miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 295 bits (149), Expect = 2e-79
Identities = 213/234 (91%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcat 75
||||||||||||||| ||||| ||||||||||||||||||||| |||||| | |||||||
Sbjct: 1 gtactccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcat 60
Query: 76 tcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgt 135
||||||||||||||||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgt 120
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||
Sbjct: 121 taaatatactttcatgtacatatatagttttacatattttataaattttttt-aataagt 179
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 233
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| ||||||||||||||||||||||||||||||||||||| || | ||||| | |||
Sbjct: 240 tactctctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 78 gtcttattcaaaaaattta 96
| |||||| ||||||||||
Sbjct: 180 gacttattaaaaaaattta 162
Score = 77.8 bits (39), Expect = 7e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||| ||| ||| || || |||||||||||||||||||| |
Sbjct: 80 aaattttttgaataagacgaatgatcatacacgtacttaaaaagtcaacggtgtcaaata 21
Query: 238 tttcgaaacggatggagta 256
||| ||||||| ||||||
Sbjct: 20 ttttaaaacggagggagta 2
>RF01058;MIR806;AP005878.2/90818-90583 39947:Oryza sativa Japonica
Group
Length = 236
Score = 280 bits (141), Expect = 1e-74
Identities = 206/227 (90%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 28 gtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattca 87
||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 12 gtttcaagatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattaa 71
Query: 88 aaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatacttt 147
||||||||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 72 aaaaatttaagaaattatttatttttt-catatcatttgatttattgttaaatatacttt 130
Query: 148 catgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaa 207
|||||||||||||||||||| |||||||| ||| |||||| ||||||||||| |||| ||
Sbjct: 131 catgtacacatatagttttatatatttcacaaattttttttaataagacgaacggtc-aa 189
Query: 208 catgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 190 catgtgctaaaaagtcaacggtgtcaaatattttgaaacggatggag 236
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaatttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 236 ctccatccgtttcaaaatatttgacaccgttgactttttag 196
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 278 bits (140), Expect = 4e-74
Identities = 203/224 (90%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
||||||||||||||||||| |||| |||||||||||||||| |||||||||||| ||||
Sbjct: 2 tactccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||||||||||||||||| |||||| ||| ||| ||||||
Sbjct: 62 cgtcttatttaaaaaatttaagtaattatttattcttttcatatcatttaattcattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 122 aaatatactttcatgtacacatatagttttacatatttcacaa--tttttttaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 223
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||||||||||||||||||||||||| || | ||||| |||| |||||||| ||||||
Sbjct: 224 aaaatgtttgacaccgttgactttttagcacatgtttgaccatttgtcttattaaaaaaa 165
Query: 93 tt 94
||
Sbjct: 164 tt 163
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||| ||||||||||||||||||| | || | |||||||||||||||| ||||
Sbjct: 80 aaattttttaaataagacgaatggtcaaatacgtacttaaaaagtcaacggtgccaaatg 21
Query: 238 tttcgaaacggatggagtat 257
||| |||||||| |||||||
Sbjct: 20 ttttgaaacggagggagtat 1
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 276 bits (139), Expect = 2e-73
Identities = 213/240 (88%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| ||||||||||||||||||||||||||| || | ||| | | |||
Sbjct: 2 tactccctccgttttgaaatgtttgacaccgttgactttttagcacatgtttaaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||| | | |||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||||||||| |||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 122 aatatattttcatgtaggcatataattttacatatttcacaaaaatttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtat 241
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 79 aaattttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
||| ||||||| |||||||
Sbjct: 19 ttcaaaacggagggagtat 1
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||||||||||||||||||| || | ||||| | |||
Sbjct: 240 tactccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 274 bits (138), Expect = 6e-73
