miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00689;MIR390;AAAA02011305.1/16847-16930 39946:Oryza sativa
Indica Group
Length = 84
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 ggaacaatccttgaagctcaggagggatagcgcct 52
|||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaacaatccttgaagctcaggagggatagcgcct 36
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 158 gcgctatctatcctgagctccacggttcgttc 189
|||||||||||||||||||||| |||| ||||
Sbjct: 51 gcgctatctatcctgagctccatggtttgttc 82
>RF00689;MIR390;ABEU01005892.1/15773-15902 145481:Physcomitrella
patens subsp. patens
Length = 130
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 30 gaagctcaggagggatagcgcc 51
||||||||||||||||||||||
Sbjct: 117 gaagctcaggagggatagcgcc 96
