miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 117 bits (59), Expect = 3e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 82 attcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacggag 141
Query: 109 ggagtac 115
|||||||
Sbjct: 142 ggagtac 148
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattca 53
|||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgctcacattca 53
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| || ||||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||| |||||||||||||||||||||||
Sbjct: 136 tttcataatgtaagactttctagcattgc 108
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 109 bits (55), Expect = 8e-24
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 109 ggagtac 115
|||||||
Sbjct: 135 ggagtac 141
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 52 cattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgga 107
|||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| || ||||||
Sbjct: 129 tttcataatgtaagactttctagcattgcccacattcat 91
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||| |||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgc 44
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 87 atctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 143
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| || ||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| || ||||||
Sbjct: 131 tttcataatgtaagactttctagcattgcccacattcat 93
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 107 bits (54), Expect = 3e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatctat 64
|||| ||||| ||||| | |||| ||||||| |||||| | |||||||||||||||||||
Sbjct: 5 tactccctctgtttcatattgtatgactttcaagcatttcccatattcattaatatctat 64
Query: 65 atgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||| |||||||||| |||||||| ||||||||| |||||| |||| ||||
Sbjct: 65 atgaatgtgggcaacgctagaaagtcttacattgtgaaacagaggaagta 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatctat 64
|||||||||| |||||||||||||||||||||||| |||| || |||||| | || |
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 65 atgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||| || |||| |||||| |||| || |||| |||||||| |||||||||
Sbjct: 54 atgaatatgggaaatgcttgaaagtcatacaatatgaaacagagggagta 5
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 103 bits (52), Expect = 5e-22
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 3 gctacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatct 62
||||||||||| ||||| | | ||||||||||||||||||| ||||||||||| || |
Sbjct: 116 gctacttcctccgtttcatattataagactttctagcattgcccatattcattagcattt 57
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||| |||| ||||||| ||||| | ||||||||||||||||||
Sbjct: 56 atatgaatgtggacaatactagaaagtcttatagtatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 72 tgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 72 tgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 101 bits (51), Expect = 2e-21
Identities = 93/108 (86%), Gaps = 8/108 (7%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatat--------tcattaatatctatatg 67
||||| |||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct: 111 tttcataatgtaagactttctagcattgcttatatgtctagattcattaacatctatatg 52
Query: 68 tatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 51 aatgtgggcaatgctagaaagacttacattatgaaacggaggaagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 75 gcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggagta 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 101 bits (51), Expect = 2e-21
Identities = 102/116 (87%), Gaps = 6/116 (5%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat-ta-at---- 58
||||||||| |||||||||||||||||||||||| |||| || |||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatgagc 64
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 65 atctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
Score = 81.8 bits (41), Expect = 2e-15
Identities = 92/106 (86%), Gaps = 6/106 (5%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat-ta-at----atctatatgta 69
||||||||||||||| ||||||||||||| || |||||| || || ||||||||| |
Sbjct: 109 tttcacaatgtaagagtttctagcattgcccacattcatatagatgctcatctatatgaa 50
Query: 70 tgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||| |||||||| ||||||||| ||||||||||| |||||
Sbjct: 49 tgtgggcaacgctagaaagtcttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatcta 63
|||||||||| || |||||| ||||||||||||||||| |||| ||||||| | || ||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcattactcacattcatttagatgta 80
Query: 64 tatgt 68
|||||
Sbjct: 79 tatgt 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagattttctagcattgc 44
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| | ||||||| ||| ||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| ||||||||||||||||||||||| || ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||| ||||||| |||| ||||||
Sbjct: 16 tttcataatgtaagactttttagcattcctcacattcat 54
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggag 152
Query: 109 ggagtac 115
|||||||
Sbjct: 153 ggagtac 159
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| ||||||||||||||||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||| |||||||||||| ||||||
Sbjct: 147 tttcataatgtaagactttttagcattgctcacattcat 109
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 97.6 bits (49), Expect = 3e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 60 atctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtac 4
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 109 ggagta 114
||||||
Sbjct: 137 ggagta 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| || ||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||| |||
Sbjct: 93 attcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgag 152
Query: 109 ggagtaccc 117
|||||||||
Sbjct: 153 ggagtaccc 161
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||| |||||||||| |||||||| |||||||||||||||| |||
Sbjct: 70 attcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| |||||||||||||||||| |||| || ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 147 tttcataatgtaagactttttagcattgcccacattcat 109
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| || | ||||||||| ||| ||||||||||||||||||||
Sbjct: 91 attcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaaacggag 150
Query: 109 ggagta 114
||||||
Sbjct: 151 ggagta 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||| |||||||||| ||||||||
Sbjct: 145 tttcataatgtaagactttgtagcattgcttatattcat 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacagag 126
Query: 109 ggagtac 115
|||||||
Sbjct: 127 ggagtac 133
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| |||||| |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 60 atctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattg 43
|||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattg 94
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggag 152
Query: 109 ggagtac 115
|||||||
Sbjct: 153 ggagtac 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | ||| ||| ||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
||||||||| ||||||||||||||||||||||||||| | || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatt 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattg 43
||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattg 120
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 97 attaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggag 156
Query: 113 tac 115
|||
Sbjct: 157 tac 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgc 44
|||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgc 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| ||| || ||| ||| ||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagacttt 34
||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacttt 34
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||| ||| || |||||||||||||||| ||||||||| ||||||||||
Sbjct: 93 attcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgc 44
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgc 44
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcatt 55
||||||||||||||||||||||||||||| || |||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccaaattcatt 108
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctca 47
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctca 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||||||||| ||||| ||| |||| |||||| || ||| ||||||||| | ||||||
Sbjct: 72 atattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaaaacgg 13
Query: 107 agggagta 114
||| ||||
Sbjct: 12 aggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93 attcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| |||||||||| |||||||| |||||||||||||||| |||
