miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 180 bits (91), Expect = 3e-45
Identities = 121/131 (92%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||| | ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcattacccacattcatatatatgttg 64
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 65 tctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaa 124
Query: 126 cggaggaagta 136
| |||||||||
Sbjct: 125 cagaggaagta 135
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 62 acatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 153 bits (77), Expect = 7e-37
Identities = 118/131 (90%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| |||||||||||||||| |||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatg--- 61
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 62 tctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaa 121
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 122 cggagggagta 132
Score = 103 bits (52), Expect = 6e-22
Identities = 113/131 (86%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|| || | ||||||||||||||||||| ||| ||||||| |||||||||||||||
Sbjct: 72 at--gaatc-tagacatatatatgaatgtgggtaatactagaaagtcttataatatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 149 bits (75), Expect = 1e-35
Identities = 118/131 (90%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||||||||| ||||| |||||||||||||||||||| |||||||||||||| | ||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatatatgta-tg 76
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 75 cctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 111/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
||||| ||||| |||||| |||||||||||||||||||| |||||||||||||| ||| |
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
| | || | | | ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 64 aacga-atctaggcatacatatatgaatgtgggcaatgctagaaagtcttataatctgaa 122
Query: 125 acggaggaagta 136
| ||||| ||||
Sbjct: 123 atggaggtagta 134
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 137 bits (69), Expect = 4e-32
Identities = 120/136 (88%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 3 agatactacctccctttcatgttataagactttctagcattacccacattcatataaatg 62
||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||| |||
Sbjct: 140 agatacttcctccgtttcatattataagactttctagcattgtccacattcatatagatg 81
Query: 63 ctgt--ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataata 120
||| ||||||| ||| |||| ||| ||||||||| |||||||||||| ||||||||||
Sbjct: 80 ttgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataata 21
Query: 121 tgaaacggaggaagta 136
||||||||||| ||||
Sbjct: 20 tgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 80 acatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 135 bits (68), Expect = 2e-31
Identities = 117/131 (89%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| |||||||||||||||||||| |||||||||| || || ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcacatg--tg-tg 61
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 121
Query: 126 cggaggaagta 136
| |||||||||
Sbjct: 122 ctgaggaagta 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 88 tgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 133 bits (67), Expect = 7e-31
Identities = 114/131 (87%), Gaps = 9/131 (6%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| |||||||| ||||||||||| ||||||||||| |
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat---------g 55
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 116 cggaggaagta 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 110/132 (83%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
||||| ||||| |||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 127 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg-- 70
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
|| || | || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 69 -------ttaatgaatctagacatgaatgtgggcaatgctagaaaatcttataatatgaa 17
Query: 125 acggaggaagta 136
||||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 127 bits (64), Expect = 4e-29
Identities = 116/131 (88%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| |||||||||||||||||||| |||||||||| | || ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcacgtg--tg-tg 61
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 121
Query: 126 cggaggaagta 136
| |||||||||
Sbjct: 122 ctgaggaagta 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 88 tgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 77 tgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||| ||| |||| ||||||| |||||||||||||||||
Sbjct: 90 tagattcattgacatctatatgaagatggacaattctagaaagtcttataatatgaaacg 149
Query: 128 gaggaagtaa 137
|||| |||||
Sbjct: 150 gagggagtaa 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatata 57
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctag 39
|||| ||||| |||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcatattataagactttctag 125
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 117 bits (59), Expect = 4e-26
Identities = 114/131 (87%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| || ||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagata-tg 63
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||| ||| |||| |||||||||||||||||||||||||| ||||| | | |||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 124 cggaggaagta 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||| |||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 57 tatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 113 bits (57), Expect = 6e-25
Identities = 116/135 (85%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgc- 63
||||| ||||| ||| || |||||||||| ||||| ||| |||||||||||||| ||
Sbjct: 4 atacttcctccgttttatattataagactatctagtattgcccacattcatatatatata 63
Query: 64 --tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatat 121
|||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 64 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 123
Query: 122 gaaacggaggaagta 136
|||||||||| ||||
Sbjct: 124 gaaacggagggagta 138
Score = 107 bits (54), Expect = 4e-23
Identities = 117/137 (85%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
||||| ||||| |||||| ||||||||||||||| |||| |||||||||||||| |||||
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 65 g-----tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataat 119
|||||| ||| || ||||||||||||||||||||| ||||| | |||||||||
Sbjct: 79 aatgaatctaga--catatatatatatatgaatgtgggcaatactagatagtcttataat 22
Query: 120 atgaaacggaggaagta 136
|| ||||||||||||||
Sbjct: 21 ataaaacggaggaagta 5
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 98 caatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||| ||||||||||||||| ||||||||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagta 128
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatga 145
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 146 aacggaggaagta 158
Score = 89.7 bits (45), Expect = 9e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 72 ttcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggagg 131
|||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 132 aagta 136
||||
Sbjct: 9 gagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
|||| ||||| |||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatata 57
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 116 aacggagggagta 128
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatata 76
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 98 caatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||| ||||||||||||||| ||||||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 128 gaggaagta 136
|||||||||
Sbjct: 13 gaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 152 gagggagta 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 161 atactccctccgtttcatattataagactttctagcattgcccacattcatata 108
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 116/136 (85%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| |||||||||||||||||||||||| ||||||||| |||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 66 -----tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataata 120
|||||||||||| |||| ||||||||| || ||||||||||||| |||||| ||
