miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 97/110 (88%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||||||||||||||||||||| |||||| | |||| ||||| |||||||| |||
Sbjct: 53 atatatatgttaataaatctagacatatatatgtgccaagattcattaacatatat---- 108
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 109 atgaatgtgggcaatgctagaaagtcttataacttgaaacggaggtagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 93/110 (84%), Gaps = 4/110 (3%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| ||||| | | |||| |||| |||||||||||||||| |||
Sbjct: 110 atatatatgttaatgaatcttggcacatatatatgtctagatttattaacatatat---- 55
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||| ||||||| ||||||| ||||| ||||| ||||
Sbjct: 54 atgaatgtgggcaatgccagaaagtcttataacttgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 105 bits (53), Expect = 2e-22
Identities = 81/90 (90%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat---- 84
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
||||||||||||||||||||||||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| ||||||| | |||| ||| ||||||| |||||||| |||||||
Sbjct: 86 atatagatgttaatgaatctaggcacatatatatatctagattcattaacatatatatga 27
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
||| |||||||||||||||||| ||||
Sbjct: 26 atg----tgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 97.6 bits (49), Expect = 5e-20
Identities = 80/90 (88%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| |||||||| || ||||| |||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatctat---- 84
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
||||||||||||||||||||||||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
|||||||||| |||||||||||||| ||||
Sbjct: 30 atgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| ||||||| ||| || |||||||||||| ||||||||||||
Sbjct: 29 atatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctat---- 84
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
||||||||||||||||||||||||| ||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttat 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 78/90 (86%), Gaps = 4/90 (4%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| ||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 86 atatagatgttaatgaatctaggcatatatgtatgcctagattcattaacatatat---- 31
Query: 117 atgaatgtgggcaatgctagaaagttttat 146
|||||| |||||||||||||||||| ||||
Sbjct: 30 atgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 87.7 bits (44), Expect = 5e-17
Identities = 129/154 (83%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| ||||||| |||| |||||||||| || |||||| |||
Sbjct: 15 gtttcatattataagactttctagcattgccca--cattcatatagat--gttaatgaat 70
Query: 75 ctagatatatatgtatgccta--gatttattaacatctatatgaatgaatgtgggcaatg 132
||| |||||||||| || || |||| |||||||||||||||| ||||||||||||
Sbjct: 71 ctatatatatatgtgtgtgtatagattcattaacatctatatga----atgtgggcaatg 126
Query: 133 ctagaaagttttataacctgaaatggaggtagta 166
||||||||| |||||| ||||| ||||| ||||
Sbjct: 127 ctagaaagtcttataatatgaaacggagggagta 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/73 (86%), Gaps = 4/73 (5%)
Strand = Plus / Minus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataacctga 153
|||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||
Sbjct: 73 tagattcattaacatctatatgaatg----tgggcaatgctagaaagtcttataatatga 18
Query: 154 aatggaggtagta 166
|| ||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/152 (83%), Gaps = 7/152 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| |||||||||||| |||||||||| || | | ||| |||
Sbjct: 15 gtttcatattataagactttctagcattaccca--cattcatatagatgt-taaattaat 71
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||||| | || ||| ||||||| |||||||||||||||| ||||||||||||||
Sbjct: 72 ctagacacctacatatatctagattcattaacatctatatga----atgtgggcaatgct 127
Query: 135 agaaagttttataacctgaaatggaggtagta 166
||||||| |||||| |||||| ||||| ||||
Sbjct: 128 agaaagtcttataatctgaaacggagggagta 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 126/153 (82%), Gaps = 9/153 (5%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||| ||||||| ||||| ||||||| |||| |||||||||| || |||||| |||
Sbjct: 149 gtttcagattataagactttctagcattgccca--cattcatatagat--gttaatgaat 94
Query: 75 ctagatatatatgtatgcctagatttatt-aacatctatatgaatgaatgtgggcaatgc 133
|||||||||| | || ||||||| ||| |||||||||||||||| |||| |||||
Sbjct: 93 ctagatatatgtaggtgtctagattaatttaacatctatatgaatg----tgggtaatgc 38
Query: 134 tagaaagttttataacctgaaatggaggtagta 166
|||||||| |||||| ||||| ||||| ||||
Sbjct: 37 tagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 85 atgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 81 atatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaag 140