Identities = 212/239 (88%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgtttactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaacaaattatttattattttcatattatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||||
Sbjct: 122 aatatactttcatgtacaaatatggttttacatatttcacaattttttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|||||| |||||||||||||||||| ||||||| ||||||| |||||||| ||||||
Sbjct: 182 aatggtgaaacatgtgctaaaaagtgaacggtgcataacattttgaaacggagggagta 240
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtaaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||||||||||||||||||| ||||||| ||||||||| || | ||| | ||||
Sbjct: 241 gtactccctccgtttcaaaatgttatgcaccgttcactttttagcacatgtttcaccatt 182
Query: 77 cgtcttattcaaaaaa 92
||||||||||||||||
Sbjct: 181 cgtcttattcaaaaaa 166
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 274 bits (138), Expect = 6e-73
Identities = 191/211 (90%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttaatacatgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 62 gtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattatta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 122 aatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagaca 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacgg 228
|| ||||||||||||| |||||||| |||||
Sbjct: 182 aacggtcaaacatgtgttaaaaagttaacgg 212
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 270 bits (136), Expect = 1e-71
Identities = 210/237 (88%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||| ||||||||||| || |||||||||||||||||| ||| |||||||
Sbjct: 2 tactctctccgttttaaaatgtttgatacagttgactttttagtacgtgtttaatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| |||||||||||||| ||||||||||||| || ||| |||||||||||||||
Sbjct: 62 gttttattcaaaaaattaaagtaattatttattcttttcacatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||| |
Sbjct: 122 aatatactttcatgtacacaaatagttttacatatttcacaaaaatttttaaataagatg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|| ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 182 aacggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggag 238
Score = 87.7 bits (44), Expect = 8e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||||||||||||||| |||||||||||||||||||||| || ||||||| | ||| |
Sbjct: 238 ctccctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccgttcat 179
Query: 80 cttattcaaaaa 91
|||||| |||||
Sbjct: 178 cttatttaaaaa 167
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||||||||| ||||||| | ||||| || ||||||||||||| || |||||||||
Sbjct: 78 aattttttgaataaaacgaatgattaaacacgtactaaaaagtcaactgtatcaaacatt 19
Query: 240 tcgaaacgga 249
| |||||||
Sbjct: 18 ttaaaacgga 9
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 270 bits (136), Expect = 1e-71
Identities = 211/237 (89%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
||||||| |||||||||||||||||| |||||||||||| || | ||||| | ||||||
Sbjct: 5 tccctccatttcaaaatgtttgacactattgactttttagcacatgtttgaccgttcgtc 64
Query: 81 ttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaat 140
|||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||
Sbjct: 65 ttattcaaaaaatttaagtaattatttattattttcatatcatttgattcattattaaat 124
Query: 141 atactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaat 200
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 atactttcatctacacatatagttttacatatttcataaaattttttgaataagacaaat 184
Query: 201 ggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|||||||||||| | ||||||||||||||||||||| |||| ||||| || ||||||
Sbjct: 185 ggtcaaacatgtacttaaaaagtcaacggtgtcaaatattttgaaacagagggagta 241
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 79 aaattttttgaataagacgaacggtcaaacatgtgctaaaaagtcaatagtgtcaaacat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
Score = 93.7 bits (47), Expect = 1e-18
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||||||| |||||||||| |||||||||||||||||||| ||||| | ||||| ||||
Sbjct: 241 tactccctctgtttcaaaatatttgacaccgttgactttttaagtacatgtttgaccatt 182
Query: 77 cgtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 181 tgtcttattcaaaaaattt 163
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 268 bits (135), Expect = 4e-71
Identities = 198/220 (90%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 39 tttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattcaaaaaatttaa 97
|||||||||| ||| |||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct: 25 tttgacaccgatgattttttaagtacgtgtttgaccattcgtcttattcaaaaaatttaa 84
Query: 98 gtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacaca 157
