20
Identities = 125/152 (82%), Gaps = 10/152 (6%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||| |||||
Sbjct: 115 ctagaatgacttacattgtgaaacggggggag 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||| ||||| |||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||| |||| |||||||||| | ||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 154 cggagg 159
||||||
Sbjct: 130 cggagg 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 154 cggagggag 162
|||||||||
Sbjct: 126 cggagggag 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 137 ttactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 78
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 77 aatgaatcta 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 51 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 110
||||||| |||| ||| || ||||||||| |||||||| | | |||||||||||||||||
Sbjct: 45 ccacatttatattgatgtttatgaatctagacatatatttctatctagattcattaacat 104
Query: 111 caatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||| |||||||| ||||||| || | ||||| | ||||||||||||
Sbjct: 105 caatataaatgtgggaaatgctaaaatgacttactttgtgaaacggagg 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| ||||| | || || |||| ||||||| |||| ||| |||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | | | || | ||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
| | || | ||||| | |||||||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||| ||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggag 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||| |||||||||| ||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | ||||||| ||||||||||||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggag 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | |||||| | ||||| ||||| ||||| ||||| ||| |
Sbjct: 159 ttactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgct 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| | | |||| | |||||||||||||| |||| |||||||||||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| ||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 88 tgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 56 tgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 atgaatctaaaca 83
|||||||||||||
Sbjct: 72 atgaatctaaaca 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 116 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggag 7
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 95.6 bits (48), Expect = 2e-19
Identities = 82/93 (88%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 42 taacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagatt 101
|||||||| ||||||||||||| || |||||||||||| |||||||| | |||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctagacatatatat----ctagatt 57
Query: 102 cattaacatcaatatgaatgtgggcaatgctag 134
||||||||| ||||||||||||||||||||||
Sbjct: 58 cattaacatatatatgaatgtgggcaatgctag 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 45 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 104
||||| ||||||||||||| || |||||||||||| | |||||||| ||||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagatatatatgt----ctagattcat 31
Query: 105 taacatcaatatgaatgtgggcaatg 130
|||||| ||||||||||||||||||
Sbjct: 30 taacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 105
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 66 atgaatctagacat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 115 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggag 7
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||| ||||||||||||| |||||||||| | ||||||| ||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 156 gagggag 162
|||||||
Sbjct: 13 gagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 122
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatt 67
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatt 68
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||| ||||| ||||||| ||||||||||||||||| || ||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 156 gagggag 162
|||||||
Sbjct: 128 gagggag 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||||||||||| |||| |||||| ||||||||| |||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 71 atgaatctaaacatat 86
||||||||||||||||
Sbjct: 76 atgaatctaaacatat 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacatt 57
|||||||||||||| ||| | ||||||||| | |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagactttttggcattgtccacatt 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 118 aatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||| |||||| | ||||||||| || ||||||||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggagg 10
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||| ||||| ||||||| ||||||||||||||||| || ||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 156 gagggag 162
|||||||
Sbjct: 13 gagggag 7
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||||||||||| |||| |||||| ||||||||| |||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 71 atgaatctaaacatat 86
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacatt 57
|||||||||||||| ||| | ||||||||| | |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagactttttggcattgtccacatt 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 118 aatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||| |||||| | ||||||||| || ||||||||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggagg 131
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 156 gagggag 162
|||||||
Sbjct: 122 gagggag 128
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||| ||||||| || | |||| || ||||||| ||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagagg 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| |||| |||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 71 atgaatcta 79
|||||||||
Sbjct: 70 atgaatcta 62
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||||||||||||||||| |||||||||| | |||| || ||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 156 gagggag 162
|||||||
Sbjct: 132 gagggag 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 71 atgaatctaaacatat 86
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
|||||||||||||||||||||||||||| ||| |||||||||| | ||||||| |||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 153 acggagggag 162
||||||||||
Sbjct: 134 acggagggag 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 95 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 154
||||||| |||||||||||||| |||||| | |||||||||| | ||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 155 ggagg 159
|||||
Sbjct: 14 ggagg 10
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| ||
Sbjct: 146 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 87
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 86 aatgaatcta 77
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
|||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 158 gg 159
||
Sbjct: 11 gg 10
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
|||||||||||||||||||||||||| | |||||||||| | |||||| ||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 158 gggag 162
|||||
Sbjct: 135 gggag 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 70 aatgaatc 77
||||||||
Sbjct: 64 aatgaatc 71
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 54 tgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtga 113
Query: 152 aacgga 157
||||||
Sbjct: 114 aacgga 119
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||| ||||||| ||| |||||||||||||| ||||| |||||||||||| ||| ||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatacta 67
Query: 71 atgaatctaaacatatatgtg 91
|||||| || ||||| |||||
Sbjct: 66 atgaatttagacataaatgtg 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacatt 57
||||||||||| ||| | | |||||||||||||| |||||| ||||||
Sbjct: 4 ttacttcctccatttcataatgtaagactttctagcattgttcacatt 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 126 caatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||||||| ||||| |||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggagg 10