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 86 atatatgtatgcctagattcgttaacatctatatg----aatgtgggcaatgctagaaag 31
Query: 141 ttttataacctgaaatggaggtagta 166
| |||||| ||||| ||||| ||||
Sbjct: 30 tcttataatatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||||||||| ||||| ||||||| ||| |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgccc--acattcatata 57
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
|||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 104 atgttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatg 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| | | || ||| ||||||| |||||||||||| |||
Sbjct: 53 atatagatgttaatgaatctagacacacatatatatctagattcattaacatctatgtga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||||||| || ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
Score = 63.9 bits (32), Expect = 7e-10
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| | | || ||| ||||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatctagacacacatatatttctagattcattaacatctatatga 112
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||
Sbjct: 113 ----atgtgggcaatgctagaaagt 133
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||||||| || ||||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| | | || ||| ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagacacacatatatttctagattcattaacatctatatga 51
Query: 117 atgaatgtgggcaatgctagaaagt 141
||| ||||||||||||||||||
Sbjct: 50 atg----tgggcaatgctagaaagt 30
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| ||||||| |||| |||||||||| || | |||| |||
Sbjct: 148 gtttcatattataagactttctagcattgccca--cattcatatagat--gctaatgaat 93
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||||| |||||| | || ||| || |||||||||||||||| || |||||||||||
Sbjct: 92 ctagacatatatatgtgtataggttcattaacatctatatgattg----tgggcaatgct 37
Query: 135 agaaagttttataacctgaaatggaggtagta 166
||||||| |||||| ||||| ||||| ||||
Sbjct: 36 agaaagtcttataatatgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 125/152 (82%), Gaps = 8/152 (5%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| ||||||| ||| ||| || ||||| |||||||| ||
Sbjct: 15 gtttcatattataagactttctagcattgccc--acaatc--atatagatgttaatgaac 70
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||| | | |||| |||| ||||||| |||| ||||||| ||||||||||||||||||
Sbjct: 71 ctatacacatatatatgtctagattcattagcatctat----atgaatgtgggcaatgct 126
Query: 135 agaaagttttataacctgaaatggaggtagta 166
||||||| |||||| ||||| ||||| ||||
Sbjct: 127 agaaagtcttataatatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 55 atatatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatat 114
||||||| |||||||| ||| |||||||| |||| || ||||||| ||||||||||||||
Sbjct: 112 atatatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatat 53
Query: 115 gaatg 119
|||||
Sbjct: 52 gaatg 48
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaat 118
|||||||| ||||||||||||| | |||| ||||||| ||||||||||||||||||
Sbjct: 104 atgttaatgaatctagatatatgtctatgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| || ||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaacctagatatatacatatgtctagattcattaacatctatatga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||| | ||| |||| || ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatga 51
Query: 117 at 118
||
Sbjct: 50 at 49
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||||||| || |||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatctatatga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||| | | | || |||| ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| || ||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaacctagatatatacatatgtctagattcattaacatctatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||| | ||| |||| || ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatga 112
Query: 117 at 118
||
Sbjct: 113 at 114
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| | |||| |||| ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagacacatatatatgtctagattcattaacatctatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| |||||| | || ||||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatctagacatatatatgtgtctagattcattaacatctatatga 112
Query: 117 at 118
||
Sbjct: 113 at 114
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/75 (86%), Gaps = 4/75 (5%)
Strand = Plus / Plus
Query: 67 taataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgg 126
|||| |||||||| |||||||| |||||||||| |||| ||| ||||||| ||||||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatga----atgtgg 118
Query: 127 gcaatgctagaaagt 141