Sbjct: 80 atgaatctagattcattaacatctatatgaatatgagcaatgctagaaagacttatatta 21
Query: 121 tgaaacggaggaagta 136
|||||| |||||||||
Sbjct: 20 tgaaacagaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||| ||||||||| |||| ||||||||||| ||||||| |||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 113/132 (85%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
||||| ||||| |||||| | ||||||||||||||||| ||||||||||||| |||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatg-- 61
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
|||||||||||| |||| ||||||||||||| |||||||||||| ||||| | ||||||
Sbjct: 62 -tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaa 120
Query: 125 acggaggaagta 136
|| |||| ||||
Sbjct: 121 acagagggagta 132
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| ||||||||||||| |||||||||||| ||||| | ||||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 103 bits (52), Expect = 6e-22
Identities = 116/138 (84%), Gaps = 7/138 (5%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgc-- 63
|||| ||||| |||||| | ||||||||||||||||| |||||||||||||| |||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtgt 83
Query: 64 -----tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataa 118
|||||| ||||||| |||| |||||||||||||||||||||||||| ||||| |
Sbjct: 82 ctgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 23
Query: 119 tatgaaacggaggaagta 136
||||||||||||| ||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||||||||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaa 148
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 149 cggagggagta 159
Score = 91.7 bits (46), Expect = 2e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 64 tgtctagattcattta-catatatatgaatgtgggcaatgctagaaaatcttataatatg 122
|||||||||| ||||| ||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 78 tgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatg 19
Query: 123 aaacggaggaagta 136
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattacccacattcatata 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatata 107
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 147
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 148 cggaggaagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||| | ||||||| ||| ||||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 159 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatata 106
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 2e-21
Identities = 99/115 (86%), Gaps = 5/115 (4%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgct-----gtctagattcatttaca 81
||||||||||||||||| || ||||||||||| ||| | || |||||||||| |||
Sbjct: 26 taagactttctagcattgcctacattcatatagatgttaatgtgtatagattcattaaca 85
Query: 82 tatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
| |||||||||||||||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 86 tctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 140
Score = 79.8 bits (40), Expect = 9e-15
Identities = 112/136 (82%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| | ||||||||||||||||| |||||||||||||| ||| |
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 66 -----tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataata 120
|||| | |||| |||| ||||||||||| |||||||||||||| ||||| | ||
Sbjct: 80 atgaatctatacacattaacatctatatgaatgtaggcaatgctagaaagtcttacatta 21
Query: 121 tgaaacggaggaagta 136
||||||||| ||||||
Sbjct: 20 tgaaacggaagaagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||| ||||||||| ||| ||||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||||||||||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| | |||| |||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatata 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 97 gcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||||||||||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||| | ||||||||| ||| ||||| | |||||
Sbjct: 84 tgtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatga 143
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 144 aacggagggagta 156
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| | |||| |||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatata 57
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||||||||||| ||||| | |||||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 144 aacggaggaagta 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| |||| |||||||| | |||||||||||||| ||||| | ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 127 ggaggaagta 136
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatg 62
|||| ||||| |||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatg 100
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||||||||||||||||||||| |||||||| ||||| | |||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 124 aacggaggaagta 136
||| |||||||||
Sbjct: 17 aaccgaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| | || |||||||||||||||||||||| ||| ||||| | ||||||||
Sbjct: 90 tagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaacc 149
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 150 gagggagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||| || ||||||||||||||
Sbjct: 26 taagactttctagccttgcccacattcatata 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||||||| ||||||| ||||||||||||||
Sbjct: 137 taagactttttagcattgcccacattcatata 106
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77 tgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataacttga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 69 agattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacgg 128
||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 91 agattcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacgg 150
Query: 129 aggaagta 136
||| ||||
Sbjct: 151 aggtagta 158
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||||||||| ||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatata 106
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 agatactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||
Sbjct: 2 agatacttcctccgtttcaagttataagactttctggcattgcccacattcatata 57
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 127 ggaggaagtaac 138
||||| ||||||
Sbjct: 149 ggagggagtaac 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| || ||||| ||||||||||| |||||||| ||||| | |||||
Sbjct: 77 tgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattatga 18
Query: 124 aacggaggaagta 136
||| |||||||||
Sbjct: 17 aacagaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
|||| ||||| |||||| | ||||||||||||||||| |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgct 100
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 93.7 bits (47), Expect = 6e-19
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgct--gtctagattcatttacatat 84
||||||||||||||||| |||||||| ||||| ||| | ||||||||||||| |||| |
Sbjct: 26 taagactttctagcattgcccacatttatatagatgttatgtctagattcattaacatct 85
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
|||| ||| ||| |||||||||||| ||||| | ||||||||||||
Sbjct: 86 atataaatatggacaatgctagaaagtcttacattatgaaacggag 131
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| ||||| |||||||||||||||||||| ||||| | |||||||||||| |||||
Sbjct: 62 acatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 93.7 bits (47), Expect = 6e-19
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| ||||||||||||| ||| |||||||||||||| |||| |||||||||
Sbjct: 107 ttctagcatttcccacattcatattgatgttgtctagattcattgacatcaatatgaatg 48
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | ||||||||||||| ||||
Sbjct: 84 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 6e-19
Identities = 114/136 (83%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| ||||| ||||||||||||||||||| | ||| ||||||||| ||| ||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatatagatgatg 64
Query: 66 tcta----gattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatat 121
| || |||||||| |||| ||||||||||||| || ||||||||| ||||||| |
Sbjct: 65 tataccttgattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcct 124
Query: 122 gaaacggaggaagtaa 137
||||||||||||||||
Sbjct: 125 gaaacggaggaagtaa 140
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||| ||| || ||||||||| |||||||| ||||||||||| ||||
