miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 301 bits (152), Expect = 3e-81
Identities = 216/239 (90%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| |||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcatt 61
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 121
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||| |||||||||||| ||||| ||||||||| ||
Sbjct: 122 aaatatactttcatgtacatatatagttttacatattttataaatttttttaataagtcg 181
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagagagta 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||||||||||||||||||||||||||||||||||| | || ||||||||| ||
Sbjct: 240 tactctctccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttgaccgtt 182
Query: 69 cgtcttattcaaaaaattta 88
|| |||||| ||||||||||
Sbjct: 181 cgacttattaaaaaaattta 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaatattttaaaacggagggagta 2
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 280 bits (141), Expect = 9e-75
Identities = 200/220 (90%), Gaps = 2/220 (0%)
Strand = Plus / Plus
Query: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaa 89
|||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 25 tttgacaccgatgattttttaagtacgtgtttgaccattcgtcttattcaaaaaatttaa 84
Query: 90 gtaattatttattcttttcata-catttgattcattgttaaatatactttcatgtacaca 148
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 85 ttaattatttattcttttcatatcatttgattcattgttaaatatactttcatgtacaca 144
Query: 149 tatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaa 207
||||||||||| |||||| ||| ||||||||||||||| ||||||||| |||
Sbjct: 145 tatagttttacatatttcataattttttttgaataagacgaacggtcaaacatgtgttaa 204
Query: 208 aaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||| |||||||| |||||||||||||||
Sbjct: 205 aaagtcaacggtgtcgaacattttgaaacggagggagtat 244
Score = 97.6 bits (49), Expect = 7e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||| ||||||||||||||||| || || ||||||||| |
Sbjct: 244 atactccctccgtttcaaaatgttcgacaccgttgacttttt-aacacatgtttgaccgt 186
Query: 68 tcgtcttattcaaaaaa 84
|||||||||||||||||
Sbjct: 185 tcgtcttattcaaaaaa 169
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 278 bits (140), Expect = 4e-74
Identities = 214/239 (89%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttaactttttaa-tacgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 cgttttattcaaatcatttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||| |||||||||||||||||||||||| |||||| || ||||||| |
Sbjct: 121 aaatatattttcatgtacacatatagttttacatatttcacaatttttttgaataagatg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||| ||| |||||||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 181 aacggtcaaatatgtgctaaaaaatcaacggtgtcgaacattttaaaacggaggaagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||| ||||| ||| ||||| || |||||||| |||||||||||||||||| ||||||
Sbjct: 69 aataaaacgaatggtcaaacacgtattaaaaagttaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||| |||||||| ||||||||||| |||||| || | ||||||| ||| ||||
Sbjct: 233 ctccgttttaaaatgttcgacaccgttgattttttagc-acatatttgaccgttcatctt 175
Query: 75 attcaaaaaa 84
||||||||||
Sbjct: 174 attcaaaaaa 165
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 276 bits (139), Expect = 1e-73
Identities = 213/239 (89%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| |||||||||||||||||||||| || || ||||||||||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccatt 61
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgtta 128
|||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattatttttatatatttgatttattgtta 121
Query: 129 aatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacga 188
|||||| ||| |||||||||||||||||||| |||||| |||||||| ||||
Sbjct: 122 aatatattttaatgtacacatatagttttacatatttc-acaaactttttaataaaacga 180
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 181 acggttaaacatgtgttaaaaagttaacggtgtcaaacattttaaaatggagggagtat 239
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaatattttaaaacggagggagta 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaa 51
|||||| |||| ||| |||||||||||||||||| |||||||||
Sbjct: 239 atactccctccattttaaaatgtttgacaccgttaactttttaa 196
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 274 bits (138), Expect = 6e-73
Identities = 205/226 (90%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 18 aaaatgtttgacaccgttgactttttaagtacgtgtttgaacattcgtcttattcaaaaa 77
Query: 84 atttaagtaattatttattcttttcatac-atttgattcattgttaaatatactttcatg 142
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 78 atttaagtaattatttattctttttatacaatttgattcattgttaaatatactttcatg 137
Query: 143 tacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgt 202
||| ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 138 tacgcatatagttttacatatttc-acaaactttttaataagacgaacggttaaacatgt 196
Query: 203 gctaaaaagtcaacggtgtcaaacattt-taaaacggagggagtat 247
||||||||||||||| | ||||| |||| |||||| |||||||||
Sbjct: 197 gctaaaaagtcaacgttatcaaatatttcgaaaacgaagggagtat 242
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacatttt 231
|||||||||||||||||||||||||||
Sbjct: 44 taaaaagtcaacggtgtcaaacatttt 18
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 274 bits (138), Expect = 6e-73
Identities = 204/226 (90%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||| |||| ||||||||||||||||| ||||| |||||||||
Sbjct: 1 atactccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccat 60
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 61 tcgtcttatttaaaaaatttaagtaattatttattcttttcatatcatttaattcattgt 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 121 taaatatactttcatgtacacatatagttttacatatttc-acaatttttttaataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttta 232
|| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttta 225
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||||||||||||||||||||||||| | || |||||||||||| |||||||| |||||
Sbjct: 224 aaaatgtttgacaccgttgacttttt-agcacatgtttgaccatttgtcttattaaaaaa 166
Query: 84 att 86
|||
Sbjct: 165 att 163
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 43 taaaaagtcaacggtgccaaatgttttgaaacggagggagtat 1
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 274 bits (138), Expect = 6e-73
Identities = 194/213 (91%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 21 ttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaa 80
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 13 ttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttatttaa 72
Query: 81 aaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactttc 139
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 73 aaaatttaattaattatttattcttttcatatcatttgattcattgttaaatatattttc 132
Query: 140 atgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggttaaac 198
|| ||||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 133 atatacacatatagttttacatatttcacaaaaaaaattgaataagacgaacggttaaac 192
Query: 199 atgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||||||| |||||||||||||||||||||
Sbjct: 193 atgtgctaaaatgtcaacggtgtcaaacatttt 225
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 231
||||||||||| ||| ||||| || || ||||||||||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 16
Score = 58.0 bits (29), Expect = 6e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||||||||||||||||||| |||| | || ||||| ||| |||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgacatttt-agcacatgtttaaccgttcgtcttattca 171
Query: 80 a 80
|
Sbjct: 170 a 170
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 258 bits (130), Expect = 3e-68
Identities = 207/233 (88%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgactttttagc-acgtgtttgaccattcgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcat-acatttgattcattgttaaatata 134
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 68 ttcaaaaaatttaagtaattatttattcttttcatctcatctgattcattgttaaatata 127
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtt 194
|||||||||||||||||||||||| |||||| || | ||||| ||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcacaatttttttaactaagatgaatggtc 187
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||| ||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 188 aaacatatgctaaaaagtcaacggcgtcaaacattttgaaacggagggagtat 240
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaatattttgaaacgg 10
Query: 239 a 239
|
Sbjct: 9 a 9
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgacgccgttgacttttta 198
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 256 bits (129), Expect = 1e-67
Identities = 193/213 (90%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaa 89
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 23 tttgacaccgttgactttttaa-tacgtgtttgaccattcgtcttatttaaaaaatttaa 81
Query: 90 gtaattatttattcttttcata-catttgattcattgttaaatatactttcatgtacaca 148
||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 82 ataattatttatcctcttcatatcatttgattcattgttaaatatactttcatgtacaca 141
Query: 149 tatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaa 208
||||||||||| |||||| |||||||||| || |||| ||||||||||||||
Sbjct: 142 tatagttttacatatttc-acaatttttttaataagatgagcggtcaaacatgtgctaaa 200
Query: 209 aagtcaacggtgtcaaacattttaaaacggagg 241
||||||||||||||||||||||| |||||||||
Sbjct: 201 aagtcaacggtgtcaaacattttgaaacggagg 233
Score = 71.9 bits (36), Expect = 4e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||||||||||||||||||||||||||||||
Sbjct: 232 ctccgtttcaaaatgtttgacaccgttgacttttta 197
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 225
||||||||||| ||| ||||| || |||||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacacgtattaaaaagtcaacggtgtcaaa 23
>RF01058;MIR806;AP008217.1/20608272-20608042 39947:Oryza sativa
Japonica Group
Length = 231
Score = 256 bits (129), Expect = 1e-67
Identities = 197/220 (89%), Gaps = 2/220 (0%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ccgttttaaaatatttgacaccgttgactttttag-tacgtgtttgaccattcgtcttat 59
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 60 taaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatac 119
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtta 195
||||||||| ||||||| |||||| ||||| |||||||||||||| ||| |
Sbjct: 120 tttcatgtatacatataattttacatattttataattttttttaataagacgaatggtca 179
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||| |||||| ||||||||||||||||||||||||
Sbjct: 180 aacatgtgttaaaaattcaacggtgtcaaacattttaaaa 219
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| ||||| || |||||||||||||||||||||| |||||||||
Sbjct: 63 tttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaatattttaaaa 4
Query: 236 cgg 238
|||
Sbjct: 3 cgg 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 215 aaaatgtttgacaccgttgaatttttaac-acatgtttgaccattcgtcttattaaaaaa 157
Query: 84 a 84
|
Sbjct: 156 a 156
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 256 bits (129), Expect = 1e-67
Identities = 214/241 (88%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacatcgttgactttttaa-tatatgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 60 ttgtcttatttaaaaaatttaagtaattatttattcttttcatatcattttattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||| |||||||| || ||||||||||||||||| |||||| |||||| ||||
Sbjct: 120 taattatacttttatatacacatatagttttacatatttc-acaatttttttaatgagac 178
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||
Sbjct: 179 gaacggttaaacatgtgctaaaaagtcaacggtgttaaatattttgaaacggaggtagta 238
Query: 247 t 247
|
Sbjct: 239 t 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
|||||||| || ||| |||||| | ||||||||||||| ||||||||||||| ||||||
Sbjct: 69 aataagacaaatggtcaaacatatattaaaaagtcaacgatgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||||| ||| |||||||||||||||||
Sbjct: 232 ctccgtttcaaaatatttaacaccgttgacttttta 197
>RF01058;MIR806;AAAA02006511.1/7100-6860 39946:Oryza sativa Indica
Group
Length = 241
Score = 252 bits (127), Expect = 2e-66
Identities = 215/242 (88%), Gaps = 5/242 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||| |||
Sbjct: 1 atactcgctccgtttcaaaatgtttggcaccgttggctttttag-tacgtgtttgatcat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 60 tcgtcttattcaaaaattttaagtaattatttattcttttcatatcatttgatttattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 120 taaatatactttcatgtacacatatagttttacatatttc-acaatttttttaataagac 178
Query: 187 gaacggttaaacatgtgc--taaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|||||||||||||||| | |||||| |||| ||| | |||||||||||||||||| |||
Sbjct: 179 gaacggttaaacatgtactttaaaaaatcaatggtattaaacattttaaaacggagcgag 238
Query: 245 ta 246
||
Sbjct: 239 ta 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| | | ||||| || |||||||| |||||||| |||||||||| ||||||
Sbjct: 69 aataagacgaatgatcaaacacgtactaaaaagccaacggtgccaaacattttgaaacgg 10
Query: 239 agggagtat 247
|| ||||||
Sbjct: 9 agcgagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaa-tacgtgtttgaccat 67
||||| |||||||| ||||||||| | ||| |||| |||||||| ||| ||||| ||| |
Sbjct: 240 tactcgctccgttttaaaatgtttaataccattgattttttaaagtacatgtttaaccgt 181
Query: 68 tcgtcttattcaaaaaatt 86
|||||||||| ||||||||
Sbjct: 180 tcgtcttattaaaaaaatt 162
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 252 bits (127), Expect = 2e-66
Identities = 206/231 (89%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||| |||||||||||||| |||||||| ||| || |||||||||||||||||||||
Sbjct: 9 ccgttttaaaatgtttgacacagttgacttgttag-tatgtgtttgaccattcgtcttat 67
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
|||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 68 ctaaaaaaagtaagtaattatttattctttttatatcatttgattcactgttaaatatac 127
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtta 195
|||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 128 tttcatgtacacatatagttttacacatttc-ataatttttttaataagacgaacggtta 186
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 187 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 237
Score = 83.8 bits (42), Expect = 1e-15
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||||||||||| | || ||||| ||| ||
Sbjct: 237 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttaaccgtt 179
Query: 69 cgtcttattcaaaaaatt 86
||||||||| ||||||||
Sbjct: 178 cgtcttattaaaaaaatt 161
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 180 ataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
|||||||||| ||| ||||| | |||| |||||||| |||||||||||||||||||||
Sbjct: 67 ataagacgaatggtcaaacacatactaacaagtcaactgtgtcaaacattttaaaacgg 9
>RF01058;MIR806;AACV01010775.1/2057-2297 39947:Oryza sativa Japonica
Group
Length = 241
Score = 250 bits (126), Expect = 8e-66
Identities = 202/229 (88%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||||||||||||| |||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 12 gtttcaaaatgttttacaccgttgactttttaaatacgtatttgatcatttgtcttattt 71
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct: 72 aaaaattttaattaattatttattctttttatatcatttgattcattgttaaatatattt 131
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
| |||||||||||||||||||| |||||| ||||||| ||||||| ||||||
Sbjct: 132 ttatgtacacatatagttttacatatttcacaaatttttttaatacgacgaacagttaaa 191
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| ||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 192 catatgctaaaaagttaacggtatcaaatattttaaaacggagggagta 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||||| ||||||||| |||| ||||| ||||
Sbjct: 43 taaaaagtcaacggtgtaaaacattttgaaacagagggggtat 1
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 200/225 (88%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||| ||||| |||| ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 17 aaaatgtttaacaccattga-tttttaagtacgtatttgaccattcgtcttattcaaaaa 75
Query: 84 atttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatg 142
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 76 atttaagtaattatttattcttttcatatcatttgattcattgttaaatatatttttatg 135
Query: 143 tacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgt 202
|||||| |||||||||| |||||| |||||||||||||||||| ||| ||||
Sbjct: 136 tacacacatagttttacatatttcacaaatttttttaataagacgaacggtcaaatatgt 195
Query: 203 gctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 196 gctaaaaagttaacggtgataaatattttaaaacggagggagtat 240
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||| | || || |||| |||| ||||| ||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaatacgtacttaaaaatcaatggtgttaaacattttaaaatgg 10
Query: 239 agggagtat 247
| |||||||
Sbjct: 9 atggagtat 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| ||||| ||| ||||||| |||||||| || | ||||||| |
Sbjct: 240 atactccctccgttttaaaatatttatcaccgttaactttttagc-acatatttgaccgt 182
Query: 68 tcgtcttattcaaaaaattt 87
|||||||||| |||||||||
Sbjct: 181 tcgtcttattaaaaaaattt 162
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 250 bits (126), Expect = 8e-66
Identities = 213/241 (88%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttt-attacgtgtttgactat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgt 126
|||||||||| |||||| ||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 60 tcgtcttatt-aaaaaaattaagtaattatttattcttttcatacaatttaatttattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||||||||||||| |||||| |||||| || ||||||||
Sbjct: 119 taaatatactttcatgtacacatataattttacatatttcacaaattttttgaataagac 178
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| ||| |||| ||||||||| |||||||| ||| ||||||||||||| ||||||
Sbjct: 179 gaacggtcaaatatgtactaaaaagttaacggtgttaaatattttaaaacggatggagta 238
Query: 247 t 247
|
Sbjct: 239 t 239
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| || ||||| || ||||||||||||||||||||||||||| |||
Sbjct: 72 tttaataagacgaatagtcaaacacgtaataaaaagtcaacggtgtcaaacattttgaaa 13
Query: 236 cggagggagtat 247
||||||||||||
Sbjct: 12 cggagggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||| ||||| ||| |||||||| |||||||| ||| | ||||||| |||||||||
Sbjct: 231 tccgttttaaaatatttaacaccgttaactttttag-tacatatttgaccgttcgtctta 173
Query: 76 ttcaaaaaattt 87
||||||||||||
Sbjct: 172 ttcaaaaaattt 161
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 248 bits (125), Expect = 3e-65
Identities = 211/240 (87%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| ||||||||||| ||||| |||||| || || ||||||||||
Sbjct: 1 atactccctccgtttctaaatgtttgacgccgttaactttt-aagcgcgggtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| ||||||||||| |||||||| || ||||||| |||||||||||||||
Sbjct: 60 tcgtcttatttaaaaaatttaactaattattgatgactttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 120 taaatatactttcatgtacacatatagttttacatatttcataaatttttttaataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 180 gaacggtcaaacatgtgctaaaaagttaatggtgtcaaacattttaaaacggagggagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||||||||||||| || ||||||| | || ||||||||| ||
Sbjct: 239 tactccctccgttttaaaatgtttgacaccattaacttttt-agcacatgtttgaccgtt 181
Query: 69 cgtcttattcaaaaaattta 88
||||||||| ||||||||||
Sbjct: 180 cgtcttattaaaaaaattta 161
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| |||| | ||| |||||| ||||| ||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacccgcgcttaaaagttaacggcgtcaaacatttagaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 248 bits (125), Expect = 3e-65
Identities = 200/224 (89%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 13 tttcaaaatgtttgacaccgttcactttttag-tacgtgtttgaccattcgtcttattca 71
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||
Sbjct: 72 acaaatttaagtaattatttattctttt-atatcatttgattcattgttaaatatatttt 130
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaac 198
||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 131 catgtacacatatagttttacatatttcacaattttttttaataagacgaacggttaaac 190
Query: 199 atgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggg 242
|| | ||||||||| |||||| ||||| ||||| || |||||||
Sbjct: 191 atatactaaaaagttaacggtatcaaatattttgaagcggaggg 234
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || ||||||||| |||||||||||||||||| ||| |
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtgaacggtgtcaaacattttgaaatga 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||| |||||||| ||||| |||||| |||||||| || ||||| ||| ||||||||
Sbjct: 232 ctccgcttcaaaatatttgataccgttaactttttag-tatatgtttaaccgttcgtctt 174
Query: 75 attcaaaaaa 84
||| ||||||
Sbjct: 173 attaaaaaaa 164
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 248 bits (125), Expect = 3e-65
Identities = 213/240 (88%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaa-tgtttgacaccgttgactttttaaatacgtgtttgacca 66
||||||||||||||| |||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 1 atactctctccgttttaaaaatgtttgacaccgttgactttctag-tacgtgtttgacca 59
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
||| || |||||||||||||||| ||| |||||||| |||||||| ||||||||||||||
Sbjct: 60 ttcatcctattcaaaaaatttaaataactatttattattttcatatcatttgattcattg 119
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnt-ttaataag 184
|||||||||||||||||||||||||||||||||| |||||| | | ||||||
Sbjct: 120 ttaaatatactttcatgtacacatatagttttacatatttcacaaacttttatgaataag 179
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||
Sbjct: 180 acgaacggttaaacatgtgttaaaaagtcaacggtgttaaacattttgaaatggagggag 239
Score = 67.9 bits (34), Expect = 7e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| ||||||||||||| |||||||||||||||| || || ||||| ||| ||||||||
Sbjct: 235 ctccatttcaaaatgtttaacaccgttgacttttt-aacacatgtttaaccgttcgtctt 177
Query: 75 attcaaaaaa 84
||||| ||||
Sbjct: 176 attcataaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaaca-ttttaaaacggagggagtat 247
||||| || ||| |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 54 aaacacgtactagaaagtcaacggtgtcaaacatttttaaaacggagagagtat 1
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 248 bits (125), Expect = 3e-65
Identities = 211/240 (87%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacgccgttaactttttag-tatgtgtttgactatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttaatctttttatatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
|||||| |||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 121 taatatattttcatgtacacatatagttttacatattttataaatttttttaataagacg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||| |||||||||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct: 181 aacggccaaacatgtgctaaagagtcaacggcgttaaacattttaaaacggagggagtat 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| || ||||| | ||||||||| ||||| |||||||||||| |||
Sbjct: 72 tttaataagacgaatagtcaaacacatactaaaaagttaacggcgtcaaacattttgaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| ||||||||| || ||||||||| |||| || |||||| || |
Sbjct: 240 atactccctccgttttaaaatgtttaacgccgttgactctttagc-acatgtttggccgt 182
Query: 68 tcgtcttattcaaaaaattta 88
|||||||||| ||||||||||
Sbjct: 181 tcgtcttattaaaaaaattta 161
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 246 bits (124), Expect = 1e-64
Identities = 198/223 (88%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||| ||
Sbjct: 18 aaatgtttgacaccgttgactttttaaa-atatgtttgaccgttcttctcattcaaacaa 76
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 77 tttaagtaactatttattctttttatatcatttgattcattgttaaatatactttcatgt 136
Query: 144 acacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtg 203
|| ||||||||||||| |||||| |||||||||||||||||||||| || ||
Sbjct: 137 acccatatagttttacatatttcatagatttttttaataagacgaacggttaaatatatg 196
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 197 ctaaaaagtcaacggtgtcaaacattttgaaacggaaggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||||||||||||||||||||||||||
Sbjct: 232 tccgtttcaaaatgtttgacaccgttgacttttta 198
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| |||||| | |||||||||||||||||||||||||| | | ||||||||||
Sbjct: 61 gaacggtcaaacatattttaaaaagtcaacggtgtcaaacatttaaggatggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
>RF01058;MIR806;AC145327.2/52567-52806 39947:Oryza sativa Japonica
Group
Length = 240
Score = 246 bits (124), Expect = 1e-64
Identities = 210/239 (87%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 2 tactctctctatttcaaaatatttgacaccgttgactttttagg-acgtgtttaaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 agtcttatttaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||| | |||||||||||||||||| |||||| ||||||| |||
Sbjct: 121 aaatatacttttacgtacacatatagttttacatatttcacaaacttttttaatagaacg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| || |||||| |||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 181 aacagtcaaacatatgctaaaaagtcaacggtgtcaaacattttaaaacgtagagagta 239
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 239 tactctctacgttttaaaatgtttgacaccgttgacttttta 198
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||||| || ||||||||| || |||||||||||||||||||||| |||||
Sbjct: 69 aataagactaatggttaaacacgtcctaaaaagtcaacggtgtcaaatatttt 17
>RF01058;MIR806;AP005804.2/167343-167104 39947:Oryza sativa Japonica
Group
Length = 240
Score = 246 bits (124), Expect = 1e-64
Identities = 210/239 (87%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| |||| ||||||||| ||||| | || |||||||||||||
Sbjct: 2 tactccctccgttttaaaatatttggcaccgttgattttttta-tatgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 61 cgttttatttaaaaaatttaagtaattatttattcttttcatatcatttgattcattgct 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
|||||||||||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcacatttttttttaataaaacg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||| ||||||||||| || ||||||||| ||||| ||| ||||||||||
Sbjct: 181 aacggttaaacatatgctaaaaagttaatggtgtcaaatattttgaaatggagggagta 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 42 aaaaaatcaacggtgccaaatattttaaaacggagggagta 2
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa Indica
Group
Length = 238
Score = 244 bits (123), Expect = 5e-64
Identities = 196/219 (89%), Gaps = 4/219 (1%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 12 gtttcaaaatgtttgacatcgttgactttttag-tacgtgtttgaccattcgttttattc 70
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 71 aaaaaatttaagtaattatttattccttttatatcatttgattcattgttaaatatactt 130
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
||||||||||||||||||||| |||||| |||||||||||||| ||| |||
Sbjct: 131 tcatgtacacatatagttttatatatttc--acatttttttaataagacgaatggtcaaa 188
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaac 236
|||||| |||||||| |||||||| ||||||||||||||
Sbjct: 189 catgtgttaaaaagtgaacggtgtgaaacattttaaaac 227
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattc 69
||||| || |||| ||||||||| |||||||| ||||||||| || |||||||||||||
Sbjct: 236 actctatcagttttaaaatgtttcacaccgttcactttttaac-acatgtttgaccattc 178
Query: 70 gtcttattcaaaaaat 85
|||||||| |||||||
Sbjct: 177 gtcttattaaaaaaat 162
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||| ||||| ||| ||||| || |||||||||||||| ||||||||||||| |||| |
Sbjct: 69 aataaaacgaatggtcaaacacgtactaaaaagtcaacgatgtcaaacattttgaaactg 10
Query: 239 agggagta 246
| ||||||
Sbjct: 9 atggagta 2
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 244 bits (123), Expect = 5e-64
Identities = 175/194 (90%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 55 cgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-ca 113
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 51 cgtgtttgaccattcgtcttattcaaaaaatttaagtcattatttattcttttcatatca 110
Query: 114 tttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnn 173
||||||||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 111 tttgattcatttttaaatatactttcatgcacacatatagttttacatatttcacaaaat 170
Query: 174 nntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaa 233
|||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |
Sbjct: 171 tttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgtcaaacattttga 230
Query: 234 aacggagggagtat 247
|||||| |||||||
Sbjct: 231 aacggatggagtat 244
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||||||||||||||| |||||||| || | ||||||| |||||||||
Sbjct: 236 tccgtttcaaaatgtttgacaccgttaactttttagc-acatatttgaccgttcgtctta 178
Query: 76 ttcaaaaa 83
|| |||||
Sbjct: 177 ttaaaaaa 170
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 204 ctaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||||
Sbjct: 37 ctaaaaagtcaacggtgtcaaacatttt 10
>RF01058;MIR806;AACV01006891.1/73451-73212 39947:Oryza sativa
Japonica Group
Length = 240
Score = 244 bits (123), Expect = 5e-64
Identities = 212/241 (87%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
|||||||||||||||||||||||||| ||||||||||||| | ||||||| | ||||||
Sbjct: 2 tactctctccgtttcaaaatgtttgataccgttgactttt--agtacgtgtctaaccatt 59
Query: 69 cgtcttattcaaaaaatttaa-gtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct: 60 cgtcttattcaaaaaatttaaagtaattatttattctttttatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||| || ||||||||||||| ||||| |||||||||||
Sbjct: 120 taaatatactttcatgcacccatatagttttacatattttataaacttttttaataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||||||| || |||||||| ||||| ||||| |||||||
Sbjct: 180 gaacggttaaacatgtgctaaaaagttaatggtgtcaagtattttgaaacgttgggagta 239
Query: 247 t 247
|
Sbjct: 240 t 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||||| ||| || |||||| ||||||||| ||||||||||| ||||||
Sbjct: 68 aataagacgaatggttagacacgtactaaaa-gtcaacggtatcaaacattttgaaacgg 10
Query: 239 agggagta 246
|| |||||
Sbjct: 9 agagagta 2
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 244 bits (123), Expect = 5e-64
Identities = 204/231 (88%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||||||||||||||||||| ||||| || || ||| ||||||
Sbjct: 2 tactcactccgtttcaaaatgtttgacaccgttgacattttag-tatgtatttaaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgtta 128
| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tattttattaaaaaaatttaagtaattatttattcttttcatatatttgattcattgtta 120
Query: 129 aatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacga 188
||||||||||||||||||||| ||||||||| |||||| |||||||||| ||
Sbjct: 121 aatatactttcatgtacacatgtagttttacatatttc-acaaattttttaataagatga 179
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
| ||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 230
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||||||||||||||||||||||| | || ||||||||||||| |||||
Sbjct: 230 tccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttgaccattcatctta 172
Query: 76 ttcaaaaa 83
|| |||||
Sbjct: 171 ttaaaaaa 164
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||| ||||||||||||||||||||| |||||||| |||||
Sbjct: 44 ctaaaatgtcaacggtgtcaaacattttgaaacggagtgagta 2
>RF01058;MIR806;AP002882.2/89577-89811 39947:Oryza sativa Japonica
Group
Length = 235
Score = 244 bits (123), Expect = 5e-64
Identities = 175/193 (90%), Gaps = 3/193 (1%)
Strand = Plus / Plus
Query: 56 gtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-cat 114
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 45 gtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcat 104
Query: 115 ttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnn 174
|| ||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 105 tttattaattgttaaatatactttcatgtacacatat--ttttacatatttcacaattat 162
Query: 175 ntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaa 234
||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 163 ttttaataagacaaacggttaaacacgtgctaaaaagtcaacagtgtcaaacattttaaa 222
Query: 235 acggagggagtat 247
|||||||||||||
Sbjct: 223 acggagggagtat 235
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 235 atactccctccgttttaaaatgtttgacactgttgacttttta 193
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 242 bits (122), Expect = 2e-63
Identities = 213/243 (87%), Gaps = 5/243 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttatagt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtattt---cnnnnnnnnntttaataa 183
|||||||||||||| ||||||||||||||||| ||||| | || |||||
Sbjct: 120 aaaatatactttcatatacacatatagttttacatatttcaacaaaaaaaatttgaataa 179
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|| ||||||| |||||| ||||||||||||| |||||||||||||||||||| | |||
Sbjct: 180 gatgaacggtaaaacatacactaaaaagtcaacagtgtcaaacattttaaaacgaatgga 239
Query: 244 gta 246
|||
Sbjct: 240 gta 242
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 18 cgtttcaaaatgtttgacaccgttgacttttta 50
||||| |||||||||||||| ||||||||||||
Sbjct: 233 cgttttaaaatgtttgacactgttgacttttta 201
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 242 bits (122), Expect = 2e-63
Identities = 207/234 (88%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||||||
Sbjct: 8 ctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgtctt 67
Query: 75 a-ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaata 132
| || |||||| ||||||||||||||||| |||||||| ||||| ||| || ||||||||
Sbjct: 68 atttaaaaaaagttaagtaattatttatttttttcatatcatttaattaatcgttaaata 127
Query: 133 tactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacgg 192
|||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 128 aactttcatgtacacatatagttttacatatttc-acaaattttttaataagaagaacgg 186
Query: 193 ttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
| |||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 187 tcaaacatgtgctaaaaagtcaacggagtcaaacattttgaaacggagggagta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||| ||||||||||||| | || ||||||||| ||
Sbjct: 240 tactccctccgtttcaaaatgtttgactccgttgacttttt-agcacatgtttgaccgtt 182
Query: 69 cgtcttattcaaaaa 83
| ||||||| |||||
Sbjct: 181 cttcttattaaaaaa 167
Score = 67.9 bits (34), Expect = 7e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttaaaacg 237
||||||||||||||| ||||| | || ||||||||||||||||||||||||| |||||
Sbjct: 70 aataagacgaacggtcaaacacttacttaaaaagtcaacggtgtcaaacatttcgaaacg 11
Query: 238 gaggga 243
||||||
Sbjct: 10 gaggga 5
>RF01058;MIR806;AAAA02033841.1/62825-63065 39946:Oryza sativa Indica
Group
Length = 241
Score = 242 bits (122), Expect = 2e-63
Identities = 212/241 (87%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||| |
Sbjct: 1 atactctttccgttttaaaatgtttgac-ccgttgactttttaagtacgtgtttgaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 60 tcgtcttatttaaaaaatttaagtaattatttattcttttcatatcatttgactcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||| || ||| | |||||||||
Sbjct: 120 taaatatactttcatgtacacatatagttaaacatataacataaatttaaataataagac 179
Query: 187 gaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||||| ||||| || | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 180 gaacggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggagggagt 239