Sbjct: 70 attcattagtatctatataaatgtgggcaacgctagaaagtcttacattatgaaacagag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgc 44
|||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgc 44
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| || ||||||
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcat 109
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || |||| |||||||||| |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||| ||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || |||||| | ||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||||||| | ||| |||||||||
Sbjct: 16 tttcacaatgtaagactttctagtactgcccatattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||||||| ||||| || ||||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccacattcat 109
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 109 ggagta 114
||||||
Sbjct: 131 ggagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||||||
Sbjct: 125 tttcacaatataagactttctagcatt 99
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatataagactttctagcatt 42
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| |||||| || ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattca 53
|||||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattca 53
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgc 44
|||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgc 119
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 154
Query: 109 ggagta 114
||||||
Sbjct: 155 ggagta 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| | | ||||||||||||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcat 54
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || || ||||||||||||| ||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| |||||||||||||||||||||||||||||||||
Sbjct: 147 tttcataatgtaagactttctagcattgctcatattcat 109
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||| |||| ||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 43 attcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 102
Query: 109 gga 111
|||
Sbjct: 103 gga 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattg 43
||||| ||||||||||||||||||||||
Sbjct: 97 tttcataatgtaagactttctagcattg 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 89 tcttacattatgaaacggagggagta 114
||||||||||||||||||||| ||||
Sbjct: 30 tcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || | |||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 91 attcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 150
Query: 109 ggagta 114
| ||||
Sbjct: 151 gaagta 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattg 43
|||||||||| ||||| ||||||||||||||||||||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattg 118
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| ||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcctatattcat 54
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||||| || ||||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
|||||||||| ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatt 108
Score = 69.9 bits (35), Expect = 7e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatat 50
|||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgctcatat 50
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| || |||||||||||| ||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | | ||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggag 153
Query: 109 ggagtac 115
|||||||
Sbjct: 154 ggagtac 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 54 ttaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagt 113
|||| ||||||||| ||||||| ||||||||||| ||||| | |||||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 114 a 114
|
Sbjct: 5 a 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||||||| |||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 113 ta 114
||
Sbjct: 136 ta 137
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||| || |||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 60 atctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 50 ttcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 109
|||||||| ||||||||| || |||||||| ||||||| ||||| |||||||||||||||
Sbjct: 69 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 10
Query: 110 gagtac 115
||||||
Sbjct: 9 gagtac 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||| |||| ||| ||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||| ||||||||||||| ||||| |||||||||
Sbjct: 16 tttcataatataagactttctagtattgcccatattcat 54
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||| || |||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || |||||||| ||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || |||||| | ||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||||||| ||||| |||||||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccatattcat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||| |||||||||||||||| | ||| |||||||||
Sbjct: 16 tttcaccatgtaagactttctagtactgcccatattcat 54
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 113 ta 114
||
Sbjct: 139 ta 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| || ||| ||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 60 atctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattg 43
||||||||||||||||||||||||||||
Sbjct: 129 tttcacaatgtaagactttctagcattg 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcatt 42
||||||||||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagactttttagcatt 42
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 73.8 bits (37), Expect = 4e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||| ||||||| ||||||| ||| ||||||||||||||||||||| |||||
Sbjct: 60 atctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||||||||||| |||||| || ||||||
Sbjct: 147 tttcacaatgtaagactttctaacattgcccacattcat 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| ||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcatt 42
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||| | |||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattg 43
||||||||| ||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattg 43
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 5e-16
Identities = 97/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 2 tgctacttcctctatttcacaatgtaagactttctagcattgctc-atattcattaatat 60
||||||| |||| |||||||||||||| | ||||||||| || | ||||||||||||
Sbjct: 2 tgctactccctccgtttcacaatgtaagtcattctagcatatatctagattcattaatat 61
Query: 61 ctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
| ||||| ||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 62 caatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||||| ||||||||| ||||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatt 55
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| || |||||||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||||||||||||||||||||| |||||
Sbjct: 147 tttcacaatgtaagactttctagtattgc 119
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| |||||||||| || ||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||| || |||||||||||| || ||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||||||| ||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagacttcctagcattgctcacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattca 53
||||||||||||||||||| || |||||| || |||||
Sbjct: 147 tttcacaatgtaagactttttaacattgcccacattca 110
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaag 132
Query: 113 ta 114
||
Sbjct: 133 ta 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 62 atatctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagtac 4
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcat 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 24 tgtaagactttctagcattgctcatattcat 54
|||||||||||||||||||| ||| ||||||
Sbjct: 24 tgtaagactttctagcattgttcacattcat 54
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 50 ttcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 109
|||||||| ||||||||| || |||||||| ||||||| ||||| |||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 153
Query: 110 gagtac 115
||||||
Sbjct: 154 gagtac 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||| |||| ||| ||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||| ||||||||||||| ||||| |||||||||
Sbjct: 147 tttcataatataagactttctagtattgcccatattcat 109
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 120
Query: 109 ggagta 114
| ||||
Sbjct: 121 gaagta 126
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaaatcttataatatgaaacggagggagtac 4
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||
Sbjct: 66 attaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggag 7
