miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01855;Plant_SRP;EU957112.1/1-304 4577:Zea mays
Length = 304
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ggttacaagctctcgctgctgagctcggc 29
||||||||||||||||| |||||||||||
Sbjct: 29 ggttacaagctctcgctactgagctcggc 1
>RF01855;Plant_SRP;ABXC01006847.1/72345-72042 4558:Sorghum bicolor
(sorghum)
Length = 304
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ggttacaagctctcgctgctgagctcggc 29
|||||||||||| ||||||||||||||||
Sbjct: 29 ggttacaagctcgcgctgctgagctcggc 1
>RF01855;Plant_SRP;ABXC01006362.1/9291-9008 4558:Sorghum bicolor
(sorghum)
Length = 284
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ggttacaagctctcgctgctgagctcggc 29
||||||||||||||||| |||||||||||
Sbjct: 29 ggttacaagctctcgctactgagctcggc 1
>RF01855;Plant_SRP;AC121489.2/123851-124138 39947:Oryza sativa
Japonica Group
Length = 288
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ggttacaagctctcgctgctgagctcggc 29
||||||||||||||||| |||||||||||
Sbjct: 29 ggttacaagctctcgctactgagctcggc 1
>RF01855;Plant_SRP;AC137997.2/82646-82341 39947:Oryza sativa
Japonica Group
Length = 306
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ggttacaagctctcgctgctgagctcggc 29
|||||||||||| ||||||||||||||||
Sbjct: 29 ggttacaagctcgcgctgctgagctcggc 1
>RF01855;Plant_SRP;CAAP02000701.1/26439-26745 29760:Vitis vinifera
Length = 307
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2 gttacaagctctcgctgctgagctcggc 29
||||||||||| ||||||||||||||||
Sbjct: 28 gttacaagctcgcgctgctgagctcggc 1
