miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 125 bits (63), Expect = 1e-28
Identities = 95/105 (90%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||
Sbjct: 105 tctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctaga 46
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
|| ||||||| | |||||||||||| |||||||||||||||||||
Sbjct: 45 ttcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
Score = 89.7 bits (45), Expect = 7e-18
Identities = 92/106 (86%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt----ctag 68
||||||||| ||||||| ||||| |||||||||||||||| |||| ||||| ||||
Sbjct: 10 tctagcattgtccacattcatatatatgttaatgaatctag-acatgtatgtgtgcctag 68
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 125 bits (63), Expect = 1e-28
Identities = 95/105 (90%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||||||||||||||||||||| || |||||| ||||||
Sbjct: 105 tctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctaga 46
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
|| ||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 45 ttcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
Score = 99.6 bits (50), Expect = 8e-21
Identities = 93/105 (88%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc-acatatatgt--ctaga 69
||||||||| |||||||| ||||| |||||||||||||||| | |||||||| |||||
Sbjct: 10 tctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctaga 69
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
|| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 2e-27
Identities = 96/107 (89%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| ||||| |||||||||||||| | || |||||||||||||
Sbjct: 129 tctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 69 tttattaacatatatatgaatgtgggcaatgccagaaagtcttataa 23
Score = 95.6 bits (48), Expect = 1e-19
Identities = 91/103 (88%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 17 gcattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctagattta 73
||||| |||||||| ||||| |||||||| ||||||| || |||||||| | ||||| |
Sbjct: 38 gcattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattca 97
Query: 74 ttaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 98 ttaacatatatatgaatgtgggcaatgctagaaagtcttataa 140
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 91/102 (89%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatt 71
||||||| | |||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 36 tagcattcctcacattcatatagatgttaatgaatctagacacacatatatttctagatt 95
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| |||||||||||||||||||||||||||||||
Sbjct: 96 cattaacatctatatgaatgtgggcaatgctagaaagtctta 137
Score = 79.8 bits (40), Expect = 7e-15
Identities = 90/105 (85%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
||||||||| |||||||| |||||||||||||||||||||| | ||||| |||||||
Sbjct: 129 tctagcattgcccacattcatatagatgttaatgaatctag-aaatatatgtgtgtctag 71
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| ||||||||||| | ||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtctta 26
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 91/102 (89%), Gaps = 3/102 (2%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatt 71
||||||| | |||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 127 tagcattgctcacattcatatagatgttaatgaatctagacacacatatatttctagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| |||||||||||||||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Score = 87.7 bits (44), Expect = 3e-17
Identities = 91/105 (86%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
||||||||| |||||||| |||||||||||||||||||||| | ||||| |||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaatctag-aaatatatgtgtgtctag 92
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtctta 137
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 107 bits (54), Expect = 3e-23
Identities = 94/105 (89%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatat--atgtctaga 69
||||||||| |||||||| |||||||||||||||||||||| || |||| ||| |||||
Sbjct: 105 tctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctaga 46
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
|| ||||||| | |||||||| |||||||||||||||||||||||
Sbjct: 45 ttcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
Score = 101 bits (51), Expect = 2e-21
Identities = 92/105 (87%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||||||| |||| ||| ||||| |||||||||||||||| ||||||||| |||||
Sbjct: 10 tctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctaga 69
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttat 114
|| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 105 bits (53), Expect = 1e-22
Identities = 86/96 (89%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacat--atatgtctagat 70
||||||||| |||||||| |||| |||||||||||||||||||||| |||||| |||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctagcacatacatatgtttagat 93
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaa 106
| ||||||| |||||||||||||| ||||||||||
Sbjct: 94 tcattaacatcaatatgaatgtgggaaatgctagaa 129
Score = 79.8 bits (40), Expect = 7e-15
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatct-agcacatatatgt-ctagat 70
||||||||| |||||||| |||| ||||||||||||||| | || || ||||| ||||||
Sbjct: 128 tctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtgctagat 69
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaa 106
| ||||||| |||||||||||||| ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 105 bits (53), Expect = 1e-22
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-----cacatatatgtcta 67
||||||||| |||||||| ||||||||||||||||||||| ||||||||| | ||
Sbjct: 131 tctagcattgcccacattcatatagatgttaatgaatctatacacacacatatatatata 72
Query: 68 gatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 23
Score = 85.7 bits (43), Expect = 1e-16
Identities = 94/110 (85%), Gaps = 7/110 (6%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtct------ 66
||||||||| |||||||| ||||||||||||||||||||| | |||||||| |
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaatctat-atatatatgtgtgtgtat 92
Query: 67 agatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 93 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 142
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 101 bits (51), Expect = 2e-21
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 14 ctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattta 73
|||||||| |||||||| ||||| |||||||||||||||| | ||||||||||||||| |
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctag-atatatatgtctagattca 32
Query: 74 ttaacacaaatatgaatgtgggcaatg 100
|||||| | ||||||||||||||||||
Sbjct: 31 ttaacatatatatgaatgtgggcaatg 5
Score = 101 bits (51), Expect = 2e-21
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatatatgtctagatttattaa 77
|||| |||||||| ||||| |||||||||||||||| |||||||| |||||||| |||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctag-acatatatatctagattcattaa 63
Query: 78 cacaaatatgaatgtgggcaatgctag 104
|| | ||||||||||||||||||||||
Sbjct: 64 catatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 97.6 bits (49), Expect = 3e-20
Identities = 93/107 (86%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||| | ||||||||||||||||| ||| || |||||||||||||
Sbjct: 34 tctagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|| |||| || ||||||||||||||||||||||||||||||||||
Sbjct: 94 ttcattagcatctatatgaatgtgggcaatgctagaaagtcttataa 140
Score = 87.7 bits (44), Expect = 3e-17
Identities = 93/107 (86%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctaga-- 69
||||||||| |||||||| ||||||||| |||||||||||| || |||||||| || |
Sbjct: 129 tctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatagg 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|| ||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataa 23
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 97.6 bits (49), Expect = 3e-20
Identities = 96/108 (88%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaa-tgaatctag-cacata--tatgtctag 68
|||||||||||||||||| ||||||||||||| | ||||||| ||| || ||| |||||
Sbjct: 34 tctagcattacccacattcatatagatgttaaattaatctagacacctacatatatctag 93
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 141
Score = 81.8 bits (41), Expect = 2e-15
Identities = 94/108 (87%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctaga 69
||||||||| |||||||| |||||||||||||||||||||| | || || ||||||||
Sbjct: 130 tctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctaga 71
Query: 70 ttta-ttaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|| | |||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 70 ttaatttaacatctatatgaatgtgggtaatgctagaaagtcttataa 23
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 92/105 (87%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt----ctag 68
|||||| || ||||||||||||||||| |||||||||||| |||||||||| ||||
Sbjct: 34 tctagcgttgcccacatttatatagatactaatgaatctag-acatatatgtgtgcctag 92
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| |||| || | |||||||||||||||||||||||||||||||
Sbjct: 93 attcattagcatatatatgaatgtgggcaatgctagaaagtctta 137
Score = 83.8 bits (42), Expect = 5e-16
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| ||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 129 tctagcattgcccacattcatatatatgctaatgaatctaggcacacatatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| |||| | |||| ||||||||||| ||||||||||||||
Sbjct: 69 ttcattagtatctatataaatgtgggcaacgctagaaagtctta 26
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatctag---cacatatatgtctagatttattaacac 80
||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 81 aaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||| | ||||||||||||||||||
Sbjct: 58 ctatatgaatgtagacaatgctagaaagtctta 26
Score = 63.9 bits (32), Expect = 4e-10
Identities = 88/105 (83%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
||||||||| | ||||| |||||||||||||||||||||| ||||||| ||| |||
Sbjct: 34 tctagcattgtctacattcatatagatgttaatgaatctag-acatatatgtgtgtttag 92
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| |||||||||||| ||| |||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaaacctagaaagtctta 137
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatt 71
||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaatctagacacacatatgtctagatt 93
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| | |||||| | ||||||||| |||||||||
Sbjct: 94 cattaacatctagatgaatataagcaatgctacaaagtctta 135
Score = 79.8 bits (40), Expect = 7e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 35 tagatgttaatgaatctag-cacatatatgtctagatttattaacacaaatatgaatgtg 93
||||||||||||||||||| || || | |||||||||| ||||||| |||||||||||