Query: 113 ta 114
||
Sbjct: 6 ta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 ggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 50 ttcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 109
|||||||| ||||||||| |||||||||||||||||| ||||| | |||||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 110 gagta 114
|||||
Sbjct: 9 gagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 2 tgctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||| ||||| | | ||||||||||||||||||| || ||||||
Sbjct: 161 tgctacttcctccgtttcatattataagactttctagcattgcccacattcat 109
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 2e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 26 taagactttctagcattgctcatattcattaatatctatatgtatgtgggcaatgctaga 85
|||||||||||| |||||| || |||||||| ||||||||| || |||| |||||||||
Sbjct: 26 taagactttctaacattgcccacattcattatcatctatatgaatatgggtaatgctaga 85
Query: 86 aaatcttacattatgaaacggagggagta 114
|| ||||| | ||||||||||||| ||||
Sbjct: 86 aagtcttataatatgaaacggaggaagta 114
Score = 69.9 bits (35), Expect = 7e-12
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatcta 63
|||||||||| ||||| | | ||||||||||||||||| | ||||||||| | ||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattacccatattcatatagatgat 56
Query: 64 tatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||| |||||||||||| |||||| ||||| | ||||||||||||||||||
Sbjct: 55 aatgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | |||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 109 ggagtac 115
| |||||
Sbjct: 127 gaagtac 133
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| | | ||||||||||||||||||| || ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcat 83
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| || |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 75 attcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggag 134
Query: 109 ggagtac 115
|||||||
Sbjct: 135 ggagtac 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||| ||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 4 ctacttcctctgtttcataatataagtctttctagcattgctcatattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || || ||||||||||||| |||| |||||||||| |||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||| ||||||||||||||||| | |||||||||
Sbjct: 129 tttcataatataagactttctagcattacccatattcat 91
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgga 107
|||||||| |||| ||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 61 attcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||||||||||||| || ||||||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcat 77
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 76 caatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggaggaagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggag 152
Query: 109 ggagtac 115
|||||||
Sbjct: 153 ggagtac 159
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || |||| || ||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||||||||||| ||||| | |||||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 109 ggagtac 115
| |||||
Sbjct: 127 gaagtac 133
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| | | ||||||||||||||||||| || ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcat 83
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 3e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcattaatatctatatgtatgtggg 75
|||||||||||||| | |||||||||| | || ||||||||| ||| ||||| |||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcattaacatcaatatgaatgtagg 75
Query: 76 caatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||| ||||
Sbjct: 76 aaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 91/112 (81%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatcta 63
|||||||||| |||||||||||||| | |||||||||| | | |||||| || |
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 64 tatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||| ||||||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 55 aatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||| |||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 68 attcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||||| || |||||| |||||||| ||| ||||||||| ||||||||||
Sbjct: 91 attcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaacggag 150
Query: 109 ggagta 114
| ||||
Sbjct: 151 gaagta 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattg 43
|||||||||| ||||||||||||||||||| ||||||||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattg 118
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||||||| ||||||| ||||| | |||||||| |||
Sbjct: 70 attcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaat 79
||||||||| ||||||||| |||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaat 125
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| ||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||| ||| | ||||||| |||||| ||||||||| ||||||||||
Sbjct: 93 attcattaacatctatgggtacataggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2 tgctacttcctctatttcacaatgtaagactttctagcattgc 44
||||||| |||| |||||||||||||||||||||| ||||||
Sbjct: 161 tgctactccctccgtttcacaatgtaagactttctaacattgc 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
||||||||| ||||| |||| |||||||||||||||| | || |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatt 55
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 77.8 bits (39), Expect = 3e-14
Identities = 77/90 (85%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 20 acaatgtaagactttctagcattgctcatattcattaatatctatatgtatgtgggcaat 79
||||||||||||||||||||||||||||||||| || || |||| |||| ||||
Sbjct: 93 acaatgtaagactttctagcattgctcatattc------atatagatgtttgtgtacaat 40
Query: 80 gctagaaaatcttacattatgaaacggagg 109
|||||||| | |||||||||||||||||||
Sbjct: 39 gctagaaagttttacattatgaaacggagg 10
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| || || ||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 53 atctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 60 atctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||| || ||| |||||||||||| ||||||||||||||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacggag 131
Query: 109 ggagta 114
|||||
Sbjct: 132 agagta 137
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||| |||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgc 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattg 43
||||| ||||||||||||||||||||||
Sbjct: 126 tttcataatgtaagactttctagcattg 99
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| |||||||||||| |||||| ||||| | ||||||||||||
Sbjct: 73 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 132
Query: 109 ggagta 114
||||||
Sbjct: 133 ggagta 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| |||||| ||||||||||| ||||| | ||||| | ||| ||||||||| ||||
Sbjct: 62 atatatatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| ||| |||||| ||||||||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | |||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 70 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||| |||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 62 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
|||||| ||||||||||||||||||| ||||| | | ||||| ||||| |||||
Sbjct: 82 tatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagtac 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| ||||| | | ||||||||||||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||| |||| |||||| | | ||||||||||||||||||| || ||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcat 85
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| ||||||| ||||||||||| ||||||||| |||||| |||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 103 atatatatatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
|||| ||||| ||||||||||||||||||||||||||| | || |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatt 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctca 47
||||||||||||||||||| ||||||||||||
Sbjct: 149 tttcacaatgtaagactttttagcattgctca 118
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 69 atctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||||||||||||||| |||||||||||||| |||
Sbjct: 67 attcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacagag 126
Query: 109 ggagta 114
||||||
Sbjct: 127 ggagta 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 60 tctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||||| || |||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 59 tctatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | |||||| ||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 63 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 122
Query: 109 ggagta 114