Sbjct: 57 tatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| ||||| | ||||||||||||||||| | |||||||||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatata 87
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgct--gtctagattcatttacatatatatgaa 91
|||||||||| |||||||||| ||| ||||| ||||||||| ||| |||| ||||||||
Sbjct: 33 ttctagcattgcccacattcacatagatgctatgtctagatttattaacatctatatgaa 92
Query: 92 tgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||| ||||||||||| | |||| | ||||||||||||| ||||
Sbjct: 93 tgtggacaatgctagaataacttacattatgaaacggagggagta 137
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 88 tgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||||||| | |||| | ||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 91.7 bits (46), Expect = 2e-18
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 11 cctccctttcatgttataagactttctagcattacccacattcatataaatgctgtctag 70
||||| |||||| ||||||||||||||||||| ||||||| ||||| ||| ||| |||
Sbjct: 10 cctccgtttcataatataagactttctagcattgcccacatctatatatatg-tgtttag 68
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| |||| ||||| |||||||||||| |||||| ||||||| | | ||||||||
Sbjct: 69 attcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggag 128
Query: 131 gaagta 136
| ||||
Sbjct: 129 gtagta 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggagg 131
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttatattatgaaacggagg 10
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtaa 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 93 gtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagtaa 105
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaa 60
|||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatataaa 59
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatg 62
|||| ||||| |||||| |||||||||||||||||||| ||||| || |||| ||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccacgtttatatgaatg 48
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||||||||| ||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatga 18
Query: 124 aacggaggaagtaa 137
||||||||||||||
Sbjct: 17 aacggaggaagtaa 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||| || ||||||||||||| ||||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 89.7 bits (45), Expect = 9e-18
Identities = 98/115 (85%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 25 tataagactttctagcattacccacattcatataaatgc---tgtctagattcatttaca 81
||||||||||||||||||||| ||||||||| || ||| ||| |||||||||| |||
Sbjct: 119 tataagactttctagcattactcacattcatttagatgtatatgtttagattcattaaca 60
Query: 82 tatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
| ||| | ||||||||||||||||||||||||| | | ||||||||||| ||||
Sbjct: 59 tctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 78 tacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||| || ||||||||| | ||||||||||| ||||||| | || |||||||||||||
Sbjct: 80 tacatctaaatgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||| | |||||||||||| ||||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| ||||||||||||| ||| ||||||| ||||| | |||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacg 149
Query: 128 gaggaagtaac 138
|||| ||||||
Sbjct: 150 gagggagtaac 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||||||||||||||||| | |||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatata 57
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| ||| |||||||||||||||||||||| ||||| | |||||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||| ||||||||||||||| ||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 128 gaggaagtaa 137
|||| |||||
Sbjct: 150 gagggagtaa 159
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
|||| ||||| |||||| | ||||||||||||||||| |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||||||||||||||| ||| ||||||||||
Sbjct: 137 taagactttctagcattgcccgcattcatata 106
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaaca 14
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 13 gagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||||||||| || |||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaat-----taagtcttataatatgaaacg 146
Query: 128 gaggaagta 136
|||||||||
Sbjct: 147 gaggaagta 155
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 17 tttcatgttataagactttctagcattacccacattcatata 58
|||||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 16 tttcatattataagactttctagaattgcccacattcatata 57
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||| |||| ||||||||||||||||| ||||||| |||||
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatga 145
Query: 124 aacggaggaagta 136
| |||||||||||
Sbjct: 146 agcggaggaagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
||||| |||| |||| ||||||||||| || ||||||||| ||||| | |||||||||
Sbjct: 73 tagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacg 14
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 25 tataagactttctagcattacccacattca 54
||||||||||||||||||| ||||| ||||
Sbjct: 139 tataagactttctagcattgcccacgttca 110
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 114/138 (82%), Gaps = 7/138 (5%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgc-- 63
|||| ||||| |||||| | ||||||||||||||||| |||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtgt 64
Query: 64 -----tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataa 118
|||||| ||||||| |||| |||||||||||||||||||||| ||| | ||| |
Sbjct: 65 ctgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacat 124
Query: 119 tatgaaacggaggaagta 136
||||||||||||| ||||
Sbjct: 125 tatgaaacggagggagta 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||||||||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||| ||||| ||||||| ||||||||||||||
Sbjct: 143 atactccctccgtttcataatgtaaaactttttagcattgcccacattcatata 90
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
|||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 51 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| ||||||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatata 33
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| ||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 110/132 (83%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
||||| ||||| |||||| | |||| | ||||||||||||| | ||||||||| |||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattacctatattcatatatatg-- 61
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
|||||||||||| |||| |||||||||||| |||||||||||| |||| | ||||||
Sbjct: 62 -tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaa 120
Query: 125 acggaggaagta 136
| ||||||||||
Sbjct: 121 atggaggaagta 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||| | || |||||||||| |||| | ||||||||||||| ||||
Sbjct: 62 acatatatatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| ||| ||||||||| |||| ||||||||||| ||||||||||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 131 gaagta 136
||||||
Sbjct: 109 gaagta 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 87 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatata 62
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 4 gatactacctccctttcatgttataagactttctagcattacccacattcat 55
|||||| ||||| |||||| ||||||||||||||| |||| |||||||||||
Sbjct: 3 gatactccctccgtttcatattataagactttctaacattgcccacattcat 54
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||||||||| ||||||| ||||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtga 145
Query: 124 aacggaggaagtaa 137
|||||||| |||||
Sbjct: 146 aacggagggagtaa 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||| ||||||| |||| ||||||||| |||||| | ||||||| ||||| | | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||||||||||| ||| ||||||||||||||
Sbjct: 137 taagactttctagtattgcccacattcatata 106
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 87 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| ||| ||||||||||||| |||| ||||||| ||||||| ||||||||||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacggag 11
Query: 131 gaagta 136
| ||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
|||| ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcatactataagactttctagtattgtccacattcatataaatgct 63
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcat 55
|||| ||||| |||||| |||||||||||||||||||| |||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcat 65