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 82 catatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtct 141
||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 87 catatatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtct 28
Query: 142 ta 143
||
Sbjct: 27 ta 26
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||| ||||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatcta 79
| |||||||
Sbjct: 65 acgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtctta 143
|||||||||||||||||||||||||||||||
Sbjct: 83 atatgaatgtgggcaatgctagaaagtctta 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 32 taagactttctaacattgtccacattcatata 63
|||||||||||| ||||| |||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 39 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 98
|||||||||| |||||||||||||| | |||||||||||| | |||||| |||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 41
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||||| | |||||||||||| ||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 39 ttctaacattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctag 98
||||| |||| ||||||||||||||| | |||||||||||| |||| ||| | | |||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||||| | ||||||||||||| |||| |||||
Sbjct: 63 attcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||||| || |||||||||| | ||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 154 cggagggag 162
|||||||||
Sbjct: 113 cggagggag 121
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
||||||||| |||||||||||||||||| |||||||||| | ||||||| ||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 158 gggag 162
|||||
Sbjct: 11 gggag 7
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 158 gggag 162
|||||
Sbjct: 132 gggag 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 71 atgaatc 77
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | |||||| | ||||| |||| | | ||||||||||| ||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtt 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
| |||||||| | | |||| | |||||||||||| |||| || ||||||||||||| |||
Sbjct: 64 agtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaat 123
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| ||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggag 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 120/147 (81%)
Strand = Plus / Minus
Query: 16 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 75
||||||||| | | |||||| | ||||| |||| |||||||||||| || ||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 76 tctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctaga 135
|||| |||||||| | | | |||||||| |||| || |||||||| | || |||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 136 aagtcttacatcgtgaaacggagggag 162
| | ||||||| ||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||| |||||||||||||||||||||||| |||||||||| | ||||||| ||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 156 gagg 159
||||
Sbjct: 138 gagg 141
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/152 (82%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||| |||||| | | | |||| | |||||||||||||||||||||||| || |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggag 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 120/149 (80%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| | || ||||||||||||| ||| |||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||| | || | | ||| | ||||||||| |||||||||||||||||| ||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 154 cggagggag 162
| |||||||
Sbjct: 15 ctgagggag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggagg 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
||||||||||| ||| | | |||||||||||||| ||||| ||||||||||||
Sbjct: 131 ttacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatcta 79
|||||||||||||| ||||| ||||||| ||| ||| ||||||||||||
Sbjct: 24 tgtaagactttctagcattgcccacatttttatggatgttaatgaatcta 73
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||||| |||| ||||| | |||| || ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 154 cggagggag 162
|||||||||
Sbjct: 125 cggagggag 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 105 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | |||||||||| |||||||||||| ||| |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 71 atgaatcta 79
|||||||||
Sbjct: 75 atgaatcta 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
||||||||||||||| ||| | |||| | ||||| |||| |||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatataagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 154 cggagggag 162
||||||||
Sbjct: 15 tggagggag 7
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 30 tgtaagactttctaacattgtccacattcatatagattttaatgaatcta 79
|||||||||||||| |||||||||||||||||||||| ||||| ||||||
Sbjct: 24 tgtaagactttctagcattgtccacattcatatagatgttaataaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 124 ggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||||||| ||||||||||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggag 122
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||| ||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 102 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||| |||||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||| |||||||||||||||||||||||| |||||||||| | ||||||| |||
Sbjct: 57 tgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatga 116
Query: 152 aacggagg 159
||||||||
Sbjct: 117 aacggagg 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 71 atgaatctaaacatatat 88
||| ||||| ||||||||
Sbjct: 69 atggatctagacatatat 52
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 83 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 142
|||||| | ||||||||||||||| |||| |||||||||||||||||| |||||||||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctt 116
Query: 143 acatcgtgaaacggagggag 162
| | ||||||||||||||
Sbjct: 117 ataatatgaaacggagggag 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| |||||||||||||||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 78 atgaatctagacatatat 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtctta 143
||||||||||||||||| ||||| |||||||
Sbjct: 56 atatgaatgtgggcaatactagatagtctta 26
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 154 cgga 157
||||
Sbjct: 15 cgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||| |||||||| ||| ||| |||||||||| | ||||||| ||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 156 gagggag 162
|||||||
Sbjct: 138 gagggag 144
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||||||||| ||||| |||||||||| ||||| |||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagatgtta 81
Query: 71 atgaatctaaacatat 86
|||||||||||||||
Sbjct: 80 ttgaatctaaacatat 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||| ||||||| | |||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 156 gagg 159
||||
Sbjct: 131 gagg 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||||||| ||| | |||| ||||||| ||||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcattggccacatacgtatagat 60
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 154 cgga 157
||||
Sbjct: 15 cgga 12
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||| |||||||| ||| ||| ||||||| || | ||||||| ||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 156 gagggag 162
|||||||
Sbjct: 138 gagggag 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||| ||||||| ||| |||||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||||| |||||||||||||||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 159 ggag 162
||||
Sbjct: 10 ggag 7
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||| || |||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 152 aacggagg 159
||||||||
Sbjct: 132 aacggagg 139
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||| |
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 150 gaaacggaggga 161