|||||||||||||||
Sbjct: 119 gcaatgctagaaagt 133
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| ||| |||||||| |||| || ||||||| ||||||||||||||||
Sbjct: 53 atatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatatga 112
Query: 117 at 118
||
Sbjct: 113 at 114
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/63 (88%), Gaps = 4/63 (6%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 72 atatatatgttaatgaatctagatatatatgt----ctagattcattaacatatatatga 17
Query: 117 atg 119
|||
Sbjct: 16 atg 14
Score = 52.0 bits (26), Expect = 3e-06
Identities = 54/63 (85%), Gaps = 4/63 (6%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| |||||||| |||||| | ||||||| |||||||| |||||||
Sbjct: 19 atatatatgttaatgaatctagacatatatat----ctagattcattaacatatatatga 74
Query: 117 atg 119
|||
Sbjct: 75 atg 77
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 68/79 (86%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||| | |||| | |||| ||||||||||||||||||| |||| ||
Sbjct: 59 atgttaatgaatctaaacatatgtatatgtctagatttattaacatcta----aatgtat 114
Query: 123 gtgggcaatgctagaaagt 141
|||||||||||||||||||
Sbjct: 115 gtgggcaatgctagaaagt 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||||||||||||||| ||||| |||| |||||| ||||||||||| |||||||
Sbjct: 104 atgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
|||||||| |||||||| ||||| |||||||||||| |||| ||||||||||||||
Sbjct: 104 atgttaatgaatctagacttatatatatgcctagattcattagcatctatatgaatg 48
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/54 (90%), Gaps = 4/54 (7%)
Strand = Plus / Plus
Query: 88 tatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
|||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 60 tatgtctagatttattaacatctat----atgaatgtgggcaatgctagaaagt 109
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/74 (86%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 93 ctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataacctg 152
||||||| |||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct: 57 ctagattcattaacatctatatga----atgtgggcaatgctagaaagtcttataatatg 112
Query: 153 aaatggaggtagta 166
||| ||||| ||||
Sbjct: 113 aaacggaggaagta 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||||||| | |||||| ||||| ||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/65 (86%), Gaps = 4/65 (6%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| ||||||| ||| |||||| ||||| |||||||| |||
Sbjct: 116 gtttcatattataagactttctagcattgccc--acattc--atatagatgttaatgaat 61
Query: 75 ctaga 79
|||||
Sbjct: 60 ctaga 56
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaat 118
||||||||||||||| ||| |||| |||| ||||||| ||||||||| ||||||||
Sbjct: 104 atgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 7e-10
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 49 acattcatatatatatgttaataaatctagatatatatgtatgcctagatttattaacat 108
|||| ||||||||||||||||| |||||| | | ||| |||| |||||| ||||||||
Sbjct: 118 acatacatatatatatgttaatgaatctaaacacatacatatgtttagattcattaacat 59
Query: 109 ctatatgaatgaatgtgggcaatgctagaaagt 141
||| |||||||||||| |||||||||||||
Sbjct: 58 cta----aatgaatgtgggtaatgctagaaagt 30
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaat 118
|||||||| ||||||||||||| | ||| ||||||| ||||||||||||||||||
Sbjct: 59 atgttaatgaatctagatatatgtctatatctagattcattaacatctatatgaat 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||||||| | ||| ||||||| ||||||||| ||||||
Sbjct: 110 atatagatgttaatgaatctagatatagacatatatctagattcattaacatccatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 105/127 (82%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||| | ||| ||||| |||||||||||| |||||||||| || | ||||||||
Sbjct: 15 gtttcataatgtaagactttatagcattaccca--cattcatatagat--gctaataaat 70
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||| ||||||| ||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct: 71 ctatatatataataatgtctagattcattagcatctat----atgaatgtgggcaatgtt 126
Query: 135 agaaagt 141
|||||||
Sbjct: 127 agaaagt 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 94 tagatttattaacatctatatgaatg 119
||||||||||| ||||||||||||||
Sbjct: 73 tagatttattagcatctatatgaatg 48
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 105/127 (82%), Gaps = 8/127 (6%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||| | ||| ||||||||||||| |||| |||||||||| |||| ||| |||
Sbjct: 148 gtttcataatgtaagactttttagcattgccca--cattcatatagatatc--aatgaat 93
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||| | |||||||| || ||||||| |||||||| |||||||||| ||||||| |||
Sbjct: 92 ctaaacatatatgtgtgtctagattcattaacatatatatgaatg----tgggcaaggct 37
Query: 135 agaaagt 141
|||||||
Sbjct: 36 agaaagt 30