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| |||| |||||| ||||||||||||||||||| ||||| | ||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 127 ggaggaagta 136
||||| ||||
Sbjct: 138 ggagggagta 147
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||||| ||||||||||||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||| |||||||||||||||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtga 18
Query: 124 aacggaggaagtaa 137
||||||||||||||
Sbjct: 17 aacggaggaagtaa 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| ||||| | ||||||||| ||||||| ||||| | | |||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||| ||||||||| |||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 77 tgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatga 18
Query: 124 aacggaggaa 133
||||||||||
Sbjct: 17 aacggaggaa 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 11 cctccctttcatgttataagactttctagcattacccacattcatata 58
||||| |||||| |||||| | |||||||||| ||||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatata 57
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| || |||| ||||||||||||| |||||| |||||| | ||||||
Sbjct: 87 ctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaac 146
Query: 127 ggaggaagta 136
||||| ||||
Sbjct: 147 ggagggagta 156
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||| ||||||||||||||||||| ||||| | | |||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 128 gaggaagta 136
|||||||||
Sbjct: 13 gaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| || |||||| |||||||||||||||| ||||| | | |||
Sbjct: 86 tgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatg 62
||||||||||||||||| ||||||| ||||||||||
Sbjct: 26 taagactttctagcattgcccacatacatataaatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgct 64
||||||||||||||||| |||| |||||| || |||||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgct 100
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
|||||||||||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 53 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| ||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatata 82
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| |||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatata 33
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
||||||||||| || |||| ||||||||||||| |||||||||||| ||||| | |||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 124 aacggagg 131
||||||||
Sbjct: 96 aacggagg 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||||||||||||||| |||||||||||||
Sbjct: 87 taagactttctagcattgtccacattcatata 56
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 79.8 bits (40), Expect = 9e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 93 gtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccac 49
|||| ||||| |||||| |||||||||||||||||||| |||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
||||| |||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||
Sbjct: 75 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 16
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||| ||| ||| ||||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| ||||||||||||||| ||| |||| |||||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatata 57
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/115 (83%), Gaps = 5/115 (4%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgc-----tgtctagattcatttaca 81
||||||||| |||||||| ||| ||||||||| ||| |||||||||| ||| |||
Sbjct: 26 taagactttttagcattatccatattcatatagatgtatgtgtgtctagatttattaaca 85
Query: 82 tatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
| ||||||||||||| |||||||||||| ||||| | | ||||||||||| ||||
Sbjct: 86 tctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggagta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||||||||||||||| |||||||||||||
Sbjct: 119 taagactttctagcattgtccacattcatata 88
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 108/131 (82%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgctg 65
|||| ||||| |||||| | ||||||||||||||||| ||||||||||||| |
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatatg-----tt 76
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||| |||||||||||||||||||| ||||| | |||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 126 cggaggaagta 136
| |||| ||||
Sbjct: 15 ctgagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaaca 139
||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagtaaca 133
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
||||| |||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||
Sbjct: 88 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 147
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 148 cggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||| ||| ||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| ||||||||||||||| ||| |||| |||||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatata 106
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 77.8 bits (39), Expect = 4e-14
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| ||||||||||||| | |||||||||||||| | ||| |||||||||
Sbjct: 33 ttctagcatttcccacattcatattatatatgtctagattcattaatataaatatgaatg 92
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 93 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||| ||||| ||||||||||||| ||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 128 gaggaagtaa 137
||||||||||
Sbjct: 150 gaggaagtaa 159
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||| ||||||| |||| || |||||||| |||||| || ||| ||||| | | | |
Sbjct: 77 tgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaa 18
Query: 124 aacggaggaagtaa 137
||||||||||||||
Sbjct: 17 aacggaggaagtaa 4
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||| |||||||| ||||||| ||||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtga 145
Query: 124 aacggaggaagtaa 137
|||||||| |||||
Sbjct: 146 aacggagggagtaa 159
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||| ||||||| |||| ||||||||| |||||| | ||||||| ||||| | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| || ||||||||||| ||||||||||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtga 18
Query: 124 aacggaggaagtaa 137
||||||||||||||
Sbjct: 17 aacggaggaagtaa 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcat 55
|||||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattacccacattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||| || ||| |||||||||||| ||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 50 ctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttat 116
||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| ||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatata 82
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 26 ataagactttctagcattacccacattcatata 58
|||||||||||||||||| |||| |||||||||
Sbjct: 1 ataagactttctagcattgcccatattcatata 33
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||| ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagtaa 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataa 59
|||| ||||| |||||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatataa 61
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 57 tatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatata 58
|||| ||||| |||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatata 57
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||||||| ||||||||||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcat 55
|||||||||||||||||| ||||||||||
Sbjct: 26 taagactttctagcattatccacattcat 54
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||| |||||||||||| ||| ||||| | | |||
Sbjct: 86 tgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 146 aacggaggaagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| || | |||||| || || ||||||||||||| ||||| | | |||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| ||||||||||||||||||| |||||| ||||| | | |||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||| ||||||| ||| ||||| | ||||||||||||||||||
Sbjct: 57 tatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 6 tactacctccctttcatgttataagactttctagcattacccacattcatataaatgct 64
|||| ||||| |||||| | ||||||||| |||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgct 64
|||||||||||| |||| |||||||||||||| |||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgct 100