||||||
Sbjct: 123 ggagta 128
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||||||||||||| ||||||||||||||||||||
Sbjct: 60 atctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| ||||||||||||||||||||||| |||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccatattcat 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 79 tgctagaaaatcttacattatgaaacggagggagta 114
||||||||| ||||||||| ||||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggagta 98
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagca 40
|||||||||||||||||||||||||
Sbjct: 87 tttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || | ||||||||||||| |||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| ||| |||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||
Sbjct: 70 attcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||
Sbjct: 79 atatctatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagtac 137
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaactgagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||| ||||||||||||||||||||||| || ||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcat 81
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgc 44
||||| |||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgc 44
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| || | ||||||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| ||| |||||||| |||||||||||||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 62 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||||||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 71 gtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggag 11
Query: 109 g 109
|
Sbjct: 10 g 10
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| |||||||| | ||||||||||| |||||| |||| ||| ||||||||||
Sbjct: 91 attcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaacggag 150
Query: 109 ggagta 114
||||||
Sbjct: 151 ggagta 156
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 52 cattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggga 111
|||||| ||||||||| |||| || ||||||||| |||||||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacggaggga 8
Query: 112 gtac 115
||||
Sbjct: 7 gtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | |||||| || | ||||||||||||||||| ||||| |||||||| |||||
Sbjct: 93 attcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatgaagcggag 152
Query: 109 ggagtac 115
| |||||
Sbjct: 153 gaagtac 159
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 151
Query: 109 ggagtac 115
|||||||
Sbjct: 152 ggagtac 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| |||||||||| |||| ||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 152
Query: 109 ggagtac 115
|||||||
Sbjct: 153 ggagtac 159
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| |||| ||||| |||||||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| |||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 109
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 60 tctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 59 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||||||| || ||||||||| || ||||||||| ||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 109 ggagtac 115
| |||||
Sbjct: 132 gaagtac 138
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatat 50
||||||||| |||||||||||||||| || |||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatat 50
||||| ||||||| ||||| |||||||||||||||
Sbjct: 16 tttcataatgtaatactttatagcattgctcatat 50
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 7e-12
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattg----ctcatattcattaatatctatatgtatg 71
|||||||||||||| ||||||||||||| | || ||||||||| ||||| || |||
Sbjct: 16 tttcacaatgtaaggctttctagcattgtccacacagattcattaacatctaaataaatg 75
Query: 72 tgggcaatgctagaaaatcttacattatgaaacggaggga 111
||| |||| ||||||| |||||||| |||||||||||||
Sbjct: 76 tggacaatactagaaagccttacattgtgaaacggaggga 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 70 tgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| |||||||||||| |||||||| ||||||||||||||||||
Sbjct: 49 tgtggacaatgctagaaagccttacattgtgaaacggagggagtacc 3
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggaggga 111
||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||| ||||||||||||| |||||| ||||| ||| | ||||||||
Sbjct: 69 attcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggag 128
Query: 109 ggagta 114
| ||||
Sbjct: 129 gtagta 134
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| |||||| || |||||| |||||||||||| ||||| | ||||||||||||||||
Sbjct: 66 attaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaacggagggag 7
Query: 113 tac 115
|||
Sbjct: 6 tac 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||| |||||| |||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 82 atctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||||||||||| || ||||||||| || ||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 60 tctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 83 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagta 137
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatat 50
||||||||| |||||||||||||||| || |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatat 50
||||| ||||||| ||||| |||||||||||||||
Sbjct: 126 tttcataatgtaatactttatagcattgctcatat 92
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| |||| ||||| |||||||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| ||| |||||| |||||||| ||||||||||
Sbjct: 93 attcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||| |||| ||||||||| || ||| ||||||||||| ||||||||||||||||||||
Sbjct: 70 attcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaacggag 11
Query: 109 gga 111
|||
Sbjct: 10 gga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcatt 42
||||| |||||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 tcttacattatgaaacggagggagta 114
||||||||||||||||||||| ||||
Sbjct: 83 tcttacattatgaaacggaggaagta 108
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||| | |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| | |||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||| || |||||||||| |||||||||||||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggag 117
Query: 109 ggagta 114
||||||
Sbjct: 118 ggagta 123
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| |||||||||||| |||||||||||||| ||||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggag 126
Query: 109 ggagta 114
| ||||
Sbjct: 127 gaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||| |||||||| | |||||||||||| || ||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcat 83
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| |||||||||| |||||||| ||| ||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| || || | |||||||||| |||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 120
Query: 109 ggagta 114
||||||
Sbjct: 121 ggagta 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 3 gctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||||| |||| ||||| |||||||| | |||||||||| |||||||||||
Sbjct: 128 gctactccctccgtttcataatgtaagtcattctagcatttctcatattcat 77
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| |||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| |||||||||| |||||||||||||||||||
Sbjct: 73 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 132
Query: 109 ggagta 114
||||||
Sbjct: 133 ggagta 138
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
|||||||| ||||| |||||| ||||||| || |||||||| ||||||||||||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggag 7
Query: 113 ta 114
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 84 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 143
Query: 109 ggagta 114
||||||
Sbjct: 144 ggagta 149
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||| ||||||| ||||||||||| ||||| | | ||||||||||
Sbjct: 67 attcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacggag 126
Query: 109 ggagta 114
||||||
Sbjct: 127 ggagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 62 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
|||||| ||||||| ||| ||||||| ||||| | ||||||||||||| |||||
Sbjct: 57 tatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | ||| ||||| ||||||| |||||||||| |||||||||||||||||||
Sbjct: 87 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 146
Query: 109 ggagta 114
||||||
Sbjct: 147 ggagta 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | ||| ||||| ||||||| |||| ||||| |||||||| ||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||| || ||||||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| | |||| || || |||||| | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| ||| ||||| |||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| |||||||||| |||| ||| ||||||||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| |||| |||||||||||| | ||||| ||| ||||| ||| ||||||||||