|||||||||| |||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 85 ttaattatttattcttttcatatcatttgattcattgttaaatatactttcatgtacaca 144
Query: 158 tatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaa 217
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||
Sbjct: 145 tatagttttacatatttcataattttttttgaataagacgaacggtcaaacatgtgttaa 204
Query: 218 aaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 205 aaagtcaacggtgtcgaacattttgaaacggagggagtat 244
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||| |||||||||||||||||| || | ||||| | |||
Sbjct: 243 tactccctccgtttcaaaatgttcgacaccgttgactttttaacacatgtttgaccgttc 184
Query: 78 gtcttattcaaaaaa 92
|||||||||||||||
Sbjct: 183 gtcttattcaaaaaa 169
Score = 67.9 bits (34), Expect = 7e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaa 235
||||||||||||||||||||||||||||||| || | |||||| ||| ||||||||||
Sbjct: 82 aaattttttgaataagacgaatggtcaaacacgtacttaaaaaatcatcggtgtcaaa 25
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 262 bits (132), Expect = 2e-69
Identities = 207/233 (88%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgactttttagcacgtgtttgaccattcgtcttat 68
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
|||||||||||||||||||||||| ||| || | ||||| |||||||||||||
Sbjct: 69 tcaaaaaatttaagtaattatttattcttttcatctcatctgattcattgttaaatatat 128
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||||||||||||||||||||||||||||| || |||||| | ||||| ||||||||
Sbjct: 129 tttcatgtacacatatagttttacatatttcacaat-ttttttaactaagatgaatggtc 187
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|||||| ||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 188 aaacatatgctaaaaagtcaacggcgtcaaacattttgaaacggagggagtat 240
Score = 117 bits (59), Expect = 8e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacgccgttgactttttag 197
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 260 bits (131), Expect = 9e-69
Identities = 205/232 (88%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| ||||||||| ||||| || ||||| ||||||||| || ||||| |||||
Sbjct: 2 tactccctccatttcaaaatatttgaaactgttgattttttagtatgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||||||||||||||||||| |||||| ||||||| ||| |||
Sbjct: 62 gtcttatttaaaaaatttaagtaattatttgttcttttcatatcatttgattcattatta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 122 aatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 182 aacggtcaaatatgtgctaaaaagtcaacagtgtcaaacattttgaaacgga 233
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
|||||||||||||||||||||||||| ||||||||||||| || ||||||| | ||||||
Sbjct: 237 tccctccgtttcaaaatgtttgacactgttgactttttagcacatatttgaccgttcgtc 178
Query: 81 ttattcaaaaaattt 95
|||||||||||||||
Sbjct: 177 ttattcaaaaaattt 163
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||||||||| | ||||||| ||||| || ||||| ||
Sbjct: 79 aaattttttaaataagacgaatggtcaaacacatactaaaaaatcaacagtttcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||| ||| |||||||
Sbjct: 19 tttgaaatggagggagtat 1
>RF01058;MIR806;AP008217.1/20608272-20608042 39947:Oryza sativa
Japonica Group
Length = 231
Score = 258 bits (130), Expect = 4e-68
Identities = 193/215 (89%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 ccgttttaaaatatttgacaccgttgactttttagtacgtgtttgaccattcgtcttatt 60
Query: 86 caaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
|||||||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 61 aaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatact 120
Query: 146 ttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtca 205
|||||||| ||||||| |||||||||||| || || |||||| |||||||||||||||||
Sbjct: 121 ttcatgtatacatataattttacatattttat-aattttttttaataagacgaatggtca 179
Query: 206 aacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||| |||||| |||||||||||||||||||
Sbjct: 180 aacatgtgttaaaaattcaacggtgtcaaacattt 214
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| ||
Sbjct: 70 aaatttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaatat 11
Query: 239 tt 240
||
Sbjct: 10 tt 9
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||||||||||||||||| |||||| || | ||||| ||||||||||||| ||||||
Sbjct: 215 aaaatgtttgacaccgttgaatttttaacacatgtttgaccattcgtcttattaaaaaaa 156
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 258 bits (130), Expect = 4e-68
Identities = 208/234 (88%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| |||||||||||||||||||||||||||||| |||||||| |||||| | ||||