||||||||||||
Sbjct: 19 gaaacggaggga 8
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 16 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 75
||||||||| | | |||||||||||||| |||| ||| |||||||||||| |||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 76 tcta 79
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| |||||||| | | ||||||||||||| |||| ||||| ||||| |||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| ||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggag 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/153 (81%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| | | |||||| | ||||| ||| | ||||| ||||| ||| |
Sbjct: 159 ttactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgct 100
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| | | |||| | |||||||||||||| |||| |||||||||||| |||
Sbjct: 99 aatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaat 40
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| ||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||| || |||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 63 tgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtga 122
Query: 152 aacggagg 159
||||||||
Sbjct: 123 aacggagg 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 75 atgaatctagacatatat 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 112 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||| |||||||||| | ||||||| |||||| ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggag 7
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||| |||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 152 aacggag 158
|||||||
Sbjct: 125 aacggag 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 105 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||| |||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 17 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaat 76
|||||||| | | |||||||||||||| ||||||||| ||| |||||||| |||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 77 ctaaacata 85
||| |||||
Sbjct: 71 ctagacata 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
||||| |||||||| | | |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccacatttatatagat 60
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||||||||||||||||||||||| |||||||||| | |||| || ||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 156 gagggag 162
|||||||
Sbjct: 132 gagggag 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||| | ||||| |||| ||||||||||||| ||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 71 atgaatctaaacatat 86
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 97 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 156
|||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 157 agg 159
|||
Sbjct: 12 agg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||||||| |||||||||| | ||||| | |||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggt 63
Query: 70 aatgaatct 78
|||||||||
Sbjct: 64 aatgaatct 72
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 17 aacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| ||||||||||||| | |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||| || | ||||||||||||||||||| |||||||| ||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 156 gagggag 162
|||||||
Sbjct: 13 gagggag 7
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| ||||||| |||||| ||||| |||||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 71 atgaatctaaacatata 87
|||||||||||||||||
Sbjct: 65 atgaatctaaacatata 81
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 115 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||| | ||||||||||||||||| || ||| ||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggagg 133
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 116 aacggagggag 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||| ||||||||||||| | |||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 68 atgaatctagacat 55
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 116/142 (81%), Gaps = 15/142 (10%)
Strand = Plus / Plus
Query: 17 ctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaat 76
|||||||| ||| |||||| | |||||||||| |||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 77 ctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 71 ctaaacata--------tctagattcattaacatcaatatgaa-------aatgctagaa 115
Query: 137 agtcttacatcgtgaaacggag 158
| ||||||| |||||||||||
Sbjct: 116 tgacttacattgtgaaacggag 137
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 156 gag 158
|||
Sbjct: 13 gag 11
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||| ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggag 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||| |||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggagg 10
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||||||| ||| |||||||||||||| | ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||| ||||||||| ||| ||||||| |||||| ||||| ||||||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagat 65
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||
Sbjct: 60 tgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttga 119
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 120 aacggagggag 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| |||| ||||||||||||| || |||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 72 atgaatctagacatatat 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtctta 143
||||||||||||| ||| |||||||||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtctta 26
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||||||||||||| |||| ||||||| || | |||| || ||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtga 136
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 137 aacggagggag 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 87/105 (82%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||| ||||||||| ||| | |||| | || || |||| ||| |||||||| ||| ||
Sbjct: 150 ttactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtt 91
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaat 114
|||||||||| ||||||| | | |||||||||||||||||||||
Sbjct: 90 aatgaatctagacatata--tctatctagattcattaacatcaat 48
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||||||||||||| || | |||||||||| | ||||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatga 18
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 17 aacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 114 tatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||| |||||||||| | ||||||| || |||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggagg 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 55 attcatatagattttaatgaatctaaacatatatgtgtgtctagatt 101
|||||||| ||| |||||||||||| |||||||| | | ||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatctagatt 95
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||||||||||||||| | ||| ||| || | ||||||| ||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 135 aacggagggag 145
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||| |||| |||||||||||| | |||||||||| | ||||||| ||||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtga 125
Query: 152 aacggaggga 161
||||||||||
Sbjct: 126 aacggaggga 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 161
||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/149 (82%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| | |||||||||| || |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||||||| | |||||| ||| ||| |||||||||||| | |||||||||||| ||||
Sbjct: 96 atgaatctagatatatatatgt--ctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
| |||| | |||| || ||||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaacggagg 10
Score = 81.8 bits (41), Expect = 3e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | |||| |||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || |||||||| | | |||||||||||||||| | |||||||||| ||||