Sbjct: 105 tagatgttaatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtg 46
Query: 94 ggcaatgctagaaagtctta 113
||||||||||||||| ||||
Sbjct: 45 ggcaatgctagaaagactta 26
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 90/104 (86%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| | || ||| |||||||||||||||||||||| || |||||||||||||
Sbjct: 129 tctagcattgctcatattcatatagatgttaatgaatctagacacatatatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatactagaaagactta 26
Score = 89.7 bits (45), Expect = 7e-18
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctaga 69
||||| ||| |||||||| |||||||||||||||||||||| || ||||| ||||||||
Sbjct: 34 tctagtattgcccacattcatatagatgttaatgaatctagacatatatatgtgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgagcaatgctagaaagtctta 137
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 2e-18
Identities = 90/104 (86%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
|||||||| ||||||||| |||||||||||||||||||||| || |||||||||||||
Sbjct: 10 tctagcatcacccacattcatatagatgttaatgaatctagacacatatatatgtctaga 69
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||| ||| ||||||||||| | ||||||||||||||||
Sbjct: 70 ttcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
Score = 81.8 bits (41), Expect = 2e-15
Identities = 90/104 (86%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctaga 69
|||||||| || |||||| |||||||||| ||||||||||| || |||||||| |||||
Sbjct: 105 tctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgtgtctaga 46
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| ||||||||||||| ||||||||||||||||
Sbjct: 45 ttcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 89/103 (86%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 14 ctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagat 70
|||||||| | |||||| |||||||||||||||||||||| ||||||||| |||||||
Sbjct: 35 ctagcattgctcacattcatatagatgttaatgaatctagacacacatatatatctagat 94
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
| ||||||| || ||||||||||||||| || |||||||||
Sbjct: 95 tcattaacatctatgtgaatgtgggcaatgttaaaaagtctta 137
Score = 69.9 bits (35), Expect = 7e-12
Identities = 85/100 (85%), Gaps = 5/100 (5%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatata----tgtctagattta 73
|||| |||||||| | |||||||||||||||||||| | ||||| |||||||||| |
Sbjct: 124 cattgcccacattcacatagatgttaatgaatctag-atatatatgtgtgtctagattca 66
Query: 74 ttaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| ||||||||||| |||||||||| ||||||||
Sbjct: 65 ttaacatctatatgaatgtgagcaatgctaggaagtctta 26
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 87.7 bits (44), Expect = 3e-17
Identities = 91/105 (86%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt----ctag 68
|||| |||| |||||||| ||||||||| ||||||||||| |||||||||| ||||
Sbjct: 108 tctaacattgcccacattcatatagatgcaaatgaatctag-acatatatgtgtgcctag 50
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| |||| || | |||||||||||||||||||||||||||||||
Sbjct: 49 attcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| ||| |||||||||||| ||||||||||||||||
Sbjct: 13 tctagcattgcccacattcatatctatgctaatgaatctaggcacacatatatgtctaga 72
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||| || |||||||||||||||||| ||||||||||||
Sbjct: 73 ttcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 82/94 (87%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 23 cccacatttatatagatgttaatgaatctag---cacatatatgtctagatttattaaca 79
|||| ||| |||||||||||||||||| ||| | |||||||||||||||| |||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 80 caaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||||||||| |||||||||||||
Sbjct: 104 tctatatgaatgtgggcaatactagaaagtctta 137
Score = 71.9 bits (36), Expect = 2e-12
Identities = 89/105 (84%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
||||| ||| |||||||| |||||||||||||||||||||| ||||||| ||||||
Sbjct: 129 tctagtattgcccacattcatatagatgttaatgaatctag-acatatatgcgtgtctaa 71
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| |||||||| |||||| | |||||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 87.7 bits (44), Expect = 3e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||
Sbjct: 55 atatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataa 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
|||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 103 tctagcattacccacattcatatatatgttaatgaatctag-acatatat 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||| ||| ||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatactagaaagtcttataa 23
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 87.7 bits (44), Expect = 3e-17
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc-acatatatgtctagatt 71
||||| ||| |||||||| ||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 127 tctaggattgcccacattcttatagatactaatgaatctagccacatatatgtccagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 67 cattaacatctatatgaatgtgggcaatgctagaatgacttata 24
Score = 67.9 bits (34), Expect = 3e-11
Identities = 89/105 (84%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt--ctagat 70
||||||||| |||||||| |||||||||||||||||||| | |||||||||| ||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaatct-ggacatatatgtggctagat 92
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
| |||| | ||| ||||||||||||| |||||| | ||||||
Sbjct: 93 tcattagtatctataagaatgtgggcaatcctagaatgacttata 137
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
|||||||||||||| ||| |||||||||||||||||||||| ||||| ||| |||| |
Sbjct: 129 tctagcattacccatattcatatagatgttaatgaatctagacacacatctatatctaaa 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| ||||| ||||||||||||||||||
Sbjct: 69 ttcattaacatctatatgtatgtgggcaatgctagaa 33
Score = 54.0 bits (27), Expect = 4e-07
Identities = 80/97 (82%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| ||||||| |||||||||||||||||| ||| | || | ||||||||
Sbjct: 34 tctagcattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||| |||| ||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggtaatgctagaa 130
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| | |||||| |||| ||||||||||||||||| | |||||||||||||
Sbjct: 8 tctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtctaga 67
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||||| ||||||||||
Sbjct: 68 ttcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctaga 69
||||||||| |||||||| |||| ||||||||||||||||| || ||||| | ||||||
Sbjct: 103 tctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctaga 44
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||| | ||||||||||
Sbjct: 43 ttcattaacatcaatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
|||||||||||||| ||| |||| ||||||||||||||||| | |||||||||||||
Sbjct: 34 tctagcattacccatattcatatggatgttaatgaatctagttggatatatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||| | ||||||||||
Sbjct: 94 ttcattaacattaatatgaatgtgagaaatgctagaa 130
Score = 50.1 bits (25), Expect = 6e-06
Identities = 81/98 (82%), Gaps = 5/98 (5%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt----ctag 68
||||||||| | |||||| |||| |||||||||||||||| |||||||| | ||||
Sbjct: 129 tctagcatttctcacattcatattaatgttaatgaatctag-acatatatatccaactag 71
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaa 106
||| ||||||| |||||||| |||| ||||||||||
Sbjct: 70 attcattaacatccatatgaatatgggtaatgctagaa 33
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 85.7 bits (43), Expect = 1e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 105 tctagcattgcccacattcatatagatgttaataaatctag 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
||||||||||| ||||||||||||||||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtctta 26
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatt 71
||||||||| |||||||| |||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 127 tctagcatttcccacattcatattgatgttaatgaatctagacatatatatgtctacatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
||||||| ||||||||||| | ||||||||||
Sbjct: 67 cattaacatcaatatgaatgtagaaaatgctagaa 33
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatt 71
||||||||| | ||||| |||| ||||||||||||| ||| || |||||||||||||||
Sbjct: 34 tctagcattttctacattcatattgatgttaatgaatgtagacatatatatgtctagatt 93
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 94 cattaacatcaatatgaatgtgggaaatgctagaa 128
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 1e-16
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||||||| |||||||| |||| |||||||||||||||| | |||||||||||||
Sbjct: 103 tctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctaga 44
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||||| ||||||||||
Sbjct: 43 ttcattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 81.8 bits (41), Expect = 2e-15
Identities = 85/98 (86%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtc----tag 68
||||||||| |||||||| |||| ||||||||||||||||| |||||||| || |||
Sbjct: 8 tctagcatttcccacattcatattgatgttaatgaatctag-acatatatatctatttag 66
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaa 106
||| ||||||| |||||||||||||| ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 32 atatagatgttaatgaatctag---cacatatatgtctagatttattaacacaaatatga 88
|||||||||| |||||||||| || ||||||||||||||| ||| ||| | ||||||
Sbjct: 110 atatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatatatga 51
Query: 89 atgtgggcaatgctagaaagtcttataa 116
|||||||||||| |||||||||||||||
Sbjct: 50 atgtgggcaatgttagaaagtcttataa 23
Score = 48.1 bits (24), Expect = 3e-05
Identities = 88/107 (82%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtct--aga 69
|||| |||| |||||||| ||||| |||| ||||||||||| || |||||||| | |||
Sbjct: 34 tctaacattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|| ||| ||| ||||||| ||| |||| ||||||||||||||||
Sbjct: 94 ttcattgacatctatatgaagatggacaattctagaaagtcttataa 140
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 88/102 (86%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatt 71
||||||||| ||||||| ||||| |||||||||||||||| ||| |||| |||||||
Sbjct: 127 tctagcattgtccacattcatataaatgttaatgaatctagacacgcatatacctagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatataggcaatgctagaaagtctta 26
Score = 67.9 bits (34), Expect = 3e-11
Identities = 86/102 (84%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc-acatatatgtctagatt 71
||||||||| || | ||| |||| ||||||||||||||||| | || ||||||||||
Sbjct: 34 tctagcattgcctatattcatattgatgttaatgaatctaggtatatgcgtgtctagatt 93
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 94 cattaacatttatatgaatgtggacaatgctagaaagtctta 135
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 89/103 (86%), Gaps = 5/103 (4%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagcacatatatgt----ctagat 70