Sbjct: 1 gtactcactccgtttcaaaatgtttgacaccgttgacattttagtatgtatttaaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
| ||||| |||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 tattttattaaaaaaatttaagtaattatttattcttttcatata-tttgattcattgtt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||
Sbjct: 120 aaatatactttcatgtacacatgtagttttacatatttcacaaatttttt--aataagat 177
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggat 250
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 178 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggat 231
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
|||||||||||||||||||||||||||||||||||| || | ||||| ||||| ||||||
Sbjct: 230 tccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccattcatcttat 171
Query: 85 tcaaaaa 91
| |||||
Sbjct: 170 taaaaaa 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||| |||||||||||||||||||| ||||||||
Sbjct: 44 ctaaaatgtcaacggtgtcaaacattttgaaacgga 9
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa Indica
Group
Length = 238
Score = 256 bits (129), Expect = 1e-67
Identities = 199/224 (88%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||| || |||||||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 1 gtactccatcagtttcaaaatgtttgacatcgttgactttttagtacgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 cgttttattcaaaaaatttaagtaattatttattccttttatatcatttgattcattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttatatatttc---acatttttttaataagac 177
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 178 gaatggtcaaacatgtgttaaaaagtgaacggtgtgaaacattt 221
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||| ||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 79 aaattttttgaataaaacgaatggtcaaacacgtactaaaaagtcaacgatgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| ||||| |||||||||
Sbjct: 19 tttgaaactgatggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 28 gtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattca 87
|||| ||||||||| |||||||| |||||||| || | ||||| ||||||||||||| |
Sbjct: 227 gttttaaaatgtttcacaccgttcactttttaacacatgtttgaccattcgtcttattaa 168
Query: 88 aaaaat 93
||||||
Sbjct: 167 aaaaat 162
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 256 bits (129), Expect = 1e-67
Identities = 212/241 (87%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||||| |||||| |||||||||| || |
Sbjct: 62 gtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttatagtaa 121
Query: 138 aatatactttcatgtacacatatagttttacatatttca--taaaattttttgaataaga 195
||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 122 aatatactttcatatacacatatagttttacatatttcaacaaaaaaaatttgaataaga 181
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
||| ||| |||||| ||||||||||||| ||||||||||||| ||||| |||||||
Sbjct: 182 tgaacggtaaaacatacactaaaaagtcaacagtgtcaaacattttaaaacgaatggagt 241
Query: 256 a 256
|
Sbjct: 242 a 242
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagt 61
|||||| | ||||| |||||||||||||| ||||||||||||||
Sbjct: 242 tactccattcgttttaaaatgtttgacactgttgactttttagt 199
>RF01058;MIR806;AAAA02007628.1/21696-21454 39946:Oryza sativa Indica
Group
Length = 243
Score = 254 bits (128), Expect = 6e-67
Identities = 200/224 (89%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||| ||| |||| |||||| |||||||| |||||
Sbjct: 2 tactccctccgtttcaaaatatttgacactgttaacttgttagtatgtatttgaccattc 61
Query: 78 gtcttattcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||||||||| |||||||||||||||| |||||| ||||||||||||||
Sbjct: 62 gtcttattcaaaaaaatttaagtaattatttatacttctcatatcatttgatttattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||
Sbjct: 122 aaatatactttcatatacacatatagttttacatatttcat--attttttttaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||| |||||||||| || |||||| |||||||||||||||||||
Sbjct: 180 gaacggtcaaacatatgttaaaaaatcaacggtgtcaaacattt 223
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||||||||||||||||||||||| | | |||| |||| ||| ||||||||
Sbjct: 81 taaatttttttgaataagacgaatggtcaaatacatactaacaagttaacagtgtcaaat 22
Query: 237 atttcgaaacggatggagtat 257
|||| |||||||| |||||||
Sbjct: 21 attttgaaacggagggagtat 1
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||||||||||||||||| |||||| | | ||||| | ||||||||||| ||||||
Sbjct: 224 aaaatgtttgacaccgttgattttttaacatatgtttgaccgttcgtcttattaaaaaaa 165
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 252 bits (127), Expect = 2e-66
Identities = 189/211 (89%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 39 tttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaag 98
