miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;EU549299.1/339-148 3702:Arabidopsis thaliana (thale
cress)
Length = 192
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 222 atgcttggactgaagggagctccct 246
|||||||||||||||||||||||||
Sbjct: 157 atgcttggactgaagggagctccct 181
>RF00638;MIR159;ABIM01001344.1/11584-11387 3649:Carica papaya
(papaya)
Length = 198
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 164 tgcttggactgaagggagctccct 187
>RF00638;MIR159;AY884227.1/8-182 3694:Populus trichocarpa
Length = 175
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 150 tgcttggactgaagggagctccct 173
>RF00638;MIR159;AASG02011104.1/6116-5917 3988:Ricinus communis
(castor bean)
Length = 200
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctccct 189
>RF00638;MIR159;CU459032.2/137942-137752 3880:Medicago truncatula
(barrel medic)
Length = 191
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 157 tgcttggactgaagggagctccct 180
>RF00638;MIR159;CU570967.5/92301-92498 3880:Medicago truncatula
(barrel medic)
Length = 198
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 164 tgcttggactgaagggagctccct 187
>RF00638;MIR159;AM471650.2/47253-47061 29760:Vitis vinifera
Length = 193
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctccct 182
>RF00638;MIR159;AM458581.1/27231-27413 29760:Vitis vinifera
Length = 183
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctccct 172
>RF00638;MIR159;ABIM01013664.1/2939-3169 3649:Carica papaya (papaya)
Length = 231
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccctc 247
|||||||||||||||||||||||
Sbjct: 199 cttggactgaagggagctccctc 221
>RF00638;MIR159;AASG02014601.1/2536-2726 3988:Ricinus communis
(castor bean)
Length = 191
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccctc 247
|||||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctccctc 181