Score = 48.1 bits (24), Expect = 4e-05
Identities = 70/85 (82%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
|||||||||||||| |||||||| | | || |||| |||||| ||| | ||||||
Sbjct: 53 atatatatgttaatgaatctagacacacatatatgtttagattcattgatatctat---- 108
Query: 117 atgaatgtgggcaatgctagaaagt 141
||||||||||||||||||| |||||
Sbjct: 109 atgaatgtgggcaatgctaaaaagt 133
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 64 tgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||||| ||||||||||||||| ||| ||||||| ||||||| |||||||||||
Sbjct: 60 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatg 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 64 tgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||||| |||||||| || ||| ||| ||||||| ||||||| |||||||||||
Sbjct: 103 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatg 48
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaat 118
||||||||||||||| ||| |||| |||| ||||||| ||||||||| ||||||||
Sbjct: 57 atgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaat 112
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 64 tgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||||| ||||||||||||||| ||| ||||||| ||||||| |||||||||||
Sbjct: 73 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatg 18
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 64 tgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||||| |||||||| || ||| ||| ||||||| ||||||| |||||||||||
Sbjct: 30 tgttaatgaatctagacatctatatatatctagattcattaacacctatatgaatg 85
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagtaat 168
||||||||||||||||||||||||| |||||| ||||| ||||| ||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtaat 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 123 gtgggcaatgctagaaagttttataacctgaaatggaggtagtaat 168
||||||||||||||||||| |||||| ||||| ||||| ||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagtaat 106
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||||||||| ||||| ||||||| ||| |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgccc--acattcatata 57
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 7e-10
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 85 atgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagtttt 144
|||||| ||| |||| ||||||||||||||||||| ||| || ||||||||||| ||
Sbjct: 62 atgtataccttgattcattaacatctatatgaatg----tggacagtgctagaaagtctt 117
Query: 145 ataacctgaaatggaggtagtaata 169
||| ||||||| ||||| |||||||
Sbjct: 118 atagcctgaaacggaggaagtaata 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||| ||| || ||||||||||| ||||||||||||| ||||| ||||
Sbjct: 54 atgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 74/88 (84%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 79 atatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaa 138
|||||||| |||| ||||||| |||| ||||||||||| |||||||||||| |||||
Sbjct: 55 atatatatatatgtctagattcattagcatctatatga----atgtgggcaatgatagaa 110
Query: 139 agttttataacctgaaatggaggtagta 166
||| |||||| ||||| ||||| ||||
Sbjct: 111 agtcttataatatgaaacggagggagta 138
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 65/76 (85%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||||| |||| |||| ||||||| ||||||||| |||||| ||
Sbjct: 33 atgttaatgaatctagatagatatatatgtctagattcattaacatcaatatga----at 88
Query: 123 gtgggcaatgctagaa 138
||||| ||||||||||
Sbjct: 89 gtgggaaatgctagaa 104
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| ||||| || |||||| |||||||| ||| ||||||| ||||||||||||||||
Sbjct: 110 atatagatgttgatgaatctaaatatatatagatgtctagattcattaacatctatatga 51
Query: 117 atg 119
|||
Sbjct: 50 atg 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| || ||| ||| |||||| || |||||||||||||
Sbjct: 53 atatagatgttaatgaatctagacatctatatatatttagattcatcaacatctatatga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||| ||| |||||||| |||||| | || ||||||| ||||||||||||||||
Sbjct: 86 atatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctatatga 27
Query: 117 atg 119
|||
Sbjct: 26 atg 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| | |||| |||| ||||||| ||| ||||||||||||
Sbjct: 29 atatagatgttaatgaatctagacacatatatatgtctagattcatttacatctatatga 88
Query: 117 atg 119
|||
Sbjct: 89 atg 91
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/55 (89%), Gaps = 4/55 (7%)
Strand = Plus / Plus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataa 148
|||||| |||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 64 tagattcattaacatctatatga----atgtgggcaatgctagaaagtcttataa 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 118 tgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||||||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||||||||| ||||| ||||||| ||| |||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgccc--acattcatata 80