||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||
Sbjct: 23 tttgacaccgttgactttttaatacgtgtttgaccattcgtcttatttaaaaaatttaaa 82
Query: 99 taattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacacat 158
|||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 83 taattatttatcctcttcatatcatttgattcattgttaaatatactttcatgtacacat 142
Query: 159 atagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaa 218
||||||||||||||||| | |||||||| ||||||| || ||||||||||||||||||
Sbjct: 143 atagttttacatatttc--acaatttttttaataagatgagcggtcaaacatgtgctaaa 200
Query: 219 aagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||||||||||||||| ||||||||
Sbjct: 201 aagtcaacggtgtcaaacattttgaaacgga 231
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||||||| ||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 79 aaattttttaaataagacgaatggtcaaacacgtattaaaaagtcaacggtgtcaaa 23
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
|||||||||||||||||||||||||||||||||||||| || | ||||| | || ||||
Sbjct: 233 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgctcatctt 174
Query: 83 attcaaaaaatt 94
||| ||||||||
Sbjct: 173 attaaaaaaatt 162
>RF01058;MIR806;AAAA02025675.1/1048-809 39946:Oryza sativa Indica
Group
Length = 240
Score = 252 bits (127), Expect = 2e-66
Identities = 211/240 (87%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
|||||||||||| ||||||||||||||||||| | |||| || |||| || |||
Sbjct: 61 cgtcttattcaagaaatttaagtaattatttattcttatcgtatcattagattcatggtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||||||||||||||| | ||||||| || |||||| | |||||||
Sbjct: 121 aaatatactttcatgtacacatatagtgtaacatattcca-caaatttgtgtcataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||| ||||||| || ||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 180 gaatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 240 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacatt 181
Query: 77 cgtcttat 84
||||||||
Sbjct: 180 cgtcttat 173
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||| |||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaatttcttgaataagacgaatgttcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| |||||||| ||||||
Sbjct: 19 tttgaaacggagggagta 2
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 252 bits (127), Expect = 2e-66
Identities = 205/232 (88%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttaactttttaatacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| ||||||||| ||||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gttttattcaaatcatttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 122 aatatattttcatgtacacatatagttttacatatttca-caatttttttgaataagatg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| ||||||| |||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 181 aacggtcaaatatgtgctaaaaaatcaacggtgtcgaacattttaaaacgga 232
Score = 87.7 bits (44), Expect = 8e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 185 tttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaa 244
||||||||| ||||||||||||||| || |||||||| ||||||||||||||||| |||
Sbjct: 73 tttgaataaaacgaatggtcaaacacgtattaaaaagttaacggtgtcaaacattttgaa 14
Query: 245 acggatggagta 256
||||| ||||||
Sbjct: 13 acggagggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||| ||||||||| |||||||| ||||||||||| ||||||| || ||||||| | ||
Sbjct: 240 gtacttcctccgttttaaaatgttcgacaccgttgattttttagcacatatttgaccgtt 181
Query: 77 cgtcttattcaaaaaa 92
| ||||||||||||||
Sbjct: 180 catcttattcaaaaaa 165
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 252 bits (127), Expect = 2e-66
Identities = 212/240 (88%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttattacgtgtttgactattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||| ||||||||||||| |||| ||| |||||||||||
Sbjct: 62 gtcttattaaaaaaatt-aagtaattatttattcttttcatacaatttaatttattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 121 aatatactttcatgtacacatataattttacatatttca-caaattttttgaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||| |||| ||||||||| |||||||| ||| |||| |||||||||||||||
Sbjct: 180 aacggtcaaatatgtactaaaaagttaacggtgttaaatattttaaaacggatggagtat 239
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 78 aatttttttaataagacgaatagtcaaacacgtaataaaaagtcaacggtgtcaaacatt 19
Query: 240 tcgaaacggatggagtat 257
| |||||||| |||||||
Sbjct: 18 ttgaaacggagggagtat 1
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||||||| ||||| ||| |||||||| |||||||||||| ||||||| | |||