Query: 246 a 246
|
Sbjct: 240 a 240
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccgtt 181
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 180 cgtcttatt 172
Score = 67.9 bits (34), Expect = 7e-11
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttaaaacg 237
||||||||||||||| ||||| || || ||||||||||||| ||||||||||||||||||
Sbjct: 69 aataagacgaacggtcaaacacgtacttaaaaagtcaacgg-gtcaaacattttaaaacg 11
Query: 238 ga 239
||
Sbjct: 10 ga 9
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 242 bits (122), Expect = 2e-63
Identities = 212/241 (87%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgtttactttttag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaacaaattatttattattttcatattatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||||||||||||||| |||| ||||||| |||||| ||| |||||||
Sbjct: 120 taaatatactttcatgtacaaatatggttttacatatttcacaattttttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||| |||||||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct: 180 cgaatggtgaaacatgtgctaaaaagtgaacggtgcataacattttgaaacggagggagt 239
Query: 246 a 246
|
Sbjct: 240 a 240
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || ||||||||| |||||||||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtaaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||| ||||||| |||||||| || ||||| ||||||
Sbjct: 240 tactccctccgtttcaaaatgttatgcaccgttcactttttagc-acatgtttcaccatt 182
Query: 69 cgtcttattcaaaaaa 84
||||||||||||||||
Sbjct: 181 cgtcttattcaaaaaa 166
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 242 bits (122), Expect = 2e-63
Identities = 203/229 (88%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||||||||| | ||||| |||||| | |||||||||||||||||||||||||
Sbjct: 14 tttcaaaatgtttgatattgttgattttttag-tgcgtgtttgaccattcgtcttattca 72
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||
Sbjct: 73 aaaaatttaagtaattatttattctttttatatcatttaatttattgttaaatatacttt 132
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaa 197
|||||||||||||| |||||| |||||| ||| ||||| |||||||||||||
Sbjct: 133 catgtacacatataattttacatatttcaaaaaaaaatttaaataaaacgaacggttaaa 192
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 193 catgtgctaaaaagtcaacggtgttaaatattttaaaacggagggagta 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| |||||||| ||||| ||| |||||||||||||||||
Sbjct: 241 tactccctccgttttaaaatatttaacaccgttgacttttta 200
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 242 bits (122), Expect = 2e-63
Identities = 205/230 (89%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||| ||||||||||||||||||||| || ||||| |||||| ||||||||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttag-tatatgtttaaccatttgtcttattca 71
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 72 aaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatacttt 131
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaac 198
|||||| ||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 132 catgtatacatatagttttatatatttc-gcaatttttttaataagacgaacgattaaac 190
Query: 199 atgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|| || ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 191 ataggcttaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaa 51
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttgactttttaa 197
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||||| || |||||||||| | |||||||||||||||||||||| |||||
Sbjct: 69 aataagacaaatggttaaacatatactaaaaagtcaacggtgtcaaatatttt 17
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 242 bits (122), Expect = 2e-63
Identities = 213/242 (88%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccat 60
Query: 68 tcgtcttattc-aaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcatta 120
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataaga 185
||||||||| |||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 121 ttaaatatattttcatgtacacatatagttttacatatttc-ataatttttttaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||||||| | |||||||||||| || | || ||||||||| ||| | |||||||
Sbjct: 180 cgaatggttaaatacgtgctaaaaagttaaggccgttaaacattttgaaatgaagggagt 239
Query: 246 at 247
||
Sbjct: 240 at 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 42 aaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02000035.1/1574-1333 39946:Oryza sativa Indica
Group
Length = 242
Score = 242 bits (122), Expect = 2e-63
Identities = 194/217 (89%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttatag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 60 tcgtcttattcagaaaatttaagtaattatttattcttttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnt-ttaataaga 185
|||||||||||||| |||||||||||||||||| |||||| | | ||||||
Sbjct: 120 taaatatactttcacgtacacatatagttttacctatttcacgattttctctcgataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtc 222
|||||||| |||||||||||||| |||||||||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaatagtcaacggtgtc 216
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || ||| |||||||||||||||||| ||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactataaagtcaacggtgtcaaatattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AAAA02011276.1/49843-50075 39946:Oryza sativa Indica
Group
Length = 233
Score = 240 bits (121), Expect = 8e-63
Identities = 189/212 (89%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 37 ccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaatta 96
|||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 23 ccgttgactttttagc-acgtgtttgaccatttgtcttattcaaaaaaattaagtaatta 81
Query: 97 tttattcttttcata-catttgattcattgttaaatatactttcatgtacacatatagtt 155
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 82 tttattcttttcatatcatttgattaattgttaaatatactttcatgtacacatataggt 141
Query: 156 ttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagtcaa 215
|||| |||||| ||||||||||||||| || ||||| |||||||||||||||
Sbjct: 142 ttacatatttcacaaatttttttaataagacgaacagtcaaacacgtgctaaaaagtcaa 201
Query: 216 cggtgtcaaacattttaaaacggagggagtat 247
|| ||||||||||||||||||||||||||||
Sbjct: 202 cgtagtcaaacattttaaaacggagggagtat 233
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||||||||||| |||||||||||| | ||||||||||| |
Sbjct: 233 atactccctccgttttaaaatgtttgactacgttgacttttt-agcacgtgtttgactgt 175
Query: 68 tcgtcttattcaaaaaattt 87
|||||||||| |||||||||
Sbjct: 174 tcgtcttattaaaaaaattt 155
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacgg 218
|||||||| || ||| ||||| ||||||||||||||||||
Sbjct: 62 aataagacaaatggtcaaacacgtgctaaaaagtcaacgg 23
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 240 bits (121), Expect = 8e-63
Identities = 201/229 (87%), Gaps = 5/229 (2%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
|||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||
Sbjct: 19 tttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtcttattca 78
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||
Sbjct: 79 aaaaatttaagtaattatttattctttttatatcatttgatttattgttaaatatacttt 138
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaac 198
||||| |||||||||||||| |||||| |||||||||||||||| | |
Sbjct: 139 gatgtatacatatagttttacatatttcacaaatttttttaataagacgaacg----atc 194
Query: 199 atgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 195 atgtgttaaaaagtcaacggtgtcaaacattttgaaatagagggagtat 243
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaa 51
||||||||||||||||||||||||||||||||
Sbjct: 231 tttcaaaatgtttgacaccgttgactttttaa 200
Score = 52.0 bits (26), Expect = 4e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 231
||||||||||| ||| ||| |||| || ||||| ||||||||||||||||||||
Sbjct: 76 aataagacgaatggtcaaatatgtacttaaaaaatcaacggtgtcaaacatttt 23
>RF01058;MIR806;AP005885.3/85239-85476 39947:Oryza sativa Japonica
Group
Length = 238
Score = 240 bits (121), Expect = 8e-63
Identities = 210/239 (87%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| |||||||||||||||||| ||| | |||||| |||||| |||||||||
Sbjct: 2 tactccctccatttcaaaatgtttgacacagttaaatttttag-tacgtgcttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttaaataattattcattcttttcatatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 121 aaatatactttcatgtacacatatagtttta--tatttttcaagagtttttaataagaca 178
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||| |||||| ||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 179 aacggtcaaacatatgctaaaaagttaacggtgtcaaatattttaaaacggaggaagta 237
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| || || || ||||||| | ||| |||||||||||||| ||| ||
Sbjct: 69 aataagacgaatggtcaagcacgtactaaaaatttaactgtgtcaaacattttgaaatgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||| ||||| |||||||||||| ||||||||
Sbjct: 231 ctccgttttaaaatatttgacaccgttaacttttta 196
>RF01058;MIR806;AACV01022161.1/13533-13298 39947:Oryza sativa
Japonica Group
Length = 236
Score = 238 bits (120), Expect = 3e-62
Identities = 194/219 (88%), Gaps = 2/219 (0%)
Strand = Plus / Plus
Query: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaa 89
||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 19 tttgacaccgttgaccttttaa-tacgtgtttgaccattcgtcttattaaaaaaatttaa 77
Query: 90 gtaattatttattcttttcata-catttgattcattgttaaatatactttcatgtacaca 148
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 78 ataattatttattcttttcatattatttgattcattattaaatatactttcatgtacaca 137
Query: 149 tatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaa 208
| ||||||||| ||||| | |||||||||||| |||||||||||||||||
Sbjct: 138 tgtagttttacatattttttatttttttaaaataagacgaacagttaaacatgtgctaaa 197
Query: 209 aagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||| | |||||||||||||||||||||||||||
Sbjct: 198 aagtcaacaatatcaaacattttaaaacggagggagtat 236
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 225
|||||||||||||| ||| ||||| || ||||| |||||||||||||||
Sbjct: 68 tttaataagacgaatggtcaaacacgtattaaaaggtcaacggtgtcaaa 19
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||| ||||||||||| | ||||||||||||
Sbjct: 236 atactccctccgttttaaaatgtttgatattgttgacttttta 194
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 238 bits (120), Expect = 3e-62
Identities = 200/229 (87%), Gaps = 8/229 (3%)
Strand = Plus / Plus
Query: 26 aatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa-- 83
||||||| |||||||||| ||||||| | ||||||||||||||||||||||||||||
Sbjct: 19 aatgtttaacaccgttgattttttaagcatgtgtttgaccattcgtcttattcaaaaata 78
Query: 84 -----atttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 79 tttaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactt 138
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
|||| ||||||||||||||||| |||||| || ||||||||||||||| |||
Sbjct: 139 tcatatacacatatagttttacatatttcacaaattttttgaataagacgaacggtcaaa 198
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 199 catgtgctaaaaagttaacggtgtcaaatattttgaaacggagggagta 247
Score = 85.7 bits (43), Expect = 3e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||| |||||||||||| ||||||| | || ||||||||| ||
Sbjct: 247 tactccctccgtttcaaaatatttgacaccgttaacttttt-agcacatgtttgaccgtt 189
Query: 69 cgtcttattcaaaaaattt 87
|||||||||||||||||||
Sbjct: 188 cgtcttattcaaaaaattt 170
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 236 bits (119), Expect = 1e-61
Identities = 212/241 (87%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttag-tacgtgtttaaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 60 tcatcttattcaaaaagtttaagtaattatttattcttttcatatcatttaattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
||||||||||||||||||||| ||| |||||| |||||| ||| |||||||
Sbjct: 120 taaatatactttcatgtacac--ataattttacatatttcactaattattttaaataaga 177
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||||||| |||||||||||| | |||||||||||| |||||||||||||| ||||
Sbjct: 178 cgaatggttaaatatgtgctaaaaaattaacggtgtcaaatattttaaaacggagtgagt 237
Query: 246 a 246
|
Sbjct: 238 a 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||||||||| || |||||||||||||||||||||| ||||| ||||||
Sbjct: 69 aataagatgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| |||||||| ||||| |||||||||||| | ||||||
Sbjct: 238 tactcactccgttttaaaatatttgacaccgttaatttttta 197
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 209/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
|||||||||||||| ||||||||||| || |||||||||||| ||||||||| | ||||
Sbjct: 2 tactctctccgttttaaaatgtttgatacagttgactttttag-tacgtgtttaatcatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| |||||||||||||| |||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 61 cgttttattcaaaaaattaaagtaattatttattcttttcacatcatttgatttattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
||||||||||||||||||||| |||||||||| |||||| ||| |||||||
Sbjct: 121 aaatatactttcatgtacacaaatagttttacatatttcacaaaaatttttaaataagat 180
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 181 gaacggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggag 238
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||| ||||| | ||||||| || ||||||||||||| || ||||||||||||||||||
Sbjct: 69 aataaaacgaatgattaaacacgtactaaaaagtcaactgtatcaaacattttaaaacgg 10
Query: 239 agggagta 246
|| |||||
Sbjct: 9 agagagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||||| |||||||||||||||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgacttttta 199
>RF01058;MIR806;AACV01014691.1/845-606 39947:Oryza sativa Japonica
Group
Length = 240
Score = 236 bits (119), Expect = 1e-61
Identities = 202/230 (87%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 12 gtttcaaaatgtttgaccccgttgactttttag-tacgggtttgaccattcatcttattc 70
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 71 aaaaaatttaagtaattatttattcttttcatattatttgatttattgttaaatatactt 130
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
|||| ||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 131 tcatttacacatatagttttacatatttcacaaattttttaaataagacgaacggttaag 190
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||| | |||||| |||||| |||||||| |||||||||| |||||||||
Sbjct: 191 catatactaaaatgtcaacagtgtcaaatattttaaaacaaagggagtat 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaac 236
||||||| ||| ||| |||| || ||||||||||||||| |||||||||||| ||||
Sbjct: 69 aataagatgaatggtcaaacccgtactaaaaagtcaacggggtcaaacattttgaaac 12
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 212/242 (87%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||||||||||||||||||||||||| || ||||| ||| |
Sbjct: 1 atactccctccgttttgaaatgtttgacaccgttgactttttagc-acatgtttaaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||| ||||||||| |||||| |||||| |||||| ||| |||||||
Sbjct: 120 taaatatattttcatgtaggcatataattttacatatttcacaaaaatttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 239
Query: 246 at 247
||
Sbjct: 240 at 241
Score = 129 bits (65), Expect = 2e-29
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 69 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttcaaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| ||||||||||||||||||||||||| | || ||||||||| |
Sbjct: 241 atactccctccgtttcgaaatgtttgacaccgttgacttttt-agcacatgtttgaccgt 183
Query: 68 tcgtcttattcaaaaa 83
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02022678.1/8425-8663 39946:Oryza sativa Indica
Group
Length = 239
Score = 234 bits (118), Expect = 5e-61
Identities = 209/240 (87%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||| ||||||||| ||| || ||||||| ||||||||||| ||||||||| |||
Sbjct: 1 atactctatccgtttcagaatattggacaccgatgactttttaagtacgtgttta--cat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 59 ttatcttattcaaaaattttaagtaattatttattcttttcatatcatttgattcattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 119 taaatatactttcatgtacacatatagttttacatatttaataaatatttttaataagac 178
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||| | ||||| |||||| |||||||||||||||||| |||||||||| || ||||||
Sbjct: 179 gaacgatcaaacacgtgctataaagtcaacggtgtcaaatattttaaaacagatggagta 238
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||| ||||| |||||||||||||||||| | | |||||||||| | |||||||||||
Sbjct: 228 gttttaaaatatttgacaccgttgactttat-agcacgtgtttgatcgttcgtcttatta 170
Query: 79 aaaaaattta 88
|||| |||||
Sbjct: 169 aaaatattta 160
>RF01058;MIR806;AL731587.2/124021-123783 39947:Oryza sativa Japonica
Group
Length = 239
Score = 234 bits (118), Expect = 5e-61
Identities = 203/230 (88%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 12 gttttaaaatgtttgacactgttgactttttaga-acgtgtttgaccattcgtcttattc 70
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
|||||| ||||||||||||||||| |||| || |||||||||||||||||||||||| |
Sbjct: 71 aaaaaaattaagtaattatttattttttttgtatcatttgattcattgttaaatatacat 130
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
| || ||||||||||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 131 ttatatacacatatagttttacatatttc-acaatttttttaataagacaaacggttaaa 189
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 190 tatgtgctaaaaagtcaacggtgtcaaatattttaaaacagagagagtat 239
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || ||||||||||||| ||||||||||||||||||| |
Sbjct: 69 aataagacgaatggtcaaacacgttctaaaaagtcaacagtgtcaaacattttaaaacag 10
Query: 239 agggagtat 247
||| |||||
Sbjct: 9 aggaagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||| |||| ||||| |||||||||||||||||||||
Sbjct: 239 atactctctctgttttaaaatatttgacaccgttgacttttta 197
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 210/237 (88%), Gaps = 5/237 (2%)
Strand = Plus / Plus
Query: 11 ctctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcg 70
|||||||| ||||||||| ||||||||||| |||||||||| || |||||||||||||||
Sbjct: 4 ctctctccatttcaaaatatttgacaccgtggactttttaa-tatgtgtttgaccattcg 62
Query: 71 tcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaa 129
|||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct: 63 tcttattcaaaaaatttaagtaattatttatt-tttttatatcatttgatttattgttaa 121
Query: 130 atatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacga 188
||| ||||||||||||||||||| |||||| |||||| || ||||||||||
Sbjct: 122 ataaactttcatgtacacatataattttacatatttcacaaattttattgaataagacga 181
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaaca-ttttaaaacggagggag 244
|||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||
Sbjct: 182 acggttaaacatgtgctaaaaagttaacggtgtcaaatattttttaaacggagggag 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| | ||||||||| ||||||||||| ||||| ||| ||
Sbjct: 69 aataagacgaatggtcaaacacatattaaaaagtccacggtgtcaaatattttgaaatgg 10
Query: 239 ag 240
||
Sbjct: 9 ag 8
>RF01058;MIR806;AAAA02026273.1/286-45 39946:Oryza sativa Indica
Group
Length = 242
Score = 232 bits (117), Expect = 2e-60
Identities = 214/243 (88%), Gaps = 6/243 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 2 tactccctcccttttaaaatgttttacaccgttgactttttaac-acgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 61 cgtcttattcaataaatttaagtaattatttattcttttcatatcatttgatttattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatt--tcnnnnnnnnntttaataaga 185
|||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatattaatttcacacttttttaataaga 180
Query: 186 cgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||||||||||||| | ||||||||||| || || ||| ||||| ||||||||||||
Sbjct: 181 cgaacggttaaacatgtacttaaaaagtcaatggcgt-aaatattttgaaacggagggag 239
Query: 245 tat 247
|||
Sbjct: 240 tat 242
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| ||| ||||||||||||||||| ||||||||||||| ||
Sbjct: 69 aataagacgaatggtcaaacacgtgttaaaaagtcaacggtgtaaaacattttaaaaggg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| ||| || || |||||||||||| ||| ||||| ||| |
Sbjct: 242 atactccctccgtttcaaaatattt-acgccattgactttttaagtacatgtttaaccgt 184
Query: 68 tcgtcttattcaaaaa 83
|||||||||| |||||
Sbjct: 183 tcgtcttattaaaaaa 168
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 232 bits (117), Expect = 2e-60
Identities = 198/224 (88%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 2 tactccctccgtttcaaaatatttgataccgttgactttttag-tacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgtt 127
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 cgtcttatt-aaaaaatttaagtaattatttattcttttcatattatttgattcattgtt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||| |||||||||||||||||| |||||| ||||||||||||
Sbjct: 120 aaatatactttcaagtacacatatagttttacatatttcacaattttttttaataagacg 179
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||| ||| || ||||||||||||||| | || |||||||||
Sbjct: 180 aacggtcaaatatatgctaaaaagtcaactgcgttaaacatttt 223
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| |||||||| |||||||||||||||| ||||| ||||| |||
Sbjct: 72 tttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatattttgaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 209/240 (87%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| ||| || |||||||||||||| ||| ||||||||||||
Sbjct: 2 tactccctccgttttaaaatatttaacgccgttgactttttag-tacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||| ||| ||
Sbjct: 61 cgtcttattaaaaaaatttaactaattatttattctttttatatcatttgatttattatt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
|||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 121 aaatatactttcatttacacatatagttttacatatttcacaaatttttttaataagacg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|| || ||||||||||||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 181 aattgtcaaacatgtgctaaaaggttaacggtgtcaaacattttaaaacggaggaagtat 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| |||||||| ||||||||||||||| || ||| |||||||||
Sbjct: 72 tttaataagacgaatggtcaaacatgtactaaaaagtcaacggcgttaaatattttaaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||| |||||||||||||||||| || |||| | || |||||||| |||||||||
Sbjct: 233 ctccgttttaaaatgtttgacaccgttaacctttt-agcacatgtttgacaattcgtctt 175
Query: 75 attcaaaaaattt 87
||| |||||||||
Sbjct: 174 attaaaaaaattt 162
>RF01058;MIR806;AP005878.2/90818-90583 39947:Oryza sativa Japonica
Group
Length = 236
Score = 232 bits (117), Expect = 2e-60
Identities = 203/228 (89%), Gaps = 5/228 (2%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 gtttcaagatgtttgacaccgttgactttttag-tacgtgtttgaccattcgtcttatta 70
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
|||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 71 aaaaaatttaagaaattatttatt-ttttcatatcatttgatttattgttaaatatactt 129
Query: 138 tcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggttaa 196
||||||||||||||||||||| |||||| ||||||||||||||||| | |
Sbjct: 130 tcatgtacacatatagttttatatatttcacaaattttttttaataagacgaacgg-tca 188
Query: 197 acatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||||||||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 189 acatgtgctaaaaagtcaacggtgtcaaatattttgaaacggatggag 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacat 228
|||||||||||||| ||| ||||| || |||||||||||||||||||||||||
Sbjct: 72 tttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||||||| |||||||||||||||||||||
Sbjct: 231 tccgtttcaaaatatttgacaccgttgacttttta 197
>RF01058;MIR806;AAAA02025675.1/1048-809 39946:Oryza sativa Indica
Group
Length = 240
Score = 230 bits (116), Expect = 8e-60
Identities = 208/239 (87%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtgtttgaacatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|||||||||||| |||||||||||||||||||||||| || || |||| ||||||| |||
Sbjct: 61 cgtcttattcaagaaatttaagtaattatttattcttatcgtatcattagattcatggtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||||||||||| | || |||| | | | ||||||||
Sbjct: 121 aaatatactttcatgtacacatatagtgtaacatattccacaaatttgtgtcataagacg 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|| | | ||||| || |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 aatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 95.6 bits (48), Expect = 3e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtgtttgaacatt 181
Query: 69 cgtcttat 76
||||||||
Sbjct: 180 cgtcttat 173
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| | | ||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 69 aataagacgaatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 230 bits (116), Expect = 8e-60
Identities = 150/159 (94%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcatt 61
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaatttaaataattatttattcttttcatatcatttgattcattgtt 121
Query: 128 aaatatactttcatgtacacatatagttttacgtatttc 166
||||||||||| |||| |||||||||||||| ||||||
Sbjct: 122 aaatatactttaatgt--acatatagttttacatatttc 158
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacac 37
||||| |||||||||||||||||||||||
Sbjct: 227 tactccctccgtttcaaaatgtttgacac 199
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaattt 87
||||| ||| ||| |||||||||||||||||||||
Sbjct: 196 tacgtatttaaccgttcgtcttattcaaaaaattt 162
>RF01058;MIR806;AAAA02003225.1/20808-21050 39946:Oryza sativa Indica
Group
Length = 243
Score = 228 bits (115), Expect = 3e-59
Identities = 199/226 (88%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||| |||||| ||||| ||||| | ||||||| ||||||||||| |||||||||||||
Sbjct: 12 gttttaaaatggttgacgccgttaattttttaagtacgtgtttgatcattcgtcttatta 71
Query: 79 aaaaaat-ttaagtaattatttattcttttcatac-atttgattcattgttaaatatact 136
|||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 72 aaaaaaaattaagtaattatttattctttttatattatttgattcattgttaaatatact 131
Query: 137 ttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaa 196
||||||| ||||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 132 ttcatgtgcacatatagttttacatatttcacaaatttttttaataagatgaacggttaa 191
Query: 197 acatgtgctaaaaagtcaacggtgtcaaa-cattttaaaacggagg 241
|||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 192 acatgtgctaaaaagttaacggtgtcaaaccattttaaaacggagg 237
Score = 44.1 bits (22), Expect = 0.001
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatg-tttgacaccgttgactttttaaatacgtgtttgaccattcgtct 73
|||||||| |||||| |||||||||||| ||||||| | || ||||| ||| ||| |||
Sbjct: 236 ctccgttttaaaatggtttgacaccgttaacttttt-agcacatgtttaaccgttcatct 178
Query: 74 tattcaaaaaattt 87
|||| |||||||||
Sbjct: 177 tattaaaaaaattt 164
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 228 bits (115), Expect = 3e-59
Identities = 208/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||||||||| ||||| || ||||| |||||| || ||||||||||||
Sbjct: 1 atactccctccatttcaaaatatttgaaactgttgattttttag-tatgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 60 tcgtcttatttaaaaaatttaagtaattatttgttcttttcatatcatttgattcattat 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||||||||||| ||||||||||||||| |||||| ||| |||||||
Sbjct: 120 taaatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 180 cgaacggtcaaatatgtgctaaaaagtcaacagtgtcaaacattttgaaacggaggga 237
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||||||||||||||||| |||||||||||| || | ||||||| ||||||||
Sbjct: 234 ctccgtttcaaaatgtttgacactgttgactttttagc-acatatttgaccgttcgtctt 176
Query: 75 attcaaaaaattt 87
|||||||||||||
Sbjct: 175 attcaaaaaattt 163
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| | ||||||| ||||| || ||||| ||||| ||| ||
Sbjct: 69 aataagacgaatggtcaaacacatactaaaaaatcaacagtttcaaatattttgaaatgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 228 bits (115), Expect = 3e-59
Identities = 203/230 (88%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 13 tttcataatgtttgacaccgttgactttttag-tacgtgtttgaccattcgtcttattta 71
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||||||||||||||||||||||||||||| | | ||||||||||| ||||||||| |||
Sbjct: 72 aaaaatttaagtaattatttattcttttcacatcgtttgattcattattaaatatatttt 131
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaa 197
|||||||||| |||||||||| |||||| ||| ||||||| |||||||||||
Sbjct: 132 catgtacacacatagttttacatatttcacagattcttttgaataagatgaacggttaaa 191
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||||||| ||||||||| ||| | |||||||||||||
Sbjct: 192 catgtgctaaaaagtcaacaatgtcaaaca-tttgatacggagggagtat 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || |||||||||||||||||||||||||| | ||| ||
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattatgaaatgg 10
Query: 239 agggagta 246
| ||||||
Sbjct: 9 atggagta 2
>RF01058;MIR806;AL713932.4/119735-119496 4530:Oryza sativa (rice)
Length = 240
Score = 226 bits (114), Expect = 1e-58
Identities = 140/146 (95%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtgtttgaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattattttttcttttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatata 152
||||||||||||||||||||||||||
Sbjct: 120 taaatatactttcatgtacacatata 145
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 69 aataagacgaacggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 226 bits (114), Expect = 1e-58
Identities = 197/225 (87%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||||||||||||||||| | ||||||| ||| |||||||||||
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccat 60
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 61 tcgttttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattat 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataaga 185
||||||||||||||| ||||||||||||||||| |||||| |||| |||||
Sbjct: 121 taaatatactttcatatacacatatagttttacatatttcacaaactttttttattaaga 180
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
|||||||| |||||| ||||||||| |||||||||| ||| ||||
Sbjct: 181 cgaacggtcaaacatatgctaaaaaatcaacggtgttaaatattt 225
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttaaaacg 237
||||| ||||| ||| |||||||| || ||||| | ||||||||||||||||||||||||
Sbjct: 70 aataaaacgaatggtcaaacatgtacttaaaaaattaacggtgtcaaacattttaaaacg 11
Query: 238 gagggagtat 247
||||||||||
Sbjct: 10 gagggagtat 1
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 226 bits (114), Expect = 1e-58
Identities = 176/197 (89%), Gaps = 2/197 (1%)
Strand = Plus / Plus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 48 tacgtgtttgaccattcgtcttattaaaaaaatttaagtaattatttattcttttcatat 107
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||
Sbjct: 108 catttgattcattgtaaaatatattttcatgtacatatatagttttacatattttacaaa 167
Query: 172 nnnnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 168 ttattttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 227
Query: 231 taaaacggagggagtat 247
| ||||||| |||||||
Sbjct: 228 tgaaacggatggagtat 244
Score = 77.8 bits (39), Expect = 7e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||||||||||||||||||||||| | || ||||||||| || ||||||
Sbjct: 236 tccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttgaccgtttgtctta 178
Query: 76 ttcaaaa 82
|||||||
Sbjct: 177 ttcaaaa 171
>RF01058;MIR806;AP008215.1/601195-601435 39947:Oryza sativa Japonica
Group
Length = 241
Score = 226 bits (114), Expect = 1e-58
Identities = 210/240 (87%), Gaps = 5/240 (2%)
Strand = Plus / Plus
Query: 11 ctctctccgtttcaaaatgtttgacaccgttgactttttaaa-tacgtgtttgaccattc 69
|||| ||||||| |||||||||||| ||||| ||||||||| |||||||||||| ||||
Sbjct: 4 ctctatccgttttaaaatgtttgacgccgttagctttttaaagtacgtgtttgactattc 63
Query: 70 gtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtta 128
|||||||| ||||||||||||||||||||| || ||||||| ||||| ||| |||||||
Sbjct: 64 gtcttatttaaaaaatttaagtaattatttttt--tttcatatcatttaatttattgtta 121
Query: 129 aatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacg 187
||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcataacttttttttaataagacg 181
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||| |||||||||||||||||| |||||||||||||||||| ||| |||| ||||||
Sbjct: 182 aacggtcaaacatgtgctaaaaagttaacggtgtcaaacattttgaaatggagcgagtat 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| |||||||||||||||||||||| ||||||| | || ||||||||| |
Sbjct: 241 atactcgctccatttcaaaatgtttgacaccgttaacttttt-agcacatgtttgaccgt 183
Query: 68 tcgtcttattcaaaaaa 84
|||||||||| ||||||
Sbjct: 182 tcgtcttattaaaaaaa 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacgga 239
||||||| ||||| ||||||||||||||||||||
Sbjct: 43 taaaaagctaacggcgtcaaacattttaaaacgga 9
>RF01058;MIR806;AAAA02007727.1/39772-40015 39946:Oryza sativa Indica
Group
Length = 244
Score = 226 bits (114), Expect = 1e-58
Identities = 195/221 (88%), Gaps = 3/221 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaat-acgtgtttgaccattcgtcttattc 78
|||||||||||||||||||||||| ||||| ||| |||||||| ||||||||| ||||||
Sbjct: 14 tttcaaaatgtttgacaccgttgatttttttaattacgtgtttaaccattcgttttattc 73
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 74 aaaaaatttaagtaattatttattcttttcatatcatttgattctttgttaaatatactt 133
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaa 196
| || ||||| ||||||||||| |||||| ||| ||||||| ||||||| ||
Sbjct: 134 ttatatacacctatagttttacatatttcacaaatttttttaaataagatgaacggtcaa 193
Query: 197 acatgtgctaaaaagtcaacggtgtcaaacattttaaaacg 237
|||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 194 acatatgctaaaaattcaatggtgtcaaacattttaaaacg 234
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||||||||||
Sbjct: 43 aaaaaatcaacggtgtcaaacatttt 18
>RF01058;MIR806;AAAA02014718.1/60336-60096 39946:Oryza sativa Indica
Group
Length = 241
Score = 224 bits (113), Expect = 5e-58
Identities = 207/240 (86%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctcccttttaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 61
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
| ||||||| ||||||| ||||||||||| || ||| ||||| || ||||||| |||
Sbjct: 62 catcttatttaaaaaatgtaagtaattatgtagtctggtcatagcaggggattcatggtt 121
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||| ||||||||||||||||||| |||||| |||||||| |||
Sbjct: 122 aaatatactttgatgtacacatatagttttatatatttcacaattttttttaataaaacg 181
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||| || ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 182 aacagtgaaacatgtgttaaaaagtcaacgatgtcaaacattttgaaacggagggagtat 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaacattttaaaagggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaa 51
|||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 241 atactccctccgtttcaaaatgtttgacatcgttgactttttaa 198
>RF01058;MIR806;AP008209.1/34522251-34522486 39947:Oryza sativa
Japonica Group
Length = 236
Score = 224 bits (113), Expect = 5e-58
Identities = 200/225 (88%), Gaps = 5/225 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttatag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||||
Sbjct: 60 ttatcttattcaaaaaatttaagtaattatttatt-tttttatatcatttgatttattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||| |||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 119 taaatatac-ttcatgtacacatataattttacgtatttc-ataatttttttaataagac 176