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 6/78 (7%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||| |||| ||| | ||||||| ||||||||||||||| |||
Sbjct: 102 atgttaatgaatctagacatatgtgtgt--ctagattcattaacatctatatg----aat 49
Query: 123 gtgggcaatgctagaaag 140
||||||||||||||||||
Sbjct: 48 gtgggcaatgctagaaag 31
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/47 (89%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatata 61
|||||||||||||| ||||| ||||||| ||| |||||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgccc--acattcatatata 59
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 126/154 (81%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||||||||||| ||||| || |||| |||| ||||||||||||| || ||| |||
Sbjct: 15 gtttcatattataagactttctaacattgccca--cattcatatatat--gtcaatgaat 70
Query: 75 ctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgct 134
||||| |||||| | || |||||| ||| ||||||||||||| || ||| |||| ||
Sbjct: 71 ctagacatatatatgtgtttagattcattgacatctatatgaa-ga---tggacaattct 126
Query: 135 agaaagttttataacctgaaatggaggtagtaat 168
||||||| |||||| ||||| ||||| ||||||
Sbjct: 127 agaaagtcttataatatgaaacggagggagtaat 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||||||||||||| |||||||| |||||| ||||| ||||| ||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| ||||||| || ||| ||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatga 51
Query: 117 at 118
||
Sbjct: 50 at 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 tatgcctagatttattaacatctatatgaat 118
|||| ||||||| ||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/55 (89%), Gaps = 4/55 (7%)
Strand = Plus / Plus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataa 148
|||||| |||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 64 tagattcattaacatctatatga----atgtgggcaatgctagaaagtcttataa 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 118 tgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||||||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||||||||| ||||| ||||||| ||| |||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgccc--acattcatata 80
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 79 atgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/47 (89%), Gaps = 2/47 (4%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatata 61
|||||||||||||| ||||| ||||||| ||| |||||||||||||
Sbjct: 118 gtttcatattataagactttctagcattgccc--acattcatatata 74
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||| ||||||| || ||| ||| ||||||||||||||||
Sbjct: 110 atatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatga 51
Query: 117 at 118
||
Sbjct: 50 at 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/54 (87%), Gaps = 4/54 (7%)
Strand = Plus / Plus
Query: 88 tatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
|||| ||||||| |||||||||||| ||||||||||||||| |||||||||
Sbjct: 84 tatgtctagattcattaacatctat----atgaatgtgggcaatactagaaagt 133
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/72 (87%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatatatgttaataaat 74
|||||| ||||||| ||||| |||||||||||| ||||||||||||| |||||| |||
Sbjct: 122 gtttcaaattataagactttctagcattaccca--cattcatatatat--gttaatgaat 67
Query: 75 ctagatatatat 86
||||| ||||||
Sbjct: 66 ctagacatatat 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 70/84 (83%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 83 atatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagtt 142
|||| |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatga----atgtgggtaatgctagaaagtc 108
Query: 143 ttataacctgaaatggaggtagta 166
|||||| ||||| ||||| ||||
Sbjct: 109 ttataatttgaaacggagggagta 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatat 62
|||||||||||||| ||||| ||| ||||||| ||||||||||||||
Sbjct: 15 gtttcatattataagactttctagtattaccc--acattcatatatat 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||| ||| ||||||||| |||||| ||||| ||||| ||||
Sbjct: 54 atgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/79 (84%), Gaps = 4/79 (5%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||| ||| ||| |||| ||||||| ||||||||||| |||||||
Sbjct: 104 atgttaatgaatctaaatacatacatatgtctagattcattaacatcta----aatgaat 49
Query: 123 gtgggcaatgctagaaagt 141
||||||||||||||||||
Sbjct: 48 atgggcaatgctagaaagt 30
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/79 (84%), Gaps = 4/79 (5%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||| |||||| | || |||||| ||||||||||| |||||||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatcta----aatgaat 49