Sbjct: 65 atgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggag 154
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 83.8 bits (42), Expect = 7e-16
Identities = 125/153 (81%), Gaps = 11/153 (7%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| |||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtc-tagattcattaacatcaatatgaatgtgggcaat 129
||||||||| |||| | ||| |||||||||||||||||||||||| | |||
Sbjct: 65 atgaatcta----------tgtgacatagtttcattaacatcaatatgaatgtgagaaat 114
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
||||||| | ||||||| ||||||| |||||||
Sbjct: 115 gctagaatgacttacattgtgaaaccgagggag 147
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 156 gagg 159
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | |||||||||||||||||| |||||| |||||||| |||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 71 atgaatctaaacatatat 88
||||||||||||| ||||
Sbjct: 74 atgaatctaaacacatat 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 83 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 142
|||||| ||||| |||||||||||||||| |||| |||||||||||| |||||||||||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtctt 112
Query: 143 acatcgtgaaacggagg 159
| || || |||||||||
Sbjct: 113 atattgtaaaacggagg 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 119 atgtgggcaatgctagaaagtcttacatcgtgaaacggaggga 161
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 154 cggagg 159
||||||
Sbjct: 105 cggagg 110
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 71 atgaatcta 79
|||||||||
Sbjct: 55 atgaatcta 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 128 atgctagaaagtcttacatcgtgaaacggagggag 162
||||||||| | ||||||| |||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
|||||||||||||||||||||||||||| ||||||| || | ||||||| ||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 158 gg 159
||
Sbjct: 128 gg 129
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | || || |||| |||||||||||| ||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 71 atgaatc 77
|||||||
Sbjct: 74 atgaatc 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||| ||||| | || | ||||||| |||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggag 7
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||| | |||||||||| | |||| || ||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 154 cggagg 159
||||||
Sbjct: 117 cggagg 122
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 71 atgaatcta 79
|||||||||
Sbjct: 67 atgaatcta 59
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| |||| |||||||| |||| ||||||||||||||||| || |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 154 cggagggag 162
|||||||||
Sbjct: 130 cggagggag 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||||||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagactta 26
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | | |||| ||||||| ||||| || |||||||||||| |||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| |||| ||| |||||||||||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 71 atgaatcta 79
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/152 (81%), Gaps = 6/152 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| |
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
||||| |||||| | | | |||| | ||||||||||| |||||||||||| ||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
|||||| | ||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 120/149 (80%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| ||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||| | || | | ||| | ||||||||| |||||||||||||| ||| ||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 131 ctagaaagtcttacatcgtgaaacggagg 159
|||||| | ||||||| ||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagg 147
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 95 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 154
|||||||||||| |||||||||||||||||| ||||||| || | ||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 155 ggagg 159
|||||
Sbjct: 14 ggagg 10
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 102 cattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaaacggaggg 160
||||| |||||||||||||||||| ||||||| | | | ||||||| |||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 161 ag 162
||
Sbjct: 140 ag 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | || || |||| |||||||||||| ||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| ||| |||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 154 cggagggag 162
|||||||||
Sbjct: 122 cggagggag 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||||| |||| || || | ||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||| | | |||||||||| | |||| || ||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 154 cggagg 159
||||||
Sbjct: 136 cggagg 141
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||||||| |||| |||| | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaa 119
Query: 154 cggagggag 162
|||||||||
Sbjct: 120 cggagggag 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| || |||||| | ||||||||| ||||||||||||| ||| |||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 71 atgaatctaaacatatatg 89
||||||||| | |||||||
Sbjct: 70 atgaatctagatatatatg 52
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||||||||||||||||||||||| || |||||||||| | ||||||| |||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 159 g 159
|
Sbjct: 109 g 109
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 115 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| | |||||||||| ||| |||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 71 atgaat 76
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 159 g 159
|
Sbjct: 109 g 109
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
|||||||||| |||| ||| |||||||||||||| | ||| |||||||||||||||| ||
Sbjct: 115 ttacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatt 56
Query: 70 aatgaat 76
|||||||
Sbjct: 55 aatgaat 49
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
|||||||||||| ||||||||| || ||||||||| |||||||||||||||||| | |
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatat 20
Query: 150 gaaacggagggag 162
|||||||||||||
Sbjct: 19 gaaacggagggag 7
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||||||| | | | |||||||||||| ||||||||||||||||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagat 82
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | | |||||||||||| ||||||||||||||| |||||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 71 atgaatcta 79
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||| |||||||||||| ||||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtctta 116
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 95 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 154
|||||||||||| |||||||||||||||||| ||||||| || | ||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 155 ggagg 159
|||||
Sbjct: 134 ggagg 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 102 cattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaaacggaggg 160
||||| |||||||||||||||||| ||||||| | | | ||||||| |||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 161 ag 162
||
Sbjct: 8 ag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | || || |||| |||||||||||| ||| |
Sbjct: 144 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 84 aatgaatcta 75
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||||| |||| || || | ||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 154 cggagggag 162
|||||||||
Sbjct: 136 cggagggag 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||| | | |||||||||| | |||| || ||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 154 cggagg 159
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| ||| |||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 81
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 83 atatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 142