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 177 aaacggtcaaacatatgttaaaaagtcaacggtgtcaaacatttt 221
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||| || ||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 53 aaacacgtactataaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/67 (91%), Gaps = 3/67 (4%)
Strand = Plus / Minus
Query: 21 ttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtcttattca 79
||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||| |
Sbjct: 224 ttcaaaatgtttgacaccgttgactttttaacata--tgtttgaccgtttgtcttattaa 167
Query: 80 aaaaatt 86
|||||||
Sbjct: 166 aaaaatt 160
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 222 bits (112), Expect = 2e-57
Identities = 200/227 (88%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 8 ccgtttcaaaatatttgacatcgttgactttttaa-tacgtgtttgaccattcgtcttat 66
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 67 taaaaaaatt-aagtaattatttattcttttcatatcatttgattcattgttaaatatac 125
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggtt 194
|||||||||||||||||||||||| ||||| ||| ||||| |||||||||
Sbjct: 126 tttcatgtacacatatagttttacacatttcacaaacttttttgaataatacgaacggtc 185
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagg 241
||| || | |||||||||||| |||| ||||||||| |||||||||
Sbjct: 186 aaatatttactaaaaagtcaatagtgtgaaacattttgaaacggagg 232
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| ||||| || ||||||||||||| ||||||| ||||| |||
Sbjct: 70 tttaataagacgaatggtcaaacacgtattaaaaagtcaacgatgtcaaatattttgaaa 11
Query: 236 cgg 238
|||
Sbjct: 10 cgg 8
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||||||| |||| ||||||||||| || | ||||||| ||||| ||
Sbjct: 231 ctccgtttcaaaatgtttcacactattgactttttag-taaatatttgaccgttcgtatt 173
Query: 75 attcaaaaaa 84
||||||||||
Sbjct: 172 attcaaaaaa 163
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 198/226 (87%), Gaps = 4/226 (1%)
Strand = Plus / Plus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||||||| || ||||||| | | ||||| |||||||||||||||| |||||
Sbjct: 17 aaaatgtttgacaccattaacttttttagt--gtgttcgaccattcgtcttattaaaaaa 74
Query: 84 atttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatg 142
||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 75 atttaagtaattatttattattttcatatcatttgattcattgttaaataaactttgatg 134
Query: 143 tacacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggttaaacatg 201
|||||||||| |||||| |||||| |||||||||||||||||| ||| |||
Sbjct: 135 tacacatataattttacatatttcacaattttattttaataagacgaacggtcaaatatg 194
Query: 202 tgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 195 tgctaaaaagtcaacggtatcaaacattttgaaacggagggagtat 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgataccgttgacttttta 198
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| || ||||||||||||||||||| | ||||||||
Sbjct: 42 aaaaagttaatggtgtcaaacattttaaaatgtagggagta 2
>RF01062;MIR812;AACV01009588.1/14109-13940 39947:Oryza sativa
Japonica Group
Length = 170
Score = 220 bits (111), Expect = 7e-57
Identities = 154/170 (90%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 44 ctttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattc 103
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ctttttaagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattc 111
Query: 104 ttttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgta 162
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 110 ttttcatatcatttgattcattgttaaatatactttcacgtacacatatagttttatata 51
Query: 163 tttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagt 212
|||| |||||||||||||| ||| ||||||||||||||||||
Sbjct: 50 tttcacaaattgttttaataagacgaatggtcaaacatgtgctaaaaagt 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaattt 87
||||||||||||||||||||| ||| |||||
Sbjct: 14 tgtttgaccattcgtcttattaaaacaattt 44
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 220 bits (111), Expect = 7e-57
Identities = 204/234 (87%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||||| ||||||||||| |||||| ||||||||| ||||| | |||
Sbjct: 9 tccgtttcaaaatgttagacaccgttgattttttagc-acgtgtttggtcattcatttta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|| ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 68 ttaaaaaaatttaagtaattatttattcttttaatatcatttgattcattcttaaatata 127
Query: 135 ctttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggt 193
|||||||||||||||||||||||| |||||| |||||||||| ||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcacaatttttttttaataagatgaatggt 187
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||| |||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 188 taaacatgagctaaaaagtcaacggtgacaaacattttgaaacggagggagtat 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||| |||||||||||||||| | | ||||| |||||
Sbjct: 241 atactccctccgtttcaaaatgtttgtcaccgttgactttttagct-catgtttaaccat 183
Query: 68 tcgtcttattcaaaaaa 84
|| ||||||| ||||||
Sbjct: 182 tcatcttattaaaaaaa 166
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
||||| |||||||||| ||||||||||| |||||||| |||||||
Sbjct: 53 aaacacgtgctaaaaaatcaacggtgtctaacattttgaaacgga 9
>RF01058;MIR806;AAAA02003260.1/25355-25115 39946:Oryza sativa Indica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 209/241 (86%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||| || ||||||||||| ||||||||| | ||| || ||||||||||||
Sbjct: 60 tcgtcttattctgaacatttaagtaatcatttattctgtgtatatcagttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||| ||||||||||||| ||||||||| |||||| || |||| |||
Sbjct: 120 taaatatattttcatgtacacagttagttttacatatttcacaaacaaattaaatatgac 179
Query: 187 gaacggttaaaca-tgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 180 aaacggtcaaacactgtgctaaaaagtcaaccgtgtcaaacattttaaaacagagggagt 239
Query: 246 a 246
|
Sbjct: 240 a 240
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| ||| |||| |||||||||||||| ||||||||||||
Sbjct: 240 tactccctctgttttaaaatgtttgacacggttgacttttta 199
>RF01058;MIR806;AAAA02007571.1/43599-43359 39946:Oryza sativa Indica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 191/217 (88%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||||||||| ||||| |||| | ||||||||| ||||||||| ||||||| ||||||
Sbjct: 10 ccgtttcaaaatatttgataccgataactttttaa-tacgtgtttaaccattcatcttat 68
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 69 ttaaaaaatttaagtaattatttattcttttcatatcatttgatttattgttaaatatac 128
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggtt 194
| |||||||||||||||||||||| |||||| ||| ||||||||||||| |
Sbjct: 129 tctcatgtacacatatagttttacatatttcacaaattgttttgaataagacgaacgatc 188
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||| || |||||||||||||||||||||||||||
Sbjct: 189 aaacatatgttaaaaagtcaacggtgtcaaacatttt 225
Score = 73.8 bits (37), Expect = 1e-12
Identities = 59/64 (92%), Gaps = 3/64 (4%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtcttattc 78
|||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgactttttaacata--tgtttgatcgttcgtcttattc 172
Query: 79 aaaa 82
||||
Sbjct: 171 aaaa 168
>RF01058;MIR806;AACV01005742.1/10101-9864 39947:Oryza sativa
Japonica Group
Length = 238
Score = 218 bits (110), Expect = 3e-56
Identities = 205/234 (87%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||||||||| |||||| |||||| | |||||||||||| |||| ||||
Sbjct: 8 ctccgtttcaaaatgtttgataccgttaacttttcag-tacgtgtttgactattcatctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgttaaatat 133
||| ||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||
Sbjct: 67 attaaaaaaatc-aagtagttatttattcttttcatattatttgatttattgttaaatat 125
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggt 193
| ||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 126 attttcatgtacagatatagttttacatatttc-ataatttttttaataagacgaacggt 184
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 185 taaacatgtgctaaaaagccaacggtgtcaaatattttgaaacggagggagtat 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| ||||||||||||| |||||| | || ||||| ||| |
Sbjct: 238 atactccctccgtttcaaaatatttgacaccgttggcttttt-agcacatgtttaaccgt 180
Query: 68 tcgtcttattcaaaaaatt 86
|||||||||| ||||||||
Sbjct: 179 tcgtcttattaaaaaaatt 161
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||| ||| || ||||| || || |||||| |||||| ||||||||||| |||
Sbjct: 72 tttaataagatgaatagtcaaacacgtactgaaaagttaacggtatcaaacattttgaaa 13
Query: 236 cggagggagtat 247
||||||| ||||
Sbjct: 12 cggagggcgtat 1
>RF01058;MIR806;AP008209.1/32847449-32847678 39947:Oryza sativa
Japonica Group
Length = 230
Score = 218 bits (110), Expect = 3e-56
Identities = 169/189 (89%), Gaps = 2/189 (1%)
Strand = Plus / Plus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 36 tacgtgtttgaccattcgtcttattaaaaaaattaaa-taattatttattcttttcatat 94
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 95 catttaattcattgttaaatatactttcatatacacatatagttttacatatttcatatt 154
Query: 172 nnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 155 ttttttaaataagacgaacggttaaacatgtgctaaaaagtcaatggtgtcaaatatttt 214
Query: 232 aaaacggag 240
||||||||
Sbjct: 215 gaaacggag 223
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||| ||||||||| |||||||||| | || ||||| ||| ||||||||
Sbjct: 223 ctccgtttcaaaatatttgacaccattgacttttt-agcacatgtttaaccgttcgtctt 165
Query: 75 attcaaaaaa 84
||| ||||||
Sbjct: 164 atttaaaaaa 155
>RF01058;MIR806;AAAA02018369.1/11191-11429 39946:Oryza sativa Indica
Group
Length = 239
Score = 218 bits (110), Expect = 3e-56
Identities = 211/241 (87%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||||
Sbjct: 2 tactccctccgtttcaaaatgtttcaaaccgttgactttttag-tacgtgttttaccatt 60
Query: 69 cgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||
Sbjct: 61 catcttattcaaaaaaatttaaggaattatttattcttttcatatcatttgaatcattgt 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||| ||||||||||||| || || ||| ||| |||||||
Sbjct: 121 taaatatactttcatgcacacatatagtttcacata-ttcacaaattttttttataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| |||||||||||||||| |||| ||||||||||||||| ||||| ||||||||
Sbjct: 180 gaacggtcaaacatgtgctaaaaa-tcaatggtgtcaaacattttgaaacgaagggagta 238
Query: 247 t 247
|
Sbjct: 239 t 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| ||||| || |||||||||||||||| | ||||||||| ||||||
Sbjct: 69 aataagatgaatggtaaaacacgtactaaaaagtcaacggtttgaaacattttgaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| || ||||||||||||||||||||| |||| |||| | || ||||||||| |
Sbjct: 239 atactcccttcgtttcaaaatgtttgacaccattga--tttttagcacatgtttgaccgt 182
Query: 68 tcgtcttattcaaaaaattt 87
||||||||| |||||||||
Sbjct: 181 tcgtcttataaaaaaaattt 162
>RF01058;MIR806;AC087552.3/52194-51954 39947:Oryza sativa Japonica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 209/241 (86%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| || ||||||||||| |||||||||||| |||||| | || ||||||||| ||
Sbjct: 1 atactccctacgtttcaaaatatttgacaccgttaacttttcag-tatgtgtttgacaat 59
Query: 68 tcgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattg 125
| ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| |||
Sbjct: 60 ttgtcttattcaaaaaaatttaagtaattatttattctttttatatcatttgattcgttg 119
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataaga 185
||||||||||||| ||||||||||||||||||| |||||| ||||||||||
Sbjct: 120 ttaaatatacttttatgtacacatatagttttatatatttcacaattttttttaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 180 cgaacagtctaacatgtactaaaaagtcaacggtgtcaagtattttaaaacggagggagt 239
Query: 246 a 246
|
Sbjct: 240 a 240
Score = 56.0 bits (28), Expect = 2e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| ||||||||||||||||||| | ||| |||| ||| ||
Sbjct: 240 tactccctccgttttaaaatacttgacaccgttgacttttt-agtacatgttagactgtt 182
Query: 69 cgtcttattcaaaaaa 84
||||||||| ||||||
Sbjct: 181 cgtcttattaaaaaaa 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||| |||||||||||| ||||| ||||| |||||||||
Sbjct: 41 aaaagttaacggtgtcaaatattttgaaacgtagggagtat 1
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 218 bits (110), Expect = 3e-56
Identities = 188/213 (88%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttaa-tacatgtttgatcat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattat 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||||||||||| ||||||||||||||| |||||| ||| |||||||
Sbjct: 120 taaatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacgg 218
| |||||| ||||||||| |||||||| |||||
Sbjct: 180 caaacggtcaaacatgtgttaaaaagttaacgg 212
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| | | |||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 69 aataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaatattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaattt 87
||||||||| || ||||||||||||||||||
Sbjct: 193 tgtttgaccgtttgtcttattcaaaaaattt 163
>RF01058;MIR806;AAAA02023902.1/640-883 39946:Oryza sativa Indica
Group
Length = 244
Score = 218 bits (110), Expect = 3e-56
Identities = 201/231 (87%), Gaps = 5/231 (2%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||||||||| | |||||| ||||| | ||||||||||||||| |||||||| |
Sbjct: 14 tttcaaaatgtttgaaatcgttga-tttttgagcacgtgtttgaccatttgtcttattaa 72
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaa---atatac 135
||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 73 aaaaatttaagtaattatttattcttttcgtatcatttgattcattgttaaattatatac 132
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtta 195
||||||||||||||||||||| || |||||| ||||||||||||||| | |
Sbjct: 133 tttcatgtacacatatagtttgacatatttcacaaatttttttaataagacgaacaatca 192
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||| |||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 193 aacatatgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 243
Score = 71.9 bits (36), Expect = 4e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctccgtttcaaaatgtttgacaccgttgacttttta 202
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt-aaa 234
||||||||||| || ||| ||||| ||||| |||| |||||| | ||||||||||| |||
Sbjct: 73 tttaataagacaaatggtcaaacacgtgctcaaaaatcaacgatttcaaacattttgaaa 14
Query: 235 acggagggagta 246
||||||||||||
Sbjct: 13 acggagggagta 2
>RF01058;MIR806;AAAA02002805.1/52701-52461 39946:Oryza sativa Indica
Group
Length = 241
Score = 216 bits (109), Expect = 1e-55
Identities = 199/228 (87%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 8 ctccgttttaaaatgtttgacaa-gttaactttttaaacacgtgtttgaccattcgtctt 66
Query: 75 att-caaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaata 132
||| |||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 67 attaaaaaaaaattaagtaattatttatttttttcatatcatttaattcattgttaaata 126
Query: 133 tactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacgg 192
|||||||| || |||||||| |||| ||||| |||||||||||||||||
Sbjct: 127 tactttcacatatacatatagatttatatattttacaaatttttttaataagacgaacgg 186
Query: 193 ttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggag 240
| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 187 tcaaacatgtgctaaaaagttaacggtgtcaaacattttaaaacggag 234
Score = 79.8 bits (40), Expect = 2e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||| ||||||||| |||||||||||||||||| ||||||| | || ||||||||| |
Sbjct: 241 atactttctccgttttaaaatgtttgacaccgttaacttttt-agcacatgtttgaccgt 183
Query: 68 tcgtcttattcaaaaaattt 87
|||||||||| |||||||||
Sbjct: 182 tcgtcttattaaaaaaattt 163
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttaaa 234
|||||||||||||| ||| ||||| ||| | ||||||| ||| ||||||||||||||||
Sbjct: 72 tttaataagacgaatggtcaaacacgtgtttaaaaagttaact-tgtcaaacattttaaa 14
Query: 235 acggagggagta 246
||||||| ||||
Sbjct: 13 acggaggaagta 2
>RF01058;MIR806;AAAA02035035.1/12905-13144 39946:Oryza sativa Indica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 209/240 (87%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||||||||| ||||| ||||||||||||||| ||||| ||| ||||||
Sbjct: 2 tactccctccatttcaaaatatttgataccgttgactttttag-tacgttttttaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 121 aaatatactttcatgtacacatataattttatatattt-tataatttttttaataagacg 179
Query: 188 aacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||| ||||| || | | |||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 180 aacgattaaatatatacttaaaaagttaacggtgtcaaatattttaaaacggagggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| ||| | || |||||||||||||||| ||||| ||||| |||
Sbjct: 72 tttaataagacgaatggtaaaaaacgtactaaaaagtcaacggtatcaaatattttgaaa 13
Query: 236 cggagggagta 246
||||||||||
Sbjct: 12 tggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| |||||||||||| ||||||||| || | ||| | | ||
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttaactttttaagtatatatttaatcgtt 180
Query: 69 cgtcttattcaaaaaatt 86
||||||||| ||||||||
Sbjct: 179 cgtcttattaaaaaaatt 162
>RF01058;MIR806;AC060755.9/90452-90213 4530:Oryza sativa (rice)
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||||||||| ||||| ||||||||||||||| || ||||||||||||
Sbjct: 2 tactccctccatttcaaaatatttgataccgttgactttttag-tatatgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
| ||||||| |||||||||||||||||||||||| ||| |||| |||| |||| ||||||
Sbjct: 61 catcttatttaaaaaatttaagtaattatttattttttccatatcattcgattaattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||| || ||||||||||||||||| |||||| |||||||||||
Sbjct: 121 aaatatacttttatatacacatatagttttacatatttcacaagtttttttaataagaca 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|| ||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 181 aatggtcaaacatatgctaaaaagtcaatggtgtcaaacattttaaaacggagagagtat 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 70/78 (89%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgacca 66
||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||
Sbjct: 240 atactctctccgttttaaaatgtttgacaccattgactttttagcata--tgtttgacca 183
Query: 67 ttcgtcttattcaaaaaa 84
|| |||||||| ||||||
Sbjct: 182 tttgtcttattaaaaaaa 165
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| |||||| | |||||||||||||||| ||||| ||||| ||| ||
Sbjct: 69 aataagatgaatggtcaaacatatactaaaaagtcaacggtatcaaatattttgaaatgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01058;MIR806;AACV01016852.1/644-883 39947:Oryza sativa Japonica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 209/240 (87%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||| |||||||||| ||| ||||| ||||||||||| || ||||||||||||
Sbjct: 2 tactccctcggtttcaaaatatttaacaccattgactttttag-tatgtgtttgaccata 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| ||||| |||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 61 cgtcttatttaaaaattttaagtaattatttatt-ttttcatatcatttaattcattgtt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
|||||||||||||| ||| ||||||||||||| |||||| ||| ||||||||
Sbjct: 120 aaatatactttcatatacgcatatagttttacatatttcataaattcttttgaataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 gaacggtcaaatatatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/75 (88%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgaccat 67
||||| |||||||| ||||| ||||||||||||||||||||| ||| | ||||||| |
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttgactttttagcata--tatttgaccgt 182
Query: 68 tcgtcttattcaaaa 82
|||||||||||||||
Sbjct: 181 tcgtcttattcaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||| | ||| ||||| | |||||||||||| ||||| ||| ||||| |||| |
Sbjct: 69 aataagacgtatggtcaaacacatactaaaaagtcaatggtgttaaatattttgaaaccg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01058;MIR806;AP008209.1/3514325-3514566 39947:Oryza sativa
Japonica Group
Length = 242
Score = 216 bits (109), Expect = 1e-55
Identities = 206/238 (86%), Gaps = 5/238 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagc-acgtgtttaacaat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||| || || |||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 60 tcgttttttttaaaaaaattaagtaattatttattcttttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttc---nnnnnnnnntttaataa 183
||||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 120 taaatatactttcatgtacacatatagttttacatatttcataaaaaaaaatttgaataa 179
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagg 241
|||||| ||| |||||||| ||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 180 gacgaatggtcaaacatgttctaaaaaatcaacagtgtcaaatattttgaaacggagg 237
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 192 gttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 56 gttaaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||| |||||||| ||||| |||||| | || ||||||||||||||||||
Sbjct: 236 ctccgtttcaaaatatttgacactgttgattttttaga-acatgtttgaccattcgtctt 178
Query: 75 attcaaa 81
|||||||
Sbjct: 177 attcaaa 171
>RF01058;MIR806;AL606588.4/5999-5762 4530:Oryza sativa (rice)
Length = 238
Score = 214 bits (108), Expect = 5e-55
Identities = 209/239 (87%), Gaps = 6/239 (2%)
Strand = Plus / Plus
Query: 11 ctctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcg 70
|||||||||||||||||||||||||||| | ||||||| |||||||||||||||| |
Sbjct: 4 ctctctccgtttcaaaatgtttgacaccactt--tttttaagtacgtgtttgaccatttg 61
Query: 71 tcttattcaaaaaatt-taagtaattatttattcttttcatac-atttgattcattgtta 128
||||||| |||||| |||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 62 tcttatttaaaaaaaactaagtaattatttattttttt-atattatttgattcattgtta 120
Query: 129 aatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacga 188
|||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 121 aatatactttcatgtacacatatagttttatatatttc-acaatttttttaataagacga 179
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||| |||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 180 acggtcaaacatatgctaaaaagtcaacggtgtcaaatattttgaaacggagggagtat 238
Score = 81.8 bits (41), Expect = 4e-15
Identities = 72/80 (90%), Gaps = 3/80 (3%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgacca 66
|||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||
Sbjct: 238 atactccctccgtttcaaaatatttgacaccgttgactttttagcata--tgtttgaccg 181
Query: 67 ttcgtcttattcaaaaaatt 86
||||||||||| ||||||||
Sbjct: 180 ttcgtcttattaaaaaaatt 161
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 214 bits (108), Expect = 5e-55
Identities = 198/227 (87%), Gaps = 3/227 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||| |||||||||||||||||| |||||| |||||||||| |||||||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaacttttaaaatacgtgtgtgaccat 60
Query: 68 tcgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattg 125
|||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 tcgtcttattaaaaaaattttgagtaattatttattcttttcatatcatttgattcattg 120
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataag 184
||||||||| ||||||| | ||||||||||||| |||||| ||||||||
Sbjct: 121 ttaaatatattttcatgcatacatatagttttatatatttcacagattttttttaataat 180
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct: 181 acgaacggtcaaacatgtgttaaaaagtcaacggtgttaaacatttt 227
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||| |||||||||||||||||||||| |||||||||||
Sbjct: 41 aaaagttaacggtgtcaaacattttaaaatggagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaa-tgtttgacaccgttgactttttaaatacgtgtttgaccattcgtct 73
||||||||||||| ||||| |||||||||||||||| || || ||||||||| ||||| |
Sbjct: 237 ctccgtttcaaaaatgtttaacaccgttgacttttt-aacacatgtttgaccgttcgtat 179
Query: 74 tattcaaaaaa 84
|||| ||||||
Sbjct: 178 tattaaaaaaa 168
>RF01058;MIR806;AP008214.1/26299851-26300093 39947:Oryza sativa
Japonica Group
Length = 243
Score = 214 bits (108), Expect = 5e-55
Identities = 180/203 (88%), Gaps = 3/203 (1%)
Strand = Plus / Plus
Query: 40 ttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattt 99
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ttgactttttag-tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattt 93
Query: 100 attcttttcata-catttgattcattgttaaatatactttcatgtacacatatagtttta 158
|||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 94 attcttttcatatcatttgattcattgttaaatatacttctatgtatacatatagcttta 153
Query: 159 cgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacg 217
| |||||| ||| |||||||| || ||| |||||| || |||||||||||||
Sbjct: 154 catatttcataaaattttttaaataagacaaatggtcaaacatatgttaaaaagtcaacg 213
Query: 218 gtgtcaaacattttaaaacggag 240
|||||||||||||||||||||||
Sbjct: 214 gtgtcaaacattttaaaacggag 236
Score = 93.7 bits (47), Expect = 1e-18
Identities = 72/78 (92%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 11 ctctctccgtttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattc 69
|||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 240 ctctctccgttttaaaatgtttgacaccgttgactttttaacata--tgtttgaccattt 183
Query: 70 gtcttattcaaaaaattt 87
|||||||| |||||||||
Sbjct: 182 gtcttatttaaaaaattt 165
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 212 bits (107), Expect = 2e-54
Identities = 157/174 (90%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 42 gactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttat 101
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 174 gactttttaagtacgtgtttgaccattcgtcttattcaaaaattttaagtaattatttat 115
Query: 102 tcttttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacg 160
|||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 114 tcttttcatatcatttgattcattattaaatatactttcacgtacacatatagttttaca 55
Query: 161 tatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtc 213
|||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 54 tatttcataaaattttttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaattt 87
||||||||| |||||||||||||||||||||
Sbjct: 15 tgtttgaccgttcgtcttattcaaaaaattt 45
>RF01058;MIR806;AAAA02018287.1/668-427 39946:Oryza sativa Indica
Group
Length = 242
Score = 212 bits (107), Expect = 2e-54
Identities = 149/159 (93%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||||||||| |||||||| ||||||| || |||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttga-accgttgattttttaa-tatgtgtttgaccatt 59
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 60 cgtcttattaaaaaaaattaagtaattatttattattttcatatcatttgattcattgtt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtatttc 166
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 120 aaatatactttcatgtacacatatagttttacatatttc 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| ||||| | |||||| |||||||| ||||||||||| |||
Sbjct: 71 tttaataagacgaatggtcaaacacatattaaaaaatcaacggt-tcaaacattttgaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 203/234 (86%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||||||||||| || | ||||||| ||| ||||||||||||| |||||
Sbjct: 9 tccgtttcaaaatgtttgacactattaa-tttttaagtacatgtttgaccattcatctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|| |||||| | |||||||||||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 68 ttaaaaaaaatcaagtaattatttattcctttcatatcatttgattcattattaaatata 127
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggt 193
|||||| |||||| |||||||||| |||||| ||| |||||||||||||||
Sbjct: 128 ttttcatatacacacatagttttacatatttcacaaatatttttgaataagacgaacggt 187
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 188 caaacatgtgctaaaaagtcaacggtgtcaaatattttaaaatagagggagtat 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 225 aaaatatttgacaccgttgactttttagc-acatgtttgaccgttcgtcttattcaaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||| ||| ||| |||||||| || |||| | || |||||||||||||| |||
Sbjct: 72 tttaataagatgaatggtcaaacatgtacttaaaaattaatagtgtcaaacattttgaaa 13
Query: 236 cgga 239
||||
Sbjct: 12 cgga 9
>RF01058;MIR806;AAAA02007631.1/1078-840 39946:Oryza sativa Indica
Group
Length = 239
Score = 210 bits (106), Expect = 7e-54
Identities = 195/225 (86%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| |||||||||||||| |||| || ||||||||| ||||| |||||| ||
Sbjct: 1 atactccctctgtttcaaaatgtttaacactattaactttttaagtacgtatttgactat 60
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||| ||||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||
Sbjct: 61 tcgttttattcaaaaa-tttaagtaattatttatactttttatatcatttgaatcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 120 taaatatactttcatgtacacatatagttttacatatttcataattttttttaataagat 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||| ||| || || |||||||||||||||||||||||||||
Sbjct: 180 gaacggtcaaatatatgttaaaaagtcaacggtgtcaaacatttt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 21 ttcaaaatgtttgacaccgttgactttttaa 51
|||||||||||||||||||||||||||||||
Sbjct: 227 ttcaaaatgtttgacaccgttgactttttaa 197
>RF01058;MIR806;AP003432.2/54591-54357 39947:Oryza sativa Japonica
Group
Length = 235
Score = 210 bits (106), Expect = 7e-54
Identities = 182/209 (87%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 32 tgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagt 91
|||||| ||| ||||||||| |||||||| ||||||||||||||| |||||| ||||||
Sbjct: 21 tgacacagttaactttttaagcacgtgtttaaccattcgtcttattaaaaaaaattaagt 80
Query: 92 aattatttattcttttcata-catttgattcattgttaaatatactttcatgtacacata 150
||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 81 aattatttatttttttcatatcatttaatttattgttaaatatactttcatgtatacata 140
Query: 151 tagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaa 210
||| ||||| ||||| ||||||||||||||| |||||||||||||| ||||
Sbjct: 141 tagatttacatattttacaaatttttttaataagacgaacagttaaacatgtgctgaaaa 200
Query: 211 gtcaacggtgtcaaacattttaaaacgga 239
|| ||||||||||||||||||||||||||
Sbjct: 201 gttaacggtgtcaaacattttaaaacgga 229
Score = 50.1 bits (25), Expect = 2e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtca 223
|||||||||||||| ||||||||| |||| |||||||| ||| ||||||
Sbjct: 69 tttaataagacgaatggttaaacacgtgcttaaaaagttaactgtgtca 21
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttt 48
||||||| |||||||||||||||||| ||||||
Sbjct: 229 tccgttttaaaatgtttgacaccgttaactttt 197
>RF01058;MIR806;AAAA02018250.1/70399-70160 39946:Oryza sativa Indica
Group
Length = 240
Score = 210 bits (106), Expect = 7e-54
Identities = 203/233 (87%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgactttttag-tacgtgtttaaccattcgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|| |||||||| |||||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 68 ttaaaaaaatt-aagtaactatttattctttttatatcatttgattcattgttaaatata 126
Query: 135 ctttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggt 193
|||| |||||||||||||||||||| |||||| |||| |||||||||| ||
Sbjct: 127 cttttatgtacacatatagttttacatatttcgcaaattttttttattaagacgaacagt 186
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||| ||||||| | ||| |||||| ||||||||||||||
Sbjct: 187 caaacatgtgctaaaacgtcaacgataccaaccattttgaaacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||||||||| || |||||||||||||||||||||| ||||| |||
Sbjct: 72 tttaataagacgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttgaaa 13
Query: 236 cggagggagta 246
|||| ||||||
Sbjct: 12 cggatggagta 2
>RF01062;MIR812;AACV01023217.1/3751-3923 39947:Oryza sativa Japonica
Group
Length = 173
Score = 206 bits (104), Expect = 1e-52
Identities = 148/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 163 tacgtgtttaaccattcgtcttattcaaaaaatttaagtaattatttatttttttcatat 104
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 103 catttgattcattgttaaatatactttcatgtacacatatagttttacatatttcaaaaa 44
Query: 172 nnnnttt-aataagacgaacggttaaacatgtgctaaaaagtc 213
||| ||||||||||||||| |||||||||||||||||||
Sbjct: 43 aaaatttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||| ||||||||| || ||||||||||
Sbjct: 139 aataagacgaatggttaaacacgtactaaaaagtc 173
>RF01058;MIR806;AP008211.1/4813545-4813786 39947:Oryza sativa
Japonica Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 202/232 (87%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaa-tacgtgtttgaccattcgtcttatt 77
|||||||||||||||||||| |||| |||||||| ||||||||| |||||| ||||||||
Sbjct: 12 gtttcaaaatgtttgacaccattgattttttaaagtacgtgtttcaccatttgtcttatt 71
Query: 78 caaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatact 136
||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 72 taaaaaatttaagtaattattttttcttttcatatcatttgattcatcgttaaatatact 131
Query: 137 ttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaa 196
||||| || | |||||||||||| |||||| |||||||||||||| ||| ||
Sbjct: 132 ttcatatatatatatagttttacatatttc-acattttttttaataagacgaatggtcaa 190
Query: 197 acatgtgctaaaa-agtcaacggtgtcaaacattttaaaacggagggagtat 247
|||| |||||||| | ||||||||||||||||||| |||||| ||||||||
Sbjct: 191 acatatgctaaaataatcaacggtgtcaaacatttcgaaacggtgggagtat 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| | ||||||| ||||||||||||||||||| | ||| | | |||||||||||
Sbjct: 242 atactcccaccgtttcgaaatgtttgacaccgttgattattttagcatatgtttgaccat 183
Query: 68 tcgtcttattcaaaaaa 84
|||||||||| ||||||
Sbjct: 182 tcgtcttattaaaaaaa 166
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 206 bits (104), Expect = 1e-52
Identities = 203/235 (86%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| | |||||||||||| ||||| |||||||||| ||||| ||| |||||||||||
Sbjct: 1 atactccccccgtttcaaaatatttgaaaccgttgactgtttaa-tacatgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 60 ttgtcttatttaaaaagtttaagtaattatttattcttttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||| ||| ||| ||| ||||| |||||| |||||| ||| |||||||
Sbjct: 120 taaatatatttttatgcacatatataattttacatatttcacaaaaaattttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggag 240
|||| ||| ||| ||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 180 cgaatggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggag 234
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgactttttagc-acatatttgaccattcgtctt 176
Query: 75 attcaaaa 82
||||||||
Sbjct: 175 attcaaaa 168
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 204/235 (86%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| |||||||||||||||||| ||||||||||| || ||||||||| ||||||||
Sbjct: 8 ctccatttcaaaatgtttgacactattgactttttagc-acatgtttgaccgttcgtctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
|||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 67 attcaaaaaatttaagtaattatttattattttcatatcatttgattcattattaaatat 126
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacgg 192
|||||||| ||||||||||||||||| |||||| ||| |||||||| || ||
Sbjct: 127 actttcatctacacatatagttttacatatttcataaaattttttgaataagacaaatgg 186
Query: 193 ttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
| |||||||| | ||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 187 tcaaacatgtacttaaaaagtcaacggtgtcaaatattttgaaacagagggagta 241
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 241 tactccctctgtttcaaaatatttgacaccgttgactttttaagtacatgtttgaccatt 182
Query: 69 cgtcttattcaaaaaattt 87
||||||||||||||||||
Sbjct: 181 tgtcttattcaaaaaattt 163