||||||| |||||||| |||||||| | |||||||||| |||||||||| ||||||
Sbjct: 127 tagcattgcccacattcatatagatatcaatgaatctaa-acatatatgtgtgtctagat 69
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
| ||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 68 tcattaacatatatatgaatgtgggcaaggctagaaagtctta 26
Score = 83.8 bits (42), Expect = 5e-16
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
|||||| || |||||||| ||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 34 tctagccttgcccacattcatatatatgttaatgaatctagacacacatatatgtttaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||| | | ||||||||||||||||||||| |||||||||
Sbjct: 94 ttcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 90/104 (86%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtcta--ga 69
||||||||| |||||||| | ||||||| |||||||||||| |||||||| || || ||
Sbjct: 34 tctagcattgcccacattcacatagatgctaatgaatctagacacatataagtatataga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| ||||||||| |||||||||||||||||||||
Sbjct: 94 ttcattaacatctatatgaatgcgggcaatgctagaaagtctta 137
Score = 75.8 bits (38), Expect = 1e-13
Identities = 88/104 (84%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| ||| |||| ||||||||||||||||||||| | |||| ||||||||
Sbjct: 129 tctagcattgcccgcattcatatagatgttaatgaatctatatacttatatgtgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| |||| || || ||||||||||||||||||||||||||||
Sbjct: 69 ttcattagcatctatgtgaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 88/103 (85%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| |||||||| |||| |||| |||||||||||| |||||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgctaatgaatctag---atatatgtctagattc 90
Query: 73 attaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||| || ||||||||||| || |||||||||| | ||||||
Sbjct: 91 attagcatcaatatgaatgtaggaaatgctagaatgacttata 133
Score = 69.9 bits (35), Expect = 7e-12
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| || ||||| |||| |||| |||||||||||| |||||||| |||||||
Sbjct: 123 tctagcatttcctacattcatattgatgctaatgaatctag-acatatat--ctagattc 67
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
|||| || |||||||||||||| ||||||||||
Sbjct: 66 attagcatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 81/92 (88%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctagatt 71
|||||||||||||||| |||| ||||||||||||||||| || ||||| | ||||||||
Sbjct: 36 tagcattacccacattcatattgatgttaatgaatctagacatatatatctatctagatt 95
Query: 72 tattaacacaaatatgaatgtgggcaatgcta 103
||||||| |||||||||||||| |||||||
Sbjct: 96 cattaacattaatatgaatgtgggaaatgcta 127
Score = 75.8 bits (38), Expect = 1e-13
Identities = 79/92 (85%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatt 71
||||||| |||||||| |||| |||||||||||||||| | |||||||||||||||
Sbjct: 127 tagcatttcccacattcatattaatgttaatgaatctagatagatatatatgtctagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgcta 103
||||||| |||||||||||||| |||||||
Sbjct: 67 cattaacatcaatatgaatgtgggtaatgcta 36
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataa 23
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| ||||| | ||||||||||||||
Sbjct: 34 tctagcattgcccacattcatatatacgttaatgaatctag 74
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 23 cccacatttatatagatgttaatgaatctag---cacatatatgtctagatttattaaca 79
|||| ||| |||||||||||||||||| ||| | |||||||||||||||| |||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 80 caaatatgaatgtgggcaatgctagaaagtctta 113
|||||||| |||||||| |||||||||||||
Sbjct: 104 tctatatgaatatgggcaatactagaaagtctta 137
Score = 63.9 bits (32), Expect = 4e-10
Identities = 88/105 (83%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
||||| ||| |||| ||| |||||||||||||||||||||| ||||||| ||||||
Sbjct: 129 tctagtattgcccatattcatatagatgttaatgaatctag-acatatatgcgtgtctaa 71
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| |||||||| |||||| | |||||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataa 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| ||||| | ||||||||||||||
Sbjct: 99 tctagcattgcccacattcatatatacgttaatgaatctag 59
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 97 tctagcattgcccacattcatatagatgttaatgaatctag 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 85 atgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||| ||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataa 23
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
|||||||||||| ||||| |||||||||||||||||||||| ||||| ||| |||| |
Sbjct: 34 tctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatctaaa 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||| ||||||||||||||||||
Sbjct: 94 ttcattaacatctatatatatgtgggcaatgctagaa 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 81/97 (83%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| ||||||| ||||||||||||||||||| ||| | || | ||||||||
Sbjct: 129 tctagcattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||| || ||||||||||
Sbjct: 69 ttcattaacatctatatgaatgttggtaatgctagaa 33
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 77.8 bits (39), Expect = 3e-14
Identities = 80/94 (85%), Gaps = 6/94 (6%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| |||||||| |||| ||||||||||||||||| | ||||||||||
Sbjct: 120 tctagcatttcccacattcatattgatgttaatgaatctagaa------tgtctagattc 67
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 66 attaacatcaatatgaatgtgggaaatgctagaa 33
Score = 75.8 bits (38), Expect = 1e-13
Identities = 81/94 (86%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| |||||||| |||| ||||||||||||||||| |||| ||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctag-acat-----tctagattc 87
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 88 attaacatcaatatgaatgtgggaaatgctagaa 121
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||||||| ||||||| | |||||||||||| |||||||||||||||||||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataa 117
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgggtaatgctagaaagtcttataa 23
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 106 tctagcattgtccacattcatatatatgttaatgaatctag 66
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgtt 42
|||||||||||||||||| ||||| |||||
Sbjct: 34 tctagcattacccacattcatatatatgtt 63
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 81/93 (87%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 17 gcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctagattta 73
||||| ||||||||||||| ||||||||||||||||| || ||||| | |||||||| |
Sbjct: 38 gcatttcccacatttatattgatgttaatgaatctagacatatatatctatctagattca 97
Query: 74 ttaacacaaatatgaatgtgggcaatgctagaa 106
|||| | |||||||||||||| ||||||||||
Sbjct: 98 ttaatatcaatatgaatgtgggaaatgctagaa 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| ||| ||||||||||||| | |||||||||||||
Sbjct: 129 tctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgc 101
|| ||||||| ||||| |||||||| |||||
Sbjct: 69 ttcattaacatcaatataaatgtgggaaatgc 38
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatat--gtctaga 69
||||||||| ||||||| ||||||||| |||||||||||| || |||||| |||||||
Sbjct: 34 tctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| ||||||||||||| ||||||||||
Sbjct: 94 ttcattaacatcaatatgaatgtggaaaatgctagaa 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 81/97 (83%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| ||||||| |||| ||||||||||||||||| | ||||||| |||||
Sbjct: 129 tctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||| || |||||||||||| |||||||||||
Sbjct: 69 ttcattagcatctatatgaatgtggacaatgctagaa 33
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 85/99 (85%), Gaps = 5/99 (5%)
Strand = Plus / Minus
Query: 23 cccacatttatatagatgttaatgaatctag---cacatatatgtcta--gatttattaa 77
|||||||| ||||||||||||||||||||| ||||||| ||| || |||| |||||
Sbjct: 121 cccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaa 62
Query: 78 cacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|| ||||||||||||||||| ||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaattctagaaagtcttataa 23
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 34 tctagaattgcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacata--tatgtctaga 69
||||||||| ||||||| ||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 34 tctagcattgcccacatacatataaatgttaatgaatctaaacacatacatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| |||| || | |||||| ||||||||||||||||||||||
Sbjct: 94 ttcattagcatctaaatgaatttgggcaatgctagaaagtctta 137
Score = 65.9 bits (33), Expect = 1e-10
Identities = 88/104 (84%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-caca--tatatgtctaga 69
||||||||| |||| ||| || |||||| |||||||||||| || | ||| ||| ||||
Sbjct: 129 tctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatgtgtttaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 69 ttcattaacatttatatgtatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 83/96 (86%), Gaps = 3/96 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata--tgtctagat 70
||||||||| ||||| ||||||| ||||||||||||||| | |||||| | |||||||
Sbjct: 127 tctagcatttcccacgtttatattgatgttaatgaatctgg-acatatgcctatctagat 69
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaa 106
| ||||||| |||||||||||||| ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 63.9 bits (32), Expect = 4e-10
Identities = 87/104 (83%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatt 71
||||||||| |||||||| |||| ||||||||||||||||| | ||||||| |||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctagataggcatatgtccagatt 93
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
||||||| ||||| || ||||| |||||||||| | ||||||
Sbjct: 94 cattaacatcaatataaacgtgggaaatgctagaatgacttata 137
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||| |||| || |||||||||||||||||| |||||||||||||||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||| ||||| ||||||||||
Sbjct: 56 atatgaatgtgggcaatactagatagtcttataa 23
Score = 52.0 bits (26), Expect = 2e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
|||| |||| |||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 109 tctatcattgcccacattcatatagatgctaatgaatctag-acatatat 61
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 82/95 (86%), Gaps = 3/95 (3%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatctag-caca--tatatgtctagatttattaacac 80
||||||| |||||||||||||||||||||| || | ||||| ||||| || |||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 59
Query: 81 aaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| |||||||| |||||||||||||||
Sbjct: 58 ctatatgaatatgggcaatactagaaagtcttata 24
Score = 60.0 bits (30), Expect = 7e-09