Query: 123 gtgggcaatgctagaaagt 141
||||| |||||||||||||
Sbjct: 48 gtgggtaatgctagaaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctat 112
|||||||| |||||| | | |||| |||| ||||||| ||||||||||||
Sbjct: 59 atgttaatgaatctaaacacatatatatgtctagattcattaacatctat 108
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/70 (85%), Gaps = 4/70 (5%)
Strand = Plus / Minus
Query: 72 aatctagatatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaat 131
|||||||| |||||||| |||||||||| |||| ||| ||||||||| ||||||||
Sbjct: 74 aatctagacatatatgtgtgcctagattcattagcatagatatgaatg----tgggcaat 19
Query: 132 gctagaaagt 141
||||||||||
Sbjct: 18 gctagaaagt 9
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/58 (87%), Gaps = 4/58 (6%)
Strand = Plus / Plus
Query: 84 tatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
||||| || |||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 62 tatgtgtgtctagatttattaacatctat----atgaatgtggacaatgctagaaagt 115
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/74 (85%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 93 ctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataacctg 152
|||||||||||||||||||| |||||| ||| |||||||||||||| |||||| ||
Sbjct: 74 ctagatttattaacatctatgtgaatg----tggacaatgctagaaagtcttataatatg 19
Query: 153 aaatggaggtagta 166
||| ||||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||||||| |||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 88 atgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/74 (85%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 93 ctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataacctg 152
||||||||||||||||||||||| ||||||| |||||||||||||| ||| | ||
Sbjct: 74 ctagatttattaacatctatatg----aatgtggacaatgctagaaagtcttacattatg 19
Query: 153 aaatggaggtagta 166
||||||||| ||||
Sbjct: 18 aaatggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatat 82
||||| ||||||||||||||||||||
Sbjct: 53 atatagatgttaataaatctagatat 78
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 88 tatgcctagatttattaacatctatatgaatg 119
|||| |||||||||||||||||||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatg 94
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/53 (88%), Gaps = 4/53 (7%)
Strand = Plus / Minus
Query: 88 tatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaag 140
|||| ||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatg----tgggcaatgctagaaag 31
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||||||| ||||||| ||||| |||||| ||| |||||||||||| |||| ||||||
Sbjct: 43 atatatatgctaataaaactagacatatat--atgtctagatttattagcatcaatatga 100
Query: 117 atg 119
|||
Sbjct: 101 atg 103
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 71/85 (83%), Gaps = 4/85 (4%)
Strand = Plus / Minus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||| ||||||| ||| ||||||| ||||||| ||| |
Sbjct: 110 atatagatgttaatgaatctaaatatatacacatgtctagattcattaacaacta----a 55
Query: 117 atgaatgtgggcaatgctagaaagt 141
||||||||||| |||||||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagt 30
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/73 (84%), Gaps = 4/73 (5%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||||| |||| |||| ||||||| ||||||||| |||||||||
Sbjct: 104 atgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatg--- 48
Query: 123 gtgggcaatgcta 135
|||| |||||||
Sbjct: 47 -tgggtaatgcta 36
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 49 acattcatatatatatgttaataaatctagatatatatgtatgcctagatttattaacat 108
|||||||||||| || |||||| |||||||||| |||| |||| ||||||| ||||| ||
Sbjct: 116 acattcatatat-ta-gttaatgaatctagatagatatatatgtctagattcattaatat 59
Query: 109 ctatatgaatg 119
| |||||||||
Sbjct: 58 caatatgaatg 48
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||||||||| | |||| |||||| |||| |||||||||||
Sbjct: 53 atatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatga 112
Query: 117 atg 119
|||
Sbjct: 113 atg 115
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 116 aatgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||| |||||||| |||||| ||||| ||||| ||||
Sbjct: 55 aatgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccata 49
|||||||||||||| ||||| ||||||||||||||
Sbjct: 104 gtttcatattataagactttctagcattacccata 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
|||||| |||| ||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 65 atgaatatgggtaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 116 aatgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||| |||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 64 aatgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccata 49