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||| ||||||| ||||||||||| ||||||| | |||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 128 gagggagta 136
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 25 tataagactttctagcattacccacattcatata 58
||||||||||||||||||||||||||| ||||||
Sbjct: 117 tataagactttctagcattacccacatacatata 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 90 aatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||| |||||| | ||| ||||||| | ||||||||||||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctag 106
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 50 tctagattcattaacatatatatgaatgtgggcaatgctag 90
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatg 102
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 43 tgtctagattcattaacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||| ||||||| ||||||||||| ||||||| | |||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 13 gagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 25 tataagactttctagcattacccacattcatata 58
||||||||||||||||||||||||||| ||||||
Sbjct: 24 tataagactttctagcattacccacatacatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 90 aatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||| |||||| | ||| ||||||| | ||||||||||||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||| |||||||||| || ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||| ||||||||||||||| || ||| ||||| | | |||||
Sbjct: 88 tctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaa 147
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| || ||||||||||| ||||||||||| |||| | |||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 128 gaggaagta 136
|||||||||
Sbjct: 13 gaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 28 aagactttctagcattacccacattcat 55
||||||||||||||||||||||||||||
Sbjct: 27 aagactttctagcattacccacattcat 54
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| || |||||||||||||| |||| ||| ||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| | |||| ||||||| | ||||| ||| ||||||| | |||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 146 gagggagta 154
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatctta 115
||||||||||||||| ||| ||||||||||||||||||| |||||| |||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatctta 115
||||||||||| |||| ||||||||||||||||||||||||| |||||
Sbjct: 53 ctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatat 57
||||||||||||||||| |||||||||||||
Sbjct: 5 taagactttctagcattgcccacattcatat 35
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgc 63
|||||||||||| |||| |||||||||||||| ||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgc 80
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 25 tataagactttctagcattacccacattcatataaatgctgtctagattcatttacatat 84
|||||| | |||||||||| |||||||||||| ||| | |||||||||||| ||||
Sbjct: 24 tataagtcattctagcattttccacattcatattgatgttatctagattcattaacatca 83
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||| ||||| |||||| | ||||||||||| ||||
Sbjct: 84 atatgaatgtgggaaatgttagaatgacttatattgtgaaacggagggagta 135
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
|||||||||||| |||||||||| |||||| | |||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||| ||||||| |||| |||||| |||||||||||||||||| |||| | |||||||
Sbjct: 75 tctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||| |||| |||||||||| |||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | |||| | ||||||||||||||| |||||||||
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatata 106
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 82 tatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||| ||| |||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 51 tatatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 97 gcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 25 tataagactttctagcattacccacattcatata 58
||||||||||||||||||| ||| |||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatata 53
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||||| ||||||||||||| ||||||| || |||||| | |||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||| ||| |||| ||||||||||||| |||||||||||| ||||| | |||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 126 cggaggaagta 136
||||| ||||
Sbjct: 15 tggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 5 atactacctccctttcatgttataagactttctagcattacccacattcatata 58
||||| ||||| |||||| | ||||||||||||||||| |||||||||||||
Sbjct: 4 atactccctccatttcataatgtaagactttctagcattgtccacattcatata 57
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 96 ggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 74/88 (84%), Gaps = 7/88 (7%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgctgtctagattcatttacatatat 86
|||||||||| |||||| ||||||||||||| ||||||||||||| || | |||
Sbjct: 81 taagactttccagcattgcccacattcatat-------gtctagattcattaacttctat 29
Query: 87 atgaatgtgggcaatgctagaaaatctt 114
||||||||||||||||| |||||||||
Sbjct: 28 gtgaatgtgggcaatgctggaaaatctt 1
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatctt 114
|||||||||||||| || | ||| ||||||||||||||||| |||| ||||
Sbjct: 91 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatctta 115
|||||||||||||||||||| |||| |||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||
Sbjct: 57 tatatgaatatgggcaatgctagaaagtcttacattatgaaacggagaaagtaa 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgctg 65
||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 26 taagactttctagcattgcccatattcatatagatgctg 64
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 63 ctgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatg 122
||||||||||||||| |||| ||||||||||||| |||||||||| |||| | ||||
Sbjct: 79 ctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatg 138
Query: 123 aaacggaggaagta 136
||||||||| ||||
Sbjct: 139 aaacggagggagta 152
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||| ||||| |||| | | |||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
||||||||| |||| |||| ||||||||||||| |||||||||| |||| | |||||
Sbjct: 57 tgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatga 116
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 117 aacggaggaagta 129
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/103 (83%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| ||||||||||||| || | |||||||||||| ||| |||||||||
Sbjct: 33 ttctagcatttcccacattcatat---tgatatctagattcattagcattaatatgaatg 89
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||| |||||| | ||||||||||| ||||
Sbjct: 90 tgggaaatgctagaatgacttatattgtgaaacggagggagta 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 25 tataagactttctagcattacccacattcatataaatgct 64
|||||| | |||||||||| ||||||||||||| ||||||
Sbjct: 113 tataagtcattctagcatttcccacattcatattaatgct 74
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||| || |||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||| ||||||| |||| ||||| |||||||||||||||||| |||| | |||||||
Sbjct: 88 tctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaa 147
Query: 126 cggaggaagtaa 137
||||||||||||
Sbjct: 148 cggaggaagtaa 159
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||||||||| |||| | | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 65/75 (86%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
||||||||||||||| || |||||| | ||||||||||||| |||| |||||| |||
Sbjct: 33 ttctagcattacccatatgcatata---gacgtctagattcattaacatctatatgcatg 89
Query: 94 tgggcaatgctagaa 108
|||||||||||||||
Sbjct: 90 tgggcaatgctagaa 104
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||||| |||||||||| |||| | | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 121
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||| |||||||| ||||| | | ||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||||||||||||||||| ||||| | | ||||||||||| ||||
Sbjct: 68 tatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgct 64
||||| ||||||||||| |||||||||||||| |||||
Sbjct: 99 taagagtttctagcattgcccacattcatatagatgct 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||| || ||||||||||||||
Sbjct: 26 taagactttctagcgttgcccacattcatata 57
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/103 (83%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| ||||||||||||| || | |||||||||||| ||| |||||||||