|||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 55 atatatgt-tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtctt 113
Query: 143 a 143
|
Sbjct: 114 a 114
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||| |||| | | | |||||||||||| ||||||||||||||||||| || |||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 71 atgaatcta 79
|||||||||
Sbjct: 75 atgaatcta 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtctta 143
||||||||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagg 127
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||| ||||||||| ||| |||| ||||||| || | ||||||| |||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtgg 18
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 17 aacggagggag 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||||||||||||| ||| |||||||| ||||| |||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||||||| | | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | ||||| |||| || | |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||| || ||| ||||| | |||| || ||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggagg 133
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||| ||||||||||| |||||||||||| | ||||||| |||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatga 119
Query: 152 aacggagg 159
|| |||||
Sbjct: 120 aatggagg 127
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||| ||| | | |||||| | ||||| ||||| ||||||||||||||| |||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 72 atgaatctagacatatat 55
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||| | || |||||||||| | ||||||| ||||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||||||||||||||||||||| ||||||||| | |||| || ||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 156 gagg 159
||||
Sbjct: 124 gagg 127
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||| ||| |||||||||||| ||| |||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 71 atgaatctaaacat 84
||||||||||||||
Sbjct: 72 atgaatctaaacat 59
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||| ||||||||| ||| |||||| | ||||| |||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||||||||||||||||||||||||| | ||| |||||| | ||||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| ||| ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatg 89
||||||||| ||| |||||
Sbjct: 65 atgaatctagacaaatatg 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 112 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||| | |||||||||| | ||||||| ||||| ||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggag 128
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 100 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||||||| |||||||||| | ||| ||| ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| || ||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaa 75
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||| ||||||||| |||||||||||| ||||||||||| ||||||| |||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatga 124
Query: 152 aacggagggag 162
|||||||||||
Sbjct: 125 aacggagggag 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 39 ttctaacattgtccacattcatatagattttaatgaatctaaacata 85
||||| |||||||||||||||||||||| ||||| |||||| |||||
Sbjct: 109 ttctagcattgtccacattcatatagatgttaataaatctagacata 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 116 tgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggagg 10
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 104 ttaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||| ||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 101 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||| ||||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| ||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 71 atga 74
||||
Sbjct: 70 atga 67
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctaga-aagtcttacatcgtgaa 152
|||||||||||||||||||||||||||||||| |||| |||| | ||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 153 acggagggag 162
||||||||||
Sbjct: 16 acggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||| |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 40 tctaacattgtccacattcatatagattttaatgaatcta 79
||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatcta 74
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 101 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 160
|||||| |||||||||||||||| | |||||||||| | ||||||||||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 161 ag 162
||
Sbjct: 8 ag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 97 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 156
|||||||||| |||||||||||||||| | |||||||||| | |||| || |||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 157 agg 159
|||
Sbjct: 128 agg 130
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 93 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
|||||||||||||| ||||||||||||| |||| ||| |||||| | ||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 153 acggagggag 162
||||||||||
Sbjct: 125 acggagggag 134
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 93 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
||||||||||||||||||| ||||| |||||||||||||||||| | |||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 153 acggagggag 162
|| |||||||
Sbjct: 121 acagagggag 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 39 ttctaacattgtccacattcatatagattttaatgaatcta 79
||||| ||||| |||||| ||||||||| ||||||||||||
Sbjct: 104 ttctagcattgcccacatgcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 101 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 160
|||||||||||||||||||||||| ||||||| || | ||||||| |||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 161 ag 162
||
Sbjct: 8 ag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 105 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||||| ||||||| || |||||| |||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggag 126
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| | || || |||| ||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 71 atga 74
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgga 157
|||||||||||||| |||||||||||| || ||||||||||||||| | | |||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 158 gg 159
||
Sbjct: 133 gg 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| | | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 140 ttacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtt 81
Query: 70 aatgaatc 77
||||||||
Sbjct: 80 aatgaatc 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||| |||||||| ||| || ||||||||||||||| | | ||||||||||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 32 taagactttctaacattgtccacattcatatagat 66
|||||||||||| || |||||| ||||||||||||
Sbjct: 26 taagactttctagcactgtccatattcatatagat 60
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||| ||||||||| ||| |||||||||| | ||||||| ||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 154 cggagg 159
||||||
Sbjct: 124 cggagg 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||| |||||||| || |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 71 atgaatcta 79
|||||||||
Sbjct: 74 atgaatcta 66
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 7 tatttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatata 63
|||||||| ||||||||| | | |||||| | ||||| |||| ||||||||||||||
Sbjct: 1 tatttactccctccgtttcataatgtaagtcattctatcattttccacattcatata 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||| |||| ||||| | ||||||| ||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| |||||||| ||||||||| ||||| | ||||||| || | |||||| ||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 154 cggagggag 162
|||||||||
Sbjct: 136 cggagggag 144
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||||| |||||||||||||| || |||||||||| | ||||||| |||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 159 g 159
|
Sbjct: 121 g 121