Sbjct: 89 attcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacggag 148
Query: 109 ggagta 114
||||||
Sbjct: 149 ggagta 154
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcatt 55
||||||||| ||||||||||||||||||| |||| |||| || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatt 55
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| || |||||| |||||| |||||||||||| |||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaaagtctta 2
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 75 gcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 44 gcaatgctagaaagacttacattatgaaacggagggagtac 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctca 47
||||| |||||||| |||||||||||||||||
Sbjct: 72 tttcataatgtaagtctttctagcattgctca 41
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 80 gctagaaaatcttacattatgaaacggagggagta 114
|||||||| |||||||||||||||||||| ||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| || |||||| || |||||||||||||||| |||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaaagtctta 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 26 taagactttctagcattgctcatattcat 54
||||||||||||||||||| |||||||||
Sbjct: 2 taagactttctagcattgcccatattcat 30
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||
Sbjct: 81 atattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 140
Query: 107 agggagtac 115
||||||||
Sbjct: 141 ggggagtac 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 93
||||||||| || |||||| ||||||||||||||||||| |||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaaagtctta 2
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||||||||||||| ||||| |||| || |||||||||| |||||||| ||||||||
Sbjct: 59 atattcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgg 118
Query: 107 agggagta 114
||| ||||
Sbjct: 119 aggaagta 126
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||| || ||||| |||||| | ||||| |||||||||| |||||||| ||||||||
Sbjct: 72 atattaatgaatatatatatgaacgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 107 agggagtacc 116
||||||||||
Sbjct: 12 agggagtacc 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatt 89
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgc 44
||||||||| |||||||||||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattgc 100
Score = 60.0 bits (30), Expect = 7e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||| ||| ||||| ||| |||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 75 attcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacggag 133
Query: 109 ggagta 114
| ||||
Sbjct: 134 gaagta 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||| |||||||||||| |||| ||| ||||||||||| ||||
Sbjct: 60 atctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattg 43
||||||||| ||||||||| |||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcattg 43
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 84 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtacc 116
| ||||||
Sbjct: 10 gaagtacc 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||||||| |||||||| ||||||||||
Sbjct: 74 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 133
Query: 109 ggagtac 115
|||||||
Sbjct: 134 ggagtac 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 72 tgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| | |||||||||
Sbjct: 128 tttcacaatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 52 cattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggga 111
|||||| ||| ||||| ||||||| |||||||||| |||||||||||||||||||| |
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 112 gta 114
|||
Sbjct: 127 gta 129
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | || |||||| |||||||||||| |||||| ||||| | ||||||||||||
Sbjct: 70 attcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | ||||||||| | ||| |||| ||||||| ||||| | ||||||||||||
Sbjct: 93 attcattgacatctatatgaagatggacaattctagaaagtcttataatatgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagt 113
||||| ||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 60 tctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||||| || | || |||||||||| |||||||||||||||||||||||||
Sbjct: 59 tctatatgaatataggaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gtagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcatt 103
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||| || ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 93 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatt 107
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| | |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 72 tgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 97 tgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || || | |||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
||||| |||||||| | |||||||||| |||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattcat 54
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||| |||||| |||||||||||| ||||| | |||||||| |||
Sbjct: 70 attcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaacagag 129
Query: 109 ggagtac 115
| |||||
Sbjct: 130 gaagtac 136
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 62 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||||||| ||||||||||| ||||| | || |||||||||| ||||
Sbjct: 57 tatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattg 43
|||||||||| ||||| | | ||||||||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattg 97
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| || |||||||
Sbjct: 91 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggag 150
Query: 109 ggagtac 115
|||||||
Sbjct: 151 ggagtac 157
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
|||||||
Sbjct: 10 ggagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||||||| |||||||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacggag 134
Query: 109 ggagta 114
| ||||
Sbjct: 135 gaagta 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| | |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||| ||| ||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 134
Query: 109 ggagtac 115
|||||||
Sbjct: 135 ggagtac 141
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||| ||||||| |||||||||| |||||||| ||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| | |||||||||| ||||||| ||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggag 135
Query: 109 ggagtac 115
|||||||
Sbjct: 136 ggagtac 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcat 100
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||| || || |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | | ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| |||| | ||| ||||||||||||||||||
Sbjct: 93 attcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggaa 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | ||||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | ||||||| ||||||| |||| ||||| ||||||||||| ||||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaa 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 60.0 bits (30), Expect = 7e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 58 tatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| ||||| |||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 69 tatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 58 tatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| ||||| |||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||| || || |||||||||||||||||||
Sbjct: 81 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 140
Query: 109 ggagta 114
||||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||||||||| |||||| ||||||||||| | |||||| ||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacggag 11
Query: 109 ggagtacc 116
| ||||||
Sbjct: 10 gaagtacc 3
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||||||| |||| ||||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 113 ta 114
||
Sbjct: 6 ta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 56 aatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||||| ||||||| |||||||||| |||| ||| ||||||||||| ||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gaagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || ||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtacc 116
||||||||
Sbjct: 10 ggagtacc 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| |||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 97 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 156
Query: 109 ggagta 114
||||||
Sbjct: 157 ggagta 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcat 54