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||
Sbjct: 69 aataagacgaacggtcaaacatgtgctaaaaagtcaatagtgtcaaacattttgaaatgg 10
Query: 239 aggga 243
|||||
Sbjct: 9 aggga 5
>RF01058;MIR806;AC105928.2/57418-57177 39947:Oryza sativa Japonica
Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 208/242 (85%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||| ||||| || |||||||| | ||||||| ||||||||||||||||
Sbjct: 2 tactccctccgttttaaaatattgcacaccgttaattttttaa-tacgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
| ||||||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 61 catcttatttaaaaaatttaagcaattatttattcttttcatatcatttaattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttta--ataaga 185
|||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcataattttttttaatataaga 180
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||| || |||||| | |||||||||||| |||||||| ||||| |||| ||||||||
Sbjct: 181 cgaacagtcaaacatatattaaaaagtcaacagtgtcaaatattttgaaacagagggagt 240
Query: 246 at 247
||
Sbjct: 241 at 242
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| |||||||||| |||||||| ||||||||||| |||| |||||||| |
Sbjct: 242 atactccctctgtttcaaaatatttgacactgttgacttttt-aatatatgtttgactgt 184
Query: 68 tcgtcttat 76
|||||||||
Sbjct: 183 tcgtcttat 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| ||||| || |||||| | |||||||| || ||||||||||||
Sbjct: 69 aataagatgaatggtcaaacacgtattaaaaaattaacggtgtgcaatattttaaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01062;MIR812;AP008217.1/21142327-21142498 39947:Oryza sativa
Japonica Group
Length = 172
Score = 204 bits (103), Expect = 4e-52
Identities = 146/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattattttcatat 103
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
||||||||||||||||||||||||||| || |||||||||| |||||| ||||||
Sbjct: 102 catttgattcattgttaaatatacttttatatacacatataattttacatatttcacaaa 43
Query: 172 nnnntttaataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||||||||||| |||||||||||||||||||
Sbjct: 42 tttttttaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaattt 87
||||||||| ||||||||||| |||||||||
Sbjct: 15 tgtttgaccgttcgtcttattaaaaaaattt 45
>RF01058;MIR806;AAAA02018392.1/9429-9624 39946:Oryza sativa Indica
Group
Length = 196
Score = 204 bits (103), Expect = 4e-52
Identities = 164/183 (89%), Gaps = 3/183 (1%)
Strand = Plus / Plus
Query: 40 ttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattt 99
|||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 11 ttgactttttaac-acgtgtttgaccattcgtcttgtttaaaaaatttaagtaattattt 69
Query: 100 attcttttcata-catttgattcattgttaaatatactttcatgtacacatatagtttta 158
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 70 attcttttcatatcatttgattcattgttaaatatactttcatatacacatatagtttta 129
Query: 159 cgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacgg 218
| |||||| |||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 130 catatttc-ataaattttttaataagacgaaaggtcaaatatgtgctaaaaagtcaacgg 188
Query: 219 tgt 221
|||
Sbjct: 189 tgt 191
>RF01058;MIR806;AAAA02036553.1/4131-3892 39946:Oryza sativa Indica
Group
Length = 240
Score = 204 bits (103), Expect = 4e-52
Identities = 206/238 (86%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| |||||||||| ||||||| |||| ||||||| |||||||||||||||
Sbjct: 1 atactccctctgtttcaaaatatttgacatcgttaactttttgg-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||
Sbjct: 60 ttatcttattcaaaaaatttaaataattatttattcttttcatatcatttgatttattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
||||||||||||||| ||||||| ||||||||| |||||| ||| |||||||
Sbjct: 120 taaatatactttcatatacacatgtagttttacatatttcaccaacttttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
||||| || ||| ||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 180 cgaacagtcaaagatgtgctaaaaagtcaacggtatcaaaca-tttgaaacggaggga 236
Score = 52.0 bits (26), Expect = 4e-06
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||| ||||||| ||||||||||||||| || | |||||| ||||||||
Sbjct: 233 ctccgtttcaaa-tgtttgataccgttgactttttagc-acatctttgactgttcgtctt 176
Query: 75 attcaaaaaa 84
||||||||||
Sbjct: 175 attcaaaaaa 166
>RF01058;MIR806;AAAA02006724.1/5899-5657 39946:Oryza sativa Indica
Group
Length = 243
Score = 204 bits (103), Expect = 4e-52
Identities = 209/244 (85%), Gaps = 5/244 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||| |||| ||||||||| || |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttaacactgttgactttctag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatt---taagtaattatttattcttttcata-catttgattcat 123
|||||||||||||||| || ||| |||||| ||||| |||| ||| ||||||||| ||
Sbjct: 60 tcgtcttattcaaaaatttaattaattaattaattattttttttatatcatttgatttat 119
Query: 124 tgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataa 183
|||||||| ||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 120 tgttaaatgtactttcatgtacacatatagttttacatattttacaattttttttaataa 179
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||||| |||| |||||||||||||||||||||||||| |||| ||| | |||||
Sbjct: 180 gacgaacggtcaaacctgtgctaaaaagtcaacggtgtcaaatatttcgaaatgaaggga 239
Query: 244 gtat 247
||||
Sbjct: 240 gtat 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || ||| ||||||||| |||| ||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactagaaagtcaacagtgttaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
|||| |||| |||||||||||||||||||| | || |||||||| ||||||||||| |
Sbjct: 231 tttcgaaatatttgacaccgttgacttttt-agcacaggtttgaccgttcgtcttattaa 173
Query: 80 aaaaa 84
|||||
Sbjct: 172 aaaaa 168
>RF01062;MIR812;AP005756.3/134331-134500 39947:Oryza sativa Japonica
Group
Length = 170
Score = 202 bits (102), Expect = 2e-51
Identities = 151/169 (89%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 tttttaagtacgtgtttgaccattcgtcttattaaaaaaatttaagtaattatttattct 110
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 109 tttcatatcatttgattcatcgttaaatatactttcatgtatacatatagttttacatat 50
Query: 164 ttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagt 212
|| |||||||||||||||||| |||||| |||||||||||
Sbjct: 49 ttaacaattttttttaataagacgaacggtcaaacatatgctaaaaagt 1
>RF01058;MIR806;AP008211.1/2299532-2299770 39947:Oryza sativa
Japonica Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 197/228 (86%), Gaps = 9/228 (3%)
Strand = Plus / Plus
Query: 18 cgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttatt 77
||||||||||| ||| ||||||||||||||| | || || ||||||||||||| |||||
Sbjct: 15 cgtttcaaaatattttacaccgttgacttttcag-tatgtatttgaccattcgttttatt 73
Query: 78 caaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatact 136
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 caaaaaat------aattatttattcttttcatatcatttgattcattgttaaatatact 127
Query: 137 ttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggtta 195
||||||||||||||||||||||| |||||| ||| ||||||||||| | | |
Sbjct: 128 ttcatgtacacatatagttttacatatttcacaaattattttgaataagacgaatgatca 187
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 188 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggaggga 235
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| |||||||||||||||||||||||||||||| | || ||||||| ||||||||||
Sbjct: 232 ctccatttcaaaatgtttgacaccgttgacttttt-agcacatgtttgatcattcgtctt 174
Query: 75 attcaaaa 82
||||||||
Sbjct: 173 attcaaaa 166
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||||||||||| ||| ||||| ||||| ||||||
Sbjct: 45 aaaagtcaacggtgtaaaatattttgaaacgaagggag 8
>RF01058;MIR806;AAAA02007628.1/21696-21454 39946:Oryza sativa Indica
Group
Length = 243
Score = 202 bits (102), Expect = 2e-51
Identities = 197/226 (87%), Gaps = 4/226 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| |||||||| ||| |||| ||| || || |||||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacactgttaacttgttag-tatgtatttgaccat 59
Query: 68 tcgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||| ||||
Sbjct: 60 tcgtcttattcaaaaaaatttaagtaattatttatacttctcatatcatttgatttattg 119
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataaga 185
|||||||||||||||| ||||||||||||||||| |||||| ||||||||||
Sbjct: 120 ttaaatatactttcatatacacatatagttttacatatttc-atattttttttaataaga 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||||| |||||| || |||||| ||||||||||||||||||||
Sbjct: 179 cgaacggtcaaacatatgttaaaaaatcaacggtgtcaaacatttt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 56/62 (90%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 24 aaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtcttattcaaaa 82
|||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||
Sbjct: 224 aaaatgtttgacaccgttgattttttaacata--tgtttgaccgttcgtcttattaaaaa 167
Query: 83 aa 84
||
Sbjct: 166 aa 165
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||| | | |||| |||| ||| |||||||| ||||| ||||||
Sbjct: 69 aataagacgaatggtcaaatacatactaacaagttaacagtgtcaaatattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AAAA02007632.1/1496-1239 39946:Oryza sativa Indica
Group
Length = 258
Score = 202 bits (102), Expect = 2e-51
Identities = 173/197 (87%), Gaps = 2/197 (1%)
Strand = Plus / Plus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 62 tacgtgtttgaccattcgtcttattcaaaaaatttaaataattatttatttttttcatat 121
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
|||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||
Sbjct: 122 catttgattcattgttaaatatactttcatatacacatatggttttacatatttcacaaa 181
Query: 172 nnnntttaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattt 230
|||||||||||||||||| |||||| | | |||||||||||| || ||||| ||||
Sbjct: 182 attttttaataagacgaacggtcaaacatatacttaaaaagtcaacagtatcaaatattt 241
Query: 231 taaaacggagggagtat 247
| |||||||| ||||||
Sbjct: 242 tgaaacggagagagtat 258
Score = 87.7 bits (44), Expect = 7e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||||||||||||||||| ||||| || ||||||||||||| || ||||||||| |
Sbjct: 258 atactctctccgtttcaaaatatttgatactgttgactttttaagtatatgtttgaccgt 199
Query: 68 tcgtcttattcaaaaa 83
|||||||||| |||||
Sbjct: 198 tcgtcttattaaaaaa 183
>RF01058;MIR806;AAAA02033862.1/6052-6288 39946:Oryza sativa Indica
Group
Length = 237
Score = 200 bits (101), Expect = 7e-51
Identities = 207/241 (85%), Gaps = 7/241 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||| |||| ||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 2 tactccctccgttacaaactgtttgacaccgttgacttcttag-tacgtgttttaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| ||||| |||||| ||||||||||||||||||||| | ||||||||||||||||
Sbjct: 61 cgttttattaaaaaaa----agtaattatttattcttttcaaatcatttgattcattgtt 116
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
|||||||||||||||||||||||||||||||| | |||| ||| ||||||||
Sbjct: 117 aaatatactttcatgtacacatatagttttacatgtttcacaaacttttttgaataagac 176
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| |||||||||||||||||| || ||||||||| ||||| ||| |||||||||
Sbjct: 177 gaacggtcaaacatgtgctaaaaagttaatggtgtcaaatattttgaaatagagggagta 236
Query: 247 t 247
|
Sbjct: 237 t 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||| ||||| ||| ||||| || |||| ||||||||||||||||||| ||| ||
Sbjct: 72 tttaataaaacgaatggtaaaacacgtactaagaagtcaacggtgtcaaacagtttgtaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||| ||||||||| || |||||||| || ||||||||| |||||||||||||
Sbjct: 225 tttcaaaatatttgacaccattaactttttagc-acatgtttgaccgttcgtcttattca 167
Query: 80 aaaaa 84
|||||
Sbjct: 166 aaaaa 162
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa Indica
Group
Length = 250
Score = 200 bits (101), Expect = 7e-51
Identities = 184/214 (85%), Gaps = 13/214 (6%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 39 tttttaagtacgtgtttgaccattcgtcttattaaaaaa--ttaagtaattatttattct 96
Query: 105 tttcata----------catttgattcattgttaaatatactttcatgtacacatatagt 154
||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 97 tttcatatcatttgattcatttgattcattgttaaatatactttcatgtacacgtatagt 156
Query: 155 tttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtc 213
||||| |||||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct: 157 tttacatatttcaagaattttttttaataagacgaacagttaaacatgtgctaaaaagtc 216
Query: 214 aacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||| ||| | |||||||||
Sbjct: 217 aacggtgtcaaacattttgaaatgaagggagtat 250
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgacttttta 50
|||||||||||||||||||||||||||||||
Sbjct: 238 tttcaaaatgtttgacaccgttgacttttta 208
>RF01058;MIR806;AAAA02005403.1/7906-8143 39946:Oryza sativa Indica
Group
Length = 238
Score = 198 bits (100), Expect = 3e-50
Identities = 139/147 (94%), Gaps = 5/147 (3%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttggctttt-aattacgtgtttgaccat 59
Query: 68 tcgtcttattc--aaaaaatttaagtaattatttattcttttcata-catttgattcatt 124
||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 60 tcgtcttattctaaaaaaatttaagtaattatttattctttt-atatcatttgattcatt 118
Query: 125 gttaaatatactttcatgtacacatat 151
|||||||||||||||||||||||||||
Sbjct: 119 gttaaatatactttcatgtacacatat 145
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || | ||||| ||||||||||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtaattaaaagccaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactt 46
|||||| |||||||||||||||||| |||| ||||||||
Sbjct: 238 atactccctccgtttcaaaatgtttaacactgttgactt 200
>RF01058;MIR806;AP008207.1/25048910-25049151 39947:Oryza sativa
Japonica Group
Length = 242
Score = 198 bits (100), Expect = 3e-50
Identities = 208/241 (86%), Gaps = 8/241 (3%)
Strand = Plus / Plus
Query: 12 tctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgt 71
||||||||||| |||||||||||||||||||| |||| | ||||| ||||||||||| |
Sbjct: 5 tctctccgttttaaaatgtttgacaccgttgattttt--agtacgtctttgaccattcat 62
Query: 72 cttattcaaaaaa---tttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||
Sbjct: 63 cttattcaaaaaaaaatttaagtagttatttattcttttcatatcatttgatttattgtt 122
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 123 aaatatactttcatgtacacatatagttttatatatttc-acaatttttttaataaggtg 181
Query: 188 aacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| || |||||||||| |||||| ||||| |||||||||||||| ||| ||||||||||
Sbjct: 182 aacagtcaaacatgtgcttaaaaaatcaactgtgtcaaacattttgaaatggagggagta 241
Query: 247 t 247
|
Sbjct: 242 t 242
Score = 61.9 bits (31), Expect = 4e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| |||||||||||||||||| ||||| ||||||| || |||||||| |
Sbjct: 242 atactccctccatttcaaaatgtttgacacagttgattttttaagcacatgtttgactgt 183
Query: 68 tcgtcttattcaaaaaatt 86
|| |||||| ||||||||
Sbjct: 182 tcaccttattaaaaaaatt 164
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggag 240
|||| |||||||||||||||||||||||||||||
Sbjct: 41 aaaaatcaacggtgtcaaacattttaaaacggag 8
>RF01058;MIR806;AP005190.3/32973-32734 39947:Oryza sativa Japonica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 207/241 (85%), Gaps = 6/241 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||| ||||||||||||||||||||||| | ||| || | ||||||| ||||||
Sbjct: 2 tactccctctgtttcaaaatgtttgacaccgttaattttgtag-tgcgtgttttaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattacttattcttctcatatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt--aataaga 185
||||||| |||||||||||| |||||| || |||||| ||| |||||||
Sbjct: 121 aaatatattttcatgtacac--atagttgtatatatttcataaattttttttaaataaga 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||| || |||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 179 cgaacagtcaaacatgtgctaaagagtcaacggtgtcaaacattttgaaacggagggagt 238
Query: 246 a 246
|
Sbjct: 239 a 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||||||| ||| | || |||||||| ||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactcttt-agcacatgtttgactgtt 181
Query: 69 cgtcttattcaaaaaa 84
||||||||| ||||||
Sbjct: 180 cgtcttatttaaaaaa 165
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| ||||| | ||| ||| | |||||||||||||||||| |||
Sbjct: 72 tttaataagacgaatggtaaaacacgcactacaaaattaacggtgtcaaacattttgaaa 13
Query: 236 cggagggagta 246
| |||||||||
Sbjct: 12 cagagggagta 2
>RF01058;MIR806;AAAA02034792.1/4708-4947 39946:Oryza sativa Indica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 210/243 (86%), Gaps = 6/243 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1 atactctctccatttcaaa-tgtttgacaccgttgactttttag-tacgtgtttgatcat 58
Query: 68 tcgtcttattcaaaaaa-tttaagtaattatttattcttttcatacatttgattcattgt 126
|| |||||||||||||| |||||||||||||||||| |||| |||||| ||| ||||
Sbjct: 59 tcatcttattcaaaaaaatttaagtaattatttattattttatgtcatttggttcgttgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 119 taaatatactttcatgtacacatatagttttacatatttc-acaaaatttttaataagac 177
Query: 187 gaacggttaaacatgtgctaaaaagtcaac--ggtgtcaaacattttaaaacggagggag 244
|| |||| |||||||||||||||| ||||| ||||||| |||||| || |||||||||
Sbjct: 178 gagcggtcaaacatgtgctaaaaaatcaacagagtgtcaatcattttgaaccggagggag 237
Query: 245 tat 247
|||
Sbjct: 238 tat 240
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||| || |||||||||||||||||||||||||||
Sbjct: 52 aaacacgtactaaaaagtcaacggtgtcaaacattt 17
>RF01058;MIR806;AAAA02007627.1/1870-2109 39946:Oryza sativa Indica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 203/235 (86%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||| |||| |||| |||| |||||| ||||||||||||||||||| ||
Sbjct: 8 ctccgtttcaaaatatttggcaccattgattttttag-tacgtgtttgaccattcgtatt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||| ||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 67 att-aaaaaattttagtgattatttattcttttcatatcatttgattcattattaaatat 125
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggt 193
||||| |||||||||||||||||||| |||||| ||||||||||| |||| |
Sbjct: 126 acttttatgtacacatatagttttacatatttcacaaatttttttaataagacaaacgat 185
Query: 194 taaacatgtg-ctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||| |||||| | |||||||| ||||||||| ||||||| |||||||
Sbjct: 186 taaacatgtgtttaaaaaataaacggtgttaaacattttgaaacggaaggagtat 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||||||| |||||||| | |||||||| || ||||| | | || ||||||
Sbjct: 232 tccgtttcaaaatgtttaacaccgtttattttttaaacacatgtttaatcgtttgtctta 173
Query: 76 ttcaaaaaattt 87
|| |||||||||
Sbjct: 172 ttaaaaaaattt 161
>RF01062;MIR812;CR855113.1/22090-22258 4530:Oryza sativa (rice)
Length = 169
Score = 196 bits (99), Expect = 1e-49
Identities = 147/162 (90%), Gaps = 3/162 (1%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 160 tacgtgtttgaccattcgtcttattcaaaaa-tttaagtaattatttattcttttcatat 102
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 101 catttgattcattgttaaatatac-ttcatgtacacatatagttttacatatttcacaaa 43
Query: 172 nnnntttaataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||| ||||||| |||||||||||||||||||
Sbjct: 42 tttttttaataagatgaacggtcaaacatgtgctaaaaagtc 1
>RF01058;MIR806;ABRL01001931.1/4966-5201 65489:Oryza barthii
Length = 236
Score = 196 bits (99), Expect = 1e-49
Identities = 207/242 (85%), Gaps = 8/242 (3%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| || ||||||||||||||| | || || | |||||||| |||
Sbjct: 1 atactccctccgttttaatatgtttgacaccgttaatttcttt--ttagtgtttgatcat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||| |||||| || ||||||||| |||||||| |||||||||||||||
Sbjct: 59 tcgtcttattcaaaatatttaattatttatttatttttttcatatcatttgattcattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
||||||||||||||||||||||||||||||||| |||||| ||| |||||||
Sbjct: 119 taaatatactttcatgtacacatatagttttacatatttcacaaaaaaatttaaataaga 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 179 cgaatggt----catatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagt 234
Query: 246 at 247
||
Sbjct: 235 at 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 236 atactccctccgttttaaaatatttgacaccgttgacttttta 194
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 214 aacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||| ||||||||||||||||||
Sbjct: 34 aacggtgtcaaacatattaaaacggagggagtat 1
>RF01058;MIR806;AAAA02017322.1/13807-13568 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 193/225 (85%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||| |||| ||||||||| ||||||||| || || ||||| |||||||||||||
Sbjct: 9 tccgtttctaaatatttgacaccattgacttttctaa-acatgtttaaccattcgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||
Sbjct: 68 ttaaaaaaaattaagtaattattaattcttttcatatcatttgattcatagttaaatata 127
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtt 194
||||||||| |||||||||||||| |||||| ||||||||| |||||||
Sbjct: 128 ttttcatgtatacatatagttttacatatttcacaaaaaaaattaataagatgaacggtc 187
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
|||||||||||||||| |||||||||||||| |||| |||||||
Sbjct: 188 aaacatgtgctaaaaaatcaacggtgtcaaatatttagaaacgga 232
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| |||||||||||| ||||||||| ||||||||| |||| |||
Sbjct: 72 tttaataagacgaatggttaaacatgtttagaaaagtcaatggtgtcaaatatttagaaa 13
Query: 236 cgga 239
||||
Sbjct: 12 cgga 9
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||| |||| |||||||||||||| ||||||
Sbjct: 232 tccgtttctaaatatttgacaccgttgatttttta 198
>RF01058;MIR806;AAAA02025783.1/3210-3453 39946:Oryza sativa Indica
Group
Length = 244
Score = 194 bits (98), Expect = 4e-49
Identities = 136/146 (93%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaa-tacgtgtttgaccattcgtct 73
|||||||| ||||| |||||||||||| ||||||| || |||||||||||||||| |||
Sbjct: 8 ctccgttttaaaatatttgacaccgttaacttttttaagtacgtgtttgaccatttatct 67
Query: 74 tattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaata 132
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 68 tattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaata 127
Query: 133 tactttcatgtacacatatagtttta 158
|| |||||||||||||||| ||||||
Sbjct: 128 tattttcatgtacacatatggtttta 153
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggaggga 243
||||||| |||||||||||| |||||||||||||||||
Sbjct: 42 aaaaagttaacggtgtcaaatattttaaaacggaggga 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||| | || |||||||| ||||||||||| | | ||| || ||||||||| ||
Sbjct: 243 tactctctcagctttaaaatgttcgacaccgttgattatctaagcacatgtttgaccgtt 184
Query: 69 cgtcttattcaaaaaattt 87
|| ||||| |||||||||
Sbjct: 183 tgttttatttaaaaaattt 165
>RF01058;MIR806;AAAA02006649.1/21379-21617 39946:Oryza sativa Indica
Group
Length = 239
Score = 194 bits (98), Expect = 4e-49
Identities = 207/242 (85%), Gaps = 7/242 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||| |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaacttttta--tacgtgtttgaccat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||| ||||| |||||| | || ||||||||| ||||||||||| ||||| ||| |||||
Sbjct: 59 tcgttttatttaaaaaaatcaaataattatttgttcttttcatatcatttaatttattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttta--ataag 184
|||||||||||| |||||||| |||||||||| ||||| || | |||||
Sbjct: 119 taaatatacttttatgtacac--atagttttacatattttacaatttttttgaatataag 176
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 177 acaaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggag 236
Query: 245 ta 246
||
Sbjct: 237 ta 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 43 taaaaagttaacggtgtcaaacattttaaaatggagggagtat 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 238 tactccctccatttcaaaatgtttgacaccgttgacttttta 197
>RF01058;MIR806;AACV01015075.1/1512-1276 39947:Oryza sativa Japonica
Group
Length = 237
Score = 194 bits (98), Expect = 4e-49
Identities = 208/241 (86%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgt-ttttaccat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||| ||||| |||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 59 tcgttttatttaaaaaa-ttaagtaattatttattcttttcatatcatttgattcattgt 117
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||| || || ||| | ||||| |||||| |||||||||||
Sbjct: 118 taaatatactttcacgtgcagata-aaatttacatatttcatgaatttttttaataagac 176
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| || ||| ||||||||||||||||| ||||| ||| |||||||||||||| |||||
Sbjct: 177 gaatagtcaaatatgtgctaaaaagtcaaaggtgttaaatattttaaaacggagagagta 236
Query: 247 t 247
|
Sbjct: 237 t 237
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 44 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||||||||||| ||||| ||| ||||| ||||||||||| || | |||||| ||
Sbjct: 237 atactctctccgttttaaaatatttaacacctttgactttttagc-acatatttgactat 179
Query: 68 tcgtcttattcaaaaaatt 86
|||||||||| ||||||||
Sbjct: 178 tcgtcttattaaaaaaatt 160
>RF01058;MIR806;AAAA02008185.1/15144-15373 39946:Oryza sativa Indica
Group
Length = 230
Score = 194 bits (98), Expect = 4e-49
Identities = 200/237 (84%), Gaps = 10/237 (4%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttgattttttag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgtt 127
|| ||||||||||||||||||| |||||||||||| |||||||| || |||
Sbjct: 60 tcatcttattcaaaaaatttaaataattatttattattttcata---------tatagtt 110
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||| ||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 111 ttatatattttcatgtacatatatagttttatatatttcacaattttttttaataagacg 170
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 171 aacggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacggatggag 227
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| ||||| || ||||||| |||||||||||||||||||||||||||
Sbjct: 69 aataagatgaatggtcaaacacgtactaaaaaatcaacggtgtcaaacattttaaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 81.8 bits (41), Expect = 4e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 222 tccgttttaaaatgtttgacaccgttgacttttt-agcacgtgtttgaccgttcgtctta 164
Query: 76 ttcaaaaaa 84
|| ||||||
Sbjct: 163 ttaaaaaaa 155
>RF01058;MIR806;AAAA02013694.1/9956-10195 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 182/209 (87%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattc 69
|||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 1 actctccccgtttcaaaatgtttaacaccgttgactttttag-tacgtatttgaccattc 59
Query: 70 gtcttattcaaaaaatttaagtaattattta-ttcttttcata-catttgattcattgtt 127
|||||||| |||||| ||||||||||||||| || |||||||| ||||||||| ||| ||
Sbjct: 60 gtcttatttaaaaaaattaagtaattatttattttttttcatatcatttgatttattttt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
|||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 120 aaatatactttcatatacacatatagttttacatatttcacaaatttttttaataagacg 179
Query: 188 aacggttaaacatgtgctaaaaagtcaac 216
|||||| ||| || | |||||||||||||
Sbjct: 180 aacggtcaaatatttactaaaaagtcaac 208
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||| | || |||||||||||||||||| ||||||||| ||||||
Sbjct: 67 aataagacgaatggtcaaatacgtactaaaaagtcaacggtgttaaacattttgaaacgg 8
>RF01058;MIR806;AC105770.2/63257-63496 39947:Oryza sativa Japonica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 200/232 (86%), Gaps = 5/232 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||| ||
Sbjct: 4 tactccctccgtttcaaaatgtttgacaccgttaacttttt-agtacgtgtttgaccgtt 62
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 63 cgtcttatt-aaaaaaattaagtaattatttattctttttatatcatttgattcattgtt 121
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||| ||| | ||||||||||||||||| |||||| |||||||||||
Sbjct: 122 aaatatatttt--tatacacatatagttttacatatttcacaaatttttttaataagaca 179
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
|| || |||| | || ||||||||||||||||||||| ||||| |||||||
Sbjct: 180 aatagtcaaacgtatgttaaaaagtcaacggtgtcaaatattttgaaacgga 231
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||||||| ||||| || ||||||||| |||||||||||||||||| |||
Sbjct: 74 tttaataagacgaacggtcaaacacgtactaaaaagttaacggtgtcaaacattttgaaa 15
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 14 cggagggagta 4
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/73 (90%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtctt 74
||||||||||||| |||||||||||||||||||||| |||| ||||||| ||| |||||
Sbjct: 231 tccgtttcaaaatatttgacaccgttgactttttaacatac--gtttgactatttgtctt 174
Query: 75 attcaaaaaattt 87
||| |||||||||
Sbjct: 173 attaaaaaaattt 161
>RF01058;MIR806;AAAA02016981.1/697-450 39946:Oryza sativa Indica
Group
Length = 248
Score = 194 bits (98), Expect = 4e-49
Identities = 199/235 (84%), Gaps = 8/235 (3%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||||||| ||||| |||||||||||| ||||| ||||||||||| | |||||||
Sbjct: 13 tttcaaaatgtttaacaccattgactttttaagtacgtatttgaccattcattttattca 72
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt- 137
|||| ||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||||
Sbjct: 73 aaaattttgagtaattatttatttttttcatatcattttattcattattaaatatacttt 132
Query: 138 ------tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacg 191
| ||||| |||||||||||||| |||||| ||||||||||||||||
Sbjct: 133 tatgtataatgtatacatatagttttacatatttcacaaatttttttaataagacgaacg 192
Query: 192 gttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 193 gttaaacatatgctaaaaagttaacggtgtcaaacattttgaaatagagggagta 247
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/69 (88%), Gaps = 3/69 (4%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgaccattcgtcttattc 78
|||||||||||||||||||||| |||||||| ||| ||||| ||| |||||||||||
Sbjct: 236 tttcaaaatgtttgacaccgttaactttttagcata--tgtttaaccgttcgtcttatta 179
Query: 79 aaaaaattt 87
|||||||||
Sbjct: 178 aaaaaattt 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||| ||||| ||||||||| ||| | ||||||||
Sbjct: 43 taaaaagtcaatggtgttaaacattttgaaatgcagggagta 2
>RF01058;MIR806;AP008212.1/5644176-5643940 39947:Oryza sativa
Japonica Group
Length = 237
Score = 194 bits (98), Expect = 4e-49
Identities = 200/234 (85%), Gaps = 7/234 (2%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||
Sbjct: 8 ctccgtttcaaaatgtttgacaccgttaaattttttagtacgtgtttgaccattcgtctt 67
Query: 75 attcaaaaaatttaagtaattatttattcttttcatac--atttgattcattgttaaata 132
||| |||||| |||||||||||||| |||||| | | ||||||||||||||||||
Sbjct: 68 attaaaaaaa----agtaattatttattgttttcacatcaaattgattcattgttaaata 123
Query: 133 tactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacgg 192
|||||| |||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 124 tacttttatgtacacatatagttttacatatttc-atattttttttaataagatgaacgg 182
Query: 193 ttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| | || ||||||||||||||| |||||||| ||||| ||||||| ||||||
Sbjct: 183 ttagatatatgctaaaaagtcaacagtgtcaaatattttgaaacggatggagta 236
Score = 60.0 bits (30), Expect = 2e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtc-aacggtgtcaaacattttaaa 234
|||||||||||||| ||| ||||| || ||||||| | |||||||||||||||||| ||
Sbjct: 73 tttaataagacgaatggtcaaacacgtactaaaaaatttaacggtgtcaaacattttgaa 14
Query: 235 acggag 240
||||||
Sbjct: 13 acggag 8
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||||||| |||||||| ||||||||||||
Sbjct: 229 tccgtttcaaaatatttgacactgttgacttttta 195
>RF01058;MIR806;AACV01007621.1/52559-52322 39947:Oryza sativa
Japonica Group
Length = 238
Score = 194 bits (98), Expect = 4e-49
Identities = 201/233 (86%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||||||||||
Sbjct: 9 tccgtttcaaaatatttgacatcgttaactttttaa-tacgtgtttgatcattcgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgttaaatata 134
|| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 68 ttaaaaaaatt-aagtaattatttattctttttatattatttgattcgttgttaaatata 126
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtt 194
|||||||| ||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 127 ttttcatgtgcacatatagttttacatattt-tataatttttttaataagatgaacggtc 185
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||| ||||||||||||||||||| ||| ||| | ||| |||||||||||||||
Sbjct: 186 aaatatgtgctaaaaagtcaacgatgttaaataatttgaaacggagggagtat 238
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| | | ||||| || |||||||| |||| ||||||| ||||| |||
Sbjct: 72 tttaataagacgaatgatcaaacacgtattaaaaagttaacgatgtcaaatattttgaaa 13
Query: 236 cggagggagta 246
|||| ||||||
Sbjct: 12 cggatggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||||||| | ||| ||| |||||||||||||
Sbjct: 238 atactccctccgtttcaaattatttaacatcgttgacttttta 196
>RF01058;MIR806;AC134230.2/30599-30357 39947:Oryza sativa Japonica
Group
Length = 243
Score = 192 bits (97), Expect = 2e-48
Identities = 210/249 (84%), Gaps = 15/249 (6%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgtt--------gactttttaaatacgtgt 59
|||||| |||||||||||||||||| |||||||| || ||||||| || ||||
Sbjct: 1 atactccctccgtttcaaaatgtttaacaccgttaattttttgattttttaagtatgtgt 60
Query: 60 ttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttga 118
|| ||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||||
Sbjct: 61 ttaaccattcgtcttatt-aaaaattttaagtaattatttatttttttcatatcatttgt 119
Query: 119 ttcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt 178
||||||||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 120 ttcattgttaaatatgttttcatgtacacatatagttttacatatttcacaaattttttt 179
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 180 aataagacgaacg-----acatgtgctaaaaagtcaacggtatcaaacattttgaaacgg 234
Query: 239 agggagtat 247
|| ||||||
Sbjct: 235 agagagtat 243
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 243 atactctctccgtttcaaaatgtttgataccgttgacttttta 201
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 214 aacggtgtcaaacattttaaaacggagggagtat 247
|||||||| ||||||||| |||||||||||||||
Sbjct: 34 aacggtgttaaacattttgaaacggagggagtat 1
>RF01058;MIR806;AACV01027603.1/5402-5167 39947:Oryza sativa Japonica
Group
Length = 236
Score = 190 bits (96), Expect = 7e-48
Identities = 206/241 (85%), Gaps = 6/241 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atactccctcagttacaaaatgtttgacaccgttgactttttag-tacgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaattatttatttattctttttatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||| ||||||| | ||||||||||| ||||| |||||||||||
Sbjct: 120 taaatatattttcatg---atgtatagttttacatattt-tgtaatttttttaataagac 175
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||| | |||| |||| |||||||||||| || || ||||||| ||||||||||||||
Sbjct: 176 gaacgatcaaacgtgtgttaaaaagtcaacagtatcgtacattttgaaacggagggagta 235
Query: 247 t 247
|
Sbjct: 236 t 236
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || |||||||||||||||||||||||||||| ||| |
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgtaactg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||| || || ||||||||||| || || |||||| | |
Sbjct: 236 atactccctccgtttcaaaatgtacgatactgttgacttttt-aacacacgtttgatcgt 178
Query: 68 tcgtcttattcaaaaaatt 86
|||||||||| ||||||||
Sbjct: 177 tcgtcttattaaaaaaatt 159
>RF01058;MIR806;AAAA02035408.1/6482-6708 39946:Oryza sativa Indica
Group