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||| ||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| | |||||||||| ||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 71 atgaat 76
||||||
Sbjct: 66 atgaat 61
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||| |||||||||||||| ||| || | |||||||||| | ||||||| ||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 154 cggagggag 162
|||||||||
Sbjct: 135 cggagggag 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 97 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 156
||||||||||||||| | || ||||||| |||| |||||||| ||||||| |||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 157 aggga 161
|||||
Sbjct: 111 aggga 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 120 tgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||| ||||||||||||| ||||||| |||||||||||||||
Sbjct: 49 tgtggacaatgctagaaagccttacattgtgaaacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 16 cctccgtttaacagtgtaagactttctaacattgtccacattcatatagattttaatgaa 75
||||||||| ||| |||||| ||||||| |||||||||||| || ||||| ||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 76 tct 78
|||
Sbjct: 53 tct 51
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccaca 55
|||| ||||||||| ||| |||||| ||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtccaca 49
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||||||||||||||||||||| ||| |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 159 g 159
|
Sbjct: 10 g 10
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||| |||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||||||||||||| ||| |||||||||| | ||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| ||| ||||| |||||||| |||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||||||| ||||||||||||| | |||||||||| | ||||||| |||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 159 g 159
|
Sbjct: 10 g 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||| ||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggag 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| ||||||||||| | | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 71 atgaatctaaacatatatg 89
|||||| || | |||||||
Sbjct: 65 atgaatatatatatatatg 83
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||| |||||||| || |||||||||||||||||||||| || ||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggag 106
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||| ||||||||| ||| |||||||||||||| ||||| || ||||||||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagat 53
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 126 caatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||| |||||| |||||||||||
Sbjct: 43 caatgctagaaagttttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 71 atgaatctaaacatata 87
||||||||| |||||||
Sbjct: 79 atgaatctagacatata 63
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||||||||||||||||||||| |||| ||||| | |||| || |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatga 126
Query: 152 aacggagg 159
||||||||
Sbjct: 127 aacggagg 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||| || |||||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
||||||||||||| ||||| |||| | ||||| ||| |||| |||||||| ||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 71 atgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||| || | | |||| | ||| ||||||||||| ||||||||||||| || | ||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 131 ctagaaagtcttacatcgtgaaacggagggag 162
||||| | |||| || ||| |||||||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggag 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 55 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 114
|||||||| ||| |||||||||||||||||||| | | |||| |||||||| |||||||
Sbjct: 114 attcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatcaat 55
Query: 115 atgaat 120
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||| | |||||||||||||| |||||||||| | ||||||| ||||
Sbjct: 58 tgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtga 117
Query: 152 aacggagg 159
||||||||
Sbjct: 118 aacggagg 125
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 71 atgaatctaaacatatatg 89
||||||||| |||||||||
Sbjct: 70 atgaatctagacatatatg 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||| | |||||||||| ||||||| ||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 100 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||| ||| |||||| | ||||||| ||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 100 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||||||| ||| ||||| | |||| || ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 160 gag 162
|||
Sbjct: 9 gag 7
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
|||||||||| |||||||||||||||||| |||| ||||||| || | ||| ||| ||||
Sbjct: 64 tgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtga 123
Query: 152 aacggagg 159
||||||||
Sbjct: 124 aacggagg 131
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||| ||||||||| | ||||||||| ||||| |||||||||||| || ||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 156 gagggag 162
|||||||
Sbjct: 116 gagggag 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| | ||||||||||||| |||| ||||||||| ||||| |||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 71 atgaatctaaa 81
|| ||||||||
Sbjct: 64 ataaatctaaa 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 115 atgaatgtgggcaatgctagaaagtcttacat 146
||||||||||||||||||| ||||||||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtcttacat 23
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt 68
|||||| ||||||| | | ||||||||||| || ||||| |||||||||| |||||||
Sbjct: 5 tacttcatccgttttataatgtaagactttttagcattgcccacattcatttagattt 62
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctag 134
|||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatg 130
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 tgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 156 gagggag 162
|||||||
Sbjct: 118 gagggag 124
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||||||||||||||| | ||||| |||||||||| ||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 156 gagggag 162
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||| ||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 142
||||||||||||||||| || || ||||||||||||||||| |||||||||
Sbjct: 91 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtctt 142
||||||||||||||||| || || ||||||||||||||||| |||| ||||
Sbjct: 51 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 33 aagactttctaacattgtccacattcatatagattttaatgaatctaaacat 84
||||||||| | ||||| ||||||||| ||||| |||||||||||| ||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctagacat 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 45 cattgtccacattcatatagattttaatgaatctaaacatat 86
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctagacatat 54
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||| |||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 129 tgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||| |||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggag 96
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||| |||||||| | | |||||||||||||| ||||| ||| ||||||||||||
Sbjct: 4 ttactttctccgtttcataatgtaagactttctagcattgcccatattcatatagat 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 tttacttcctccgtttaacagtgtaagactttcta 43
|||||| ||||||||| ||| ||||||||||||||
Sbjct: 100 tttactccctccgtttcacaatgtaagactttcta 66
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
|||||| |||||||||||||| | ||||| |||||||||| | ||||||| ||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 156 gagggag 162
|||||||
Sbjct: 131 gagggag 137
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 124/153 (81%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| | |||| | ||||| ||| |||||||||||| ||| |
Sbjct: 4 ttacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatact 63
Query: 70 aatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtgggcaat 129