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || |||||| ||||||||||||||||||| ||||| | ||||||||||
Sbjct: 93 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacggag 152
Query: 109 ggagta 114
| ||||
Sbjct: 153 gtagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| || |||||| ||||||||||||| ||||| ||||| | ||||||||||| ||
Sbjct: 66 attaacatatatatgaatgtgggcaatgccagaaagtcttataacttgaaacggaggaag 7
Query: 113 ta 114
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| |||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| |||||| |||| ||||| |||||||| ||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||||||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 129
Query: 109 ggagta 114
| ||||
Sbjct: 130 gaagta 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
|||| |||| ||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatt 98
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| ||||||| || |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 54 ttaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagt 113
|||| ||| ||||| ||||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 114 ac 115
||
Sbjct: 5 ac 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 51 tcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 110
||||||| ||| ||||| ||||||| |||||||||| |||||||| |||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 111 agta 114
||||
Sbjct: 127 agta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatt 93
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||| ||||| |||||||| ||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 130
Query: 109 ggagta 114
||||||
Sbjct: 131 ggagta 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 54
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| ||||| || |||| |||||||||| |||||||| ||||||||||| ||||||
Sbjct: 62 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtacc 3
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 atgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||| ||||||||||||||||||||||||||
Sbjct: 41 atgctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgga 107
||||| ||| ||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 60 atctaaatgaatgtgggcaatgctaaaaagtcttacattataaaacgga 12
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||||| ||| ||||| ||||| |||||| ||||| ||| ||||||||||||||
Sbjct: 63 attaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacggagggag 122
Query: 113 tac 115
|||
Sbjct: 123 tac 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 22 aatgtaagactttctagcattgctcatattcatt 55
||||||||||||| ||||||||| || |||||||
Sbjct: 22 aatgtaagactttttagcattgcccacattcatt 55
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 58 tatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| ||||| |||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 61 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 58 tatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| ||||| |||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 69 tatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 atgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||||||||||||||||||||||||| ||||
Sbjct: 77 atgctaaaaaatcttacattatgaaacggaggaagta 113
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 76 caatgctagaaaatcttacattatgaaacggagggagtacc 116
|||||||||||| ||||||||| |||||||||| |||||||
Sbjct: 56 caatgctagaaagtcttacattgtgaaacggagagagtacc 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattc 52
|||||||| | ||||| |||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctatgtttcataatgtaagactttctagcattgtccatattc 52
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattg 43
||||||||||||||||||||||||||||
Sbjct: 83 tttcacaatgtaagactttctagcattg 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 76 caatgctagaaaatcttacattatgaaac 104
|||||||||||| ||||||||||||||||
Sbjct: 43 caatgctagaaagtcttacattatgaaac 15
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 71 gtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||||||||||||||| ||||| | ||||||||||||| |||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagtac 88
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtacc 3
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 51 tcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 110
||||||| ||| ||||| |||||| |||||||||| |||||||| ||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 111 agta 114
||||
Sbjct: 8 agta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcatt 115
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 87 atatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagtacc 116
|||||||||| | |||||||| ||||||||||||||||||
Sbjct: 42 aatgctagaataacttacattgtgaaacggagggagtacc 3
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 134 cttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcattaatatctatatgtatgtggg 75
|||||||||||||| | |||||||||| ||| ||||||||| ||| ||||| |||||
Sbjct: 101 tttcacaatgtaagtcattctagcattt-tcacattcattaacatcaatatggatgtgaa 43
Query: 76 caatgctagaaaatcttacattatgaaacggagggagtac 115
|||||||||| |||||||| ||||||||||| |||||
Sbjct: 42 -aatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtacc 116
| ||||||
Sbjct: 10 gaagtacc 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || ||||| ||||| | |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcat 109
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 134 cttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcatt 94
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcattaatatctatatgtatgtggg 75
||||||||||||| | |||||||||| |||| |||||||| ||| ||||| |||||||
Sbjct: 16 tttcacaatgtaactcattctagcatttctcacattcattagcatcaatatgaatgtggg 75
Query: 76 caatgcta 83
|||||||
Sbjct: 76 aaatgcta 83
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| ||||||||| ||||||||||| ||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatt 95
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaa 87
||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 42 attcattaacatccatatgaatgtgggcaatgctagaaa 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaa 87
||||||||| ||| ||||| |||||||||||| ||||||
Sbjct: 71 attcattaacatccatatgaatgtgggcaatgttagaaa 109
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||| ||| ||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 109 ggagtac 115
|||||||
Sbjct: 135 ggagtac 141
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||| ||||||| |||||||||| |||||||| ||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 tcttacattatgaaacggagggagtac 115
|||||||||||||||||||||||||||
Sbjct: 87 tcttacattatgaaacggagggagtac 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 82 tagaaaatcttacattatgaaacggagggagtac 115
|||||| ||||||||||| ||||||||| |||||
Sbjct: 37 tagaaagtcttacattataaaacggaggaagtac 4
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||| ||| ||||| ||||||| |||||||||| ||||| || ||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 113 tac 115
|||
Sbjct: 136 tac 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacatt 97
||||| ||||||||||||||||||| |||||||||
Sbjct: 35 atatgaatgtgggcaatgctagaaagtcttacatt 1
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 59 atctatatgtatgtgggcaatgctagaaaatcttacatt 97
||||||||| |||||||||||| |||||| |||||||||
Sbjct: 82 atctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 aatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||||||| || ||||||
Sbjct: 1 aatgtaagactttctagcattgcccacattcat 33
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| ||||| ||||||| || ||| |||||||||||||||
Sbjct: 91 attcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggag 150
Query: 109 ggagtac 115
|||||||
Sbjct: 151 ggagtac 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||| ||| ||||||| ||||||| || |||||||| ||||||||||
Sbjct: 70 attcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 52 cattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggga 111
|||||| ||| ||||| |||||| |||||||||| |||||||| |||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 112 gta 114
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatatt 51
||||||||| ||| | ||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcattgctcatatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 75 gcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||||| ||||| ||||| ||||||||| ||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| | ||| ||| |||||||||||||||||| |||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcat 56
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 60 tctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||||| |||||| ||||||| ||| ||||| | ||||||||||||||||||