Length = 227
Score = 190 bits (96), Expect = 7e-48
Identities = 177/203 (87%), Gaps = 3/203 (1%)
Strand = Plus / Plus
Query: 29 gtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaattta 88
|||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||
Sbjct: 13 gtttgacaccgttgactttttaaa-atatatttgaccgttcgtcttattcaaaaaattta 71
Query: 89 agtaattatttattcttttcata-catttgattcattgttaaatatactttcatgtacac 147
|| ||||||| |||||||||||| ||||||||||||||||||||||||||| || || ||
Sbjct: 72 agcaattattaattcttttcataccatttgattcattgttaaatatacttttatatatac 131
Query: 148 atatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgcta 206
|||||||||||| |||||| ||| |||||||||||||||||||||||| |
Sbjct: 132 atatagttttacatatttcataaaagtttttgaataagacgaacggttaaacatgtttaa 191
Query: 207 aaaagtcaacggtgtcaaacatt 229
|||||||||||| ||||||||||
Sbjct: 192 aaaagtcaacggcgtcaaacatt 214
Score = 60.0 bits (30), Expect = 2e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 26 aatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||||||||| ||||||||||||| || || ||||| ||| |||||||||||||||||
Sbjct: 214 aatgtttgacgccgttgacttttttaa-acatgtttaaccgttcgtcttattcaaaaa 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 226
||||||||||||||| ||| || | ||||||||||||||||||||||
Sbjct: 60 aataagacgaacggtcaaatatattttaaaaagtcaacggtgtcaaac 13
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 190 bits (96), Expect = 7e-48
Identities = 167/191 (87%), Gaps = 2/191 (1%)
Strand = Plus / Plus
Query: 59 tttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttg 117
||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||
Sbjct: 47 tttgaccattcgttttattcaaaaaagttaagtaattattaattcttttcatatcatttg 106
Query: 118 attcattgttaaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnnt 176
||||||| ||||||||||||||||||| | |||||||||||| |||||| |
Sbjct: 107 attcattattaaatatactttcatgtatatatatagttttacttatttcacaaaaaaatt 166
Query: 177 ttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaac 236
||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 167 ttaataatacgaacggtcaaacatatgctaaaaagttaacggtgtcaaacatttagaaac 226
Query: 237 ggagggagtat 247
|||||||||||
Sbjct: 227 ggagggagtat 237
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 237 atactccctccgtttctaaatgtttgacaccgttaacttttta 195
>RF01058;MIR806;AC130607.2/29520-29261 39947:Oryza sativa Japonica
Group
Length = 260
Score = 188 bits (95), Expect = 3e-47
Identities = 139/151 (92%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
||||||||||||||||||| || ||||||||||| | |||||| ||||||||||||||
Sbjct: 1 ccgtttcaaaatgtttgacgcctttgactttttagc-atgtgtttaaccattcgtcttat 59
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
| ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 60 ttaaaaagtttaagtaattattaattcttttcatatcatttgattcattgttaaatatac 119
Query: 136 tttcatgtacacatatagttttacgtatttc 166
|||||||||||||||||||||||| ||||||
Sbjct: 120 tttcatgtacacatatagttttacatatttc 150
Score = 103 bits (52), Expect = 1e-21
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtta 195
|||||||||||||||||||||||| |||||| || |||||||||||| || |
Sbjct: 158 tttcatgtacacatatagttttacatatttcacaatttttttgaataagacgaacagtca 217
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 218 aacatgtgctaaaaaatcaacggtgtcaaacatttttaaacgg 260
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||||||||| |||||||||||||| || |||||||||||| ||||||
Sbjct: 60 aataagacgaatggttaaacacatgctaaaaagtcaaaggcgtcaaacattttgaaacgg 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||| |||||||||||||||||||| ||||| | || |||||||| ||||||||||
Sbjct: 260 ccgtttaaaaatgtttgacaccgttga-ttttttagcacatgtttgactgttcgtcttat 202
Query: 77 tcaaaaaa 84
||||||||
Sbjct: 201 tcaaaaaa 194
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 188 bits (95), Expect = 3e-47
Identities = 193/224 (86%), Gaps = 6/224 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||||||||| ||| |||||| | ||||||||||||| | ||||||||||||
Sbjct: 2 tactctctccgtttctaaaaatttgacgctgttgactttttaagca--tgtttgaccatt 59
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| ||||| ||||||| ||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 60 cgttttattaaaaaaat--aagtaattattaattcttttcctatcatttgattcattgtt 117
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
|||||||||||||| || |||||||||||||| |||||| ||| ||||| ||
Sbjct: 118 aaatatactttcatatagacatatagttttacatatttcacaattttttttgaataacac 177
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 178 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 221
Score = 65.9 bits (33), Expect = 3e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
|||| ||||||||||||||||||||||||| | || ||||||||| ||||| |||||||
Sbjct: 226 tttctaaatgtttgacaccgttgacttttt-agcacatgtttgaccgttcgtgttattca 168
Query: 80 aaaaa 84
|||||
Sbjct: 167 aaaaa 163
>RF01062;MIR812;AP008207.1/12546112-12545941 39947:Oryza sativa
Japonica Group
Length = 172
Score = 186 bits (94), Expect = 1e-46
Identities = 150/169 (88%), Gaps = 2/169 (1%)
Strand = Plus / Minus
Query: 44 ctttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattc 103
|||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 172 ctttttaagtacgtgtttgaccattcgtcttattaaaaaaatttaggtaattatttattc 113
Query: 104 ttttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgta 162
|||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 112 ttttcatatcatttgattcattgttaaatacacttttatgtacacatatagttttacata 53
Query: 163 tttc-nnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaa 210
|||| |||||||||||||||||| ||||||| ||||||||
Sbjct: 52 tttcacaaattttttttaataagacgaacggtcaaacatgcgctaaaaa 4
>RF01058;MIR806;AP008207.1/31190054-31189814 39947:Oryza sativa
Japonica Group
Length = 241
Score = 186 bits (94), Expect = 1e-46
Identities = 195/225 (86%), Gaps = 6/225 (2%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||||||| ||||||||||||||||| || |||||| ||||||| |||||||||
Sbjct: 12 tttcaaaatgtttaacaccgttgactttttag-tatgtgtttaaccattcatcttattca 70
Query: 80 aaaaa-tttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||| |||||||||||||||||| |||| ||| |||||||||| | |||||||||||||
Sbjct: 71 aaaaaatttaagtaattatttattttttttatatcatttgattcgtcgttaaatatactt 130
Query: 138 tcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaa 197
|||||||||||||||||||||| |||||| || ||||||||||||||| |||
Sbjct: 131 tcatgtacacatatagttttacttatttc-aaaaataattaaataagacgaacggtcaaa 189
Query: 198 catgtgct--aaaaagtcaacggtgtcaaacattttaaaacggag 240
|||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 190 tatgtaattaaaaaaatcaacggtgtcaaacattttaaaacggag 234
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 12 tctctccgtttcaaaatgtttgacaccgttga-ctttttaaatacgtgtttgaccattcg 70
||||||||||| |||||||||||||||||||| ||||||| ||| | ||||||| ||||
Sbjct: 237 tctctccgttttaaaatgtttgacaccgttgatttttttaattacatatttgaccgttcg 178
Query: 71 tcttatt 77
|||||||
Sbjct: 177 tcttatt 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||| ||| ||||||||| | |||||||||||||||||| |||||||||
Sbjct: 68 aataagatgaatggttaaacacatactaaaaagtcaacggtgttaaacatttt 16
>RF01058;MIR806;AP008212.1/21880161-21879923 39947:Oryza sativa
Japonica Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 196/229 (85%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||||||||||||| |||| || |||||||| |||||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgccaccattaactttttagcgt-gtgtttgaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| |||||||| || ||||||||||||||||| ||| ||||||||| |||||
Sbjct: 60 tcgtcttattaaaaaaattaaa-taattatttattctttttatatcatttgatttattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||||||||| ||||||| || |||||| || ||||||||
Sbjct: 119 taaatatactttcatgtacacgtatagttgtatatatttcacaaattttttgaataagac 178
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 179 gaacggtcaaatatgtgctaaagagtcaacggtgtcaaacattttaaaa 227
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||||||| ||||| |||||||||| || |||| |||||||||| |||
Sbjct: 72 tttaataagacgaacggtcaaacacacgctaaaaagttaatggtggcaaacattttgaaa 13
Query: 236 cggagggagtat 247
||||||||||||
Sbjct: 12 cggagggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||| ||| ||| |||||||||||||||||||||| |||| || | ||||||| |
Sbjct: 239 atactctatccattttaaaatgtttgacaccgttgactctttagc-acatatttgaccgt 181
Query: 68 tcgtcttattcaaaaaattt 87
||||||||||||||||||||
Sbjct: 180 tcgtcttattcaaaaaattt 161
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 186 bits (94), Expect = 1e-46
Identities = 190/221 (85%), Gaps = 3/221 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||| ||||| ||| |||||||||| || || ||||||||| ||||||||||||||||||
Sbjct: 17 aaatatttgataccattgacttttttaa-acctgtttgaccgttcgtcttattcaaaaaa 75
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| ||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 76 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgt 135
Query: 144 acacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgt 202
| |||||| ||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 136 aggcatataattttatatattttacaaaagtttttgaataagacgaacggttaaacatgt 195
Query: 203 gctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 196 gctaaaaagtcaacggtatcaaacattttgaaatggaggga 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| ||||||||||||||| |||||||||||||| | || ||||| ||| ||||||||
Sbjct: 233 ctccatttcaaaatgtttgataccgttgacttttt-agcacatgtttaaccgttcgtctt 175
Query: 75 attcaaaaa 83
|||||||||
Sbjct: 174 attcaaaaa 166
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 186 bits (94), Expect = 1e-46
Identities = 207/242 (85%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||| |||||| ||||||||||||| || || | ||||| | |
Sbjct: 1 atactccctccgtttttaaatatttgacgccgttgacttttttaa-acatatttgatcgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||| ||||||||||||| |||||| ||||||||| || ||||||||||||| |
Sbjct: 60 ttgtcttatttaaaaaatttaagtcattattaattcttttcgtatcatttgattcattat 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||| |||||||| |||||||| |||||| |||||||||||
Sbjct: 120 aaaatatactttcatatacacataaagttttacatatttc-aaaatttttttaataagac 178
Query: 187 gaacggttaaaca-tgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 179 gaacggttaaacattgtactaaaaagttaacggtgtcaaacattttgaaacggagggagt 238
Query: 246 at 247
||
Sbjct: 239 at 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatac-gtgtttgacca 66
|||||| ||||||||||||||||||||||||||| ||||||| | ||| ||||| |||
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttaacttttt-agtacaatgtttaaccg 182
Query: 67 ttcgtcttattcaaaaaattt 87
||||||||||| |||||||||
Sbjct: 181 ttcgtcttattaaaaaaattt 161
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 42 aaaaagtcaacggcgtcaaatatttaaaaacggagggagtat 1
>RF01058;MIR806;AP008214.1/2109258-2109019 39947:Oryza sativa
Japonica Group
Length = 240
Score = 184 bits (93), Expect = 4e-46
Identities = 206/242 (85%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||||| |||||||| |||| ||| ||||| || |||||| ||| | |||||||||||
Sbjct: 1 atactctatccgtttctaaatatttaacaccattaacttttaaaaca--tgtttgaccat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||| || |||||||| ||||||||| || |||||||||||||||
Sbjct: 59 tcgtcttattcaaaaaattaaa-taattattaattcttttcctatcatttgattcattgt 117
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
||||||||||||||| || ||||||||||||| |||||| || ||||||||
Sbjct: 118 taaatatactttcatttatacatatagttttatatatttcataatttttttaaataagac 177
Query: 187 gaacggttaaacatgtgct--aaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|||||||||||||||| || ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 178 gaacggttaaacatgtacttaaaaaaatcaacggtgtcaaacgtttagaaacggagggag 237
Query: 245 ta 246
||
Sbjct: 238 ta 239
Score = 65.9 bits (33), Expect = 3e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttga-ctttttaaatacgtgtttgaccat 67
||||| ||||||||| ||| ||||||||||||||| ||||||| ||| ||||| ||| |
Sbjct: 239 tactccctccgtttctaaacgtttgacaccgttgatttttttaagtacatgtttaaccgt 180
Query: 68 tcgtcttattcaaaaaa 84
|||||||||| ||||||
Sbjct: 179 tcgtcttatttaaaaaa 163
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 184 bits (93), Expect = 4e-46
Identities = 172/199 (86%), Gaps = 3/199 (1%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 39 tttttaaata--tgtttgaccattcgtcttattaaaaaaaattaagtaattattaattct 96
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|| | || ||||| ||||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 97 ttccctatcatttaattcattattaaatatactttcatgtatacatatagttttacatat 156
Query: 164 ttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 223
||| ||||||||||| || ||| ||||||||||||||||| |||||||||||
Sbjct: 157 ttcacaaatttttttaataagacaaatggtcaaacatgtgctaaaaagccaacggtgtca 216
Query: 224 aacattttaaaacggaggg 242
||||||| ||||||||||
Sbjct: 217 aacatttagaaacggaggg 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||||||||||||||||| |||||| | || |||||||||||| |||||
Sbjct: 233 ctccgtttctaaatgtttgacaccgttggcttttt-agcacatgtttgaccatttgtctt 175
Query: 75 attcaaaaaattt 87
||| |||||||||
Sbjct: 174 attaaaaaaattt 162
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 201/235 (85%), Gaps = 5/235 (2%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccattcgtct 73
|||||||||||||| |||||| |||||||||||| ||||| ||||||||| |||||||
Sbjct: 8 ctccgtttcaaaatatttgacgtcgttgacttttttaaata--tgtttgaccgttcgtct 65
Query: 74 tattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaata 132
|||| |||||||||||||||||||| ||| |||| || ||||||||||||||||||| |
Sbjct: 66 tattaaaaaaatttaagtaattattaattttttttctatcatttgattcattgttaaaaa 125
Query: 133 tactttcatgtacacatatagttttacgtatttcnnnnnnnnntt-taataagacgaacg 191
||||| ||||| ||||||||||||| |||||| || |||||||||||||
Sbjct: 126 tacttatatgtatacatatagttttatatatttcgcaaaagttttggaataagacgaacg 185
Query: 192 gttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 186 gttaaacatgtgctaaaaagtcaacggcgtcaaatatttagaaacggagggagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||||||| |||||| | |||||||||||| |||||| ||||| |||
Sbjct: 72 tttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatattttgaaa 13
Query: 236 cggagggagtat 247
|||||| |||||
Sbjct: 12 cggaggaagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| |||| |||||| ||||||||||||| | || ||||| ||| ||
Sbjct: 240 tactccctccgtttctaaatatttgacgccgttgacttttt-agcacatgtttaaccgtt 182
Query: 69 cgtcttattcaaaaa 83
|||||||||| ||||
Sbjct: 181 cgtcttattccaaaa 167
>RF01058;MIR806;AAAA02030957.1/6469-6721 39946:Oryza sativa Indica
Group
Length = 253
Score = 182 bits (92), Expect = 2e-45
Identities = 127/136 (93%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttag-tacgtatttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttaagtatttatttattcttttcatatgatctgattcattgtt 120
Query: 128 aaatatactttcatgt 143
||||||||||||||||
Sbjct: 121 aaatatactttcatgt 136
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||| | || |||||||||||||||||||||| ||||| ||||||
Sbjct: 69 aataagacgaatggtcaaatacgtactaaaaagtcaacggtgtcaaatattttgaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
||||||||||||||||||||| | ||||||||| ||| |||||||| ||||| |||||
Sbjct: 239 gtttcaaaatgtttgacaccgctaactttttaagtacatgtttgactgttcgttttatta 180
Query: 79 aaaa 82
||||
Sbjct: 179 aaaa 176
>RF01058;MIR806;AP008212.1/26338977-26339216 39947:Oryza sativa
Japonica Group
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 200/235 (85%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||| ||||| ||||||||||||||| || |||||||||||||
Sbjct: 2 tactcactccgtttcaaaatatttgataccgttgactttttag-tatgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgtt 127
||||||| |||||||||||||||||||||||| |||| ||| |||||||||||| ||
Sbjct: 61 tatcttatttaaaaaatttaagtaattatttattatttttatattatttgattcattatt 120
Query: 128 aaatatactttcatgtacacatatagttttacgta-tttcnnnnnnnnntttaataagac 186
||||||||||| ||||||| |||||||||||| || ||| |||||||| ||
Sbjct: 121 aaatatacttttatgtacatatatagttttacatattttataaaatttttttaataaaac 180
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagg 241
||| ||||||| |||||||||||| | |||||||||||||| ||| |||||||||
Sbjct: 181 gaatggttaaatatgtgctaaaaaattaacggtgtcaaacaatttgaaacggagg 235
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 44 ctaaaaagtcaacggtatcaaatattttgaaacggagtgagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||| |||||||||||||| | ||||| | || | ||| ||||||||| ||
Sbjct: 234 ctccgtttcaaattgtttgacaccgtt-aattttttagcacatatttaaccattcgtttt 176
Query: 75 attcaaaaaattt 87
||| |||||||||
Sbjct: 175 attaaaaaaattt 163
>RF01058;MIR806;AL731600.3/67344-67602 39947:Oryza sativa Japonica
Group
Length = 259
Score = 182 bits (92), Expect = 2e-45
Identities = 192/223 (86%), Gaps = 4/223 (1%)
Strand = Plus / Plus
Query: 27 atgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaat- 85
||||||||||||| ||||| |||| ||||| |||||||||| |||||||||||||||
Sbjct: 39 atgtttgacaccgatgactatttag-tacgtatttgaccatttgtcttattcaaaaaaaa 97
Query: 86 ttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgta 144
|| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||
Sbjct: 98 ttgagtaattatttattctttttatatcatttgattcattgttaaatatacttttatgta 157
Query: 145 cacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtgc 204
||||||||||||||| ||||| |||||||||| ||||||| ||||||| |
Sbjct: 158 cacatatagttttacatattt-tataatttttttaataagatgaacggtcaaacatgcac 216
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||| |||||| |||||| ||||||| |||||||
Sbjct: 217 taaaaagtcaacgatgtcaagcattttgaaacggatggagtat 259
Score = 61.9 bits (31), Expect = 4e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||||||||| |||||| |||||||||||| | | | ||||||||| ||| |||||
Sbjct: 251 tccgtttcaaaatgcttgacatcgttgacttttt-agtgcatgtttgaccgttcatctta 193
Query: 76 ttcaaaaaatt 86
|| ||||||||
Sbjct: 192 ttaaaaaaatt 182
>RF01058;MIR806;AP008213.1/9561775-9562013 39947:Oryza sativa
Japonica Group
Length = 239
Score = 182 bits (92), Expect = 2e-45
Identities = 203/239 (84%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||| ||||| |||| |||||| || |||| ||||| || || | ||||||| ||
Sbjct: 2 tactccctctgtttctaaatatttgacgccattgatttttttaa-acatatttgaccctt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 61 cgtcttattaaaaaaatt-aagtaattatcaattcttttcatatcatttgattcattatt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
| |||||||||||| || |||||||||||||| |||||| || ||||||||
Sbjct: 120 acatatactttcatatatacatatagttttacatatttcacaaaaaaattaaataagaca 179
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 180 aacggttaaacatgtgctaaaaagtcaacagtgtcaaacatttagaaacggagggagta 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct: 238 tactccctccgtttctaaatgtttgacactgttgacttttta 197
>RF01062;MIR812;AP005480.2/81366-81538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 180 bits (91), Expect = 6e-45
Identities = 144/162 (88%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 54 acgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcat-ac 112
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 162 acgtgtttaaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatctc 103
Query: 113 atttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnn 172
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 102 atttgattcattgttaaataacctttcatgtacacatatagttttacatatttcacaatt 43
Query: 173 nnnttt-aataagacgaacggttaaacatgtgctaaaaagtc 213
||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 42 ttttttaaataagacgaatggtcaaacatgtgctaaaaagtc 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||| ||||||||| |||||||||||||
Sbjct: 139 aataagacgaatggttaaacacgtgctaaaaagtc 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaa 84
||||||||||||||||||||| ||||||
Sbjct: 15 tgtttgaccattcgtcttatttaaaaaa 42
>RF01062;MIR812;AP005658.3/58267-58095 39947:Oryza sativa Japonica
Group
Length = 173
Score = 180 bits (91), Expect = 6e-45
Identities = 110/115 (95%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 163 tacgtgtttgaccattcgtcttattcaaaaaatttaagtatttatttattcttttcatat 104
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttc 166
||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 103 catttgattcattgttaaatatatttttatgtacacatatagttttacatatttc 49
>RF01062;MIR812;AAAA02034426.1/30822-30993 39946:Oryza sativa Indica
Group
Length = 172
Score = 180 bits (91), Expect = 6e-45
Identities = 145/162 (89%), Gaps = 3/162 (1%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 162 tacgtgtttgaccattcgtcttattcaaaaaatttaaatatttatttattcttttcatat 103
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttc-nnnn 170
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 102 catttgattcattgttaaatatactttcatgtaca-atatagttttacatatttcacaaa 44
Query: 171 nnnnntttaataagacgaacggttaaacatgtgctaaaaagt 212
|||||||||||||||||| |||||||| |||||||||
Sbjct: 43 atttttttaataagacgaacggtcaaacatgtactaaaaagt 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaattt 87
||||||||| ||||||||||| |||||||||
Sbjct: 15 tgtttgaccgttcgtcttattaaaaaaattt 45
>RF01058;MIR806;AAAA02013533.1/10091-9859 39946:Oryza sativa Indica
Group
Length = 233
Score = 180 bits (91), Expect = 6e-45
Identities = 203/238 (85%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||| ||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 2 tactccctccattttaaaatgtttgacaccattgactttttag-tacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattgt 126
| ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||| |
Sbjct: 61 catcttatttaaaaaaatttaagtaattatttatttttttcatatcatttgattcattat 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||| | ||| | |||||||||| ||||| ||||||||||
Sbjct: 121 taaatatactttcacggacatacatagttttacatattt--------tttttaataagat 172
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|| ||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 173 aaatggtcaaacatgtgctaaaaagtcaacggtatcaaacattttgaaacggatggag 230
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||||| ||
Sbjct: 69 aataagatgaatggtcaaacatgtactaaaaagtcaatggtgtcaaacattttaaaatgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||||||||| |||||||||||||| | || |||||||||||| |||||
Sbjct: 225 tccgtttcaaaatgtttgataccgttgacttttt-agcacatgtttgaccatttatctta 167
Query: 76 ttcaaaaaa 84
|| ||||||
Sbjct: 166 ttaaaaaaa 158
>RF01058;MIR806;AAAA02006403.1/1537-1777 39946:Oryza sativa Indica
Group
Length = 241
Score = 180 bits (91), Expect = 6e-45
Identities = 199/234 (85%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||||||||||| ||| |||||| | ||||| ||| || ||| ||||||
Sbjct: 9 tccgtttcaaaatgtttgacaaagttaacttttgag-tacgtatttaacgatttgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 68 ttcaaaaaatttaaataattatttattctttttatatcatttaattcattgttaaatata 127
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggt 193
||||||||||||||||||||||| |||||| ||| ||||| |||||||||
Sbjct: 128 ttttcatgtacacatatagttttatatatttcacaattttttttaaataaaacgaacggt 187
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||| || ||||||||||| ||| |||||||| ||||| |||||||||||||||
Sbjct: 188 caaatatatgctaaaaagttaacagtgtcaaatattttgaaacggagggagtat 241
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| |||||||||||||| |||||||| ||| ||||||||
Sbjct: 241 atactccctccgtttcaaaatatttgacactgttaacttttta 199
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 180 bits (91), Expect = 6e-45
Identities = 204/241 (84%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgacca 66
|||||||||| |||| |||| |||||| || |||||||||| ||||| ||||| |||
Sbjct: 1 atactctctctatttctaaatatttgacgccattgacttttttaaata--tgtttaaccg 58
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 59 ttcgtcttatttaaaaaatttaagtaattattaattcttttcatatcatttgattcattg 118
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataaga 185
|||||||||||| ||||| ||||||||||||| |||||| || ||||| |
Sbjct: 119 ttaaatatacttatatgtatgcatatagttttacatatttcacaaaaattttgaataaaa 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||| |||||||||||||||||| ||||||||||| |||| |||||||||||||
Sbjct: 179 cgaatggtcaaacatgtgctaaaaagttgacggtgtcaaatatttagaaacggagggagt 238
Query: 246 a 246
|
Sbjct: 239 a 239
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| |||| ||||||||||| |||||||| || ||||||||||||
Sbjct: 239 tactccctccgtttctaaatatttgacaccgtcaactttttagc-acatgtttgaccatt 181
Query: 69 cgtcttattcaaaa 82
||| ||||||||||
Sbjct: 180 cgttttattcaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
|||||||||||||||||||||| | |||||||||| || |||||| ||||
Sbjct: 69 aataagacgaacggttaaacatatttaaaaaagtcaatggcgtcaaatattt 18
>RF01058;MIR806;AACV01002983.1/10960-10719 39947:Oryza sativa
Japonica Group
Length = 242
Score = 180 bits (91), Expect = 6e-45
Identities = 207/244 (84%), Gaps = 6/244 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgacca 66
|||||| |||||||| |||| ||| ||| |||||||||||| | || ||||||||||
Sbjct: 1 atactccctccgtttttaaatatttaacaacgttgacttttttttaaacatgtttgacca 60
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcatac-atttgattcattg 125
|| |||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct: 61 tttgtcttattaaaaaa--ttaagtaattattaattcttttcatattatttgattcattg 118
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt--aataa 183
||||||||||||||||||| ||||||||||||| |||||| ||| |||||
Sbjct: 119 ttaaatatactttcatgtatacatatagttttatatatttcacatattttttttaaataa 178
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 179 aacgaacggtcaaacatgtgctaaaaagtcaacgatgttaaacatttaaaaacggaggga 238
Query: 244 gtat 247
||||
Sbjct: 239 gtat 242
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||| ||| ||| |||| ||||||||||||||||
Sbjct: 42 aaaaagtcaacgttgttaaatatttaaaaacggagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||||||| ||| |||||||||||| | || ||||||||| |
Sbjct: 242 atactccctccgtttttaaatgtttaacatcgttgacttttt-agcacatgtttgaccgt 184
Query: 68 tcgtcttattcaaaaaa 84
|||| ||||| ||||||
Sbjct: 183 tcgttttatttaaaaaa 167
>RF01058;MIR806;AAAA02002143.1/37318-37554 39946:Oryza sativa Indica
Group
Length = 237
Score = 178 bits (90), Expect = 2e-44
Identities = 200/234 (85%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| |||||| ||||||||||||| || || |||||||| |||| ||||
Sbjct: 7 ctccgtttctaaatatttgacgccgttgacttttttaa-acatgtttgactattcatctt 65
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||| |||||| | ||||||||||| ||||||||| || || |||||| ||| ||||||||
Sbjct: 66 attaaaaaaaat-aagtaattattaattcttttcctatcaattgatttattattaaatat 124
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggt 193
||||||||||| |||||||||||||| |||||| |||||||||||||||| |
Sbjct: 125 actttcatgtatacatatagttttacatatttc-gcagtttttttaataagacgaacgct 183
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 184 caaacatgtgctaaaaagttaacggtgtcaaacatttagaaacgaagggagtat 237
Score = 58.0 bits (29), Expect = 6e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| || |||||| ||||||||||||||||| ||||||| | || ||||||| | |
Sbjct: 237 atactcccttcgtttctaaatgtttgacaccgttaacttttt-agcacatgtttgagcgt 179
Query: 68 tcgtcttattcaaaaaa 84
|||||||||| ||||||
Sbjct: 178 tcgtcttattaaaaaaa 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||| ||| || |||||||| ||||||||||||| |||||| |||| |||
Sbjct: 71 tttaataagatgaatagtcaaacatgtttaaaaaagtcaacggcgtcaaatatttagaaa 12
Query: 236 cggaggg 242
|||||||
Sbjct: 11 cggaggg 5
>RF01058;MIR806;AAAA02027758.1/1941-1701 39946:Oryza sativa Indica
Group
Length = 241
Score = 178 bits (90), Expect = 2e-44
Identities = 196/233 (84%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
||||| |||| |||| ||||| |||||| | ||||||| ||||| ||| ||||||||| |
Sbjct: 1 atactatctctgttttaaaatatttgacgctgttgactctttaagtacatgtttgaccgt 60
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcatac-atttgattcattgt 126
|| | |||||||||| ||||||||| ||||| ||||||||| ||| ||||||||||||||
Sbjct: 61 tcatattattcaaaatatttaagtagttattaattcttttcctaccatttgattcattgt 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||| ||| |||| |||||| |||||| |||||| |||||||||||
Sbjct: 121 taaatatatttttgtgtaggcatataattttacatatttcataaaagtttttaataagac 180
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
||||||| |||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 181 gaacggtcaaacatgtgctaaaaaatcaatggtgtcaaacattttgaaacgga 233
Score = 61.9 bits (31), Expect = 4e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
||||||||||||||||||||||| |||| ||||| | || ||||||||| |||||||||
Sbjct: 233 tccgtttcaaaatgtttgacaccattga-ttttttagcacatgtttgaccgttcgtctta 175
Query: 76 ttcaaaa 82
|| ||||
Sbjct: 174 ttaaaaa 168
>RF01058;MIR806;AAAA02031935.1/254-13 39946:Oryza sativa Indica
Group
Length = 242
Score = 178 bits (90), Expect = 2e-44
Identities = 208/244 (85%), Gaps = 6/244 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||||||||| ||||||||||||||||| ||| ||| || ||||||||
Sbjct: 1 atactccctccatttcaaaatctttgacaccgttgacttcttag-tacatgcttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattctt-ttcata--catttgattcatt 124
||| ||||||||| ||||||||| ||||||||||| || ||||| ||| ||||| |||
Sbjct: 60 tcggcttattcaagaaatttaagcaattatttatttttgttcatcatcatctgatttatt 119
Query: 125 gttaaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataa 183
||||||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 120 gttaaatatactttcatgtacacatatagttttacatatttcacaatttttgttgaataa 179
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|| ||||||| | ||||||| | ||||||||||||||||||||||||| |||||||||||
Sbjct: 180 gatgaacggtcacacatgtgat-aaaagtcaacggtgtcaaacattttgaaacggaggga 238
Query: 244 gtat 247
||||
Sbjct: 239 gtat 242
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttt 48
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 atactccctccgtttcaaaatgtttgacaccgttgactttt 202
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
|||||| |||| ||| || ||||| |||| ||||||||||||||||| ||||| ||| ||
Sbjct: 69 aataagccgaatggtcaagcatgtactaagaagtcaacggtgtcaaagattttgaaatgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AP008212.1/26178843-26179082 39947:Oryza sativa
Japonica Group
Length = 240
Score = 178 bits (90), Expect = 2e-44
Identities = 167/193 (86%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||||||||||||||||||| |||||| ||||||||||||| ||||||||| || ||||
Sbjct: 48 tgtttgaccattcgtcttattaaaaaaaattaagtaattattaattcttttcctatcatt 107
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
||||||||||||||||||||||||||||| | ||||| ||||| ||||||
Sbjct: 108 tgattcattgttaaatatactttcatgtatatttatagctttacatatttcacaaaattt 167
Query: 176 ttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaa 234
||| ||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||
Sbjct: 168 tttgaatgagacgaacggtcaaatatgtgctaaaaagtcaacggtgtcaaacatttagaa 227
Query: 235 acggagggagtat 247
|| ||||||||||
Sbjct: 228 acagagggagtat 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| ||||| |||||||||||||||||||||||||| || | ||||||| |
Sbjct: 240 atactccctctgtttctaaatgtttgacaccgttgactttttagc-acatatttgaccgt 182
Query: 68 tcgtcttattcaaaaaattt 87
|||||| |||||||||||||
Sbjct: 181 tcgtctcattcaaaaaattt 162
>RF01058;MIR806;AAAA02026229.1/38478-38703 39946:Oryza sativa Indica
Group
Length = 226
Score = 178 bits (90), Expect = 2e-44
Identities = 171/197 (86%), Gaps = 3/197 (1%)
Strand = Plus / Plus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||
Sbjct: 31 tacgtgtttgaccattcgtcttattaaaaaaatt-aagtaattatttattattttcatat 89
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
||||||||| |||||||||||||||||||| || ||||||||||||| ||||||
Sbjct: 90 catttgatttattgttaaatatactttcatatatacatatagttttatatatttcacaaa 149
Query: 172 nnnntttaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattt 230
|| ||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||
Sbjct: 150 ttttttaaataagacgaacggtcaaacatgtgctaaaaaaatcaacggagtcaaatattt 209
Query: 231 taaaacggagggagtat 247
| |||||||||| ||||
Sbjct: 210 tgaaacggagggggtat 226
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||||||||| |||||| ||||||| ||||| | || ||||||||| ||||||||
Sbjct: 219 ctccgtttcaaaatatttgactccgttgatttttttagcacatgtttgaccgttcgtctt 160
Query: 75 attcaaaaaattt 87
||| |||||||||
Sbjct: 159 atttaaaaaattt 147
>RF01058;MIR806;AP008210.1/35216340-35216121 39947:Oryza sativa
Japonica Group
Length = 220
Score = 176 bits (89), Expect = 1e-43
Identities = 187/219 (85%), Gaps = 5/219 (2%)
Strand = Plus / Plus
Query: 21 ttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaa 80
|||||||||||||| | |||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 6 ttcaaaatgtttgatatcgttgactttgtaagtacgtatttgaccattcgtcttattcaa 65
Query: 81 aaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactttc 139
|||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 66 aaaattta---acttatttattcttttcatatcatttgatttattgttaaatatactttt 122
Query: 140 atgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaaca 199
||||||||||||| ||||| |||||| ||||||| ||||||||||||||||
Sbjct: 123 atgtacacatataattttagatatttc-atattttttttaatacgacgaacggttaaaca 181
Query: 200 tgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
|||| || ||||| |||| | ||||| ||||| ||||||
Sbjct: 182 tgtgttataaagttaacgatatcaaatattttgaaacgg 220
>RF01058;MIR806;AACV01011934.1/13088-12853 39947:Oryza sativa
Japonica Group
Length = 236
Score = 176 bits (89), Expect = 1e-43
Identities = 135/149 (90%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattc 69
|||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 3 actccctccgtttcaaaatgtttgacaccattgactttttag-tacgtgtttgaccattc 61
Query: 70 gtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgttaa 129
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattatttattattttcata-----tattcattgttaa 116
Query: 130 atatactttcatgtacacatatagtttta 158
||||||||| |||||||||| || |||||
Sbjct: 117 atatacttttatgtacacatgtaatttta 145
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| ||||| || |||||||||||| ||||||||||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacacgtactaaaaagtcaatggtgtcaaacattttgaaacgg 10
Query: 239 agggagt 245
|||||||
Sbjct: 9 agggagt 3
>RF01058;MIR806;AAAA02021981.1/21983-21742 39946:Oryza sativa Indica
Group
Length = 242
Score = 176 bits (89), Expect = 1e-43
Identities = 209/244 (85%), Gaps = 6/244 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagc-acgtgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttga-ttcattg 125
|| |||||||||||||||||||||||| |||||||||| ||||| ||||||| | || |
Sbjct: 60 tcttcttattcaaaaaatttaagtaatgatttattcttatcatatcatttgagtccagag 119
Query: 126 ttaaatatactttcatgtacacatatagtt-ttacgtatttcnnnnnnnnnttt-aataa 183
|||| ||||| |||| ||||||||||||| ||| ||||| ||| |||||
Sbjct: 120 ctaaacatactatcatatacacatatagttactacatattttactaatttttttgaataa 179