|||||||||| | | |||| |||||||| |||| |||||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaat 120
Query: 130 gctagaaagtcttacatcgtgaaacggagggag 162
| | ||| | ||||||| ||||||||||||||
Sbjct: 121 ggtggaatgacttacattatgaaacggagggag 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| ||||||||||||||||| ||| |||||| | |||| || ||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 154 cggagg 159
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 97 agattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacgg 156
||||||||||| |||||| |||||||||| |||||||||| | |||| || |||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 157 agg 159
|||
Sbjct: 128 agg 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 101 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggaggg 160
||||||| |||||| |||||||| | |||||||||| | |||| || |||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 161 ag 162
||
Sbjct: 8 ag 7
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| | |||| | ||||| |||| ||||||||| || ||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 71 atgaatct 78
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 156 gagggag 162
|||||||
Sbjct: 13 gagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||| ||| |||||||||| | ||||||| ||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| ||| |||||| ||||| |||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 71 atgaatctaaacat 84
||||||||||||||
Sbjct: 64 atgaatctaaacat 77
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatat 62
|||||||||||||| ||| |||||| | ||||| |||| |||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 100 ttcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||| ||| |||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 160 gag 162
|||
Sbjct: 117 gag 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 112 aatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||| ||||||| || | ||||||| ||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | |||||||||| |||| |||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| |||||||||||||||||||||| ||| |||| ||||| | ||||||| ||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 154 cggagg 159
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||| || ||||||||||||| ||||| || || ||||||||| || ||||||||| ||
Sbjct: 63 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 122
Query: 150 gaaacggagg 159
||||||||||
Sbjct: 123 gaaacggagg 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||| || || ||||| || || ||||||||| |||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 71 atgaatctaaaca 83
|||||| ||||||
Sbjct: 77 atgaatttaaaca 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 125 gcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||| ||||| |||||| ||||||||||||||
Sbjct: 44 gcaatgctataaagtattacattatgaaacggagggag 7
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 90 tgtgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgt 149
||||| || ||||||||||||| ||||| || || ||||||||| || ||||||||| ||
Sbjct: 79 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 20
Query: 150 gaaacggagg 159
||||||||||
Sbjct: 19 gaaacggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||||| || || ||||| || || ||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 71 atgaatctaaaca 83
|||||| ||||||
Sbjct: 65 atgaatttaaaca 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 125 gcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||| ||||| |||||| ||||||||||||||
Sbjct: 98 gcaatgctataaagtattacattatgaaacggagggag 135
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatata 63
||||| ||||||||| | | | |||||||||||| ||||| |||||||||||||
Sbjct: 4 ttactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 gtgggcaatgctagaaagtctta 143
|||||||||||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtctta 83
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| |||||||||| | |||| || |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 7
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 110 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||| |||||||||| | |||| || ||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||||||||| |||| ||||| | ||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 154 cggagg 159
||||||
Sbjct: 120 cggagg 125
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||| |||||||||| | |||| || |||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggag 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | |||||| | ||||| |||| | ||||||||||| ||| |||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 71 atgaatcta 79
|||||||||
Sbjct: 70 atgaatcta 62
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct: 53 tgtctagattcattagcatcaatatgaatgtgagaaatgctagaa 97
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacat 146
|||||||| |||||||||||||||| | |||||||||| | |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 2
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| ||| ||||| |||||||| ||||||| |||||||||| | ||||||| ||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| ||||||||| ||||||| ||||||| || | |||| || ||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 154 cggagggag 162
|||||||||
Sbjct: 142 cggagggag 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| |||||||| ||||||| | |||||| | ||||||| || | ||||||| ||||||
Sbjct: 75 tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaa 16
Query: 154 cggagg 159
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||| |||||||||| |||||||||||| ||| |||||| | ||||||| |||||
Sbjct: 74 tctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatgaaa 133
Query: 154 cggagggag 162
| |||||||
Sbjct: 134 cagagggag 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||| |||||||||| |||||||||| | ||||||| |||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 8 atttacttcctccgtttaacagtgtaagactttctaacattgtccacattcata 61
||||||||||||||||| | | |||||| | ||||| |||| | ||||||||||
Sbjct: 2 atttacttcctccgtttcataatgtaagtcattctagcatttttcacattcata 55
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtc 140
||||||||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 49 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 50
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaa 137
||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 89 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 35 gactttctaacattgtccacattcatatagattttaatgaatctaaacat 84
||||||| | ||||| ||||||||| ||||| |||||||||||| ||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctagacat 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 45 cattgtccacattcatatagattttaatgaatctaaacatat 86
||||| ||||||||| ||||| |||||||||||| ||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctagacatat 86
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||| |||||||| ||||||||||||||| | |||||||||| | |||||| ||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 154 cggagggag 162
|||||||||
Sbjct: 136 cggagggag 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||| ||||||||| ||| || ||| |||||| | ||||||| ||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 154 cggagggag 162
|||||||||
Sbjct: 15 cggagggag 7
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||||||||||| | |||||||||| | ||||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 92 tgtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtga 151
||||||||||||||| ||||||||| ||| || | ||||||| || | ||||||| ||||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtga 18
Query: 152 aacggagg 159
||||||||
Sbjct: 17 aacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| ||||||| || | |||| || |||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggag 137
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa
Indica Group
Length = 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||||||| | | ||||||||||||||||| | ||||||||||| |||||
Sbjct: 5 tacttcctccgttttataatgtaagactttctaacactttccacattcatctagat 60