Identities = 86/104 (82%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||| ||| |||| ||| ||||||||||||||||| |||| | | |||||||||||
Sbjct: 34 tctagtattgcccatattcatatagatgttaatgaacctagatatatacatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| |||||||||||| |||| ||| |||||||||
Sbjct: 94 ttcattaacatctatatgaatgtggacaatcctaaaaagtctta 137
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 58 tatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagactta 26
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 25 cacatttatatagatgttaatgaatcta-gcacatatatgtctagatttattaacacaaa 83
|||||| ||||||||||||||||||||| ||| |||||||||| |||| ||||||| |
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatgtcttgattcattaacatcta 56
Query: 84 tatgaatgtgggcaatgcta 103
||||||||||| |||||||
Sbjct: 55 catgaatgtgggaaatgcta 36
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagattta 73
||||||| |||||||| || |||||||||||||||| || || ||||||| |||||| |
Sbjct: 36 tagcatttcccacattcatgtagatgttaatgaatcaagacatatatatgcatagattca 95
Query: 74 ttaacacaaatatgaatgtg 93
|||||| |||||||||||
Sbjct: 96 ttaacatctatatgaatgtg 115
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 119
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 111 tctagcattgtccacattcatatagatgttaataaatctag 71
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 82/95 (86%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 24 ccacatttatatagatgttaatgaatctag-caca--tatatgtctagatttattaacac 80
||||||| |||||||||||||||||||||| || | ||||| ||||| || |||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 104
Query: 81 aaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| |||||||| |||||||||||||||
Sbjct: 105 ctatatgaatatgggcaatactagaaagtcttata 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 86/104 (82%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||| ||| |||| ||| ||||||||||||||||| |||| | | |||||||||||
Sbjct: 129 tctagtattgcccatattcatatagatgttaatgaacctagatatatacatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| |||||||||||| |||| ||| |||||||||
Sbjct: 69 ttcattaacatctatatgaatgtggacaatcctaaaaagtctta 26
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 71.9 bits (36), Expect = 2e-12
Identities = 79/94 (84%), Gaps = 7/94 (7%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| |||||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 119 tctagcatttcccacattcatattgatgttaatgaat-------atatatgtctagattc 67
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| ||||| |||||||| ||||||||||
Sbjct: 66 attaacattaatataaatgtgggaaatgctagaa 33
Score = 69.9 bits (35), Expect = 7e-12
Identities = 80/94 (85%), Gaps = 7/94 (7%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| ||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 34 tctagcatttcccacatttatattaatgttaatgaatctag-acatatat------attc 86
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 87 attaacatcaatatgaatgtgggaaatgctagaa 120
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 74/86 (86%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| ||||||||||||||||| | ||||||||||| |
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtctaca 93
Query: 70 tttattaacacaaatatgaatgtggg 95
|| ||||||| ||||||||||||||
Sbjct: 94 ttcattaacatcaatatgaatgtggg 119
Score = 63.9 bits (32), Expect = 4e-10
Identities = 75/87 (86%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 23 cccacatttatatagatgttaatgaatctag-cacatatatgt--ctagatttattaaca 79
|||||||| |||| ||||||||||||| ||| || |||||| | ||||||| |||||||
Sbjct: 119 cccacattcatattgatgttaatgaatgtagacatatatatctatctagattcattaaca 60
Query: 80 caaatatgaatgtgggcaatgctagaa 106
|||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta---gcacatatatgtctaga 69
|||||||||||||||||| || |||||||||||||||||| || |||||||||||||
Sbjct: 34 tctagcattacccacattcatttagatgttaatgaatctaaacacatatatatgtctaga 93
Query: 70 tttattaaca 79
|| |||||||
Sbjct: 94 ttcattaaca 103
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 34 atagatgttaatgaatctag-cacatatatgtct--agatttattaacacaaatatgaat 90
|||||||||||||||||||| || |||||||| | ||||| ||||||| | ||||||
Sbjct: 108 atagatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaat 49
Query: 91 gtgggcaatgctagaaagtctt 112
||||| ||||||||||||||||
Sbjct: 48 gtgggtaatgctagaaagtctt 27
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 58 tatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 82 tatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 77/90 (85%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatt 71
||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 127 tagcatttcccacatttatattgatgttaatgaatctagatagaaatatatgtctagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgc 101
|| |||| ||||| |||||||| |||||
Sbjct: 67 cataaacatcaatataaatgtgggaaatgc 38
Score = 60.0 bits (30), Expect = 7e-09
Identities = 77/91 (84%), Gaps = 5/91 (5%)
Strand = Plus / Plus
Query: 17 gcattacccacatttatatagatgttaatgaatctagcacatata----tgtctagattt 72
||||| ||||||||||||| |||||| |||||||||| ||||||| | ||||||||
Sbjct: 38 gcatttcccacatttatattgatgtttatgaatctag-acatatatttctatctagattc 96
Query: 73 attaacacaaatatgaatgtgggcaatgcta 103
||||||| ||||| |||||||| |||||||
Sbjct: 97 attaacatcaatataaatgtgggaaatgcta 127
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 76 aacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||| || |||||||||||||||||||||||||||||||
Sbjct: 63 aacacacatgtgaatgtgggcaatgctagaaagtcttataa 23
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 103 tctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctaga 69
||||||||| |||||||| |||| ||||||||||||||||| || |||||| | ||| |
Sbjct: 129 tctagcatttcccacattcatattgatgttaatgaatctagacatatatatttagctaaa 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgcta 103
|||||||| | |||||||||||||| |||||||
Sbjct: 69 tttattaatataaatatgaatgtggaaaatgcta 36
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 81 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 103 tctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 86 tgaatgtgggcaatgctagaaagtcttataa 116
|||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataa 23
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
|||||||||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 77 tgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataa 23
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
|||||||||||| |||||||||||||||||||||
Sbjct: 86 atatgaatgtggacaatgctagaaagtcttataa 119
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
|||| |||| |||||||| |||||| ||||||||||||||| | ||| |||||||||
Sbjct: 34 tctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||||||| |||||||||||| ||||||||||
Sbjct: 94 ttcattaacacctatatgaatgtggaaaatgctagaa 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cac--atatatgtctaga 69
||||||||| ||||||| |||||| ||||||||||||||| || |||||| ||||||
Sbjct: 129 tctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||||||| ||||||||||||| |||| |||||
Sbjct: 69 ttcattaacacctatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| ||||||||||||||||| | |||||||| ||||
Sbjct: 129 tctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtataga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| ||||||||| ||| ||||||||||
Sbjct: 69 ttcattaacatcaatatgaatatggaaaatgctagaa 33
Score = 60.0 bits (30), Expect = 7e-09
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctaga 69
||||||||| ||| ||| |||| |||||||||||||||| || |||||| | |||||
Sbjct: 34 tctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||||| ||||||||||
Sbjct: 94 ttcattaacatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 69.9 bits (35), Expect = 7e-12
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
|||| |||| |||||||| |||||| ||||||||||||||| | ||| |||||||||
Sbjct: 99 tctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctaga 40
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||||||| |||||||||||| ||||||||||
Sbjct: 39 ttcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 67.9 bits (34), Expect = 3e-11
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cac--atatatgtctaga 69
||||||||| ||||||| |||||| ||||||||||||||| || |||||| ||||||
Sbjct: 4 tctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctaga 63
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||||||| ||||||||||||| |||| |||||
Sbjct: 64 ttcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 72/82 (87%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 25 cacatttatatagatgttaatgaatctag-cacatatatgt--ctagatttattaacaca 81
||||||||||| |||| |||||||||||| || |||||| | ||||||| ||||||| |
Sbjct: 117 cacatttatattgatgataatgaatctagacatatatatctatctagattcattaacata 58
Query: 82 aatatgaatgtgggcaatgcta 103
|||||||||||||| |||||||
Sbjct: 57 aatatgaatgtgggaaatgcta 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 85/104 (81%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatt 71
||||||| |||||||| |||| |||||||||||||||| | |||||||||||||||
Sbjct: 36 tagcatttcccacattcatatttatgttaatgaatctagatagatatatatgtctagatt 95
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||| || ||||| |||||| |||||||||| | ||||||
Sbjct: 96 cattatcatcaatataaatgtgaaaaatgctagaatggcttata 139
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 69.9 bits (35), Expect = 7e-12
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagatttat 74
||||| ||||||||| ||| ||||||||||||||||| | | ||||||||||||| ||
Sbjct: 123 tagcactacccacatacataaagatgttaatgaatcta-aatacatatgtctagattcat 65
Query: 75 taacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||| | |||||||||||||| |||| |||||||||
Sbjct: 64 taacatctaaatgaatgtgggcaacgctacaaagtctta 26
Score = 58.0 bits (29), Expect = 3e-08
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 23 cccacatttatatagatgttaatgaatctagcacatatatgtctagatttattaacacaa 82
|||||||| || ||||||||||||||||||| |||||| | | |||||| |||||||
Sbjct: 44 cccacattcatttagatgttaatgaatctag-acatatgtatttagattcattaacatct 102
Query: 83 atatgaatgtgggcaatgctagaaagtcttata 115
|||| ||||||| | ||||| |||||||||||
Sbjct: 103 ttatgtatgtgggtagtgctaaaaagtcttata 135
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctaga 69
||||||||| ||||||| |||| |||||||||||||||| || |||||| | |||||
Sbjct: 129 tctagcattctccacattcatattaatgttaatgaatctagacatatatatctatctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgcta 103
|| |||||||| |||||||||||||| |||||||
Sbjct: 69 ttcattaacactaatatgaatgtgggaaatgcta 36
Score = 65.9 bits (33), Expect = 1e-10
Identities = 80/95 (84%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctagatt 71
||||||| |||||||| |||| ||||||||||||||| | |||||||||||||||
Sbjct: 36 tagcatttcccacattcatattagtgttaatgaatctagatagatatatatgtctagatt 95
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
||||||| ||||||||||||| ||||||||||