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||| ||| ||||| ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 180 gacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaaca-tttgaaacggaggga 238
Query: 244 gtat 247
||||
Sbjct: 239 gtat 242
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 69 aataagaagaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 97.6 bits (49), Expect = 7e-20
Identities = 72/77 (93%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 242 atactccctccgtttcaaa-tgtttgacaccgttgactttttagc-acgtgtttgaccat 185
Query: 68 tcgtcttattcaaaaaa 84
|||||||||||||||||
Sbjct: 184 tcgtcttattcaaaaaa 168
>RF01058;MIR806;AAAA02019059.1/8776-9013 39946:Oryza sativa Indica
Group
Length = 238
Score = 176 bits (89), Expect = 1e-43
Identities = 202/237 (85%), Gaps = 4/237 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| |||| |||| |||||| | || ||||||| || || ||||||| ||
Sbjct: 1 atactccctccatttctaaatatttgacgtcatttacttttttaa-acatgtttgatgat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| |||||||| ||||||||||| ||||||||| || |||| ||||| ||||
Sbjct: 60 tcgtcttattaaaaaaatt-aagtaattattaattcttttcctatcattcgattcgttgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||||| |||||||||||| | |||||| |||||||||||
Sbjct: 119 taaatatactttcatgtatacatatagttttccatatttc-acaaatattttaataagac 177
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 178 gaacggttaaacatgtgctaaaaaatcaacggtgtcaaacatttagaaacggaggga 234
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
||||||||| ||||||||||||||||||| ||||||
Sbjct: 231 ctccgtttctaaatgtttgacaccgttgatttttta 196
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 176 bits (89), Expect = 1e-43
Identities = 190/223 (85%), Gaps = 4/223 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||| |||||| ||||||||||||||| || | |||||| ||| |||||||| |||||
Sbjct: 18 aaatatttgacgtcgttgactttttaaa-acatatttgactatttgtcttattaaaaaa- 75
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||| ||||
Sbjct: 76 -ttaagaaattattaattcttttcctatcatttgatttattgttaaatatacttttatgt 134
Query: 144 acacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtg 203
| |||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 135 atacatatagttttacatatttcacaatttttttgaataagacgaacggttaaacatgtg 194
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 195 ctaaaaagtcaacggtgtcaaatatttagaaacggagagagta 237
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||||||||| |||| |||||||||||||||||||| | || ||||| ||| ||
Sbjct: 237 tactctctccgtttctaaatatttgacaccgttgacttttt-agcacatgtttaaccgtt 179
Query: 69 cgtcttattcaaaaaa 84
||||||||||||||||
Sbjct: 178 cgtcttattcaaaaaa 163
>RF01058;MIR806;AAAA02009185.1/29593-29833 39946:Oryza sativa Indica
Group
Length = 241
Score = 174 bits (88), Expect = 4e-43
Identities = 205/242 (84%), Gaps = 5/242 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| ||||||||| |||||||||||| |||||| | || |||||||||||||
Sbjct: 2 tactccctccatttcaaaatatttgacaccgttaacttttcag-tatgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 61 tgttttattctaaaaatttaagtaattatttatttttttcatattatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtattt--cnnnnnnnnntttaataaga 185
||||||||| || ||||||||||||||||| ||||| | ||||||||||
Sbjct: 121 cgatatacttttatatacacatatagttttacatatttcacaattttttttttaataaga 180
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||||||| |||| | |||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 181 cgaacggtcaaac-tatgctaaaaagtcaacggtgtcaaatatttagaaacgaagggagt 239
Query: 246 at 247
||
Sbjct: 240 at 241
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/78 (85%), Gaps = 4/78 (5%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgacca 66
|||||| || |||||| |||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 241 atactcccttcgtttctaaatatttgacaccgttgactttttagcata---gtttgaccg 185
Query: 67 ttcgtcttattcaaaaaa 84
||||||||||| ||||||
Sbjct: 184 ttcgtcttattaaaaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||| |||||||||||| ||||| ||| ||||||||||
Sbjct: 41 aaaagttaacggtgtcaaatattttgaaatggagggagta 2
>RF01058;MIR806;ABRL01000721.1/4249-4012 65489:Oryza barthii
Length = 238
Score = 174 bits (88), Expect = 4e-43
Identities = 195/227 (85%), Gaps = 6/227 (2%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccattcgtcttatt 77
||||| |||| |||||| | ||||||||||| ||||| | ||||||||||| |||||||
Sbjct: 12 gtttctaaatatttgacgctgttgacttttttaaata--tatttgaccattcatcttatt 69
Query: 78 caaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatact 136
||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 70 aaaaaaatc-aagtaattattaattcttttcatatcatttgattcattgttaaatatact 128
Query: 137 ttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaa 196
|| ||||| |||||||||||||| |||||| |||||||||||| ||||| ||
Sbjct: 129 tttatgtatacatatagttttacatatttc-acaatttttttaataagacggacggtcaa 187
Query: 197 acatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||||||||||||||| || |||||||||| |||||||||||
Sbjct: 188 acatgtgctaaaaagtcaacagtatcaaacatttagaaacggaggga 234
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||||||||| || ||||||||||| | || ||||||||| | ||||||
Sbjct: 231 ctccgtttctaaatgtttgatactgttgacttttt-agcacatgtttgaccgtccgtctt 173
Query: 75 attcaaaaaatt 86
||| ||||||||
Sbjct: 172 attaaaaaaatt 161
>RF01058;MIR806;AP003517.3/100961-100723 39947:Oryza sativa Japonica
Group
Length = 239
Score = 174 bits (88), Expect = 4e-43
Identities = 203/240 (84%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||| |||| |||||||||||||||||||||||| || || ||||||||| ||
Sbjct: 2 tactccctcggttttaaaatgtttgacaccgttgactttctag-tatatgtttgaccgtt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttgttgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacg 187
||||||||||||||||||||||||| ||| || |||||| ||||||||||||
Sbjct: 121 aaatatactttcatgtacacatataatttcacatatttc-acaatttttttaataagacg 179
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|| ||||||| | | |||||| || |||||||| ||| |||| ||||||| |||||||
Sbjct: 180 aatggttaaatacgcactaaaacgttaacggtgttaaatatttcgaaacggatggagtat 239
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 72 tttaataagacgaacggtcaaacatatactagaaagtcaacggtgtcaaacattttaaaa 13
Query: 236 cggagggagta 246
| |||||||||
Sbjct: 12 ccgagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||| |||| ||| |||||||| || ||||| | ||| ||| |||||||||||||
Sbjct: 231 tccgtttcgaaatatttaacaccgttaacgttttag-tgcgtatttaaccattcgtctta 173
Query: 76 ttcaaaaaatt 86
|| ||||||||
Sbjct: 172 ttaaaaaaatt 162
>RF01058;MIR806;AC136787.4/71986-72222 39947:Oryza sativa Japonica
Group
Length = 237
Score = 172 bits (87), Expect = 2e-42
Identities = 197/231 (85%), Gaps = 4/231 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| |||||| ||||||||||||| || || ||||||| ||||| ||||
Sbjct: 8 ctccgtttctaaatatttgacgccgttgacttttttaa-acatgtttgatcattcatctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||| |||||| |||||| |||||| ||| ||||| || ||||||||||||||||||||||
Sbjct: 67 attgaaaaaaattaagtgattattaattattttcttatcatttgattcattgttaaatat 126
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggt 193
||||||||||| | |||||||||||| |||||| |||||||||||||| |||
Sbjct: 127 actttcatgtatatatatagttttacatatttc-acaacttttttaataagacgaatggt 185
Query: 194 taaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggaggga 243
||| |||| | |||||||||||||||||||||||||| |||||||||||
Sbjct: 186 caaatatgtacgtaaaaagtcaacggtgtcaaacatttagaaacggaggga 236
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 233 ctccgtttctaaatgtttgacaccgttgactttttacgtacatatttgaccattcgtctt 174
Query: 75 attcaaaaa 83
||| |||||
Sbjct: 173 attaaaaaa 165
>RF01058;MIR806;AAAA02032598.1/5908-6144 39946:Oryza sativa Indica
Group
Length = 237
Score = 172 bits (87), Expect = 2e-42
Identities = 206/241 (85%), Gaps = 7/241 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccat 67
||||| || |||||| |||| |||||| | ||||||||||| ||||| |||||||||||
Sbjct: 2 tactcccttcgtttctaaatatttgac-ctgttgacttttttaaata--tgtttgaccat 58
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgtt 127
|||||||||| |||||||| ||||||||||||||| |||| || ||||| || |||||||
Sbjct: 59 tcgtcttattaaaaaaatt-aagtaattatttattttttttat-catttaatccattgtt 116
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntt-taataagac 186
||||||||||||||||| |||||||||||||| |||||| || ||||||||
Sbjct: 117 aaatatactttcatgtatacatatagttttacatatttcataaaatttttggaataagac 176
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| |||||| |||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 177 gaacggtcaaacatatgctaaaaagtcaacggtatcaaacattcagaaacggagggagta 236
Query: 247 t 247
|
Sbjct: 237 t 237
Score = 67.9 bits (34), Expect = 7e-11
Identities = 71/81 (87%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgacca 66
|||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||||
Sbjct: 237 atactccctccgtttctgaatgtttgataccgttgactttttagcata--tgtttgaccg 180
Query: 67 ttcgtcttattcaaaaaattt 87
|||||||||||| ||||||||
Sbjct: 179 ttcgtcttattccaaaaattt 159
>RF01062;MIR812;AACV01006600.1/44361-44190 39947:Oryza sativa
Japonica Group
Length = 172
Score = 170 bits (86), Expect = 6e-42
Identities = 144/163 (88%), Gaps = 5/163 (3%)
Strand = Plus / Minus
Query: 53 tacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata- 111
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 162 tacgtgtttgaccattcgtcttatttaaaaaatttaagtaattatttattctttttatat 103
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
|||||||||||||||||||||||||||| ||||||| |||||||||| ||||||
Sbjct: 102 catttgattcattgttaaatatactttcgtgtacac--atagttttacatatttcacaaa 45
Query: 172 nnnnttt--aataagacgaacggttaaacatgtgctaaaaagt 212
||| ||||||||||||||| ||||||||||||||||||
Sbjct: 44 ctttttttaaataagacgaacggtcaaacatgtgctaaaaagt 2
>RF01058;MIR806;AAAA02023196.1/5910-5674 39946:Oryza sativa Indica
Group
Length = 237
Score = 170 bits (86), Expect = 6e-42
Identities = 206/243 (84%), Gaps = 9/243 (3%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttaattttttaaatacgtgtttgaccat 60
Query: 68 tcgtctta-ttcaaaaaatttaagtaattatttattcttttc-atacatttgattcattg 125
| |||||| || ||||||||||||||| |||||||||||||| | ||| ||||||| |
Sbjct: 61 ttgtcttatttaaaaaaatttaagtaagtatttattcttttcgaattattggattcatgg 120
Query: 126 ttaaatatactttcatgtacaca-tatagttttacgtatttcnnnnnnnnntttaataag 184
||||||||||||||||||||| ||||||||||| |||||| | | |||||
Sbjct: 121 ggaaatatactttcatgtacacattatagttttacatatttc--atgatgttgtgataag 178
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|||||| |||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 179 acgaac----aaacatatattaaaaagtcaacggtgtcaaatattttaaaacggagggag 234
Query: 245 tat 247
|||
Sbjct: 235 tat 237
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaa 51
|||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 237 atactccctccgttttaaaatatttgacaccgttgactttttaa 194
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 43 taaaaaattaacggtgtcaaatattttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02005830.1/14101-14346 39946:Oryza sativa Indica
Group
Length = 246
Score = 170 bits (86), Expect = 6e-42
Identities = 190/225 (84%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| || ||||| ||||||||| ||| ||||| |||| || |||| ||||||||||
Sbjct: 1 atactcccttcgttttaaaatgtttaacagtgttgatttttgaagtacgcgtttgaccat 60
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|| | ||||| |||||||||||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 61 tcattttatttaaaaaatttaagtaattattaattcttttcatatcatttgattcatggt 120
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||||| || |||||||||| |||||| ||| ||||||
Sbjct: 121 taaatatactttcatgtatacgtatagttttatatatttcataaattttttt-ataagat 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||| |||||| | |||||||||||||||||| |||||||||
Sbjct: 180 gaacggtcaaacatatactaaaaagtcaacggtgttaaacatttt 224
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 21 ttcaaaatgtttgacaccgttgacttttta 50
|||||||||||| |||||||||||||||||
Sbjct: 227 ttcaaaatgtttaacaccgttgacttttta 198
>RF01058;MIR806;CR855021.1/42350-42118 4530:Oryza sativa (rice)
Length = 233
Score = 170 bits (86), Expect = 6e-42
Identities = 167/192 (86%), Gaps = 5/192 (2%)
Strand = Plus / Plus
Query: 53 tacgtgtttgaccattcgtcttattc-aaaaaatttaagtaattatttattcttttcata 111
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||
Sbjct: 38 tacgtgtttgaccattcgtcttattcaaaaaaaattaagtaattatttattctttttata 97
Query: 112 -catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttc-nnn 169
|||||||||||| ||||| ||||| |||||||||||||||||||| | ||||||
Sbjct: 98 tcatttgattcatggttaa--atactatcatgtacacatatagttttgcatatttcacaa 155
Query: 170 nnnnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 229
|||||||||||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 156 attttttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgtcaaacatt 215
Query: 230 ttaaaacggagg 241
|| ||| |||||
Sbjct: 216 ttgaaatggagg 227
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| |||||||||||||||||||||| |||||||| || | ||||||| ||||||||
Sbjct: 226 ctccatttcaaaatgtttgacaccgttaactttttagc-acatatttgaccgttcgtctt 168
Query: 75 attcaaaaaa 84
||| ||||||
Sbjct: 167 attaaaaaaa 158
>RF01058;MIR806;AACV01025108.1/1606-1848 39947:Oryza sativa Japonica
Group
Length = 243
Score = 170 bits (86), Expect = 6e-42
Identities = 210/245 (85%), Gaps = 7/245 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| ||||| |||||||||||||| | ||||| ||||||
Sbjct: 1 atactccctccgtttcaaaatatttgaaaccgttgactttttggc-aggtgttggaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 60 tggtctaattcaaaaaatttaagtaattatttattcttttcatatcattggattcattg- 118
Query: 127 taaatatac-tttcatgtaca-catatagttttacgtatttcnnnnnnnnnttt-aataa 183
||||||||| ||||||||||| ||||||| ||||| |||||| ||| |||||
Sbjct: 119 taaatatacttttcatgtacaccatataggtttacatatttcaccaaattttttaaataa 178
Query: 184 gacgaacggt-taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggg 242
|||||| ||| ||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 179 gacgaatggtgaaaacacgtgctaaaaaggaaacggtgtcaaacattttgaaacggaggg 238
Query: 243 agtat 247
|||||
Sbjct: 239 agtat 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtg-tttgacca 66
|||||| ||||||||||||||||||||||||||| |||||| | ||||| ||| ||||
Sbjct: 243 atactccctccgtttcaaaatgtttgacaccgtttccttttt-agcacgtgttttcacca 185
Query: 67 ttcgtcttattcaaaaaattt 87
||||||||||| |||||||||
Sbjct: 184 ttcgtcttatttaaaaaattt 164
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 42 aaaaagtcaacggtttcaaatattttgaaacggagggagtat 1
>RF01062;MIR812;AP002537.2/60669-60502 39947:Oryza sativa Japonica
Group
Length = 168
Score = 168 bits (85), Expect = 2e-41
Identities = 141/161 (87%), Gaps = 5/161 (3%)
Strand = Plus / Minus
Query: 54 acgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-c 112
|||||||||||||||||||||||| |||||| |||||||||||||| |||||||| |
Sbjct: 157 acgtgtttgaccattcgtcttatttaaaaaa----agtaattatttatttttttcatatc 102
Query: 113 atttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnn 172
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 101 atttgattcattgttaaatatactttcatgtacacatatagttttatatatttcataaat 42
Query: 173 nnntttaataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||||||||||| ||| |||||||||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||| ||| ||||| |||||||||||||
Sbjct: 134 aataagacgaatggtcaaacacgtgctaaaaagtc 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccattcgtcttattcaaaaaattta 88
||||||| ||||||||||| ||||||||||
Sbjct: 17 tttgaccgttcgtcttattaaaaaaattta 46
>RF01058;MIR806;AAAA02035816.1/5791-6029 39946:Oryza sativa Indica
Group
Length = 239
Score = 168 bits (85), Expect = 2e-41
Identities = 177/204 (86%), Gaps = 6/204 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||||||||| ||||| |||||||| ||||||||||| ||| |
Sbjct: 39 tttttaaata--tgtttgaccattcgttttattaaaaaaatt-aagtaattattaattat 95
Query: 105 tttcatac-atttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|||| ||| |||||||||||||||||||||||||| || || |||||||||||||| |||
Sbjct: 96 tttcctaccatttgattcattgttaaatatacttttatatatacatatagttttacatat 155
Query: 164 ttcnnnnnnnnntttaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtc 222
||| |||||||||||||||||| ||| |||||| ||||||||||||||||||
Sbjct: 156 ttc-ataatttttttaataagacgaacggtcaaatatgtgcttaaaaagtcaacggtgtc 214
Query: 223 aaacattttaaaacggagggagta 246
|||||||| ||||||||||||||
Sbjct: 215 aaacatttagaaacggagggagta 238
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| ||||||||||||||||||||||||||| || | ||||||| ||
Sbjct: 238 tactccctccgtttctaaatgtttgacaccgttgactttttaagcacatatttgaccgtt 179
Query: 69 cgtcttattcaaaaaatt 86
||||||||| ||||||||
Sbjct: 178 cgtcttattaaaaaaatt 161
>RF01058;MIR806;ABRL01002061.1/457-692 65489:Oryza barthii
Length = 236
Score = 168 bits (85), Expect = 2e-41
Identities = 209/244 (85%), Gaps = 12/244 (4%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgtt-gactttttaaatacgtgtttgacca 66
|||||| ||||||||||||||||| ||| ||||| ||||||||| |||||||| ||||
Sbjct: 1 atactccctccgtttcaaaatgtt-gacgccgttagactttttatg-acgtgtttaacca 58
Query: 67 ttcgtcttattcaaaa-aatttaagtaattatttattcttttcata-catttgattcatt 124
| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 59 gttgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcatt 118
Query: 125 gttaaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataa 183
|||||||||||| ||| || ||||||||||| |||||| ||||||||
Sbjct: 119 gttaaatatact----tgt--acgtatagttttacatatttcataaattttttttaataa 172
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||||| |||||||| ||||||||| |||||||||||| ||||| |||||||||||
Sbjct: 173 gacgaacggtcaaacatgtactaaaaagttaacggtgtcaaatattttgaaacggaggga 232
Query: 244 gtat 247
||||
Sbjct: 233 gtat 236
Score = 81.8 bits (41), Expect = 4e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||||||||| |||||||||||| ||||||| | ||| ||||||||| |
Sbjct: 236 atactccctccgtttcaaaatatttgacaccgttaacttttt-agtacatgtttgaccgt 178
Query: 68 tcgtcttattcaaaaaa 84
|||||||||| ||||||
Sbjct: 177 tcgtcttattaaaaaaa 161
Score = 44.1 bits (22), Expect = 0.001
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 191 ggttaaacatgtgctaaaaagtc-aacggtgtcaaacattttaaaacggagggagtat 247
||||||||| || ||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 57 ggttaaacacgtcataaaaagtctaacggcgtcaa-cattttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02034417.1/5267-5034 39946:Oryza sativa Indica
Group
Length = 234
Score = 168 bits (85), Expect = 2e-41
Identities = 122/136 (89%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 112 catttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnn 171
||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 100 catttgattcattgttaaatatacttttatgtacacatatagttttacatattttataaa 159
Query: 172 nnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 160 tttttttaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 219
Query: 232 aaaacggagggagtat 247
||||||| ||||||||
Sbjct: 220 aaaacgg-gggagtat 234
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||| |||||||||||||||||||||||||| | || ||||||||| ||||||||||
Sbjct: 226 ccgttttaaaatgtttgacaccgttgacttttt-agcacatgtttgaccgttcgtcttat 168
Query: 77 tcaaaaaattta 88
| ||||||||||
Sbjct: 167 taaaaaaattta 156
Score = 48.1 bits (24), Expect = 6e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaag-tcaacggtgtcaaacattttaaaacg 237
||||||||||| ||| ||||| || ||||||| |||||| ||| |||||||||||||||
Sbjct: 80 aataagacgaatggtcaaacacgtactaaaaaaatcaacgatgttaaacattttaaaacg 21
>RF01058;MIR806;ABRL01002061.1/823-1053 65489:Oryza barthii
Length = 231
Score = 168 bits (85), Expect = 2e-41
Identities = 126/137 (91%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 19 gtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattc 78
|||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||
Sbjct: 13 gtttcaaaatatttgttaccgttaactttttagg-acgtgtttgaccattcgtcttattc 71
Query: 79 aaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactt 137
||||||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 72 aaaaaatttaaataattatttattcttttcatatcatttaatttattgttaaatatactt 131
Query: 138 tcatgtacacatatagt 154
|||||||||||||||||
Sbjct: 132 tcatgtacacatatagt 148
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 17 ccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||| |||||||||||||||||||||
Sbjct: 222 ccgtttcaaaatatttgacaccgttgacttttta 189
Score = 44.1 bits (22), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaac 236
||||||||||| ||| ||||| || ||||||||| |||||| |||| ||||| ||||
Sbjct: 70 aataagacgaatggtcaaacacgtcctaaaaagttaacggtaacaaatattttgaaac 13
>RF01058;MIR806;AACV01018965.1/447-687 39947:Oryza sativa Japonica
Group
Length = 241
Score = 168 bits (85), Expect = 2e-41
Identities = 160/183 (87%), Gaps = 5/183 (2%)
Strand = Plus / Plus
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattctttt-cata-catttgattcattg 125
|||||||||| |||||||| ||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 59 tcgtcttattaaaaaaatt-aagtaattatttattttttttcatatcatttgattcattg 117
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt--aataa 183
||||||||||||||||||||||||||| |||||| |||||| ||| |||||
Sbjct: 118 ttaaatatactttcatgtacacatataattttacatatttcataattttttttaaaataa 177
Query: 184 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 178 gacgaatagtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaa 237
Query: 244 gta 246
|||
Sbjct: 238 gta 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||||||||||||||||||||||||||||| | || |||||||| |||||||||
Sbjct: 234 ctccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttgactattcgtctt 176
Query: 75 att 77
|||
Sbjct: 175 att 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 71 tttaataagacgat-ggttaaacatgtgctaaaaagcatacggtgcataacattttgaaa 13
Query: 236 cggagggagtat 247
||||||||||||
Sbjct: 12 cggagggagtat 1
>RF01058;MIR806;AACV01014584.1/9650-9429 39947:Oryza sativa Japonica
Group
Length = 222
Score = 168 bits (85), Expect = 2e-41
Identities = 120/129 (93%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
|||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 9 ccgttttaaaatgtttgacaccgttgactttttag-tatgtgtttgactattcgtcttat 67
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
|||||||||||||||||||||||||| |||||||| ||||||||| || |||||||||||
Sbjct: 68 tcaaaaaatttaagtaattatttattattttcatatcatttgatttatcgttaaatatac 127
Query: 136 tttcatgta 144
|||||||||
Sbjct: 128 tttcatgta 136
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||| ||||||||| ||||||||||||||||||||| | ||| ||||||||| |||
Sbjct: 151 tttaataaaacgaacggtcaaacatgtgctaaaaagtcaatgatgttaaacattttgaaa 210
Query: 236 cggaggga 243
||||||||
Sbjct: 211 cggaggga 218
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 68 aataagacgaatagtcaaacacatactaaaaagtcaacggtgtcaaacattttaaaacgg 9
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||||||||| ||| | |||||||||||
Sbjct: 215 ctccgtttcaaaatgtttaacatcattgacttttta 180
>RF01058;MIR806;AAAA02005385.1/2925-2694 39946:Oryza sativa Indica
Group
Length = 232
Score = 167 bits (84), Expect = 9e-41
Identities = 143/160 (89%), Gaps = 2/160 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||| |||||||||||||||||| |||||||| || |||||| || ||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaactttttag-tatgtgtttaactat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 60 tcgtcttattcaaaaaagttaagaaattatttattcttttcataccatttgattcattat 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttc 166
|||||||| ||||||||| | |||||||||||| ||||||
Sbjct: 120 taaatatattttcatgtatatatatagttttacatatttc 159
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| |||||||| | ||||||||| |||||||||||||||||||||| ||
Sbjct: 69 aataagacgaatagttaaacacatactaaaaagttaacggtgtcaaacattttaaaatgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttga 43
|||||| |||||||||||||| ||||||||| ||||
Sbjct: 232 atactccctccgtttcaaaatatttgacaccattga 197
>RF01058;MIR806;AAAA02007519.1/45475-45716 39946:Oryza sativa Indica
Group
Length = 242
Score = 167 bits (84), Expect = 9e-41
Identities = 134/148 (90%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
||||||||| |||||||||||||| |||||| || |||||||| ||||||||||||| |
Sbjct: 13 tttcaaaatatttgacaccgttgattttttag-tatgtgtttgatcattcgtcttattta 71
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 72 aaaaatttaattatttatttattcttttcatatcatttgatttattgttaaatatacttt 131
Query: 139 catgtacacatatagttttacgtatttc 166
||||| ||| ||||||||||| ||||||
Sbjct: 132 catgtgcacgtatagttttacatatttc 159
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| | | ||||| | ||||||| |||||||||||||| ||||| ||| |
Sbjct: 69 aataagacgaatgatcaaacacatactaaaaaatcaacggtgtcaaatattttgaaatga 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 167 bits (84), Expect = 9e-41
Identities = 159/185 (85%), Gaps = 4/185 (2%)
Strand = Plus / Plus
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
|||||||||||||||||| ||||||||||||| ||| || || || ||||||||||||||
Sbjct: 53 ttcgtcttattcaaaaaaattaagtaattattaattattgtcttatcatttgattcattg 112
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt---aata 182
|||||||||||| |||||| |||||||||||||| |||||| ||| ||||
Sbjct: 113 ttaaatatacttacatgtatacatatagttttacatatttcataaaagtttttttgaata 172
Query: 183 agacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggg 242
|||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 173 agacaaacggttaagcatgtgctaaaaagtcaacggtgtcaaatatttagaaacggaggg 232
Query: 243 agtat 247
|||||
Sbjct: 233 agtat 237
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 237 atactccctccgtttctaaatatttgacaccgttgacttttta 195
>RF01058;MIR806;AAAA02009498.1/6852-7093 39946:Oryza sativa Indica
Group
Length = 242
Score = 165 bits (83), Expect = 4e-40
Identities = 204/242 (84%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| ||||||||||| || || || |||| || || | ||||||| ||
Sbjct: 2 tactccctccgtttcgaaatgtttgacgccattaacatttttaa-acatatttgaccgtt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattattaattcttttcttatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntt-taataagac 186
||||||| ||| ||||| |||||| |||||| ||||| || ||||||||
Sbjct: 121 aaatatatttttatgtaggcatataattttacatattttataaaaattttcgaataagac 180
Query: 187 gaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||||||| |||||| ||| |||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 181 gaacggtcaaacatatgcttaaaaaatcaacggtgtcaaacatttcaaaatggagggagt 240
Query: 246 at 247
||
Sbjct: 241 at 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| ||| ||||||||||||||||||| ||||||| | ||||||||| |
Sbjct: 242 atactccctccattttgaaatgtttgacaccgttgattttttaagcatatgtttgaccgt 183
Query: 68 tcgtcttattcaaaaa 83
||||||||||| ||||
Sbjct: 182 tcgtcttattcgaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| ||| |||| |||| || || || ||||||||||| ||||||
Sbjct: 69 aataagacgaacggtcaaatatgtttaaaaatgttaatggcgtcaaacatttcgaaacgg 10
Query: 239 agggagta 246
||||||||
Sbjct: 9 agggagta 2
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 196/234 (83%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||||||||||||||||||| ||||||||||||||| || ||||| ||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgataccgttgactttttagc-acatgtttaaccgtt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcatacatttgattcattgtta 128
||||||||| |||||||||||||||||||| ||| ||||| |||||||||| ||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattattaatttttttctatcatttgattcgttgtta 120
Query: 129 aatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacg 187
|||||| ||| ||||| | ||||| |||||| ||||| ||| ||||||||
Sbjct: 121 aatatatttttatgtagatatataattttacatattttataaaagtttttgaataagaca 180
Query: 188 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagg 241
||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||
Sbjct: 181 aacggttaaacatgtgctaaaaagtcaacggtgctaaatattttgaaacagagg 234
Score = 125 bits (63), Expect = 3e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 72 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacattttgaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 163/190 (85%), Gaps = 2/190 (1%)
Strand = Plus / Plus
Query: 59 tttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttg 117
|||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct: 51 tttgaccatttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 110
Query: 118 attcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntt 177
|||||||||||||||||||| ||||| || ||||||||||| |||| | ||
Sbjct: 111 attcattgttaaatatacttatatgtatacgtatagttttacatattccacaaaaatttt 170
Query: 178 t-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaac 236
| ||||||||||||||| ||| ||||| |||||||| |||||||||||| |||| ||||
Sbjct: 171 tgaataagacgaacggtcaaatatgtggtaaaaagttaacggtgtcaaatatttagaaac 230
Query: 237 ggagggagta 246
||||||||||
Sbjct: 231 ggagggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| |||| |||||||||||| |||||||| || | ||||||| ||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttacc-acatatttgaccgtt 182
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
>RF01058;MIR806;AC152969.1/99940-100170 39947:Oryza sativa Japonica
Group
Length = 231
Score = 165 bits (83), Expect = 4e-40
Identities = 127/139 (91%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 22 tcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaa 81
||||||| |||||| ||||||||||||| || | ||||||||| |||||||||||||||
Sbjct: 9 tcaaaatatttgacgccgttgacttttttaaaaa-tgtttgaccgttcgtcttattcaaa 67
Query: 82 aaatttaagtaattatttattcttttcata-catttgattcattgttaaatatactttca 140
||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||
Sbjct: 68 aaatttaagtaattattaattcttttcgtatcatttgatttattgttaaatatactttca 127
Query: 141 tgtacacatatagttttac 159
|||| ||||||||||||||
Sbjct: 128 tgtatacatatagttttac 146
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||| |||||| | ||||||||||||| |||||| |||||
Sbjct: 63 aataagacgaacggtcaaacatttttaaaaaagtcaacggcgtcaaatatttt 11
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 19 gtttcaaaatgtttgacaccgttgacttttt 49
||||| |||||||| ||||||||||||||||
Sbjct: 224 gtttctaaatgtttaacaccgttgacttttt 194
>RF01058;MIR806;AP008218.1/20023845-20024085 39947:Oryza sativa
Japonica Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 203/241 (84%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgacca 66
|||||| ||| ||||| |||| |||||| ||||||||||||| ||||| ||||||| ||
Sbjct: 1 atactccctctgtttctaaatatttgacgccgttgacttttttaaata--tgtttgatca 58
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattctttt-cata-catttgattcatt 124
||||||||||| |||||| ||||| ||||||| ||| |||| |||| ||||||||||||
Sbjct: 59 ttcgtcttatttaaaaaaattaagcaattattaattttttttcatatcatttgattcatg 118
Query: 125 gttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataag 184
|||||||||||||||| ||| |||||||||||||| |||| | |||||||||
Sbjct: 119 gttaaatatactttcacgtatacatatagttttacatattgcataattctttttaataag 178
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||| ||| |||||| |||||||||| ||||||| |||||||||| |||||||| |||
Sbjct: 179 acgaatggtcaaacatatgctaaaaagacaacggtatcaaacatttagaaacggagagag 238
Query: 245 t 245
|
Sbjct: 239 t 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgacttttta-aatacgtgtttgaccatt 68
|||||||||||||| |||||||||| ||||||| ||||||| ||| ||||||||||||
Sbjct: 239 actctctccgtttctaaatgtttgataccgttgtctttttagcata--tgtttgaccatt 182
Query: 69 cgtcttattcaaaa 82
||||||||| ||||
Sbjct: 181 cgtcttattaaaaa 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||| |||||| |||| |||| ||||||||||
Sbjct: 42 aaaaagtcaacggcgtcaaatatttagaaacagagggagtat 1
>RF01058;MIR806;AAAA02023115.1/13802-14036 39946:Oryza sativa Indica
Group
Length = 235
Score = 163 bits (82), Expect = 1e-39
Identities = 131/145 (90%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 23 caaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaa 82
|||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 12 caaaatgtttgatgccgttgactttttaaaca--tgtttgaccgttcgtcttattcaaaa 69
Query: 83 aatttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcat 141
|||||||||||||||| |||||||| || ||||||||| ||||||||||||||||| ||
Sbjct: 70 aatttaagtaattattaattctttttctatcatttgatttattgttaaatatacttttat 129
Query: 142 gtacacatatagttttacgtatttc 166
||| |||||||||||||| ||||||
Sbjct: 130 gtatacatatagttttacatatttc 154
Score = 58.0 bits (29), Expect = 6e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 64 aataagacgaacggtcaaacatgt-ttaaaaagtcaacggcatcaaacatttt 13
>RF01058;MIR806;AP003294.2/23086-22856 39947:Oryza sativa Japonica
Group
Length = 231
Score = 163 bits (82), Expect = 1e-39
Identities = 181/213 (84%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||||||| ||||| |||| |||||| | |||||| |||| || || ||||||| |||
Sbjct: 1 atactctctcagtttctaaatatttgacgctgttgacctttttaa-acatgtttgatcat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| |||||||| | ||||||||| |||| |||| || |||||||||||||||
Sbjct: 60 tcgtcttattaaaaaaatt-aggtaattattaattcatttcctatcatttgattcattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
|||||||||||||||||| | |||||||||||| |||||| |||||||||||
Sbjct: 119 taaatatactttcatgtatatatatagttttacatatttcacaaatttttttaataagac 178
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggt 219
|||| |||||||||||||||||||| ||||||
Sbjct: 179 gaacaattaaacatgtgctaaaaagttaacggt 211
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 163 bits (82), Expect = 1e-39
Identities = 199/236 (84%), Gaps = 5/236 (2%)
Strand = Plus / Plus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccatt 68
|||||||||||||| |||| |||||| | |||||||||| ||||| | |||||| ||
Sbjct: 3 actctctccgtttctaaatatttgacgtcattgacttttttaaata--tatttgacagtt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
| |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 61 catcttattcaaaaaatttaagtaattattaattctttttctatcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
||||||||||| ||||| |||| ||||||||| |||||| ||| ||||||||
Sbjct: 121 aaatatacttttatgtatacatgtagttttacatatttcacaaaagtttttaaataagac 180
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggg 242
||| ||| ||||||| ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 181 gaatggtcaaacatgagctaaaaagtcaacggtgttaaatatttagaaacggaggg 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| ||| ||||||||||||||||| | | ||||||||||||||||||
Sbjct: 234 ctccgtttctaaatatttaacaccgttgactttttagct-catgtttgaccattcgtctt 176
Query: 75 attcaaaaa 83
||| |||||
Sbjct: 175 atttaaaaa 167
>RF01058;MIR806;AP008211.1/11219819-11220068 39947:Oryza sativa
Japonica Group
Length = 250
Score = 163 bits (82), Expect = 1e-39
Identities = 192/230 (83%), Gaps = 10/230 (4%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||