Sbjct: 59 tctatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 77 aatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| |||| || |||||||||| |||| ||| ||||||||||
Sbjct: 87 attcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacggag 146
Query: 109 ggagta 114
||||||
Sbjct: 147 ggagta 152
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||| |||||||||||||| | |||||||||| |||| ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 54
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagtac 115
| |||||
Sbjct: 10 gaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| | | ||||| ||||||| ||| |||||| |||||||| ||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || ||| |||||||||| |||||||| ||||||||||
Sbjct: 80 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 139
Query: 109 ggagta 114
||||||
Sbjct: 140 ggagta 145
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| | |||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||| || |||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| | |||||||| ||||||||||||||||
Sbjct: 42 aatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||| ||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 119 aatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagtac 115
||||||||||||||||||||||||||
Sbjct: 112 cttacattatgaaacggagggagtac 137
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| |||| || ||| |||||||||| |||||||| ||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacggag 140
Query: 109 ggagta 114
||||||
Sbjct: 141 ggagta 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcat 54
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||| ||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 62 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| ||||||| |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtacc 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||||||| |||| ||||||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||| | ||||||| || |||||||| ||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 17 ttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||| |||||||| || ||||||
Sbjct: 90 ttcacaatgtaagactttccagcattgcccacattcat 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatctt 92
||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 44 attcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaa 102
||||| |||||||||||||| |||| ||||||||| ||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 90
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| || |||| ||| |||||| |||||||||||||||||||
Sbjct: 71 attcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggag 130
Query: 109 ggagta 114
||||||
Sbjct: 131 ggagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||| |||||||||||||| |||||| ||| |||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtaattctagtatttctcatattcat 54
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||| |||||||||| |||| ||| || |||||||
Sbjct: 93 attcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacggag 152
Query: 109 ggagtac 115
|||||||
Sbjct: 153 ggagtac 159
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 53 attaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggag 112
||||||||| |||| |||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 113 ta 114
||
Sbjct: 6 ta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 56 aatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||||| ||||| ||||||| |||||||||| |||| ||| ||||||||||| ||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| ||||| ||||||| || |||||| | |||||||| | ||||||||
Sbjct: 69 attcattaatatcaatatgaatgtggg-aaaactagaataacttacattgtaaaacggag 11
Query: 109 ggagta 114
||||||
Sbjct: 10 ggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| ||| ||||| |||||||| ||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggag 151
Query: 109 ggagta 114
||||||
Sbjct: 152 ggagta 157
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 62 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
|||||| ||||| | |||||||||| | |||||||| ||||||||||| |||||
Sbjct: 57 tatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| |||||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatt 93
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| | |||| ||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctca 47
||||||||| |||||||||||||| | |||||||||| ||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctca 84
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| || || ||||||| |||||||||| |||| ||| ||||||||||
Sbjct: 70 attcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggag 129
Query: 109 ggagta 114
| ||||
Sbjct: 130 gaagta 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 51 tcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 110
||||||||||| || || ||||| | |||||||||| |||| ||| ||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 111 agta 114
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| ||||||| |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtacc 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 57 atatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||| ||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 75 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatt 95
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 17 ttcacaatgtaagactttctagcattgctcatattcat 54
||||||||||||||||||| |||||||| || ||||||
Sbjct: 50 ttcacaatgtaagactttccagcattgcccacattcat 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaa 102
||||| |||||||||||||| |||| ||||||||| ||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtcttacattgtgaa 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatc 90
||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 96 attcattaacttctatgtgaatgtgggcaatgctggaaaatc 137
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| | ||| |||||| |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||| | |||||||||| |||||||||||||| ||||||||||
Sbjct: 79 atatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| |||||| ||| |||||||| ||||||||||
Sbjct: 91 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 150
Query: 109 ggagta 114
||||||
Sbjct: 151 ggagta 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatattcat 54
||||||||| |||||||||||||| | |||||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 54
Score = 50.1 bits (25), Expect = 7e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||||||||| | | ||||| ||||| | |||||||||| |||||||| ||||||||
Sbjct: 72 atattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 13
Query: 107 agggagtac 115
||| |||||
Sbjct: 12 aggaagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 93 aatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagtac 115
||||||||||||||||||||||||||
Sbjct: 104 cttacattatgaaacggagggagtac 129
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| |||| ||||| |||| ||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggag 129
Query: 109 ggagta 114
||||||
Sbjct: 130 ggagta 135
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| ||||||| || |||||||| ||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 109 ggagta 114
| ||||
Sbjct: 129 gaagta 134
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||||||||| |||||| || ||||||||| ||||| | ||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Query: 109 ggagta 114
| ||||
Sbjct: 134 gaagta 139
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 104 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| || ||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| ||||||| ||||||| || |||||||| ||||||||||| ||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtacc 3
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| |||||| |||| ||||| |||| ||||||||||||||
Sbjct: 74 attcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacggag 133
Query: 109 ggagta 114
| ||||
Sbjct: 134 gaagta 139
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 71 gtgggcaatgctagaaaatcttacattatgaaacggagggagtac 115
||||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 131 cttacattatgaaacggagggagta 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| |||| ||||| ||||||| ||| |||||| |||| ||| ||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 64 tatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
|||| ||||||| ||| |||||| ||||||||||||||| |||||||||||
Sbjct: 94 tatgaatgtgggaaatactagaatgacttacattatgaaacagagggagtacc 146
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 7e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 51 tcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 110
||||||| ||| ||||| |||||| ||||||| || |||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 111 agtac 115
|||||
Sbjct: 8 agtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 ttacattatgaaacggagggagtacc 116