|||||||||||||| ||||| ||||||| ||||||
Sbjct: 104 gtttcatattataagactttctagcattgcccata 70
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagttttataacctgaaatggaggtagtaa 167
||||||||||||||||||||||||| ||| | ||||||||||| |||||
Sbjct: 81 atgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagtaa 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 120 aatgtgggcaatgctagaaagt 141
||||||||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaaagt 30
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
|||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 72 tagattcattaacatctatatga----atgtgggcaatgctagaaagt 115
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 64/76 (84%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||| ||| |||| |||| ||||||| ||||||||| |||||||||
Sbjct: 78 atgttaatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatg--- 22
Query: 123 gtgggcaatgctagaa 138
|||| ||||||||||
Sbjct: 21 -tgggaaatgctagaa 7
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/57 (87%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
|||||||| |||| ||| |||||| |||| |||||| |||||||||||||||||||
Sbjct: 59 atgttaatgaatcaagacatatat--atgcatagattcattaacatctatatgaatg 113
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 75/90 (83%), Gaps = 6/90 (6%)
Strand = Plus / Plus
Query: 49 acattcatatatatatgttaataaatctagatatatatgtatgcctagatttattaacat 108
|||||||||| ||||| |||||||| ||| || |||| |||| ||||||| ||||||||
Sbjct: 47 acattcatatttatat--taataaatttagctaaatatatatgtctagattcattaacat 104
Query: 109 ctatatgaatgaatgtgggcaatgctagaa 138
| |||||| ||||||| ||||||||||
Sbjct: 105 caatatga----atgtgggaaatgctagaa 130
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/55 (87%), Gaps = 4/55 (7%)
Strand = Plus / Minus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagttttataa 148
|||||| ||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatg----tgggcaattctagaaagtcttataa 23
Score = 48.1 bits (24), Expect = 4e-05
Identities = 90/109 (82%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 13 ctgtttcatattataaaactttttagcattacccatacattcatatatatatgttaataa 72
|||||||||||||||| ||||| ||| ||| |||| |||||||||| || |||||| |
Sbjct: 13 ctgtttcatattataagactttctagaattgccca--cattcatatagat--gttaatga 68
Query: 73 atctagatata--tatgtatgcctagatttattaacatctatatgaatg 119
||||| | | | ||||| || |||||| |||||||||||||||||||
Sbjct: 69 atctatacacacatatgtgtgtatagattcattaacatctatatgaatg 117
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||||||
Sbjct: 26 atgaatgtgggcaatgctagaaagt 2
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagt 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagtttta 145
||||||||||||||||||| |||||||||
Sbjct: 93 atgaatgtgggcaatgctaaaaagtttta 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||| | ||||||||||||||||| ||| |||||||||||
Sbjct: 132 gtttcataatgtaaaactttttagcattgccc--acattcatata 90
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 83 atatgtatgcctagatttattaacatctatatgaatg 119
|||| |||| ||||||| |||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatg 89
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||||||
Sbjct: 77 atgaatgtgggcaatgctagaaagt 101
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagt 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||||||||
Sbjct: 93 atgaatgtgggcaatgctagaaagt 117
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatatatat 62
||||| |||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 15 gtttcttattataagactttctagcattaccc--acattcatatatat 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 79 atatatatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaa 138
|||||||||| || ||||||| |||||||| |||||||||| ||| |||||||||||
Sbjct: 53 atatatatgt-tgtctagattcattaacatatatatgaatg----tggacaatgctagaa 107
Query: 139 agttttataa 148
||| ||||||
Sbjct: 108 agtcttataa 117
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/67 (86%), Gaps = 4/67 (5%)
Strand = Plus / Minus
Query: 13 ctgtttcatattataaaactttttagcattacccatacattcatatatatatgttaataa 72
|||||||||||||||| ||||| ||||||| || |||||| |||||||||||||| |
Sbjct: 127 ctgtttcatattataagactttctagcattgtcc--acattc--atatatatgttaatga 72
Query: 73 atctaga 79
|||||||
Sbjct: 71 atctaga 65
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 117 atgaatgtgggcaatgctagaaagttttataa 148
||||||||||| ||||||||||||| ||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttataa 23
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 70/85 (82%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 57 atatatatgttaataaatctagatatatatgtatgcctagatttattaacatctatatga 116
||||| |||||||| |||||| | | ||| |||| ||||||| |||| |||||| |