Sbjct: 96 cattaacattaatatgaatgtggagaatgctagaa 130
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||||||| |||||| |||| ||||||||||||||||| | |||||||||||||
Sbjct: 34 tctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||||||||||| ||| ||||||
Sbjct: 94 ttcattaacaacaatatgaatgtgggaaatactagaa 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 81/97 (83%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctaga 69
||||| ||| |||||||| |||| | ||||||||||||||| || ||||| | ||||||
Sbjct: 129 tctagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| |||||| |||||| ||||||||||
Sbjct: 69 ttcattaacatcaatatggatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 3e-11
Identities = 89/107 (83%), Gaps = 9/107 (8%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacat--------atatg 63
|||| |||| |||||||| |||| ||||||||||||||||| ||||| ||||
Sbjct: 107 tctaacattgcccacattcatatggatgttaatgaatctagacacattaatatccatata 48
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtc 110
|||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 6 tctagcattgcccacattcatatggatgttaatgaatctag 46
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtc 110
|||||||||| ||||||| |||||||||||||||||| |||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataa 23
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||||||||||
Sbjct: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| |||||||| ||||| |||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacaccaatataaatgtgggaaatgctagaa 33
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||||||| ||||||||||||| | ||||||||||||||| |||||||| ||||
Sbjct: 34 tctagcatttcccacatttatattggtgttaatgaatctag-acatatatatcta 87
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
||||||||| |||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctag-acatatat 82
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 87/103 (84%), Gaps = 5/103 (4%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctagat 70
|||||||||||||||| ||||||||| |||| |||||| | ||||| |||||||||
Sbjct: 36 tagcattacccacattcatatagatgctaataaatctat-atatataataatgtctagat 94
Query: 71 ttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
| |||| || |||||||||||||||||| ||||||||||||
Sbjct: 95 tcattagcatctatatgaatgtgggcaatgttagaaagtctta 137
Score = 63.9 bits (32), Expect = 4e-10
Identities = 88/105 (83%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcaca----tatatgtctag 68
|||| |||| |||||||| ||||||||| |||||||||||| ||| ||||| | |||
Sbjct: 129 tctaacattgcccacattcatatagatgctaatgaatctag-acattattatatatatag 71
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||| || ||||||||||||| ||||||| |||||||||
Sbjct: 70 atttattagcatctatatgaatgtgggtaatgctataaagtctta 26
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataa 23
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 91 gtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataa 86
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||| | ||||||||||||||| ||||||||||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgggaaatgctagaa 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
||||||||| |||||||| |||| || ||||||||||||| ||||||||
Sbjct: 106 tctagcatttcccacattcatatttatattaatgaatctag-acatatat 58
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 26
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 34 tctagcattgtccacattcatatagatgttaataaatctag 74
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 79/92 (85%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctag-cacatatatgt--ctagatttat 74
|||| |||||||| |||| |||| |||||||||||| || |||||| | ||||||| ||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 75 taacacaaatatgaatgtgggcaatgctagaa 106
||||| |||||||||||||| ||||||||||
Sbjct: 64 taacaacaatatgaatgtgggaaatgctagaa 33
Score = 65.9 bits (33), Expect = 1e-10
Identities = 77/91 (84%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| | ||||||||||||||| | |||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatg 100
|| |||| || |||||||||||||| ||||
Sbjct: 94 ttcattaccatcaatatgaatgtgggaaatg 124
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 58 tatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||| ||||||| |||||||||||| ||||||||||||||||||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 103 tctagcattgtccacattcatatagatgttaatgaatctag 63
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||| ||||||||||||||||||
Sbjct: 56 atatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||||||||||||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtctta 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaat 49
||||||||| |||||||| ||||||||||||||||||
Sbjct: 34 tctagcattgcccacattcatatagatgttaatgaat 70
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 34 tctagcattacccacattcatttagatgttaatgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 74/86 (86%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 31 tatatagatgttaatgaatctag-cacata--tatgtctagatttattaacacaaatatg 87
|||||| ||||||||||||||| |||||| ||||| |||||| ||||||| | |||
Sbjct: 111 tatatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatg 52
Query: 88 aatgtgggcaatgctagaaagtctta 113
|||||||| |||||||||||||||||
Sbjct: 51 aatgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 34 tctagcatttcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 88/105 (83%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcaca----tatatgtctag 68
|||||||||||||||||| || ||| ||||||||||||||| ||| ||||| | |||
Sbjct: 34 tctagcattacccacattcatttagttgttaatgaatctag-acatgtgtatatatttag 92
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||| ||||||| ||||| || ||| ||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtctta 137
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||| ||||||| | ||||||||||| |||||||||||||||||
Sbjct: 78 atgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||||||||||| |||||||||||||||||||||
Sbjct: 107 tctagcattacccacatacatatagatgttaatgaatcta 68
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||| |||||| ||||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 117
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||||||||||| |||||||||||||||||||||
Sbjct: 34 tctagcattacccacatacatatagatgttaatgaatcta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||| |||||| ||||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 24
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 4e-10
Identities = 83/101 (82%), Gaps = 8/101 (7%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| ||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 118 tctagcattgcccacatacatatagatgttaatgaatctag--------tgtctagattc 67
Query: 73 attaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| | |||||||| |||||||||||||||||||
Sbjct: 66 attaacatctaagtgaatgtgagcaatgctagaaagtctta 26
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 65 ctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||| ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtctta 126
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 4e-10
Identities = 79/94 (84%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
||||||||| |||||||| |||| ||||| ||||||||||| | | |||||||||||
Sbjct: 123 tctagcatttcccacattcatattgatgtcaatgaatctag---acagatgtctagattc 67
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||| ||| |||||||||||||| |||| |||||
Sbjct: 66 attgacatcaatatgaatgtgggaaatgatagaa 33
Score = 63.9 bits (32), Expect = 4e-10
Identities = 79/94 (84%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattt 72
|||| |||| |||||||| |||| ||||| ||||||||||| | || ||||||||||
Sbjct: 34 tctatcatttcccacattcatattgatgtcaatgaatctag---acatctgtctagattc 90
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||| ||| |||||||||||||| ||||||||||
Sbjct: 91 attgacatcaatatgaatgtgggaaatgctagaa 124
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 37 gatgttaatgaatctagc-acatatatgtctagatttattaacacaaatatgaatgtggg 95
||||||||||||||||| | ||||||||||||||| ||||||| ||||||||| ||||
Sbjct: 51 gatgttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatggg 110
Query: 96 caatgcta 103
|||||||
Sbjct: 111 aaatgcta 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagattta 73
||||||| |||| ||| |||| ||||||||||||||||| || |||| | |||||||| |
Sbjct: 118 tagcatttcccatattcatattgatgttaatgaatctagacatatatctatctagattca 59
Query: 74 ttaaca 79
||||||
Sbjct: 58 ttaaca 53
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 119
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 111 tctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtaggcaatgctagaaagtctta 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatg 46
||||||||| || ||||| |||||||||||||||
Sbjct: 34 tctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtctta 26
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaat 49
||||||| |||||||| ||||||||||||||||||
Sbjct: 111 tagcattgcccacattcatatagatgttaatgaat 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagt 109
|||||| ||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagt 117
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 60 tatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 108 tctagcattgtccacattcatatagatgttaataaatctag 68
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtctta 105
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 72/85 (84%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 32 atatagatgttaatgaatctagc---acatatatgtctagatttattaacacaaatatga 88
|||| ||||||||||||||||| | ||||||||||||||| ||||| | |||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 89 atgtgggcaatgctagaaagtctta 113
||||||| ||| |||||| ||||||
Sbjct: 113 atgtgggaaatactagaatgtctta 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||| ||| |||||||| |||| ||| ||||||||||||| |||||||| ||||
Sbjct: 129 tctagtatttcccacattcatattgatattaatgaatctag-acatatatatcta 76
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 56 catatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||||||||| |||| || |||||||||||||| ||||||||||
Sbjct: 52 catatatgtctagattcattagtactaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||||| ||||||| | |||||| ||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtctta 26
Score = 58.0 bits (29), Expect = 3e-08
Identities = 87/104 (83%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatatatg--tctaga 69
||||||||| |||| ||| || ||||||||||||||||||| || || |||| | ||||
Sbjct: 34 tctagcattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|| ||||||| ||||| | ||||||||| |||||||||||||
Sbjct: 94 ttcattaacatccatatgtacgtgggcaatactagaaagtctta 137
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 61.9 bits (31), Expect = 2e-09