Sbjct: 104 ttctagcatttcccacattcatat---tgatatctagattcattagcattaatatgaatg 48
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| |||||||||| |||||| | ||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 25 tataagactttctagcattacccacattcatataaatgct 64
|||||| | |||||||||| ||||||||||||| ||||||
Sbjct: 24 tataagtcattctagcatttcccacattcatattaatgct 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/103 (83%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| |||||||||||| || ||| |||||||||| |||| |||||||||
Sbjct: 33 ttctagcattttccacattcatat---tgatgtttagattcattaacatcaatatgaatg 89
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| ||||||||| |||||| | ||||||||||||||||
Sbjct: 90 tgggatatgctagaatgacttatattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||| | ||||||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||| ||| |||||||| |||| | |||||||
Sbjct: 88 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 147
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||| ||| |||| || ||| ||||||||||||||||||| ||||| | | |||
Sbjct: 86 tgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| || ||||||| || ||| ||| ||| ||||| | | |||||||
Sbjct: 73 tagattcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacg 14
Query: 128 gaggaagtaa 137
||||||||||
Sbjct: 13 gaggaagtaa 4
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||| |||| ||||| |||||| |||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatga 126
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 127 aacggaggaagta 139
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaa 109
|||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaaa 4
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaa 109
|||||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaaa 109
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 30 gactttctagcattacccacattcatat 57
|||||||||||||| |||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatat 28
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||||||||||| ||||| | | ||||||||| ||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacggatgaagta 126
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatat 57
||||||||||||||||| |||||||||||||
Sbjct: 105 taagactttctagcattgcccacattcatat 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 98 caatgctagaaaatcttataatatgaaacggaggaagtaa 137
|||||||||||| ||||| | ||||||| |||||||||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggaggaagtaa 4
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
||||||||||| || |||| ||||||||| ||| ||||||||||| ||||| | |||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 124 aacggagg 131
||||||||
Sbjct: 17 aacggagg 10
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||||||| ||| |||||||||
Sbjct: 26 taagactttctagcattaaccatattcatata 57
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/86 (83%), Gaps = 7/86 (8%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgctgtctagattcatttacatatat 86
|||||||||| |||||| ||||||||||||| ||||||||||||| || | |||
Sbjct: 59 taagactttccagcattgcccacattcatat-------gtctagattcattaacttctat 111
Query: 87 atgaatgtgggcaatgctagaaaatc 112
||||||||||||||||| |||||||
Sbjct: 112 gtgaatgtgggcaatgctggaaaatc 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaa 109
|||||||||||||| || | ||| ||||||||||||||||| ||||
Sbjct: 49 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatctta 115
|||||||||||||||||||| |||| |||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 5e-10
Identities = 89/108 (82%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgct-----gtctagattcatttacatatatat 88
|||||||||| ||||||||||||| |||| | || |||||||||| |||| ||||
Sbjct: 33 ttctagcatttcccacattcatattaatgttaatatgtatagattcattaacatcaatat 92
Query: 89 gaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||| |||||||||| |||||| | ||||||||||| ||||
Sbjct: 93 gaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatctta 115
|||||||||||||| |||| |||||||||||||| |||||||||| |||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatctta 115
||||||||||||||||||| |||||||||||| | |||||||||| |||||
Sbjct: 62 tgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||||| |||||||||||||||
Sbjct: 2 taagactttctagcatcacccacattcatata 33
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||||| || ||||||||||||
Sbjct: 113 taagactttctagcatcacacacattcatata 82
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| |||| ||||||||||||| |||||||||| |||| | | ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 127 ggaggaagtaa 137
|||||||||||
Sbjct: 14 ggaggaagtaa 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 89 tagattcattaacatcaatatgaatgtgggaaatgctagaa 129
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||| ||| |||||||| |||| | |||||||
Sbjct: 75 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||| | ||||||||||||| |||| | |||||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| | || ||||||||||||||||| |||||||| ||||| | | |||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 131 gaagtaa 137
|||||||
Sbjct: 109 gaagtaa 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
|||||||||||||| || ||||||||||||||
Sbjct: 93 taagactttctagcgttgcccacattcatata 62
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| | || ||||||||||||| |||||||||| |||| | |||||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 105 cggaggaagta 115
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||||| |||||||||| |||| | | |||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 147
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||| |||| |||||||||| |||| | |||||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 130 cggaggaagta 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| |||||||| |||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaa 33
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||||| ||||||| || |||||| | |||||
Sbjct: 88 tctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 147
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 148 cggaggaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgcta 105
|||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggtaatgcta 36
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||| | |||||||||| |||||| | |||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 117 cggaggaagta 127
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| || ||||||||||| ||||||||||| ||||| | | ||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 128 gaggaagtaa 137
|||| |||||
Sbjct: 13 gagggagtaa 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcat 55
|||||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattacccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 81 atatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaac 138
||||||||| ||||| ||||||||| ||| ||||| | | ||||||||||| ||||||
Sbjct: 105 atatatatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagtaac 162
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| ||||| ||||||||||| | ||||||||||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtgagaaatgctagaa 110
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||| |||||||||| |||| | |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 128 gaggaagta 136
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgctgtctagattcatttacatatatatgaatg 93
|||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||
Sbjct: 33 ttctagcatttctcacattcatattgatgctaatgagattcattagcatcaatatgaatg 92
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagtaac 138
|| | |||||||||| |||||| | ||||||||||||||||||
Sbjct: 93 tgagaaatgctagaatgacttatattgtgaaacggaggaagtaac 137
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 58.0 bits (29), Expect = 3e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||| | |||| || |||||||||| |||||||||||| ||||| | | |||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 128 gaggaagta 136
|||||||||
Sbjct: 131 gaggaagta 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 78 tacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||| |||| | |||||| |||||||||||| |||| | | ||||||||||||||||
Sbjct: 63 tacatctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||| |||||||||| |||| | |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 128 gaggaagta 136
|||||||||
Sbjct: 13 gaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