Sbjct: 22 aaatgtttgacgtcgttgactttttagc-acatatttgactgttcgtcttattcaaaaaa 80
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 81 tttaagtaattattaattcttttcttatcatttgattcattgttaaatatattttcatgt 140
Query: 144 acacatatagttttacgtatttcnnnnnnnnnttt--------aataagacgaacggtta 195
| |||||| |||||| |||||| ||| |||||||| |||||| |
Sbjct: 141 aggcatataattttacatatttcacaaaagtttttaacttttgaataagacaaacggtca 200
Query: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 201 aacatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggagt 250
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 10 actctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattc 69
|||| |||||||||||||| |||||||||||||||||||| | || ||||||||| ||
Sbjct: 250 actccctccgtttcaaaatatttgacaccgttgacttttt-agcacatgtttgaccgttt 192
Query: 70 gtcttattcaaaa 82
|||||||||||||
Sbjct: 191 gtcttattcaaaa 179
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
|||||||||||| || ||| ||||||||||||||||||| |||||||||||
Sbjct: 73 aataagacgaacagtcaaatatgtgctaaaaagtcaacgacgtcaaacattt 22
>RF01058;MIR806;AACV01017341.1/5880-5641 39947:Oryza sativa Japonica
Group
Length = 240
Score = 163 bits (82), Expect = 1e-39
Identities = 201/241 (83%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||| || | |||| |||| | ||||||| ||||| || || ||||| | |||
Sbjct: 1 atactccctccattcctaaatatttggcgccgttgatttttttaa-acatgtttaatcat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||||||||||||||| |||||||| || ||||||||| |||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattattaattctttttctatcatttgatttattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagac 186
| |||||||||||||||| | |||||||||| | |||||| |||||||||||
Sbjct: 120 tgaatatactttcatgtatatatatagttttgcatatttcataaatttttttaataagac 179
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||| |||||| |||| || |||||| ||||||||||||||||| ||||||||||||||
Sbjct: 180 gaatagttaaatatgtactgaaaagttaacggtgtcaaacatttagaaacggagggagta 239
Query: 247 t 247
|
Sbjct: 240 t 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| ||||||||||||||||| || |||| | ||| | ||| || ||
Sbjct: 240 atactccctccgtttctaaatgtttgacaccgttaac-ttttcagtacatatttaactat 182
Query: 68 tcgtcttattcaaaaaattta 88
|||||||||| ||||||||||
Sbjct: 181 tcgtcttattaaaaaaattta 161
>RF01058;MIR806;AAAA02027729.1/13846-13614 39946:Oryza sativa Indica
Group
Length = 233
Score = 161 bits (81), Expect = 6e-39
Identities = 131/144 (90%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgacttttt-aaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||| ||||||||||||| ||||| ||||||||| || ||||||||||||||
Sbjct: 11 aaatgtttgacgccgttgacttttttaaata--tgtttgaccgtttgtcttattcaaaaa 68
Query: 84 atttaagtaattatttattcttttcatac-atttgattcattgttaaatatactttcatg 142
||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||| |||
Sbjct: 69 atttaagcaattattaattcttttcctaccatttgattcattgttaaatatacttttatg 128
Query: 143 tacacatatagttttacgtatttc 166
|| |||||||||||||| ||||||
Sbjct: 129 tatacatatagttttacatatttc 152
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
|||||||| |||||| |||||| | ||||||||||||| |||||||||||
Sbjct: 62 aataagacaaacggtcaaacatatttaaaaaagtcaacggcgtcaaacattt 11
>RF01058;MIR806;AACV01020896.1/24752-24993 39947:Oryza sativa
Japonica Group
Length = 242
Score = 161 bits (81), Expect = 6e-39
Identities = 208/244 (85%), Gaps = 8/244 (3%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgacca 66
|||||| ||||||||| |||| || ||| ||||||||||||| ||||| ||||||||||
Sbjct: 1 atactccctccgtttctaaatattcgacgccgttgacttttttaaata--tgtttgacca 58
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
|| |||||||||||||| |||||||||||||| ||||||||| || |||||||| ||||
Sbjct: 59 ttagtcttattcaaaaagtttaagtaattattaattcttttcctattatttgatttattg 118
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataaga 185
|||||||||| | ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 119 ttaaatatacgtatatgtatacatatagttttacgtatttc-aaaaaaagtttaataaga 177
Query: 186 cgaacggttaaacatgt-gctaaaaagtcaacggtgtcaaacat-ttta-aaacggaggg 242
||||||| |||||||| | |||||| |||||||||||||| || |||| ||||||||||
Sbjct: 178 tgaacggtcaaacatgtggttaaaaactcaacggtgtcaaaaatatttagaaacggaggg 237
Query: 243 agta 246
||||
Sbjct: 238 agta 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttatt 77
|||||||||||||| ||||||| || ||||||||| ||| |||||||
Sbjct: 218 tttgacaccgttgagtttttaaccacatgtttgaccgttcatcttatt 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 206 aaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||| ||| || |||| |||||||||||||||
Sbjct: 42 aaaaagtcaacggcgtcgaatatttagaaacggagggagtat 1
>RF01058;MIR806;AAAA02030117.1/2428-2190 39946:Oryza sativa Indica
Group
Length = 239
Score = 161 bits (81), Expect = 6e-39
Identities = 178/209 (85%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||||||||||| |||||||||||| ||| | ||||||||| || ||||||||||||||
Sbjct: 17 aaaatgtttgacgtcgttgacttttttaat-catgtttgaccttttgtcttattcaaaaa 75
Query: 84 atttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatg 142
||||||||| || || |||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 76 atttaagtattttttaattcttttcatatcatttgattcattgttaaatatatttttatg 135
Query: 143 tacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgt 202
|| ||||||||||||| |||||| |||||||||||||||||| |||||| |
Sbjct: 136 tatacatatagttttatatatttc-ataatttttttaataagacgaacggtcaaacatat 194
Query: 203 gctaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| ||||||||||||
Sbjct: 195 ttaaaaaagtcaacggcgtcaaacatttt 223
Score = 67.9 bits (34), Expect = 7e-11
Identities = 59/65 (90%), Gaps = 3/65 (4%)
Strand = Plus / Minus
Query: 23 caaaatgtttgacaccgttgact-ttttaaatacgtgtttgaccattcgtcttattcaaa 81
||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||| |||
Sbjct: 224 caaaatgtttgacgccgttgacttttttaaata--tgtttgaccgttcgtcttattaaaa 167
Query: 82 aaatt 86
|||||
Sbjct: 166 aaatt 162
>RF01058;MIR806;AP008208.1/31673629-31673391 39947:Oryza sativa
Japonica Group
Length = 239
Score = 161 bits (81), Expect = 6e-39
Identities = 176/207 (85%), Gaps = 4/207 (1%)
Strand = Plus / Plus
Query: 26 aatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtcttattcaaaaaa 84
||||||| |||||||| |||||||| ||| ||||||||||||||| ||||| ||||||
Sbjct: 19 aatgtttaacaccgttaactttttagcata--tgtttgaccattcgttttatttaaaaaa 76
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| ||||||||| || ||||||||| ||||||||||||| ||| ||||
Sbjct: 77 tttaagtaattattaattcttttcctatcatttgatttattgttaaatatatttttatgt 136
Query: 144 acacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggttaaacatgtg 203
| |||||| ||||| |||||| |||||||||||||||||||||||||| |
Sbjct: 137 aagcatataattttatatatttcacaaaaatttttaataagacgaacggttaaacatggg 196
Query: 204 ctaaaaagtcaacggtgtcaaacattt 230
|||||| |||||||||||||||||||
Sbjct: 197 ttaaaaaatcaacggtgtcaaacattt 223
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||| ||||| ||| |||||| ||||||||||| |||||||| ||||||| |||||||
Sbjct: 69 aataaaacgaatggtcaaacatatgctaaaaagttaacggtgttaaacattccaaaacgg 10
Query: 239 agggagtat 247
| |||||||
Sbjct: 9 atggagtat 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaa 51
||||||||||||||||||| |||||||
Sbjct: 223 aaatgtttgacaccgttgattttttaa 197
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 161 bits (81), Expect = 6e-39
Identities = 201/236 (85%), Gaps = 7/236 (2%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| |||||| | ||||||||||| || || ||||||| ||||||||||
Sbjct: 8 ctccgtttctaaatatttgacgctgttgacttttttaa-acatgtttgatcattcgtctt 66
Query: 75 attcaaaaaatttaagtaattatt-tattcttttcata-catttgattcattgttaaata 132
||| ||||| ||||||||||||| |||| ||||| || |||||||||||||||||||||
Sbjct: 67 attaaaaaa--ttaagtaattattatatttttttcctatcatttgattcattgttaaata 124
Query: 133 tactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacgg 192
|| ||||||||| |||||||||||||| ||| || || ||||||||||| ||
Sbjct: 125 tattttcatgtatacatatagttttacatatatc-aaaaatttttaaataagacgaaagg 183
Query: 193 ttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
| |||||||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 184 tcaaacatgtgcttaaaaagtcaacggtgtcaaatatttagaaacggagggagtat 239
Score = 87.7 bits (44), Expect = 7e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| |||||||||||||||||||||| || ||||||||| |
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttaagcacatgtttgacctt 180
Query: 68 tcgtcttattcaaaaa 83
|||||||||| |||||
Sbjct: 179 tcgtcttatttaaaaa 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| | | |||||||| ||||||||||| | |||||| |||| |||
Sbjct: 72 tttaataagacgaatgatcaaacatgtttaaaaaagtcaacagcgtcaaatatttagaaa 13
Query: 236 cggaggg 242
|||||||
Sbjct: 12 cggaggg 6
>RF01058;MIR806;AP008209.1/14794453-14794693 39947:Oryza sativa
Japonica Group
Length = 241
Score = 161 bits (81), Expect = 6e-39
Identities = 204/243 (83%), Gaps = 5/243 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgacca 66
|||||||||||||||| |||| ||| || ||||| ||||||| ||||| |||||||||
Sbjct: 1 atactctctccgtttctaaatatttaacgccgttaacttttttaaata--tgtttgaccg 58
Query: 67 ttcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||||||||||||||||||||| || ||||||||| || ||||| ||||||||
Sbjct: 59 ttcgtcttattcaaaaaatttaagtaatttttaattcttttcctatcatttaattcattg 118
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataag 184
|||||||||||| | ||| |||||||||||||| |||||| ||| ||||||
Sbjct: 119 ttaaatatacttatacgtatacatatagttttacatatttcacaaaagtttttgaataag 178
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
||||||||| |||||||| |||||| |||||| ||||||| |||| |||| ||| |||
Sbjct: 179 acgaacggtcaaacatgtaataaaaaatcaacgatgtcaaatatttagaaacagagtgag 238
Query: 245 tat 247
|||
Sbjct: 239 tat 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||| ||||| |||| ||||||| |||||| |||||| ||| ||||||||| |
Sbjct: 241 atactcactctgtttctaaatatttgacatcgttgattttttat-tacatgtttgaccgt 183
Query: 68 tcgtcttattcaaaaa 83
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
>RF01058;MIR806;AACV01020567.1/776-1014 39947:Oryza sativa Japonica
Group
Length = 239
Score = 159 bits (80), Expect = 2e-38
Identities = 155/179 (86%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 71 tcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaa 129
||||||||||||| |||||||||||||| |||||||| || ||| ||||||||||||||
Sbjct: 62 tcttattcaaaaa-tttaagtaattattaattctttttctatcatatgattcattgttaa 120
Query: 130 atatactttcatgtacacatatagttttacgtatttcnnnnnnnnntttaa-taagacga 188
||||| ||| ||||| |||||| |||||| |||||| ||||| ||| ||||
Sbjct: 121 atatatttttatgtaggcatatacttttacatatttcacaaaagtttttaaataaaacga 180
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 239
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 239 atactccctccgtttcaaaatgtttgacaccgttgacttttta 197
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 157/183 (85%), Gaps = 2/183 (1%)
Strand = Plus / Plus
Query: 60 ttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttga 118
||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||
Sbjct: 51 ttgaccattcgtcttattcaaaaaatttaagtaattattaatttttttcctatcatttga 110
Query: 119 ttcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt 178
|||||||||| ||||| ||| ||||| ||||||||||||| |||||| |||
Sbjct: 111 ttcattgttatatatatttttatgtagacatatagttttatatatttcacaaaagctttt 170
Query: 179 -aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacg 237
|| |||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 171 aaaaaagacgaacggtcaaacatgtgctaaaaagtcaatggtgtcaaatatttagaaacg 230
Query: 238 gag 240
|||
Sbjct: 231 gag 233
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 12 tctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||||||| |||| ||||||||| |||||||||||
Sbjct: 236 tctctccgtttctaaatatttgacaccattgacttttta 198
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 159 bits (80), Expect = 2e-38
Identities = 136/152 (89%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||||||||||||||||||||||||||||| | || ||||||||| ||||||||
Sbjct: 2 ctccgtttcaaaatgtttgacaccgttgacttttt-agcacatgtttgaccgttcgtctt 60
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||||||||| |||||||| ||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 61 attcaaaaattttaagtagttattaattcttttcctatcatttgattcattgttaaatat 120
Query: 134 actttcatgtacacatatagttttacgtattt 165
| ||| ||||| |||||| |||||| |||||
Sbjct: 121 atttttatgtaggcatataattttacatattt 152
Score = 109 bits (55), Expect = 2e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 63 aataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 4
Query: 239 agg 241
|||
Sbjct: 3 agg 1
>RF01058;MIR806;AC135190.2/76456-76217 39947:Oryza sativa Japonica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 108/115 (93%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 39 tttttaaata--tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattct 96
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagtttta 158
||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 97 tttcatatcatttgattcattgttaaatatacttttatgtatacatatagtttta 151
>RF01058;MIR806;AC137592.2/48121-47884 39947:Oryza sativa Japonica
Group
Length = 238
Score = 159 bits (80), Expect = 2e-38
Identities = 169/198 (85%), Gaps = 4/198 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||| ||||| ||||| |||||||||||||||||| | |||||
Sbjct: 39 tttttaaata--tgtttgaccgttcgttttatt-aaaaaatttaagtaattactaattct 95
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|||| || |||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 96 tttcctatcatttgattcattgttaaatatacttatatgtatacatatagttttacatat 155
Query: 164 ttcnnnnnnnnntttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 223
| | ||||| |||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 156 tacacggaagtttttaaaaagacgaacggttaaatatgtgctaaaaagttaacggtgtca 215
Query: 224 aacattttaaaacggagg 241
|| |||| ||||| ||||
Sbjct: 216 aatatttaaaaacagagg 233
>RF01062;MIR812;AAAA02000693.1/35465-35637 39946:Oryza sativa Indica
Group
Length = 173
Score = 157 bits (79), Expect = 9e-38
Identities = 98/103 (95%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
|||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 159 tgtttgaccatttgtcttattcaaaaaatttaagtaattatttattccttttatatcatc 100
Query: 116 tgattcattgttaaatatactttcatgtacacatatagtttta 158
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tgattcattgttaaatatactttcatgtacacatatagtttta 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 acgtgtttgaccattcgtcttattcaaaaaa 84
|||||||||||||||||| ||||| ||||||
Sbjct: 12 acgtgtttgaccattcgttttattaaaaaaa 42
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||| || ||| |||||||||||||||||||
Sbjct: 139 aataagacaaatggtcaaacatgtgctaaaaagtc 173
>RF01058;MIR806;AAAA02039083.1/458-246 39946:Oryza sativa Indica
Group
Length = 213
Score = 157 bits (79), Expect = 9e-38
Identities = 121/131 (92%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
|||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 2 tactctctccgttttaaaatgtttgacaccgttgac-ttttaagtacgtgtttgatcatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
|| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 61 tgttttatt-aaaaaatttaagtaattatttattcttttcatatcatttgattcattatt 119
Query: 128 aaatatacttt 138
||||| |||||
Sbjct: 120 aaatacacttt 130
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 207 aaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 41 aaaagtcaacggtgtcaaacattttaaaacggagagagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtc--aaacattttaaaac 236
|||||||| |||||| |||||| ||||||||| ||||||||||| |||||||| ||||
Sbjct: 143 aataagacaaacggtcaaacatatgctaaaaaatcaacggtgtcaaaaacatttcgaaac 202
Query: 237 ggagggagtat 247
||| |||||||
Sbjct: 203 ggaaggagtat 213
>RF01058;MIR806;AACV01022117.1/107-349 39947:Oryza sativa Japonica
Group
Length = 243
Score = 157 bits (79), Expect = 9e-38
Identities = 199/238 (83%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| || |||||| |||| |||||| | |||||||||||||| | ||||| ||||||
Sbjct: 2 tactccctgcgtttctaaatatttgacgctgttgactttttaaaaatatgtttaaccatt 61
Query: 69 cgtcttattcaaaaaa-tttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||| |||||| |||||||||| ||| |||||||| || |||||||||||||||
Sbjct: 62 cgtcttattaaaaaaaatttaagtaatcattagttcttttcctatcatttgattcattgt 121
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||||||| ||||| |||||||||||||| |||||| ||| ||||| |
Sbjct: 122 taaatatacttttatgtatacatatagttttacatatttcacaaaagtttttgaataaaa 181
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 243
|||||||| |||||| |||||||||||||| || || ||| |||| |||||||||||
Sbjct: 182 cgaacggtcaaacatctgctaaaaagtcaatggcgttaaatatttagaaacggaggga 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacat-gtgctaaaaagtcaacggtgtcaaacattttaaa 234
|||||||||||||| |||||||||| | |||||||||||| | |||||| |||| ||
Sbjct: 73 tttaataagacgaatggttaaacatatttttaaaaagtcaacagcgtcaaatatttagaa 14
Query: 235 acggagggagta 246
||| ||||||||
Sbjct: 13 acgcagggagta 2
>RF01058;MIR806;FJ032627.1/93112-93341 4538:Oryza glaberrima
(African rice)
Length = 230
Score = 157 bits (79), Expect = 9e-38
Identities = 183/217 (84%), Gaps = 4/217 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| |||| |||||| |||||||| ||||||| | |||||||||||
Sbjct: 1 atactccctccgtttttaaatatttgacgccgttgaccttttaaa-atatgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| || |||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 60 ttgttttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt--aataag 184
||||||||||| |||| | |||||||||||| |||||| ||| ||||||
Sbjct: 120 taaatatacttatatgtgtatatatagttttacatatttcacaaaaagtttttaaataag 179
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgt 221
||||| |||||||| ||||||||||||| ||||||||
Sbjct: 180 acgaatggttaaacctgtgctaaaaagttaacggtgt 216
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||| |||||||| |||||| |||| ||||||||||||||||
Sbjct: 43 taaaaggtcaacggcgtcaaatatttaaaaacggagggagtat 1
>RF01062;MIR812;AP008212.1/3897291-3897462 39947:Oryza sativa
Japonica Group
Length = 172
Score = 155 bits (78), Expect = 4e-37
Identities = 139/158 (87%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattattta-ttcttttcata-cat 114
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 158 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattttttttcatatcat 99
Query: 115 ttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnn 174
||||||||||||||||| |||||||| ||||| | |||||||||| ||||||
Sbjct: 98 ttgattcattgttaaatttactttcacgtacatacatagttttacatatttc-ataattt 40
Query: 175 ntttaataagacgaacggttaaacatgtgctaaaaagt 212
|||||||||||||| ||| ||||||||||||||||||
Sbjct: 39 ttttaataagacgaatggtcaaacatgtgctaaaaagt 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatt 86
||||||||||||||||||||| ||||||||
Sbjct: 15 tgtttgaccattcgtcttattaaaaaaatt 44
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||| ||| |||||||| ||||||||||
Sbjct: 138 aataagacgaatggtcaaacatgtactaaaaagtc 172
>RF01062;MIR812;AAAA02019701.1/16876-17044 39946:Oryza sativa Indica
Group
Length = 169
Score = 155 bits (78), Expect = 4e-37
Identities = 141/161 (87%), Gaps = 4/161 (2%)
Strand = Plus / Minus
Query: 54 acgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-c 112
|||||||||||||||||||||||| |||||||||||||||||||| ||| |||| || |
Sbjct: 158 acgtgtttgaccattcgtcttatt-aaaaaatttaagtaattattaattatttttctatc 100
Query: 113 atttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnn 172
|||||||||||||||||||||||||| ||||||| |||||||||||| |||||
Sbjct: 99 atttgattcattgttaaatatacttttatgtacatatatagttttacatattt--taaat 42
Query: 173 nnntttaataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||||||||||| |||||||||||||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaa 89
||||||||| ||||||||||| |||||||||||
Sbjct: 15 tgtttgaccgttcgtcttattaaaaaaatttaa 47
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||||||| ||| ||||| || ||||||||||
Sbjct: 132 tttaataagacgaatggtcaaacacgtcctaaaaagtc 169
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 155 bits (78), Expect = 4e-37
Identities = 189/225 (84%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 20 tttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattca 79
|||| |||| |||||| |||||||||||||||| | ||||||||| ||||||||||| |
Sbjct: 13 tttctaaatatttgacgccgttgactttttaaa-atatgtttgaccgttcgtcttattta 71
Query: 80 aaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatacttt 138
|||| |||||||||||||| ||| ||||| || ||||||||||||| ||||||||||||
Sbjct: 72 aaaattttaagtaattattaattattttcctatcatttgattcattattaaatatactta 131
Query: 139 catgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaa 197
||||| || ||||||||||| |||||| ||| ||||||||||||||| |||
Sbjct: 132 tatgtatacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaa 191
Query: 198 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggg 242
|||||||||||| ||||||||| | ||| |||| ||||||||||
Sbjct: 192 catgtgctaaaatgtcaacggtattaaatatttagaaacggaggg 236
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||||||||||| |||||| | |||||||||||||| |||||| ||||
Sbjct: 69 aataagacgaacggtcaaacatattttaaaaagtcaacggcgtcaaatattt 18
Score = 50.1 bits (25), Expect = 2e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| ||| | ||||||||| ||||| || ||||||||| ||||||||
Sbjct: 234 ctccgtttctaaatatttaataccgttgacattttagc-acatgtttgaccgttcgtctt 176
Query: 75 attcaaaaa 83
|||||||||
Sbjct: 175 attcaaaaa 167
>RF01058;MIR806;AL606460.3/33605-33845 39947:Oryza sativa Japonica
Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 181/213 (84%), Gaps = 4/213 (1%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| |||| | ||||||| ||||| || || ||||||||||||||||||
Sbjct: 8 ctccgtttctaaatatttggcgccgttgatttttttaa-acatgtttgaccattcgtctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||| |||||||| ||||||||||| ||||||||| || ||||||||||||| ||||||||
Sbjct: 67 attaaaaaaatt-aagtaattattaattcttttcttatcatttgattcattattaaatat 125
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggt 193
||||| ||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 126 acttttatgtatacatatagttttgtatattttacaattatttttaataagacgaacggt 185
Query: 194 taaacatgtgc-taaaaagtcaacggtgtcaaa 225
||| |||||| |||||||||||||||||||||
Sbjct: 186 caaatatgtgcttaaaaagtcaacggtgtcaaa 218
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaa 82
|||||||||||||||||||||| || | ||||||| ||||||||||| ||||
Sbjct: 218 tttgacaccgttgactttttaagcacatatttgaccgttcgtcttattaaaaa 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| ||| |||||||| ||||| ||||||| | |||| |||| |||
Sbjct: 72 tttaataagacgaatggtcaaacatgtttaaaaaaatcaacggcgccaaatatttagaaa 13
Query: 236 cggagggagta 246
|||||| ||||
Sbjct: 12 cggaggtagta 2
>RF01058;MIR806;AAAA02033487.1/5308-5068 39946:Oryza sativa Indica
Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 190/225 (84%), Gaps = 4/225 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||||||||||||| || ||||||| || || | ||||||| ||||||||||||||||||
Sbjct: 19 aaatgtttgacaccattaacttttttaa-acatatttgaccgttcgtcttattcaaaaaa 77
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 78 tttaagtaattattaattctttttttatcatttgattcattgttaaatatacttt-atgt 136
Query: 144 acacatatagttttacgtatttc-nnnnnnnnntttaataagacgaacggttaaacatgt 202
| |||||||||||||| |||||| |||||||||||||||||| |||||| |
Sbjct: 137 atacatatagttttacatatttcacaaaaaaattttaataagacgaacggtcaaacatat 196
Query: 203 gctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||||||| ||||| |||||| || | | ||||||||||||||
Sbjct: 197 ttaaaaaagttaacggcgtcaaatatctaagaacggagggagtat 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||||||||||| ||| |||| ||||||| || ||||||||||||||
Sbjct: 70 aataagacgaacggtcaaatatgtttaaaaaagttaatggtgtcaaacattt 19
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 155 bits (78), Expect = 4e-37
Identities = 146/169 (86%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||| ||| |||||||||||||||||| ||||||||||||| ||||||||| || ||||
Sbjct: 26 tgtttaaccgttcgtcttattcaaaaaaattaagtaattattaattcttttcctatcatt 85
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
| |||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 86 taattcattgttaaatatacttatatgtatacatatagttttatatatttcacaaaagtt 145
Query: 176 ttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 223
||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 146 tttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 194
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 32 tgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 194 tgacaccgttgactttttagc-acatgtttgaccgttcgtcttattcaaaaa 144
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacat 200
||||||||||||||||||||||
Sbjct: 46 aataagacgaacggttaaacat 25
>RF01058;MIR806;AAAA02028052.1/8526-8286 39946:Oryza sativa Indica
Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 125/137 (91%), Gaps = 4/137 (2%)
Strand = Plus / Plus
Query: 32 tgacaccgttgactt-tttaaatacgtgtttgaccattcgtcttattcaaaaaatttaag 90
|||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 25 tgacgccgttgacttctttaaata--tgtttgaccgttcgtcttattcaaaaaatttaag 82
Query: 91 taattatttattcttttcata-catttgattcattgttaaatatactttcatgtacacat 149
|||||||| ||||||||| || ||||||||||||||||||||||||||| ||||| ||||
Sbjct: 83 taattattaattcttttcctaccatttgattcattgttaaatatacttttatgtatacat 142
Query: 150 atagttttacgtatttc 166
|||| ||||| ||||||
Sbjct: 143 atagctttacatatttc 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaa 83
|||||||||||||||||||||||||||
Sbjct: 193 tgtttgaccattcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02022077.1/26402-26639 39946:Oryza sativa Indica
Group
Length = 238
Score = 155 bits (78), Expect = 4e-37
Identities = 171/201 (85%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 32 tgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagt 91
|||| ||||||||||||| || || ||||||||| |||||||||||||||||||||||||
Sbjct: 26 tgacgccgttgacttttttaa-acatgtttgaccgttcgtcttattcaaaaaatttaagt 84
Query: 92 aattatttattcttttcata-catttgattcattgttaaatatactttcatgtacacata 150
||||||| ||||||||| || ||||| ||||||||||||||||||||| ||| |||||
Sbjct: 85 aattattaattcttttcctatcattttattcattgttaaatatacttttgcgtatacata 144
Query: 151 tagttttacgtatttc-nnnnnnnnntttaataagacgaacggttaaacatgtgctaaaa 209
||||||||| |||||| |||||||||||||| ||| |||||||| |||||
Sbjct: 145 tagttttacatatttcacaaaaaaattttaataagacgaatggtcaaacatgttttaaaa 204
Query: 210 agtcaacggtgtcaaacattt 230
||||||||| |||||| ||||
Sbjct: 205 agtcaacggcgtcaaatattt 225
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttatt 77
|||| |||||| |||||||||||||||| || |||||||||||||||||||||
Sbjct: 225 aaatatttgacgccgttgactttttaaa-acatgtttgaccattcgtcttatt 174
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 223
||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 70 aataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtca 26
>RF01058;MIR806;AC136481.6/23965-23723 39947:Oryza sativa Japonica
Group
Length = 243
Score = 155 bits (78), Expect = 4e-37
Identities = 128/142 (90%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
||||||||||| ||||||||||||| || || ||||||||| ||||||||||||||||||
Sbjct: 19 aaatgtttgacgccgttgacttttttaa-acatgtttgaccgttcgtcttattcaaaaaa 77
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||| ||||||| ||||||||| || ||||| ||||||||||||||||| ||| ||||
Sbjct: 78 tttaagaaattattaattcttttcctatcatttaattcattgttaaatataattttatgt 137
Query: 144 acacatatagttttacgtattt 165
| | ||||||||||||||||||
Sbjct: 138 atatatatagttttacgtattt 159
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 70 aataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 19
>RF01058;MIR806;AACV01002849.1/2306-2553 39947:Oryza sativa Japonica
Group
Length = 248
Score = 155 bits (78), Expect = 4e-37
Identities = 141/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| ||||||||| |||| |||||| | |||||||||||||| || || |||||||||
Sbjct: 2 tactccctccgtttctaaatatttgacgctgttgactttttaaa-acatgcttgaccatt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||| ||||| |||||||| ||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 61 cgtattattaaaaaaatt-aagtaattattaattcttttcctatcatttgattcattgtt 119
Query: 128 aaatatactttcatgtacacatatagttttacgtattt 165
||||||||||||| ||| |||||||||||||| |||||
Sbjct: 120 aaatatactttcacgtatacatatagttttacatattt 157
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
|||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 247 tactctttccgtttgtaaatgtttgacaccgttgacttttta 206
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||| ||||| ||| || ||||| |||||||||||| | |||||| |||| |||
Sbjct: 72 tttaataatacgaatggtcaagcatgttttaaaaagtcaacagcgtcaaatatttagaaa 13
Query: 236 cggagggagta 246
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01062;MIR812;AAAA02017130.1/7803-7973 39946:Oryza sativa Indica
Group
Length = 171
Score = 153 bits (77), Expect = 1e-36
Identities = 136/156 (87%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 59 tttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttg 117
||||||||||||||||||| |||||||| ||||||||||| ||| |||| || ||||||
Sbjct: 155 tttgaccattcgtcttattaaaaaaatt-aagtaattattaattatttttctatcatttg 97
Query: 118 attcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntt 177
||||||||||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct: 96 attcattgttaaatatactttcatgtatacatatagttttacatatttcataattttttt 37
Query: 178 taataagacgaacggttaaacatgtgctaaaaagtc 213
|||||||||||||||| |||||| ||||||||||||
Sbjct: 36 taataagacgaacggtcaaacatatgctaaaaagtc 1
>RF01058;MIR806;AL662977.3/157932-158171 39947:Oryza sativa Japonica
Group
Length = 240
Score = 153 bits (77), Expect = 1e-36
Identities = 138/153 (90%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| ||| |||||||||||||||| || || |||||||||||
Sbjct: 1 atactccctccgtttctaaatattt-acaccgttgacttttttaa-acatgtttgaccat 58
Query: 68 tcgtcttattcaaaaaat-ttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||| ||
Sbjct: 59 tcgtcttattcaaaaaaaattaagtaattattaattcttttcctatcatttgattcagtg 118
Query: 126 ttaaatatactttcatgtacacatatagtttta 158
||||||||||||||||||| | |||||||||||
Sbjct: 119 ttaaatatactttcatgtatatatatagtttta 151
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| |||||||| |||||||||||||||| ||| |||| ||||||
Sbjct: 68 aataagacgaatggtcaaacatgtttaaaaaagtcaacggtgt-aaatatttagaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 153 bits (77), Expect = 1e-36
Identities = 180/212 (84%), Gaps = 4/212 (1%)
Strand = Plus / Plus
Query: 38 cgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaat-ttaagtaatta 96
||||||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 31 cgttgactttttaaa-atatgtttgaccattcgccttattaaaaaaaaattaagtaatta 89
Query: 97 tttattcttttcata-catttgattcattgttaaatatactttcatgtacacatatagtt 155
|| ||| |||| || ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 90 ttaattatttttctatcatttgattcattgttaaatatagtttcatgtatacatatagtt 149
Query: 156 ttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtca 214
|||| |||||| ||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 150 ttacatatttcacaaaattttttaaataaaacgaacggtcaagcatgtgctaaaaagtca 209
Query: 215 acggtgtcaaacattttaaaacggagggagta 246
||| |||||||||||| |||||||| |||||
Sbjct: 210 acgatgtcaaacatttagaaacggagagagta 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||||||||||||| |||||||||||| |||||||||||| | || || |||||| ||
Sbjct: 241 tactctctccgtttctaaatgtttgacatcgttgacttttt-agcacatgcttgaccgtt 183
Query: 69 cgtcttattcaaaaaattt 87
||| ||||| |||||||||
Sbjct: 182 cgttttatttaaaaaattt 164
>RF01058;MIR806;AACV01015692.1/289-51 39947:Oryza sativa Japonica
Group
Length = 239
Score = 153 bits (77), Expect = 1e-36
Identities = 124/137 (90%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 31 ttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaag 90
||||| ||||||||||||| || || ||||||||| || || ||||||||||||||||||
Sbjct: 24 ttgacgccgttgacttttttaa-acatgtttgaccgtttgtattattcaaaaaatttaag 82
Query: 91 taattatttattcttttcata-catttgattcattgttaaatatactttcatgtacacat 149
|||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 83 taattattaattcttttcctatcatttgattcattgttaaatatacttatatgtacacat 142
Query: 150 atagttttacgtatttc 166
|||||||||| ||||||
Sbjct: 143 atagttttacatatttc 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||| | ||||| ||||| || || |||||| ||||||||||||||||||||
Sbjct: 224 aaatgtttgacgctgttgatttttttaa-acatgtttgtccattcgtcttattcaaaaa 167
>RF01062;MIR812;AAAA02017090.1/7592-7425 39946:Oryza sativa Indica
Group
Length = 168
Score = 151 bits (76), Expect = 6e-36
Identities = 113/123 (91%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 167 tttttaaata--tgtttgaccattcgtcttattcaaaaaatttaagtaattattaattct 110
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|||| || |||||||||||||||||||||||||| | ||| |||||||||||||| |||
Sbjct: 109 tttcttattatttgattcattgttaaatatacttttaggtatacatatagttttacatat 50
Query: 164 ttc 166
|||
Sbjct: 49 ttc 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaa 83
||||||||||||||||||||| |||||
Sbjct: 13 tgtttgaccattcgtcttatttaaaaa 39
>RF01058;MIR806;AAAA02021700.1/37305-37064 39946:Oryza sativa Indica
Group
Length = 242
Score = 151 bits (76), Expect = 6e-36
Identities = 141/159 (88%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccat 67
||||| |||| |||| |||| |||||| ||||||||||||| ||||| |||||||||||
Sbjct: 2 tactccctccatttctaaatatttgacgccgttgacttttttaaata--tgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
| |||||||| ||| |||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 60 ttgtcttattgaaacaatttaagtaattattaatttttttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtattt 165
|||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 120 taaatatatttttatgtagacatatagttttacatattt 158
>RF01058;MIR806;AC092389.4/56062-56303 39947:Oryza sativa Japonica
Group
Length = 242
Score = 151 bits (76), Expect = 6e-36
Identities = 197/235 (83%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| || ||| |||||| ||||||||| | ||||||||| |
Sbjct: 1 atactccctccgtttctaaatattcgacgccgttgtctttttaaa-atatgtttgaccgt 59
Query: 68 tcgtcttattcaa-aaaatttaagtaattatttattcttttcata-catttgattcattg 125
||||||||||||| ||||||||| |||||||| ||| ||||| || ||||||||| ||||
Sbjct: 60 tcgtcttattcaacaaaatttaactaattattaatttttttcctatcatttgatttattg 119
Query: 126 ttaaatatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataag 184
|||||||||||| ||||| |||||||||||||| |||||| || ||||||
Sbjct: 120 ttaaatatacttatatgtatacatatagttttacatatttcaaaaaaaaaattgaataag 179
Query: 185 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