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 37 gatgttaatgaatctagc---acatatatgtctagatttattaacacaaatatgaatgtg 93
||||||||||||||||| | ||||||||||||||| ||||||| | ||||||||||
Sbjct: 62 gatgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtg 121
Query: 94 ggcaatgctagaa 106
|| ||||||||||
Sbjct: 122 ggaaatgctagaa 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||||
Sbjct: 133 tctagcatttcccacattcatagtgatgttaatgaatctag-acatatatatcta 80
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtctta 109
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 34 tctagcattgcccacatttttatggatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 88 aatgtgggcaatgctagaaagtctta 113
||||||||||||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaa 101
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaa 104
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
||||||||| | |||||| |||||||||||||||||||||| ||||||||
Sbjct: 103 tctagcattgcacacattcatatagatgttaatgaatctag-acatatat 55
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
|||||||||| ||||||| || ||||||||||||||||||| ||||||||
Sbjct: 34 tctagcattatccacattcatttagatgttaatgaatctag-acatatat 82
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
||||||||||||||| ||||||| | |||||||||| |||||||||||||||||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctta 26
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 73/85 (85%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 32 atatagatgttaatgaatctag-cacata--tatgtctagatttattaacacaaatatga 88
||||||| ||||||||||||| |||||| |||||||||||| ||||||| | ||||
Sbjct: 53 atatagacgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatga 112
Query: 89 atgtgggcaatgctagaaagtctta 113
|| |||||||||||| |||||||||
Sbjct: 113 atatgggcaatgctaaaaagtctta 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag 53
||||||| |||| ||| || |||||||||||||||||||
Sbjct: 127 tagcattgcccatattcatttagatgttaatgaatctag 89
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||||| | |||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcactatgaatgtgggaaatgctagaa 33
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||||
Sbjct: 34 tctagcatttcccacattcatagtgatgttaatgaatctag-acatatatatcta 87
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 58 tatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||||||| ||| ||| ||||||||||||| | ||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaa 110
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
|||||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 111 tctagcattacccatattcatatagatgctaatgaatctag 71
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | || ||| ||||||||||||||||||||||
Sbjct: 34 tctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttata 115
|||||||| |||| |||||||||||||||||||
Sbjct: 89 atatgaatatgggtaatgctagaaagtcttata 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| ||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttata 24
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 108 tctagcattgtccatatttatatagatgttaatgaatctag 68
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||| ||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggcaatgctagaaagtctta 26
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgtta 43
||||||||| |||||||||||||||||||||
Sbjct: 34 tctagcattgcccacatttatatagatgtta 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 60 tatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||| ||||||| |||| ||| ||| ||||||||||||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtctta 116
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 79/95 (83%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 24 ccacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaacac 80
||||||| |||| |||||||||||||||| | |||||| |||||||| ||||| |
Sbjct: 45 ccacattcatattaatgttaatgaatctagataaatatatatatctagattcattaatat 104
Query: 81 aaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 105 caatatgaatgtgggaaatgctagaatgacttata 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 71/85 (83%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| |||||||| |||| ||| ||||||||||||| | |||| | ||||||
Sbjct: 129 tctagcatttcccacattcatattgatattaatgaatctagatatatatatttatctaga 70
Query: 70 tttattaacacaaatatgaatgtgg 94
|| ||||||| |||||||||||||
Sbjct: 69 ttcattaacattaatatgaatgtgg 45
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/87 (83%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 14 ctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattta 73
|||||||| |||||||| |||| ||||| ||||||||||| | | ||||||||||| |
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctag---acagatgtctagattca 32
Query: 74 ttaacacaaatatgaatgtgggcaatg 100
|| ||| |||||||||||||| ||||
Sbjct: 31 ttgacatcaatatgaatgtgggaaatg 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/87 (83%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatatatgtctagatttattaa 77
|||| |||||||| |||| ||||| ||||||||||| | || |||||||||| ||| |
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctag---acatctgtctagattcattga 61
Query: 78 cacaaatatgaatgtgggcaatgctag 104
|| |||||||||||||| ||||||||
Sbjct: 62 catcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 103 tctagcattgcccacatgcatatagatgttaatgaatctag 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 63 gtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 58.0 bits (29), Expect = 3e-08
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 23 cccacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaaca 79
|||||||| |||| ||| ||||||||||||| | ||||||||||||||| |||||||
Sbjct: 43 cccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaaca 102
Query: 80 caaatatgaatgtgg 94
|||||||||||||
Sbjct: 103 tcaatatgaatgtgg 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||||| |||| ||||||||||||||||| |||||||| ||||
Sbjct: 117 ccacattcatattgatgttaatgaatctag-acatatatatcta 75
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaa 116
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 82/98 (83%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacat----atatgtctag 68
||||||||| || | ||| |||||||||||||||||||||| |||| |||| |||||
Sbjct: 34 tctagcattgcctatattcatatagatgttaatgaatctag-acatagacatatatctag 92
Query: 69 atttattaacacaaatatgaatgtgggcaatgctagaa 106
||| ||||||| ||||||||||| ||| ||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaa 130
Score = 50.1 bits (25), Expect = 6e-06
Identities = 72/86 (83%), Gaps = 5/86 (5%)
Strand = Plus / Minus
Query: 25 cacatttatatagatgttaatgaatctagcacatat----atgtctagatttattaacac 80
|||||| |||| ||||||||||||||||| | |||| ||||||||||| |||||||
Sbjct: 117 cacattcatatggatgttaatgaatctag-atatatgtctatgtctagattcattaacat 59
Query: 81 aaatatgaatgtgggcaatgctagaa 106
|||||||| | |||||||||||||
Sbjct: 58 ctatatgaatataggcaatgctagaa 33
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||| |||||| ||||||| |||||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttata 121
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 111 tctagcatttcccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| |||||||||||||| ||||||||||
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatg 100
|||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 69 atatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatttatta 76
|||| |||||||| |||| |||| |||| ||||||| || |||||||||||| |||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatatgtctagttttatta 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 51 tagcacatatatgtctagatttattaacacaaatatgaatgtgggcaatg 100
||||| |||||||||||| || |||| || |||||||||||||| ||||
Sbjct: 54 tagcatatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 80/95 (84%), Gaps = 3/95 (3%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag-cacatatat--gtctagatt 71
||||||| | ||||| |||| |||| |||||||||||| || |||||| |||||||||
Sbjct: 127 tagcatttctcacatccatattgatgctaatgaatctagacatatatatccgtctagatt 68
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
||||| | || |||||||||||| ||||||||||
Sbjct: 67 cattaatataagtatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtctta 87
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 79 tctagcattgtccacattcatatagatgttaacgaatctag 39
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 78/94 (82%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
|||||| ||||||| || |||||||||||||||||||||| | | |||||| ||||
Sbjct: 34 tctagccttacccatatgcatatagatgttaatgaatctagatatagacatatgtttaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgcta 103
|| |||| || |||||||||||||||||||||
Sbjct: 94 ttcattaccatctatatgaatgtgggcaatgcta 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatcta 52
||||||| |||||||| ||||||||| |||||||||||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatcta 90
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 85 atgaatgtgggcaatgctagaaagtcttataa 116
|||||||||||||||| |||||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataa 23
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
|||||||| |||| ||||||||||||||||||||
Sbjct: 63 atatgaatatgggtaatgctagaaagtcttataa 96
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaat 49
|||||||||||||| ||| ||||||||| ||||||||
Sbjct: 85 tctagcattacccatattcatatagatgataatgaat 49
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 55 acatatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||||| ||| ||| |||||||||||| | ||||||||||
Sbjct: 79 acatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgt 64
||||||||| | |||||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 129 tctagcatttctcacattcatattgatgtcaatgaatctag-acatatatgt 79
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| ||||||| || |||||||||||||||||||
Sbjct: 34 tctagcattgcccacatatacatagatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 atgaatgtgggcaatgctagaaagtcttata 115
||||||||| | |||||||||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttata 119
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
|||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 105 tctaacattgcccacatatatatagatgttaatgaatcta 66
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 89 atgtgggcaatgctagaaagtcttata 115
|||||||||||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttata 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 atgtgggcaatgctagaaagtcttata 115
|||||||||||| ||||||||||||||
Sbjct: 89 atgtgggcaatgttagaaagtcttata 115
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 85 atgaatgtgggcaatgctagaaagtcttataa 116
|||||| |||||||||||||||||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataa 96
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||| |||| |||||||||||||||
Sbjct: 56 atatgaatgtggacaatactagaaagtcttata 24