Sbjct: 53 atataaatgttaatgaatctaaacacatacatatgtctagattcattagcatcta----a 108
Query: 117 atgaatgtgggcaatgctagaaagt 141
|||||| ||||||||||||||||||
Sbjct: 109 atgaatttgggcaatgctagaaagt 133
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/49 (87%), Gaps = 4/49 (8%)
Strand = Plus / Plus
Query: 93 ctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
||||||| |||||||||||| |||||||||| ||||||||||||||
Sbjct: 63 ctagattcattaacatctat----atgaatgtggacaatgctagaaagt 107
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 63 atgttaataaatctagatatatat 86
||||||||||||||||||||||||
Sbjct: 90 atgttaataaatctagatatatat 67
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 118 tgaatgtgggcaatgctagaaagt 141
||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagt 30
Score = 46.1 bits (23), Expect = 2e-04
Identities = 42/48 (87%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 94 tagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgc----gggcaatgctagaaagt 133
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/49 (87%), Gaps = 4/49 (8%)
Strand = Plus / Plus
Query: 93 ctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
||||||| ||||||||||||||| ||| ||||||||||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatg----tgggcaatgctagaaagt 122
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 123 gtgggcaatgctagaaagttttataacctgaaatggaggtagta 166
||||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 15 gtttcatattataaaactttttagcattacccata 49
|||||||| ||||| ||||| ||||||||||||||
Sbjct: 130 gtttcataatataagactttctagcattacccata 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 93 ctagatttattaacatctatatgaat 118
||||||| ||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/76 (82%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||||| |||| ||| ||||||| ||||| ||| |||||| ||
Sbjct: 59 atgttaatgaatctagataaatatatatatctagattcattaatatcaatatga----at 114
Query: 123 gtgggcaatgctagaa 138
||||| ||||||||||
Sbjct: 115 gtgggaaatgctagaa 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 66 ttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatg 119
||||| ||||||||||||||| | | ||||||| |||||||| |||||||||
Sbjct: 101 ttaatgaatctagatatatatatttatctagattcattaacattaatatgaatg 48
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/76 (82%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 63 atgttaataaatctagatatatatgtatgcctagatttattaacatctatatgaatgaat 122
|||||||| |||||||||| |||| |||| ||||||| ||||| ||| |||||| ||
Sbjct: 59 atgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga----at 114
Query: 123 gtgggcaatgctagaa 138
||||| ||| ||||||
Sbjct: 115 gtgggaaatactagaa 130
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 121 atgtgggcaatgctagaaagttttata 147
||||||||||||||||||||| |||||
Sbjct: 50 atgtgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 atgaatgtgggcaatgctagaaa 139
|||||||||||||||||||||||
Sbjct: 71 atgaatgtgggcaatgctagaaa 93
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/44 (88%), Gaps = 4/44 (9%)
Strand = Plus / Minus
Query: 95 agatttattaacatctatatgaatgaatgtgggcaatgctagaa 138
||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 72 agattcattaacatctatatgaatg----tgggcaatgctagaa 33
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 120 aatgtgggcaatgctagaaagt 141
||||||||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaaagt 30
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 116 aatgaatgtgggcaatgctagaaagt 141
|||||||||||||||||||| |||||
Sbjct: 55 aatgaatgtgggcaatgctaaaaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 tagatttattaacatctatatgaatg 119
|||||||||||||||||| |||||||
Sbjct: 56 tagatttattaacatctaaatgaatg 81
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/59 (84%), Gaps = 4/59 (6%)
Strand = Plus / Minus
Query: 83 atatgtatgcctagatttattaacatctatatgaatgaatgtgggcaatgctagaaagt 141
|||| |||| ||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 84 atatatatgtctagattcattaacatcta----aatgaatgtggataatgctagaaagt 30
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 94 tagatttattaacatctatatgaatg 119
|||||| |||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 15 gtttcatattataaaactttttagcattacccatacattcatata 59
|||||||||||||| ||||| |||||||| || |||||||||||
Sbjct: 15 gtttcatattataagactttatagcattatcc--acattcatata 57
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 93 ctagatttattaacatctatatgaat 118
||||||||||||||||| ||||||||
Sbjct: 67 ctagatttattaacatcaatatgaat 92
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 118 tgaatgtgggcaatgctagaaagttttata 147
|||| ||||||||||||||||||| |||||
Sbjct: 110 tgaacgtgggcaatgctagaaagtcttata 139