|| | |||| ||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 180 acaagcggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacgga 234
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| |||||| | ||||||| |||||| ||| || |||| ||||||
Sbjct: 69 aataagacgaacggtcaaacatattttaaaaagacaacggcgtcgaatatttagaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttta 50
|||||||| |||| |||||||||||||||||||||
Sbjct: 234 tccgtttctaaatatttgacaccgttgacttttta 200
>RF01058;MIR806;AAAA02005767.1/54633-54396 39946:Oryza sativa Indica
Group
Length = 238
Score = 151 bits (76), Expect = 6e-36
Identities = 170/199 (85%), Gaps = 4/199 (2%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||| |||||| ||||||||||||| || || ||||||||| ||||||||||||||||||
Sbjct: 18 aaatatttgacgccgttgacttttttaa-acatgtttgaccgttcgtcttattcaaaaaa 76
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
||||||| |||||| ||| ||||| || || |||||||||||||||||||||||| || |
Sbjct: 77 tttaagtgattattaattattttcctatcacttgattcattgttaaatatacttttatat 136
Query: 144 acacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgt 202
| ||||||||||||| |||||| ||| |||||||||||||||||||||| |
Sbjct: 137 a-tcatatagttttacatatttcacaaaagtttttaaataagacgaacggttaaacatat 195
Query: 203 gctaaaaagtcaacggtgt 221
|||||||| ||||||||||
Sbjct: 196 gctaaaaaatcaacggtgt 214
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||||||||||| |||||||| ||||||||||||| |||||| ||||
Sbjct: 69 aataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaatattt 18
>RF01058;MIR806;AAAA02003135.1/3633-3395 39946:Oryza sativa Indica
Group
Length = 239
Score = 151 bits (76), Expect = 6e-36
Identities = 135/152 (88%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||| |||| |||||||||||| |||||||||| || ||||||| |||||||||||
Sbjct: 9 tccgtttctaaatatttgacaccgttaactttttaaa-acatgtttgatcattcgtctta 67
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
|| |||||| |||| ||| |||| |||||||||||| ||||||||| ||||||||||| |
Sbjct: 68 ttaaaaaaaattaaataaatattaattcttttcatatcatttgatttattgttaaataca 127
Query: 135 ctttcatgtacacatatagttttacgtatttc 166
||||||| || |||||||||||||| ||||||
Sbjct: 128 ctttcatttatacatatagttttacatatttc 159
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
|||||||||||||| | | |||||||| |||||||| |||||||||||| |||| |||
Sbjct: 72 tttaataagacgaatgatcaaacatgttttaaaaagttaacggtgtcaaatatttagaaa 13
Query: 236 cggagggagtat 247
|||| |||||||
Sbjct: 12 cggatggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||| |||| ||||||||| || ||| |||||||||||| | ||||||||||| ||||
Sbjct: 232 ctccatttctaaatgtttggcattgttaactttttaaata--tatttgaccattcatctt 175
Query: 75 attcaaaaaattta 88
||| ||||||||||
Sbjct: 174 attaaaaaaattta 161
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 151 bits (76), Expect = 6e-36
Identities = 175/207 (84%), Gaps = 3/207 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
||||||||||| ||||||||||||| || || ||||||||| ||||||||||| ||||||
Sbjct: 8 aaatgtttgacgccgttgacttttttaa-acatgtttgaccgttcgtcttatttaaaaaa 66
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
| |||||| ||||| ||||| || || ||||||||||||||||||||||||||| ||||
Sbjct: 67 tataagtagttattaattctatttctatcatttgattcattgttaaatatacttttatgt 126
Query: 144 acacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgt 202
| |||||||||||||| |||||| ||| ||||||||||| ||| ||||||||
Sbjct: 127 atacatatagttttacatatttcacaaaattttttgaataagacgaatggtcaaacatgt 186
Query: 203 gctaaaaagtcaacggtgtcaaacatt 229
||||||||||||| ||||||||||
Sbjct: 187 ttgaaaaagtcaacggcgtcaaacatt 213
Score = 83.8 bits (42), Expect = 1e-15
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 26 aatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaat 85
|||||||||| ||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 213 aatgtttgacgccgttgactttttcaa-acatgtttgaccattcgtcttattcaaaaaat 155
Query: 86 tt 87
||
Sbjct: 154 tt 153
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 59 aataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 8
>RF01058;MIR806;AP008213.1/24894769-24894520 39947:Oryza sativa
Japonica Group
Length = 250
Score = 151 bits (76), Expect = 6e-36
Identities = 184/218 (84%), Gaps = 5/218 (2%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtctt 74
|||||||| |||||||| || ||||||| |||||| ||| ||||||||||||||||||
Sbjct: 9 tccgtttcgaaatgtttaacgccgttgattttttatcata--tgtttgaccattcgtctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 67 atttaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatat 126
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnntt-taataagacgaacgg 192
| ||| ||||| ||||||| |||||| ||| || || ||||| ||||||||
Sbjct: 127 atttttatgtagacatataattttacatatctcataaaagttttaaaataaaacgaacgg 186
Query: 193 ttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||| |||||||||||||| || | ||||||||||||
Sbjct: 187 ttaaatatgtgctaaaaagttaatgatgtcaaacattt 224
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| |||||| || |||||| ||||||| || |||||||| ||||||
Sbjct: 69 aataagacgaatggtcaaacatatgataaaaaatcaacggcgttaaacatttcgaaacgg 10
Query: 239 a 239
|
Sbjct: 9 a 9
>RF01058;MIR806;AAAA02035060.1/27893-28107 39946:Oryza sativa Indica
Group
Length = 215
Score = 151 bits (76), Expect = 6e-36
Identities = 165/194 (85%), Gaps = 4/194 (2%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaa--tttaagtaattatttattcttttcata-ca 113
||||||||| ||||| |||||||||||| |||||||| || || ||||||||| || ||
Sbjct: 21 tgtttgaccgttcgttttattcaaaaaaaatttaagtattttttaattcttttcctatca 80
Query: 114 tttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnn 173
||||||||||||||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 81 tttgattcattgttaaatatacttttatgtatacatatagttttatgtatttcgtaaaat 140
Query: 174 nnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttta 232
||| ||||||||||||||| |||||| | |||||||||||| ||||||||||||||
Sbjct: 141 tttttgaataagacgaacggtcaaacatatttaaaaaagtcaacgctgtcaaacatttta 200
Query: 233 aaacggagggagta 246
| ||||||||||||
Sbjct: 201 agacggagggagta 214
Score = 81.8 bits (41), Expect = 4e-15
Identities = 72/80 (90%), Gaps = 3/80 (3%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccat 67
||||| |||||| | ||||||||||||| |||||||||||| ||||| ||||||||| |
Sbjct: 214 tactccctccgtcttaaaatgtttgacagcgttgacttttttaaata--tgtttgaccgt 157
Query: 68 tcgtcttattcaaaaaattt 87
||||||||||||||||||||
Sbjct: 156 tcgtcttattcaaaaaattt 137
>RF01058;MIR806;AC120307.3/45731-45972 39947:Oryza sativa Japonica
Group
Length = 242
Score = 151 bits (76), Expect = 6e-36
Identities = 195/235 (82%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||| | |||| ||||||||||||||||||||||| || | ||| ||| ||||||||
Sbjct: 8 ctccgttactaaatatttgacaccgttgactttttaaacacatatttaaccgttcgtctt 67
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
|||||||| |||||||||||||| |||||||| || |||| ||| ||||||||||||
Sbjct: 68 attcaaaacgtttaagtaattattaattctttttctattatttaatttattgttaaatat 127
Query: 134 actttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacgg 192
|||| ||||| ||| ||| |||||| ||||| ||| ||||||||||||||
Sbjct: 128 acttatatgtatacaaataattttacatattttataaaatcttttgaataagacgaacgg 187
Query: 193 ttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
| ||| ||||||||||||||||||| ||||||| |||| |||||||||||||||
Sbjct: 188 tcaaatatgtgctaaaaagtcaacgatgtcaaatatttagaaacggagggagtat 242
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttaaaacg 237
||||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||
Sbjct: 70 aataagacgaacggttaaatatgtgtttaaaaagtcaacggtgtcaaatatttagtaacg 11
Query: 238 gagggag 244
|||||||
Sbjct: 10 gagggag 4
Score = 63.9 bits (32), Expect = 1e-09
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| ||||||| ||||||||||||| || | ||||||| |
Sbjct: 242 atactccctccgtttctaaatatttgacatcgttgactttttagc-acatatttgaccgt 184
Query: 68 tcgtcttattcaaaaaattt 87
||||||||||||||| ||||
Sbjct: 183 tcgtcttattcaaaagattt 164
>RF01058;MIR806;AACV01019611.1/24924-25161 39947:Oryza sativa
Japonica Group
Length = 238
Score = 151 bits (76), Expect = 6e-36
Identities = 177/210 (84%), Gaps = 4/210 (1%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccattcgtctt 74
|||||||| |||| |||||| ||||| | ||||| ||||| ||||||| |||||| |||
Sbjct: 9 tccgtttctaaatatttgacgccgttaatttttttaaata--tgtttgaacattcgcctt 66
Query: 75 attcaaaaaatttaagtaattatttattcttttcatacatttgattcattgttaaatata 134
|||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 67 attcaaaaaatttaagtaattattaatttttttctatcatttgattcattgttaaatata 126
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnntttaataagacgaacggtt 194
||| || || |||||||||||||| |||||| || ||||||||||||||||
Sbjct: 127 cttatatatatacatatagttttacatatttcacaaataatttgaataagacgaacggtt 186
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaa 224
||||||||| |||||| |||||||| ||||
Sbjct: 187 aaacatgtg-taaaaaatcaacggtatcaa 215
>RF01058;MIR806;AP008207.1/4618665-4618903 39947:Oryza sativa
Japonica Group
Length = 239
Score = 151 bits (76), Expect = 6e-36
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatac-att 115
||||||| || |||||||||| ||||||| ||||||||||| |||| |||| ||| |||
Sbjct: 49 tgtttgatcactcgtcttattaaaaaaat--aagtaattattaattcctttcttaccatt 106
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 107 tgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaaaat 166
Query: 176 ttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaa 234
||| |||||||| || ||| ||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 167 tttgaataagacaaatggtcaaacatgtggtaaaaagtcaacagtgtcaaacatttagaa 226
Query: 235 acggagggag 244
||||||||||
Sbjct: 227 acggagggag 236
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| ||||||||||||| ||||||||||| | || |||||||||||| |||||
Sbjct: 232 ctccgtttctaaatgtttgacactgttgacttttt-accacatgtttgaccatttgtctt 174
Query: 75 attcaaaa 82
||||||||
Sbjct: 173 attcaaaa 166
>RF01062;MIR812;AAAA02020579.1/3699-3527 39946:Oryza sativa Indica
Group
Length = 173
Score = 149 bits (75), Expect = 2e-35
Identities = 103/111 (92%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 159 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 100
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttc 166
|||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 99 tgattcattgttaaatatacttatatgtatacatatagttttacatatttc 49
>RF01058;MIR806;ABRL01001933.1/9102-9329 65489:Oryza barthii
Length = 228
Score = 149 bits (75), Expect = 2e-35
Identities = 122/135 (90%), Gaps = 2/135 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
||||||||||| |||||||| ||||||| || ||||||||||||| ||||||||||||||
Sbjct: 18 aaatgtttgacgccgttgaccttttaaa-acatgtttgaccattcatcttattcaaaaaa 76
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| ||||||||| || ||||| |||||||||||||||| |||| ||||
Sbjct: 77 tttaagtaattattaattcttttcctaccatttaattcattgttaaatatgcttttatgt 136
Query: 144 acacatatagtttta 158
| |||||||| ||||
Sbjct: 137 atacatatagcttta 151
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
||||||| ||| ||| |||||||| ||||| |||||||| |||||||||||
Sbjct: 69 aataagatgaatggtcaaacatgttttaaaaggtcaacggcgtcaaacattt 18
>RF01058;MIR806;AP008218.1/5770872-5771111 39947:Oryza sativa
Japonica Group
Length = 240
Score = 149 bits (75), Expect = 2e-35
Identities = 202/242 (83%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||| | ||||||||||| |||||||| |||| || || |||||||||||
Sbjct: 1 atactccctccgtccctaaatgtttgacgccgttgacatttttaa-acatgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||||| ||||||||| ||| ||||| || |||||| ||||||||
Sbjct: 60 tcgtcttattcaaaaaatttatgtaattattaattattttcctatcatttgtttcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||| ||| ||||| | |||||||||||| |||||| ||| |||||||
Sbjct: 120 taaatata-ttttatgtatatatatagttttacatatttcacaaaaaaatttaaataaga 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||||||| |||||||| ||||||||||| | ||||||||||| | | |||||||||
Sbjct: 179 cgaacggtcaaacatgtataaaaaagtcaacagcgtcaaacatttaaggatggagggagt 238
Query: 246 at 247
||
Sbjct: 239 at 240
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||| ||| |||||||| |||| |||||||| ||||||||||| ||||
Sbjct: 69 aataagacgaatggtcaaacatgtttaaaaatgtcaacggcgtcaaacatttagggacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttatt 77
||||||||||| | ||||||||||| | ||| ||||||||| |||||||||||
Sbjct: 223 aaatgtttgacgctgttgactttttta-tacatgtttgaccgttcgtcttatt 172
>RF01058;MIR806;AC133860.5/76754-76494 39947:Oryza sativa Japonica
Group
Length = 261
Score = 149 bits (75), Expect = 2e-35
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 118 attcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnntt 177
|||||| ||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 132 attcatggttaaatatactttcatatacacatatagttttacatatttcataaatttttt 191
Query: 178 taataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacg 237
||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 192 gaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacg 251
Query: 238 gagggagtat 247
||||||||||
Sbjct: 252 gagggagtat 261
Score = 123 bits (62), Expect = 1e-27
Identities = 117/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Plus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
|||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 7 ctccgttttaaaatgtttgacaccgttgactttttag-tatgtgtttgactgttcgtc-- 63
Query: 75 attcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatat 133
|||||||||||||||||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 64 ----aaaaaatttaagtaattatttatttttttcatatcatttgattcatggttaaatat 119
Query: 134 actttcatgtaca 146
|||||||| ||||
Sbjct: 120 actttcatataca 132
Score = 113 bits (57), Expect = 1e-24
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 atactccctccgttttaaaatgtttgacaccgttgactttttagc-acgtgtttgaccat 203
Query: 68 tcgtcttattcaaaaaattta 88
|||||||||||||||||||||
Sbjct: 202 tcgtcttattcaaaaaattta 182
Score = 81.8 bits (41), Expect = 4e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 204 ctaaaaagtcaacggtgtcaaacattttaaaacggagggag 244
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctaaaaagtcaacggtgtcaaacattttaaaacggagggag 3
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 149 bits (75), Expect = 2e-35
Identities = 198/238 (83%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 11 ctctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcg 70
||||||||||||| |||| ||| |||| ||||||| ||| || | | ||||||| ||||
Sbjct: 4 ctctctccgtttctaaatatttaacacagttgactcttttaaaatatatttgaccgttcg 63
Query: 71 tcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaa 129
||||||| |||||||| ||||||||||| ||| ||||| || |||||||||||| |||||
Sbjct: 64 tcttattaaaaaaatt-aagtaattattaattattttcctatcatttgattcatggttaa 122
Query: 130 atatactttcatgtacacatatagttttacgtatttc-nnnnnnnnntttaataagacga 188
||||| || ||||| |||||||||||||| |||||| |||| |||||| |
Sbjct: 123 atatatttatatgtatacatatagttttacatatttcataaattttttttagtaagacaa 182
Query: 189 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
|| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 183 acagtcaaacatgtgctaaaaagtcaacggtgtcaaatatttggaaacggagggagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 240 tactccctccgtttccaaatatttgacaccgttgacttttta 199
>RF01058;MIR806;DQ280666.1/5879-6118 39947:Oryza sativa Japonica
Group
Length = 240
Score = 149 bits (75), Expect = 2e-35
Identities = 174/205 (84%), Gaps = 5/205 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||||||||||||||| |||||||| || ||||||| |||||
Sbjct: 39 tttttaaata--tgtttgaccattcgtcttattaaaaaaattaaa-taattataaattct 95
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|||| || |||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 96 tttcctatcatttgattcattgttaaatatacttatatgtatacatatagttttacatat 155
Query: 164 ttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtc 222
||| ||| || |||||||||||| |||||||||||||||||| |||||||||
Sbjct: 156 ttcataaaattttttgaacaagacgaacggtcaaacatgtgctaaaaagttaacggtgtc 215
Query: 223 aaacattttaaaacggagggagtat 247
|| ||| |||||||||||||||
Sbjct: 216 gaatattcagaaacggagggagtat 240
Score = 56.0 bits (28), Expect = 2e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| ||| || ||||||||| |||||||| || ||||||||| |
Sbjct: 240 atactccctccgtttctgaatattcgacaccgttaactttttagc-acatgtttgaccgt 182
Query: 68 tcgtcttattcaaaaaattt 87
||||||| ||||||||||||
Sbjct: 181 tcgtcttgttcaaaaaattt 162
>RF01058;MIR806;AP008218.1/24274484-24274243 39947:Oryza sativa
Japonica Group
Length = 242
Score = 149 bits (75), Expect = 2e-35
Identities = 188/226 (83%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctta 75
|||||||| |||| |||||||| |||||||||| | ||||||||| ||||| |||
Sbjct: 9 tccgtttctaaatatttgacactattgactttttttaattttgtttgaccgttcgtatta 68
Query: 76 ttcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatata 134
||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 69 ttcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatata 128
Query: 135 ctttcatgtacacatatagttttacgtatttcnnnnnnnnntt-taataagacgaacggt 193
||| ||||| ||||||||||||| |||||| || ||||||| ||| |||
Sbjct: 129 cttatatgtatacatatagttttagatatttcacaaaagttttcgaataagaggaatggt 188
Query: 194 taaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 239
||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 189 caaacatgtgctaaaaagtcaacggtatcaaatatttagaaacgga 234
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
|||||| |||||||| |||| ||||| |||||||||||||| | || ||||||||||||
Sbjct: 241 tactctatccgtttctaaatatttgataccgttgacttttt-agcacatgtttgaccatt 183
Query: 69 cgtcttattcaaaaa 83
| |||||||| ||||
Sbjct: 182 cctcttattcgaaaa 168
>RF01058;MIR806;AC136525.2/10815-11055 39947:Oryza sativa Japonica
Group
Length = 241
Score = 149 bits (75), Expect = 2e-35
Identities = 171/201 (85%), Gaps = 5/201 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||| | |||||||||||| ||||||||||||||||||| |||||
Sbjct: 40 tttttaaata--tgtttgatcgttcgtcttattctaaaaatttaagtaattattaattct 97
Query: 105 tttcata-catttgattcattgttaaatatactttcatgtacacatatagttttacgtat 163
|||| || |||||||||||| ||||||||||| | ||||| |||||||||||||| |||
Sbjct: 98 tttcctatcatttgattcatcgttaaatatacgtatatgtatacatatagttttacatat 157
Query: 164 ttcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtc 222
||| ||| |||||||| |||||| ||| ||||||||||||||||||||| ||
Sbjct: 158 ttcacaaaagtttttgaataagac-aacggtcaaatatgtgctaaaaagtcaacggtatc 216
Query: 223 aaacattttaaaacggaggga 243
||| ||||||||| |||||||
Sbjct: 217 aaatattttaaaagggaggga 237
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 149 bits (75), Expect = 2e-35
Identities = 202/242 (83%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| || || ||||||||||||| || || ||||||||| |
Sbjct: 1 atactccctccgtttctaaatattcgatgccgttgacttttttaa-acatgtttgaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||||||||| ||||| ||| |||| ||| ||||| || |||||||||||||||
Sbjct: 60 tcgtcttattcaaaaattttaaataagtatt-atttttttcctatcatttgattcattgt 118
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||||||| ||||| ||||||||||||| |||||| ||| |||||||
Sbjct: 119 taaatatacttttatgtatacatatagttttatatatttcacaaaaatttttgaataaga 178
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
||| ||| |||||||||||||||||| |||||||| ||| |||| ||||||||| |||
Sbjct: 179 tgaatggtcaaacatgtgctaaaaagttaacggtgtaaaatatttagaaacggaggaagt 238
Query: 246 at 247
||
Sbjct: 239 at 240
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| |||||||| ||||||||||||| || || |||| ||||||
Sbjct: 69 aataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcgaatatttagaaacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| ||| |||||||| |||||||| || ||||||||||||| ||||
Sbjct: 233 ctccgtttctaaatattttacaccgttaactttttagc-acatgtttgaccattcatctt 175
Query: 75 attcaaaaa 83
|||||||||
Sbjct: 174 attcaaaaa 166
>RF01062;MIR812;AAAA02030915.1/32188-32358 39946:Oryza sativa Indica
Group
Length = 171
Score = 147 bits (74), Expect = 9e-35
Identities = 134/157 (85%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatacattt 116
||||| ||| |||||||||||||| |||||||| |||||||| ||||||||| |||||||
Sbjct: 157 tgtttaaccgttcgtcttattcaataaatttaaataattattaattcttttcctacattt 98
Query: 117 gattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnt 176
|||| ||||||||||||| ||| ||| | |||||||||||||| ||||| |
Sbjct: 97 gatttattgttaaatatatttttatgcatacatatagttttacatattttataaaagttt 38
Query: 177 ttaataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||||||||| |||||||||||||||||||
Sbjct: 37 ttaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtc 213
||||||||||||||||||||||||||||| |||||
Sbjct: 137 aataagacgaacggttaaacatgtgctaacaagtc 171
>RF01062;MIR812;AACV01000759.1/1650-1823 39947:Oryza sativa Japonica
Group
Length = 174
Score = 147 bits (74), Expect = 9e-35
Identities = 138/160 (86%), Gaps = 3/160 (1%)
Strand = Plus / Minus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||||||| || ||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 160 tgtttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 101
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
||||||||||||||||||| ||| ||||| |||||| |||||| ||||||
Sbjct: 100 tgattcattgttaaatatatttttatgtaggcatataattttacatatttcacaaaattt 41
Query: 176 ttt--aataagacgaacggttaaacatgtgctaaaaagtc 213
||| |||||||||||||||||||||||||||||||||||
Sbjct: 40 ttttgaataagacgaacggttaaacatgtgctaaaaagtc 1
>RF01058;MIR806;AP003683.3/85964-85726 39947:Oryza sativa Japonica
Group
Length = 239
Score = 147 bits (74), Expect = 9e-35
Identities = 197/235 (83%), Gaps = 7/235 (2%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttt-aaatacgtgtttgaccat 67
||||||||| |||| |||| |||||| ||||||||||||| ||||| |||||||||||
Sbjct: 2 tactctctcggtttgtaaatatttgacgccgttgacttttttaaata--tgtttgaccat 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|| ||||||| |||||||||||||||||||| ||| | ||| || |||||||||||||||
Sbjct: 60 tcatcttattaaaaaaatttaagtaattattaattatattcctatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
||||||||||| || || ||||||||||||| |||||| ||| |||||||
Sbjct: 120 taaatatactt--atatatacatatagttttatatatttcacaaaagtttttgaataaga 177
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggag 240
|||| | ||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 178 cgaatgtgcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacggag 232
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| |||| |||||||||||||||||||| | || |||||| ||||||||||
Sbjct: 232 ctccgtttctaaatatttgacaccgttgacttttt-agcacatgtttgcacattcgtctt 174
Query: 75 attcaaaaa 83
|||||||||
Sbjct: 173 attcaaaaa 165
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 147 bits (74), Expect = 9e-35
Identities = 163/193 (84%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||||||||||||| |||||||||| || |||||||||||| ||| |||| ||| ||||
Sbjct: 47 tgtttgaccattcgttttattcaaaatatctaagtaattattaattatttttatatcatt 106
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
||||||||| |||||||||||| ||||| ||||||||||||| |||||
Sbjct: 107 tgattcatttttaaatatacttatatgtatgcatatagttttacatattttataaaagtt 166
Query: 176 t-ttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaa 234
| | ||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||
Sbjct: 167 tctgaataagacgaacggtcaaacatgtgccaaaaagtcaacggtgtcaaatatttagaa 226
Query: 235 acggagggagtat 247
|||||||||||||
Sbjct: 227 acggagggagtat 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| |||| |||||||||||||||||||| || ||||||||| |
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgacttttt-ggcacatgtttgaccgt 181
Query: 68 tcgtcttattca 79
||||||||||||
Sbjct: 180 tcgtcttattca 169
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 200/241 (82%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| | ||||||| ||||||||||| |||| ||||||| | || ||||||| |
Sbjct: 1 atactccccccgtttctaaatgtttgacgtcgttaacttttttta-acatgtttgattgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
|||||||||| |||| ||||||||||||||| |||| ||||||| |||||||||||||||
Sbjct: 60 tcgtcttattaaaaacatttaagtaattattaattcctttcatatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||| ||| ||||| || ||||||||||| ||||| ||| |||||||
Sbjct: 120 taaatatatttttatgtagacgtatagttttacatattttacaaaagtttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagt 245
|||| ||| |||||| |||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 180 cgaatggtcaaacatatgctaaaaagtcaacggtgtcaaatatttagaaacggatggagt 239
Query: 246 a 246
|
Sbjct: 240 a 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/69 (91%), Gaps = 3/69 (4%)
Strand = Plus / Minus
Query: 16 tccgtttcaaaatgtttgacaccgttgactttttaa-atacgtgtttgaccattcgtctt 74
|||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 233 tccgtttctaaatatttgacaccgttgactttttagcata--tgtttgaccattcgtctt 176
Query: 75 attcaaaaa 83
|||||||||
Sbjct: 175 attcaaaaa 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 176 tttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaa 235
||||||||||||||| | |||||||| ||||||| |||| ||||||||||| |||
Sbjct: 72 tttaataagacgaacaatcaaacatgttaaaaaaagttaacgacgtcaaacatttagaaa 13
Query: 236 cggagggagtat 247
||| ||||||||
Sbjct: 12 cggggggagtat 1
>RF01058;MIR806;AAAA02026173.1/5859-5619 39946:Oryza sativa Indica
Group
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 194/233 (83%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 17 ccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttat 76
||||||| |||| |||||||||||| | ||||| || || | ||||||||||||||||||
Sbjct: 10 ccgtttcgaaatatttgacaccgttaatttttttaa-acatatttgaccattcgtcttat 68
Query: 77 tcaaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatac 135
| |||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 69 ttaaaaaatttaagtaattattaattctttttctatcatttgattcattgttaaatatat 128
Query: 136 tttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggtt 194
||| ||||| |||||| ||||| ||||| ||| ||||||||||| |||
Sbjct: 129 ttttatgtaggcatataattttatatattttacaaaaaaatttaaataagacgaatggtc 188
Query: 195 aaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
||| |||| ||||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 189 aaatatgtactaaaaaatcaacagtgtcaaacatttcgaaacggagggagtat 241
Score = 67.9 bits (34), Expect = 7e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| ||||||||| ||||||||||||| ||||| ||||| | ||| | |||||||||
Sbjct: 241 atactccctccgtttcgaaatgtttgacactgttga-ttttttagtacatatttgaccat 183
Query: 68 tcgtcttatt 77
||||||||||
Sbjct: 182 tcgtcttatt 173
>RF01058;MIR806;CR855092.1/95501-95738 4530:Oryza sativa (rice)
Length = 238
Score = 147 bits (74), Expect = 9e-35
Identities = 121/134 (90%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 34 acaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaa 93
|||||||||||||||| || || ||||||| | ||||||||||||||| |||||||||||
Sbjct: 23 acaccgttgacttttttaa-acttgtttgatcgttcgtcttattcaaataatttaagtaa 81
Query: 94 ttatttattcttttcata-catttgattcattgttaaatatactttcatgtacacatata 152
||||| ||| ||||| || ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 82 ttattaattattttcttatcatttgattcattgttaaatatacttttatgtaaacatata 141
Query: 153 gttttacgtatttc 166
||||||| ||||||
Sbjct: 142 gttttacatatttc 155
>RF01058;MIR806;AACV01022462.1/1486-1246 39947:Oryza sativa Japonica
Group
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 200/241 (82%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 9 tactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 68
||||| |||| |||| |||| ||||| ||| |||||||||||| | ||||||||| ||
Sbjct: 2 tactccctccatttctaaatatttgatgccggtgactttttaaa-atatgtttgaccgtt 60
Query: 69 cgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgtt 127
||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 61 tctcttatttaaaaaatttaagtaattattgattcttttcctagcatttgattcattgtt 120
Query: 128 aaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataagac 186
||||||||| ||||| |||||||||||||| |||||| ||| ||||| |
Sbjct: 121 aaatatactcatatgtatacatatagttttacatatttcacaaaagtttttaaataaaat 180
Query: 187 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagta 246
||||||| ||||||||||||||||||||||||| | ||| |||| || |||||||||||
Sbjct: 181 gaacggtcaaacatgtgctaaaaagtcaacggtattaaatatttagaatcggagggagta 240
Query: 247 t 247
|
Sbjct: 241 t 241
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 161/189 (85%), Gaps = 3/189 (1%)
Strand = Plus / Plus
Query: 57 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catt 115
||||||||||||| || |||| |||||| |||||||||||| ||| ||||| || ||||
Sbjct: 48 tgtttgaccattcatcatattaaaaaaaactaagtaattattaattattttcctatcatt 107
Query: 116 tgattcattgttaaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnn 175
||||||||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 108 tgattcattgttaaatatactttcatgtatatatatagttttacatatttcacagaattt 167
Query: 176 ttt-aataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttaa 233
||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||| |
Sbjct: 168 tttgaataagataaacggtcaaacatgtgcttaaaaagtcaacggtgtcaaacatttaga 227
Query: 234 aacggaggg 242
|||||||||
Sbjct: 228 aacggaggg 236
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 15 ctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtctt 74
||||||||| ||||||||||||||||||||||||||| || ||||||||| || ||||
Sbjct: 234 ctccgtttctaaatgtttgacaccgttgactttttaagcacatgtttgaccgtttatctt 175
Query: 75 attcaaaaaatt 86
||||||||||||
Sbjct: 174 attcaaaaaatt 163
>RF01058;MIR806;AP005647.3/116663-116903 39947:Oryza sativa Japonica
Group
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 188/225 (83%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 8 atactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgaccat 67
|||||| |||||| | |||| ||||||||||||||||| || || | ||||||||| |
Sbjct: 1 atactccctccgtccctaaatatttgacaccgttgacttctttaag-catgtttgaccgt 59
Query: 68 tcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttgattcattgt 126
||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattattaattctttccctatcatttgattcattgt 119
Query: 127 taaatatactttcatgtacacatatagttttacgtatttcnnnnnnnnnttt-aataaga 185
|||||||| ||| ||||| ||||||||||||| |||||| ||| |||||||
Sbjct: 120 taaatatatttttatgtatacatatagttttatatatttcacaaatttttttgaataaga 179
Query: 186 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
| |||||| |||||||| ||||||||||||| |||||| ||||
Sbjct: 180 caaacggtgaaacatgttttaaaaagtcaacgacgtcaaatattt 224
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
||||||||||||||| ||||||| || ||||||||||||||||| |||| ||||
Sbjct: 69 aataagacgaacggtcaaacatgcttaaagaagtcaacggtgtcaaatatttagggacgg 10
Query: 239 agggagtat 247
|||||||||
Sbjct: 9 agggagtat 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||| |||||| ||||||||||||||| || ||||| ||| || |||||||||||||||
Sbjct: 224 aaatatttgacgtcgttgactttttaaa-acatgtttcaccgtttgtcttattcaaaaaa 166
>RF01058;MIR806;AP008213.1/29261550-29261791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 147 bits (74), Expect = 9e-35
Identities = 131/145 (90%), Gaps = 5/145 (3%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgacttttt-aaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 18 aaatgtttgacgccgttgacttttttaaata--tgtttgactattcgtcttattcaaaaa 75
Query: 84 a-tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcat 141
| |||||||||||||| ||||||||| || ||||||||||||||||||||||| ||| ||
Sbjct: 76 aatttaagtaattattaattcttttcctatcatttgattcattgttaaatataattttat 135
Query: 142 gtacacatatagttttacgtatttc 166
||| | |||||||||||| ||||||
Sbjct: 136 gtatatatatagttttacatatttc 160
>RF01058;MIR806;AAAA02019727.1/42626-42864 39946:Oryza sativa Indica
Group
Length = 239
Score = 145 bits (73), Expect = 3e-34
Identities = 123/137 (89%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
||||||||||||||||||||||||||||| | | ||||||| ||||||||||| |||||
Sbjct: 17 aaaatgtttgacaccgttgactttttaaaaat-tatttgaccgttcgtcttatttaaaaa 75
Query: 84 atttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatg 142
| ||||||||||||| ||||||||| || ||||||||| ||| ||||||||||||| |||
Sbjct: 76 aattaagtaattattaattcttttcctaccatttgatttattattaaatatacttttatg 135
Query: 143 tacacatatagttttac 159
|| ||||||||||||||
Sbjct: 136 tatacatatagttttac 152
Score = 77.8 bits (39), Expect = 7e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
|||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 224 aaatatttgacgtcgttgactttttaaa-acatgtttgaccattcgtcttattcaaaaaa 166
Query: 85 ttt 87
|||
Sbjct: 165 ttt 163
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttta 232
||||||||||||||| ||| | | ||||||||||||||||||||||||||||
Sbjct: 69 aataagacgaacggtcaaataatttttaaaaagtcaacggtgtcaaacatttta 16
>RF01058;MIR806;AAAA02021990.1/8223-7984 39946:Oryza sativa Indica
Group
Length = 240
Score = 145 bits (73), Expect = 3e-34
Identities = 175/208 (84%), Gaps = 3/208 (1%)
Strand = Plus / Plus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaa 84
||||||||||| ||||||||||||| || | ||||||||| ||| ||||||||||||
Sbjct: 17 aaatgtttgacgccgttgacttttttaac-catgtttgaccgttcaccttattcaaaaag 75
Query: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
|||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||
Sbjct: 76 tttaagtaattattaattcttttcatatcatttgatttattgttaaatatacttttatgt 135
Query: 144 acacatatagttttacgtatttcnnnnnnnnnttt-aataagacgaacggttaaacatgt 202
| ||||||||||||||||||| ||| ||||||||||||||| ||| ||||
Sbjct: 136 ttatatatagttttacgtatttcacaagagtttttgaataagacgaacggtcaaatatgt 195
Query: 203 gctaaaaagtcaacggtgtcaaacattt 230
||||||||||||| |||||| ||||
Sbjct: 196 ttaaaaaagtcaacggcgtcaaatattt 223
Score = 54.0 bits (27), Expect = 1e-06
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 25 aaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
|||| |||||| ||||||||||||| || || | ||||||| |||||||||||||||||
Sbjct: 223 aaatatttgacgccgttgacttttttaa-acatatttgaccgttcgtcttattcaaaaa 166
>RF01058;MIR806;AP003928.3/135608-135368 39947:Oryza sativa Japonica
Group
Length = 241
Score = 145 bits (73), Expect = 3e-34
Identities = 159/187 (85%), Gaps = 4/187 (2%)
Strand = Plus / Plus
Query: 45 tttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattct 104
|||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |
Sbjct: 41 tttttaaata--tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaatttt 98
Query: 105 tttcatacatttgattcattgttaaatatactttcatgtacacatatagttttacgtatt 164
|||| ||||||||| |||||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 99 tttctatcatttgatttattgttaaatatacttatatgtatacatatagttttacatatt 158
Query: 165 tcnnnnnnnnnttt-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 223
|| ||| |||||||||||| |||||| ||||| |||||| ||||||||||||
Sbjct: 159 tcataaaagtttttaaataagacgaacagttaaatatgtg-taaaaaatcaacggtgtca 217
Query: 224 aacattt 230
|| ||||
Sbjct: 218 aatattt 224