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 101 tctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 129 tctagcatttcccacattcatatagatgttgatgaatcta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 72/85 (84%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 25 cacatttatatagatgttaatgaatctag-ca--catatatgtctagatttattaacaca 81
|||||| |||||||||||||||||||||| || |||||| | |||||| || ||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatc 105
Query: 82 aatatgaatgtgggcaatgctagaa 106
||||||||||||| ||||||||||
Sbjct: 106 tatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 68/81 (83%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 25 cacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaacaca 81
||||||||||| ||||||||| |||||| | ||||||||||||||| |||||||
Sbjct: 117 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 58
Query: 82 aatatgaatgtgggcaatgct 102
||||||||| |||| ||||||
Sbjct: 57 aatatgaatatgggaaatgct 37
Score = 50.1 bits (25), Expect = 6e-06
Identities = 69/82 (84%), Gaps = 5/82 (6%)
Strand = Plus / Plus
Query: 16 agcattacccacatttatatagatgttaatgaatctagcacatatatgtc----tagatt 71
|||||| |||| ||| |||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 37 agcatttcccatattcatattgatgttaatgaatctag-acatatatatctatatagatt 95
Query: 72 tattaacacaaatatgaatgtg 93
|||||||| ||||| ||||||
Sbjct: 96 tattaacatcaatataaatgtg 117
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 38 atgttaatgaatctagc-acatatatgtctagatttattaacacaaatatgaatgtgggc 96
|||||||||||||||| | ||||||||||| ||| ||||||| | ||||||||||||
Sbjct: 102 atgttaatgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtggga 43
Query: 97 aatgctagaaagtcttata 115
||||| |||| | ||||||
Sbjct: 42 aatgccagaatgacttata 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 17 gcattacccacatttatatagatgttaatgaatctag-cacatatatgtctagatttatt 75
||||| |||||||| ||| |||||||||||| ||| || |||||| |||||||| |||
Sbjct: 38 gcatttcccacattcatactcatgttaatgaatttagacatatatatatctagattcatt 97
Query: 76 aacacaaatatgaatgtgggcaatgctagaa 106
|||| | |||||||||| ||||||||||
Sbjct: 98 aacatgagtatgaatgtgaaaaatgctagaa 128
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 80/97 (82%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||||||| | |||||| ||||| |||||||||||||| | |||||||||||||
Sbjct: 129 tctagcatttctcacattcatatattagttaatgaatctagatagatatatatgtctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||| | |||||||||||||| |||| |||||
Sbjct: 69 ttcattaatatcaatatgaatgtgggaaatgatagaa 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 81/97 (83%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag-cacatata--tgtctaga 69
|||| |||| |||||||| |||| ||| ||||||||||||| || ||||| | ||||||
Sbjct: 34 tctatcatttcccacattcatattgatattaatgaatctagacatatatatctatctaga 93
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| |||||| | ||||||||||| | ||||||||||
Sbjct: 94 ttcattaactaatatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
||||||||||||||| |||| || |||||||||||| | |||||||||| | ||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttata 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatat 62
||||||||| | |||||| |||| |||| |||||||||||| ||||||||
Sbjct: 96 tctagcatttctcacattcatattgatgctaatgaatctag-acatatat 48
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 60 tatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||| || ||||||| |||||||||||||| ||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaa 118
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| |||||||||||| ||||
Sbjct: 117 tctagcatttcccacattcatattgatgttaatgaaactag 77
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||| ||||||||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctt 112
||||||||||| |||||| || ||||||||||||||||| |||||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtctt 112
||||||||||||| |||||| || ||||||||||||||||| |||| ||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 16 agcattacccacatttatatagatgttaatgaatctag 53
|||||| |||||||| | ||||| ||||||||||||||
Sbjct: 11 agcattgcccacattcacatagaagttaatgaatctag 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 16 agcattacccacatttatatagatgttaatgaatctag 53
|||||| |||||||| | ||||| ||||||||||||||
Sbjct: 131 agcattgcccacattcacatagaagttaatgaatctag 94
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||| ||||||||||||||||||||||
Sbjct: 56 atatgaatatgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 80/97 (82%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag---cacatatatgtctaga 69
||||||||| || | ||| |||||||||||||||||||||| | | |||| ||||||
Sbjct: 129 tctagcattgcctatattcatatagatgttaatgaatctagatatagacatatatctaga 70
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|| ||||||| ||||||||||| ||| ||||||||
Sbjct: 69 ttcattaacatccatatgaatgtgagcattgctagaa 33
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||| ||||||||||||||
Sbjct: 63 atatgaatgtgggcaacgctagaaagtctta 93
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/75 (84%), Gaps = 5/75 (6%)
Strand = Plus / Minus
Query: 32 atatagatgttaatgaatctagcacatatatgtctagatttattaacacaaatatgaatg 91
|||| ||||||||||||||||| |||||| |||||| ||||||| ||||||||||
Sbjct: 102 atattgatgttaatgaatctag-----atatgtttagattcattaacatcaatatgaatg 48
Query: 92 tgggcaatgctagaa 106
|||| |||| |||||
Sbjct: 47 tgggaaatgttagaa 33
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
|||| |||| |||||||| |||| ||||||||||||||||
Sbjct: 34 tctaacatttcccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 71/85 (83%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 25 cacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaacaca 81
|||||| |||| ||| ||||||||||||| | ||||||||||||||| ||||| |
Sbjct: 117 cacattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 82 aatatgaatgtgggcaatgctagaa 106
|||||||||||||| |||| |||||
Sbjct: 57 aatatgaatgtgggaaatgttagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
|||| |||| |||||||| |||| ||| ||||||||||||| |||||||| ||||
Sbjct: 34 tctaacatttcccacattcatattgatattaatgaatctag-acatatatatcta 87
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtgggcaacgctagaaagtctta 26
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
||||||||||||||||||||||||| |||||
Sbjct: 69 atatgaatgtgggcaatgctagaaactctta 99
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 54.0 bits (27), Expect = 4e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 14 ctagcattacccacatttatatagatgttaatgaatctagcacatatatgtctagattta 73
|||||||| ||||| || |||| ||| ||||||||||||| |||| | |||||||| |
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagattatatctatctagattca 32
Query: 74 ttaacacaaatatgaatgtgggcaatgctag 104
|||| | |||||||| ||||| ||||||||
Sbjct: 31 ttaatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||||||||| ||||||||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtc 110
||||||||||| |||||| || ||||||||||||||||| |||||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 16 agcattacccacatttatatagatgttaatgaatctag 53
|||||| |||||||| | ||||| ||||||||||||||
Sbjct: 9 agcattgcccacattcacatagaagttaatgaatctag 46
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 16 agcattacccacatttatatagatgttaatgaatctag 53
|||||| |||||||| | ||||| ||||||||||||||
Sbjct: 129 agcattgcccacattcacatagaagttaatgaatctag 92
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 68/81 (83%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 25 cacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaacaca 81
||||||||||| ||||||||| |||||| | ||||||||||||||| |||||||
Sbjct: 44 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 103
Query: 82 aatatgaatgtgggcaatgct 102
||||||||| |||| ||||||
Sbjct: 104 aatatgaatatgggaaatgct 124
Score = 50.1 bits (25), Expect = 6e-06
Identities = 69/82 (84%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 16 agcattacccacatttatatagatgttaatgaatctagcacatatatgtc----tagatt 71
|||||| |||| ||| |||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 124 agcatttcccatattcatattgatgttaatgaatctag-acatatatatctatatagatt 66
Query: 72 tattaacacaaatatgaatgtg 93
|||||||| ||||| ||||||
Sbjct: 65 tattaacatcaatataaatgtg 44
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgcta 103
||||||||||||||||||| ||||||||| |||| |||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgcta 105
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 12 ctctagcattacccacatttatatagatgttaatgaatctag 53
||||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 34 ctctaacatttcccacattcatattgatgttaatgaatctag 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctaga 105
|||||||| ||||||| |||||||||||||| |||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatc 50
||||||||| |||||||| |||| ||||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaatc 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 gatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||| ||||||| |||||||||||||| ||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatc 50
||||||||| | |||||| |||| ||||||||||||||
Sbjct: 112 tctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||| |||||||||||||||| | |||||||||||| ||| ||||||
Sbjct: 67 atatatatctagatttattaacatcactatgaatgtgggaaatactagaa 116
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 91 gtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataa 69
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||||| ||||||||| || | ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatatatgtcta 67
||||||||| | || ||| |||| ||||||||||||||||| |||||||| ||||
Sbjct: 34 tctagcatttctcatattcatattgatgttaatgaatctag-acatatatatcta 87
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 tgaatgtgggcaatgctagaaagtcttata 115
|||| |||||||||||||||||||||||||
Sbjct: 110 tgaacgtgggcaatgctagaaagtcttata 139
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 58 tatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| ||||||| ||||||||||||| |||| ||||| | ||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttata 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatctag 53
||||||| |||| |||||||||||||||||
Sbjct: 99 ccacattcatattgatgttaatgaatctag 70
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 110 tctagcatttcccatattcatattgatgttaatgaatctag 70
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | ||||||||||| ||||||||| |||||||
Sbjct: 34 tctagcatttctcacatttatattgatgttaataaatctag 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 65 ctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||| |||||| | ||||||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||| |||||| ||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttata 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 111 tctagcattttccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| |||||||||||||| ||||||||||
