miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00908;MIR529;AY946857.1/130-2 4530:Oryza sativa (rice)
Length = 129
Score = 79.8 bits (40), Expect = 7e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 68 aaggctgtaccctctctcttcttctcttagcttcttgatg 107
||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaggctgtaccctctctcttcttctcttagcttcttgatg 128
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 10 taaagggagaagagagagagtacagcctta 39
|||||| |||||||||||||||||||||||
Sbjct: 9 taaaggaagaagagagagagtacagcctta 38
>RF00908;MIR529;AP008210.1/15896512-15896646 39947:Oryza sativa
Japonica Group
Length = 135
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 67 caaggctgtaccctctctcttcttctcttagctt 100
||||||||||| ||| ||||||||||||||||||
Sbjct: 96 caaggctgtacgctccctcttcttctcttagctt 129
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 aaggttaaagggagaagagagagagtacagc 35
|||| |||| |||||||||||||||||||||
Sbjct: 6 aaggctaaatggagaagagagagagtacagc 36