||||||| |||||| |||| ||||||||||||| ||||||||||
Sbjct: 74 tgtctagtttcattaacatcaatatgaatgtgggaaatgctagaa 118
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| ||| |||||||||||||||||||||| || |||| | |||||||||
Sbjct: 90 tagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacg 149
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||| || |||| || ||||||| |||| | |||||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 86 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 60 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||| | ||| |||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||| |||||||| |||||||||| |||| | | |||
Sbjct: 77 tgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaa 108
||||||| |||| ||||||||||||| ||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaa 120
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 84 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 128
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 51 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 88/108 (81%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatgct-----gtctagattcatttacatatatat 88
|||||||||| ||||||||||||| |||| | || |||||||||| |||| ||||
Sbjct: 33 ttctagcatttcccacattcatattaatgttaatatgtatagattcattaacatcaatat 92
Query: 89 gaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||| |||||||||| |||||| | ||||||||||| ||||
Sbjct: 93 gaatgtggaaaatgctagaatgacttatattgtgaaacggagggagta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 70 gattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacgga 129
|||||||| |||| ||||||||||||| |||||||||| |||| | | |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 130 ggaagtaa 137
||||||||
Sbjct: 11 ggaagtaa 4
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 63 ctgtctagattcatttacatatatatgaatgtgggcaatgctag 106
||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 45 ctgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatg 102
|||||||||||||| |||| ||||||||||||| ||||
Sbjct: 43 tgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
||||||||||||| | ||| |||||||||||| |||||||||| |||| | | ||||
Sbjct: 76 gtctagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 125 acggaggaagta 136
||||||||||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||| |||||| ||||| |||||| ||||| | |||||||
Sbjct: 73 tctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| | || || || ||||||| |||||||| ||| ||||| | | |||||
Sbjct: 86 tctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaa 145
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 146 cggaggaagta 156
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||||| |||||||||| |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 126 cggaggaagtaa 137
|||||| |||||
Sbjct: 15 cggagggagtaa 4
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| ||||| | | ||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 50.1 bits (25), Expect = 8e-06
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatataaatgctgtctagattcatt 77
|||||| |||||||||| ||||||||||||| || ||||||||||||||
Sbjct: 111 taagacattctagcatttcccacattcatat---tgatgtctagattcatt 64
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 91/112 (81%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 25 tataagactttctagcattacccacattcatataaatgctgtctagattcatttacatat 84
|||||| | |||||||||| ||||||||||||| || |||||||||||| ||||
Sbjct: 24 tataagtcattctagcatttcccacattcatat-----ctatctagattcattaacatca 78
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||| |||| ||||| |||| | ||||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgatagaatggcttacattatgaaacggaggaagta 130
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||||||||||| |||||||||| |||||| | ||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| | || ||||||||||||| |||||||||| |||||| | |||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 147
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 148 cggagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||||| || | ||||| |||||| | |||||
Sbjct: 75 tctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||||| || |||||||||| |||| | |||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 113 cggagggagta 123
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 98 caatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||| || |||||||||||||||||||||| ||||
Sbjct: 33 caatgctaaaagatcttataatatgaaacggagggagta 71
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 tcttataatatgaaacggaggaagta 136
||||||||||||||||||||| ||||
Sbjct: 30 tcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| || ||||||||||||| | |||||||||| |||| | | |||||
Sbjct: 88 tctagattcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| || | ||||||||||||| |||||||||| |||| | | |||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaaca 139
||||||||||||| |||||||||| |||| | ||||||||||||| |||||||
Sbjct: 87 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtaaca 141
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaaca 139
||||||||||||| ||| |||||| |||||| | |||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagtaaca 2
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
||||||||||||| |||| |||||||||||| |||||||||| |||| | | ||||
Sbjct: 87 gtctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaa 146
Query: 125 acggaggaagtaaca 139
||||||| |||||||
Sbjct: 147 acggagggagtaaca 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaa 108
||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 74 ctagattcattagcatctatatgaatgtggacaatgctagaa 33
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||| ||||||||| |||| |||| || ||||| |||||||||| |||||| | |||
Sbjct: 84 tgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtga 143
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 144 aacggaggaagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||| ||||||||||||| |||||||||| |||| | | |||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| |||||||||| || |||||||||| |||||| | |||
Sbjct: 80 tgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtga 139
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 140 aacggagggagta 152
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 87 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||||||||| ||| ||||| | ||| ||||||| ||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||| ||| |||| || ||||||||| ||||| |||||| ||||||| | |||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 128 gaggaagta 136
|||| ||||
Sbjct: 116 gagggagta 124
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| ||||||||||||| |||||||||| |||| | | |||
Sbjct: 86 tgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtga 145
Query: 124 aacggaggaagtaa 137
|||||||| |||||
Sbjct: 146 aacggagggagtaa 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| ||| |||||||||||||| |||| |||||
Sbjct: 75 tctagattcattaacacctatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 83 atatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| | |||||||||| | |||| | | ||||||||||||||||
Sbjct: 58 atatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| |||| |||||||| |||| |||||||||| |||| | | ||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 127 ggaggaagta 136
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| ||||||||||| | |||||||||| |||| | | |||
Sbjct: 86 tgtctagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtga 145
Query: 124 aacggaggaagtaa 137
|||||||| |||||
Sbjct: 146 aacggagggagtaa 159
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 88 tgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
|||||||||| |||||||||| | |||||| | ||||||||||| |||||
Sbjct: 53 tgaatgtgggaaatgctagaataacttatattgtgaaacggagggagtaa 4
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||| |||| ||||||| || |||||| | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtga 136
Query: 124 aacggaggaagtaa 137
|||||||| |||||
Sbjct: 137 aacggagggagtaa 150
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| |||||||| |||| ||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 111
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 87 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||| |||| |||||||||| |||| | ||||||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||||||||||| |||||||||| |||| | | |||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||| ||||||| |||| |||||||||||| ||||| |||| |||||| | |||