||||||| ||||||||||||||||||
Sbjct: 105 ttacattgtgaaacggagggagtacc 130
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 50.1 bits (25), Expect = 7e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 50 ttcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 109
|||||||| ||| ||||| ||||||| |||||||||| ||| |||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 110 gagta 114
||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagta 114
|||||||||||||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcatt 97
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 71 gtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatatt 51
|||||||||||||| | |||||||||| ||||||||
Sbjct: 134 tttcacaatgtaagtcattctagcatttctcatatt 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||| ||||||| ||||||| || |||||||| ||||||||||| ||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtacc 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 108 aatgctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 cttacattatgaaacggagggagtaccc 117
|||||||| |||||||||||||||||||
Sbjct: 70 cttacattgtgaaacggagggagtaccc 97
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctag 84
||||||||| || |||||| ||||||||||||||||
Sbjct: 55 attcattaacatatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| |||||| |||||||||| |||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||||| ||||||||| |||| ||| ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 109 ggagta 114
| ||||
Sbjct: 127 gaagta 132
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 51 tcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 110
||||||| ||| ||||| |||||| || ||||||| |||||||| ||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 111 agta 114
||||
Sbjct: 149 agta 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 47 atattcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacgg 106
||||||||||| ||| ||||| ||| || ||||||||| |||||||| ||||||||
Sbjct: 91 atattcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacgg 150
Query: 107 agggagta 114
||||||||
Sbjct: 151 agggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || | || |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcattgctca 47
|||||||||| |||||||||||||| | |||||||||| ||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctca 47
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| |||| ||||| ||||| | |||||||||| |||| ||| ||||||||||
Sbjct: 70 attcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 109 ggagtacc 116
| ||||||
Sbjct: 10 gaagtacc 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| |||||| |||| ||||| |||||||| ||||||||||
Sbjct: 93 attcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggag 152
Query: 109 ggagta 114
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 69 atgtgggcaatgctagaaaatcttacattatgaaacggagggagtacc 116
||||||| ||| |||||| | |||||||| ||||||||||| ||||||
Sbjct: 50 atgtgggaaatactagaataacttacattgtgaaacggaggaagtacc 3
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| |||| ||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 63 atatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
||||| ||||||| |||||||||| |||| ||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| |||| ||||| |||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 109 ggagta 114
| ||||
Sbjct: 125 gaagta 130
>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
sylvaticum
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 95 attatgaaacggagggagtaccc 117
|||||||||||||||||||||||
Sbjct: 24 attatgaaacggagggagtaccc 2
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 127 tttcacaatgtaagtcattctagcatttctcacattcat 89
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcattgctcatatt 51
||||||||| |||||||||||||| | || ||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatt 51
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 76 caatgctagaaaatcttacattatgaaacggagggagta 114
|||||||| || |||||| | ||||||||||||||||||
Sbjct: 33 caatgctaaaagatcttataatatgaaacggagggagta 71
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagtac 115
|||||||||| |||||||| |||||||||||||||||
Sbjct: 119 aatgctagaatgacttacattgtgaaacggagggagtac 157
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagtac 115
|||||||||| |||||||| |||||||||||||||||
Sbjct: 79 aatgctagaatgacttacattgtgaaacggagggagtac 117
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagtacc 116
|||||||| ||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtacc 3
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||| | ||| ||||| ||||| | |||||||||| |||||||| ||||||||||
Sbjct: 93 attcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 109 gga 111
|||
Sbjct: 153 gga 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcat 109
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2 tgctacttcctctatttcacaatgtaagactttctagca 40
|||||||||||| |||||||||||||| | ||||||||
Sbjct: 2 tgctacttcctccgtttcacaatgtaagtcattctagca 40
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tttcacaatgtaagactttctagcattgctcatattcat 54
|||||||||||||| | |||||||||| |||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| |||| || ||| ||||||| || |||||||| ||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacggag 140
Query: 109 ggagta 114
||||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || ||| |||||||||| |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| ||||||||||||||||||| |||||
Sbjct: 92 aatgctagaatgacttacattatgaaacggagagagta 129
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagtac 115
|||||| |||| ||||| | |||||||||||||||||||
Sbjct: 93 aatgcttgaaagtcttatagtatgaaacggagggagtac 131
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 64 tatgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagta 114
|||| ||||||| |||||||||| |||||||| ||||||||||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 ctacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatt 58
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
|||| ||||| |||||||||||||| | ||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||||||| |||| ||| || | |||||||||| |||| ||| ||||||||||
Sbjct: 70 attcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 109 gga 111
|||
Sbjct: 10 gga 8
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| | ||| ||| || |||||||| ||||||||||
Sbjct: 82 attcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggag 141
Query: 109 ggagtac 115
|||||||
Sbjct: 142 ggagtac 148
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagtac 115
|||||||||| |||||||| |||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| ||||| | |||||||||| |||| ||| ||||||||||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 121
Query: 109 ggagtac 115
| |||||
Sbjct: 122 gaagtac 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtggg 75
||||||||| |||||||||||||||||
Sbjct: 27 attcattaacatctatatgtatgtggg 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtggg 75
||||||||| |||||||||||||||||
Sbjct: 37 attcattaacatctatatgtatgtggg 63
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagtac 115
|||||||| |||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| ||||||| || |||||||| ||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 109 ggagta 114
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 90 cttacattatgaaacggagggagtac 115
|||||||| |||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcatt 71
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||||||||||| ||||||||
Sbjct: 109 aatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 aatgctagaaaatcttacattatgaaacggagggagta 114
|||||||||| |||||||| ||||||||||||||||
Sbjct: 102 aatgctagaatgacttacattgtgaaacggagggagta 139
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
|||||||| ||| ||||| ||||||| ||||||| || |||||||| ||||||||||
Sbjct: 78 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 137
Query: 109 ggagta 114
| ||||
Sbjct: 138 gaagta 143
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||| |||| |||||||||||||| | ||||||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 tcttacattatgaaacggagggagta 114
||||| ||||||||||||||||||||
Sbjct: 112 tcttatattatgaaacggagggagta 137
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatt 41
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 49 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 108
||||||||| ||| ||||| || |||| ||||||| || |||| ||| ||||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggag 143
Query: 109 ggagta 114
||||||
Sbjct: 144 ggagta 149
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tacttcctctatttcacaatgtaagactttctagcatt 42
||||||||| |||||||||||||| | ||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatt 93