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||| |||||||||||||| ||||||||||
Sbjct: 73 tttattaacatcaatatgaatgtgggaaatgctagaa 109
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| || ||||| |||| |||||||||||||||||
Sbjct: 94 tctagcatttcctacattcatattgatgttaatgaatctag 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaa 95
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 85 atgaatgtgggcaatgctagaaagtctta 113
||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtctta 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| | ||||||||| ||||| ||||||||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttata 105
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | |||||| |||| |||||||||||||||||
Sbjct: 34 tctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| ||||||| |||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 72/87 (82%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 23 cccacatttatatagatgttaatgaatctagcac---atatatgtctagatttattaaca 79
|||||||| |||| |||| |||||||||||| | |||| | |||||||| ||||||
Sbjct: 119 cccacattaatattgatggtaatgaatctagaaatatatatctatctagattcattaacg 60
Query: 80 caaatatgaatgtgggcaatgctagaa 106
|||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaa 33
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| || ||||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgacgttaatgaatctag 74
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 62 tgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||||| ||| ||| |||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 33
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| ||||| |||||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgtcaatgaatctag 74
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | |||||| |||| |||||||||||||||||
Sbjct: 34 tctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| ||||||| |||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 34 tctagcatttcccatattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
|||||||||| ||| ||| ||||||||||||| ||||||||
Sbjct: 34 tctagcattaaccatattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttata 115
|||||||| ||| ||||||||||||||||||||
Sbjct: 54 atatgaatatggacaatgctagaaagtcttata 86
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||||||| |||| ||| |||||||||||||
Sbjct: 86 tctagcatttcccacattcatattgatattaatgaatctag 46
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 59 atatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||| |||||||| ||||| | |||||||||||||| ||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaa 87
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
|||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 106 tctaacatttcccacattcatattgatgttaatgaatctag 66
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| ||||||| |||||||||||||| |||| ||||| | ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttata 116
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 34 tctagcattttccacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| ||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||| || |||||||||||||||||
Sbjct: 88 atatgaatgtggacagtgctagaaagtcttata 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatc 50
||||||| |||||||||||||||||||
Sbjct: 99 ccacattcatatagatgttaatgaatc 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
|||||||| ||| || ||||||||||||||||||
Sbjct: 56 atatgaatatggacagtgctagaaagtcttataa 23
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 34 tctagcatttcccatattcatattgatgttaatgaatctag 74
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 111 tctagcatttcccatattcatattgatgttaatgaatctag 71
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
|||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 107 tctaacatttcccacattcatattgatgttaatgaatctag 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||||| ||||||| |||||||||||||| |||| |||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaa 108
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | |||||| |||| |||||||||||||||||
Sbjct: 98 tctagcatttctcacattcatattgatgttaatgaatctag 58
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| ||||||| |||||||||||| | |||||||||| | ||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttata 108
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| ||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtctta 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| | ||||| |||||||||||||||||||||
Sbjct: 129 tctagcattgctcacatacatatagatgttaatgaatcta 90
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 34 tctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagc 54
||||||| |||||||| |||| |||| |||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgctaatgaatctagc 75
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| |||| || |||||||||||||| |||||||||| | ||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 113
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 34 tctagcattttccacaattatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 18 cattacccacatttatatagatgttaatgaatctag 53
|||| |||||||| |||| |||||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatct 51
|||||||||| |||||||||||||||||
Sbjct: 78 ccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctagc 54
||||||| |||||||| |||| |||| |||||||||||||
Sbjct: 112 tagcatttcccacattcatattgatgctaatgaatctagc 73
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctag 53
|||| |||||||| |||| |||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgaatctag 77
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||||||| |||| || |||||||||||||| |||||||||| | ||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 24
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta 52
|||||||| |||||||| |||| ||||||||||||||||
Sbjct: 103 tctagcatatcccacattcatattgatgttaatgaatcta 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 61 atgtctagatttattaacacaaatatgaatgtgggcaatgctagaaagtcttata 115
|||| |||||| ||||||| |||||||||||||| ||||||||| | ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttata 113
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaa 48
||||| ||| ||||||||||||| ||||||||||||
Sbjct: 122 tctagtatttcccacatttatattgatgttaatgaa 87
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaa 48
||||||||| |||||||||||| ||||||||||||
Sbjct: 92 tctagcatttcccacatttatactgatgttaatgaa 57
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatc 50
||||||| |||||||| |||| ||||||||||||||
Sbjct: 103 tagcatttcccacattcatattgatgttaatgaatc 68
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 71/86 (82%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 31 tatatagatgttaatgaatctag---cacatatatgtctagatttattaacacaaatatg 87
||||||||||||||||||||||| || | |||| |||||||| ||||| | | ||
Sbjct: 50 tatatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaata 109
Query: 88 aatgtgggcaatgctagaaagtctta 113
||||||| |||||||| |||||||||
Sbjct: 110 aatgtggacaatgctaaaaagtctta 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag 53
||||||| |||||||||| ||||| |||||||||||||
Sbjct: 125 tagcattgtccacatttatttagatattaatgaatctag 87
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaa 48
||||||||| |||||||| |||| ||||||||||||
Sbjct: 34 tctagcatttcccacattcatattgatgttaatgaa 69
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 66 attaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtctta 113
|||||||||||||| |||||||||| ||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgtctta 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag 53
||||||| |||| |||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccatatttatattgatgctaatgaatctag 74
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 56 catatatgtctagatttattaacacaaatatgaatgtgg 94
||||||| |||||||| ||||||| |||||||||||||
Sbjct: 52 catatatatctagattcattaacatcaatatgaatgtgg 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 24 ccacatttatatagatgttaatgaatctag 53
||||||| |||| |||||||||||||||||
Sbjct: 90 ccacattcatattgatgttaatgaatctag 61
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tagcattacccacatttatatagatgttaatgaatctag 53
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 121 tagcattttccacatttatattgatgctaatgaatctag 83
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 64 tctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 56 catatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||| |||||||||| ||||||| |||||||||||| | ||| ||||||
Sbjct: 83 catatttgtctagattcattaacatcaatatgaatgtgagaaatactagaa 33
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 70/85 (82%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagc---acatatatgtctaga 69
||||||||| | |||||| |||| ||| |||||||||||| | |||||||||||||
Sbjct: 34 tctagcatttctcacattcatattgatactaatgaatctagatagatatatatgtctaga 93
Query: 70 tttattaacacaaatatgaatgtgg 94
|| |||| || |||||||||||||
Sbjct: 94 ttcattagcatcaatatgaatgtgg 118
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatga 47
||||||||| |||||||| |||| |||||||||||
Sbjct: 101 tctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtctta 113
|||||||| || |||||||||||||||||||
Sbjct: 57 atatgaatatgagcaatgctagaaagtctta 87
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| | |||| ||||||||||||| ||||||||||
Sbjct: 81 atatatgtctagattcactaacctccatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 73 attaacacaaatatgaatgtgggcaatgctagaa 106
||||||| |||||||||||||| ||||||||||
Sbjct: 85 attaacatcaatatgaatgtgggaaatgctagaa 118
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttata 117
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttata 100
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 84 aatatgaatgtgggaaatgctagaatgacttata 117
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
|||||||||||| ||||||| ||||||||||||
Sbjct: 56 atatgaatgtggataatgctataaagtcttataa 23
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
|||| ||||||| ||||||||||||||||||||
Sbjct: 63 atataaatgtggataatgctagaaagtcttataa 96
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttata 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttata 96
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 aatatgaatgtgggcaatgctagaaagtcttata 115
|||||||||||||| |||||||||| | ||||||
Sbjct: 62 aatatgaatgtgggaaatgctagaatgacttata 95
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 cccacatttatatagatgttaatgaatcta 52
||||||| |||||||||||||||||||||
Sbjct: 1 cccacatacatatagatgttaatgaatcta 30
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 23 cccacatttatatagatgttaatgaatcta 52
||||||| |||||||||||||||||||||
Sbjct: 63 cccacatacatatagatgttaatgaatcta 34