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||||| ||||||| || | ||||||| ||||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggag 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 95 ctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaac 154
|||||||||||| |||||||||||| ||| |||| ||||| | ||||||| |||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 155 ggagggag 162
||||||||
Sbjct: 122 ggagggag 129
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 96 tagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacg 155
||||||||||||||||||||||||||||| ||| ||| || | |||| || ||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 156 gagg 159
||||
Sbjct: 122 gagg 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| | |||| | || || ||| ||||||||||||| ||| ||
Sbjct: 131 ttacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtt 72
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||||| ||| | | || | ||||||| |||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||| |||||||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaa 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 98 gattcattaacatcaatatgaatgtgggcaatgctagaa 136
||||||||| |||||||||||||||||| ||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaa 84
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggag 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 7
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| | ||| |||||| | ||||||| |||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||||||||| | |||||||| | ||||||| ||||||| |||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggag 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 101 tcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||||| | ||||| || | ||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 8 atttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatt 67
||||||||||||||||| | | |||||| | || || || | ||||||||||||| |||
Sbjct: 2 atttacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatg 61
Query: 68 ttaatga 74
|||||||
Sbjct: 62 ttaatga 68
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggag 123
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
|||||||||||||||||||||||| | ||| ||||||| || | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 154 cggagg 159
||||||
Sbjct: 120 cggagg 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 9 tttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt 68
|||||||||||||||| ||| |||||| | || || |||| | ||| | ||||| ||| |
Sbjct: 132 tttacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgt 73
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 72 taatgaatcta 62
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 105 taacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||| |||||||||| |||||||||| |||| || |||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 93 gtctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaa 152
||||||||||||||| ||| ||||| || |||||||| ||||| | ||||||| ||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 153 acggagggag 162
||||||||||
Sbjct: 16 acggagggag 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagat 66
|||||||||||||| | | |||||| | ||||| ||||||| ||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagat 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||| ||||||||| | | |||||| | |||||| |||| ||| || ||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 71 atgaatctaaacatatat 88
||||||||| || |||||
Sbjct: 65 atgaatctagacttatat 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||| | ||||||||||| | ||||||| |||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggagg 131
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 114 tatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||| |||||||||| | ||||||| ||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcata 61
|||||||||||||| ||| |||||| | ||||| |||| |||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaa 153
||||||||||||||||||||||| | ||| |||||||||| | ||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 154 cggagg 159
||||||
Sbjct: 120 cggagg 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 9 tttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagattt 68
|||||||||||||||| ||| |||||| | ||||| |||| | ||| | |||| ||| |
Sbjct: 132 tttacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgt 73
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 72 taatgaatcta 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||||||| | ||| |||||| | ||||||| || ||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggag 7
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 102 cattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
||||||||| ||||| |||||| | |||||||||| | ||||||| ||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||| |||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 118 aatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggag 147
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 110 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||| |||||||||| | |||| || ||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||| | |||| || |||||||||||||||
Sbjct: 59 atcaatatgaatgtgga-aatgctagaatgacttatattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 110 tcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
||||||| || ||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtctta 143
|||||||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtctta 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 115 atgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagggag 162
|||||||||||||||| |||||||||||| | ||||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcat 60
|||| ||||||||| | | | |||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| | | | |||||||||||| |||| ||| |||||||||||| ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 71 atgaat 76
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
||||||||||||||||||| ||||| |||||||||| | ||||||| |||||||||||
Sbjct: 69 attcattaacatcaatatggatgtgaa-aatgctagaatgacttacattgtgaaacggag 11
Query: 159 g 159
|
Sbjct: 10 g 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| | ||||| ||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt-ttcacatccatattgatgtta 63
Query: 71 atgaat 76
||||||
Sbjct: 64 atgaat 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 127 aatgctagaaagtcttacatcgtgaaacggaggg 160
|||||||||| | ||||||| |||||||||||||
Sbjct: 75 aatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctag 134
|||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 94 tctagattcattaacatcaatatgaatgtgggcaatgctag 134
|||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 126 caatgctagaaagtcttacatcgtgaaacggag 158
||||||||||||||||||||| |||||||||||
Sbjct: 56 caatgctagaaagtcttacattgtgaaacggag 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 117 gaatgtgggcaatgctagaaagtcttacat 146
|||| ||| |||||||||||||||||||||
Sbjct: 52 gaatatggacaatgctagaaagtcttacat 23
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 103 attaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggagg 159
|||||||||||||||||||||| ||| ||| || | ||||||| ||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 10 ttacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttt 69
||||||||||||||| ||| |||||| | || || ||| ||||||||||||| ||| ||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtt 63
Query: 70 aatgaatctaaacata 85
||| ||| || |||||
Sbjct: 64 aataaatttatacata 79
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 99 attcattaacatcaatatgaatgtgggcaatgctagaaagtcttacatcgtgaaacggag 158
|||||||||||||||||| || ||| |||||||||| | ||||||| |||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 159 g 159
|
Sbjct: 126 g 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttaacagtgtaagactttctaacattgtccacattcatatagatttta 70
|||||||||||||| ||| |||||| | ||||| |||| | ||| || |||| ||| |||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 71 atgaat 76
||||||
Sbjct: 71 atgaat 66