Sbjct: 77 tgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 8e-06
Identities = 84/103 (81%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 37 tagcattacccacattcatataaatg---ctgtctagattcatttacatatatatgaatg 93
||||||| ||||||||||||| ||| || |||||||||||| ||| ||||||||
Sbjct: 107 tagcatttcccacattcatattgatgtcactatctagattcattagcatcagtatgaatg 48
Query: 94 tgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||| |||||||||| |||||| |||||||| |||||||||
Sbjct: 47 tggaaaatgctagaatgacttatattatgaaacagaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| | || ||||||||||||| ||| |||||| ||||| | | |||
Sbjct: 86 tgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtga 145
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
||||| |||||||| |||| || ||||||||||| ||||||| || |||| | | |||
Sbjct: 77 tgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtga 18
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 100 atgctagaaaatcttataatatgaaacggaggaagta 136
|||||| ||||||||| | ||||||||||||||||||
Sbjct: 77 atgctaaaaaatcttacattatgaaacggaggaagta 113
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 86 tgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| |||||||||||| |||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||| || |||| ||||||||||||| |||||||||| |||| | | |||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 124 aacggaggaagta 136
|||||||||||||
Sbjct: 132 aacggaggaagta 144
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| |||||||| |||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 87 atgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||| |||| |||||||||| |||| | ||||||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 84 tatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||| | ||||||||||| |||| | ||||||||||||||||||
Sbjct: 84 tatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 88 tgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 87 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| ||| |||||||||||| |||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 90 tgtctagattcattaacatcactatgaatgtgggaaatgctagaa 134
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||||||| | |||| || || |||| ||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaa 108
||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||||| |||| |||||||| || | |||||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatga 18
Query: 124 aacggaggaagta 136
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 47 tgtctagattcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| ||| |||||||||||||| |||| |||||
Sbjct: 58 tctagattcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcactatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 8e-06
Identities = 86/105 (81%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 34 ttctagcattacccacattcatataaatg-ctgtctagattcatttacatatatatgaat 92
|||||||||| |||| |||||||| || || |||||||||||| |||| ||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatatctatctagattcattaacatcaatatgaat 92
Query: 93 gtgggcaatgctagaaaatcttataatatgaaacggaggaagtaa 137
||||| |||| ||||| |||| | | ||||||||||| |||||
Sbjct: 93 gtgggaaatgttagaatgacttacattgtgaaacggagggagtaa 137
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 86 tgtctagattcattaacattaatatgaatgtggagaatgctagaa 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||| ||||||||||||| ||||||| || |||| | | |||||
Sbjct: 75 tctagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 65 gtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaa 124
||||||||||||| |||| |||||||| ||| |||||||||| |||| | | ||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 125 acggaggaagtaacat 140
||||||| ||||||||
Sbjct: 134 acggagggagtaacat 149
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||||||| | || | ||||||||||||| |||||||||| |||| | |||||
Sbjct: 86 tgtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatga 145
Query: 124 aacggagg 131
||||||||
Sbjct: 146 aacggagg 153
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||| | || |||||||||| |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 126 cggaggaagtaa 137
||||||||||||
Sbjct: 15 cggaggaagtaa 4
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||| | |||||||||| |||||| | ||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
||||||||||||| |||||||||| |||||| | ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatataaatg-ctgtctagattcatttacatatatatgaat 92
|||||||||| |||| |||||||| || || |||||||||||| |||| ||||||||
Sbjct: 109 ttctagcatttcccatattcatattgatatctatctagattcattaacatcaatatgaat 50
Query: 93 gtgggcaatgctaga 107
||||| |||| ||||
Sbjct: 49 gtgggaaatgttaga 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagtaaca 139
|||||||| |||| |||||||||| |||| | | |||||||||||||||||||
Sbjct: 86 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaaca 140
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| | || ||||||||||||| ||||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| ||| ||||||||||||| ||||||| || |||| | | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 127 ggaggaagtaa 137
|||||||||||
Sbjct: 14 ggaggaagtaa 4
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||||| |||| || || |||| | |||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacaacaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
||||||| |||| |||| ||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
||||||| |||| |||| ||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| ||| ||||||||||||| ||||||| || |||| | | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 127 ggaggaagtaa 137
|||||||||||
Sbjct: 134 ggaggaagtaa 144
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||||||||||| |||| || || |||| | |||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 126 cggaggaagta 136
|||||| ||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatataaatgct 64
|||||||||| |||||||||||| |||||||
Sbjct: 67 ttctagcatttcccacattcatagaaatgct 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 86 tatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||||||||||| |||||||||| |||| | | ||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 70 gattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacgga 129
|||||||| |||| ||||||||||||| ||||||| || |||| | | |||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 130 ggaagta 136
|||||||
Sbjct: 128 ggaagta 134
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| ||||| |||||| |||||||||| |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| |||| |||||||| ||| |||||||||| |||| | | |||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 126 cggaggaagta 136
|||||||||||
Sbjct: 124 cggaggaagta 134
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| |||| |||||| || || ||||||||| || ||||| | | ||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 131 gaagta 136
||||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| |||| |||||||||| || |||||||||| |||| | | ||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 131 gaagta 136
||||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| |||| |||||| || || ||||||||| || ||||| | | ||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 131 gaagta 136
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 79 acatatatatgaatgtgggcaatgctagaa 108
||||||||||||||| ||| ||||||||||
Sbjct: 62 acatatatatgaatgcgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 99 aatgctagaaaatcttataatatgaaacggaggaagta 136
|||||| |||| ||||||| ||||||||||||| ||||
Sbjct: 93 aatgcttgaaagtcttatagtatgaaacggagggagta 130
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 54 atataaatgctgtctagattcatttacatatatatgaatgtg 95
|||| |||| |||||||||||||| |||| |||||||||||
Sbjct: 65 atattaatgttgtctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| |||| |||||||||||| ||| ||| || |||||| | |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 128 gaggaagtaa 137
||||||||||
Sbjct: 122 gaggaagtaa 131
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 79 acatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggaggaagta 136
|||| ||||||||| || ||||||||||||| ||||| | | | ||||||||| ||||
Sbjct: 51 acatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