Sbjct: 238 tactccatccgttttaaaatatttaacaccgttaactttttagtacatatttgaccgttc 179
Query: 78 gtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 178 gtcttattcaaaaaattt 161
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 250 bits (126), Expect = 9e-66
Identities = 210/239 (87%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||| ||||| |||||| || || ||||| |||||
Sbjct: 2 tactccctccgtttctaaatgtttgacgccgttaacttttaagcgcgggtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||||||||| |||||||| | |||||| ||||||| |||||||
Sbjct: 62 gtcttatttaaaaaatttaactaattattgatgactttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcat-aaatttttttaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| |||||||||||||||||||||| || |||||||||||||| ||||||| ||||||
Sbjct: 181 aacggtcaaacatgtgctaaaaagttaatggtgtcaaacattttaaaacggagggagta 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||||||||||||||| | ||| |||||| ||||| |||||||||
Sbjct: 79 aaattttttaaataagacgaatggtcaaacccgcgcttaaaagttaacggcgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 ttagaaacggagggagtat 1
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| ||||||||||||||| || ||||||||| || | ||||| | |||
Sbjct: 239 tactccctccgttttaaaatgtttgacaccattaactttttagcacatgtttgaccgttc 180
Query: 78 gtcttattcaaaaaattta 96
|||||||| ||||||||||
Sbjct: 179 gtcttattaaaaaaattta 161
>RF01058;MIR806;AP008211.1/2299532-2299770 39947:Oryza sativa
Japonica Group
Length = 239
Score = 250 bits (126), Expect = 9e-66
Identities = 199/226 (88%), Gaps = 6/226 (2%)
Strand = Plus / Plus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||| ||||||||||| ||| ||||||||||||||| |||| |||||||| |||||||
Sbjct: 8 ctcccttcgtttcaaaatattttacaccgttgacttttcagtatgtatttgaccattcgt 67
Query: 80 cttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaa 139
||||||||||||| ||||||||| |||||| ||||||| |||||||||
Sbjct: 68 tttattcaaaaaat------aattatttattcttttcatatcatttgattcattgttaaa 121
Query: 140 tatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaa 199
||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 122 tatactttcatgtacacatatagttttacatatttcacaaattattttgaataagacgaa 181
Query: 200 tggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
|| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 182 tgatcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 227
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 235 tccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttgatcattcgtc 176
Query: 81 ttattcaaaa 90
||||||||||
Sbjct: 175 ttattcaaaa 166
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||| ||||||||||||| | | || ||||||||||||||| ||| ||||
Sbjct: 81 attttttgaataaaacgaatggtcaaatacatactgaaaagtcaacggtgtaaaatattt 22
Query: 241 cgaaacg 247
||||||
Sbjct: 21 tgaaacg 15
>RF01058;MIR806;AP008209.1/3514325-3514566 39947:Oryza sativa
Japonica Group
Length = 242
Score = 250 bits (126), Expect = 9e-66
Identities = 206/234 (88%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttaacaattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| || || |||||| ||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gttttttttaaaaaaattaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattt--tttgaataaga 195
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcataaaaaaaaatttgaataaga 181
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||||||||| ||||||| ||||| |||||||| |||| ||||||||
Sbjct: 182 cgaatggtcaaacatgttctaaaaaatcaacagtgtcaaatattttgaaacgga 235
Score = 87.7 bits (44), Expect = 8e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| || || |||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 76 ttttttaaaaaaaacgaattgttaaacacgtgctaaaaagtcaacggtgtcaaacatttt 17
Query: 242 gaaacggatggagtat 257
|||||||| |||||||
Sbjct: 16 gaaacggagggagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||||||||||||| |||||||| ||||| ||||||| || | ||||| ||||||||||
Sbjct: 237 cctccgtttcaaaatatttgacactgttgattttttagaacatgtttgaccattcgtctt 178
Query: 83 attcaaa 89
|||||||
Sbjct: 177 attcaaa 171
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 248 bits (125), Expect = 3e-65
Identities = 196/222 (88%)
Strand = Plus / Plus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||||||||||||||||||||| |||||||| ||||| ||||| || |||||||||||
Sbjct: 18 aaaatgtttgacaccgttgactttctagtacgtgtttgaccattcatcctattcaaaaaa 77
Query: 93 tttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgt 152
||||| ||| |||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct: 78 tttaaataactatttattattttcatatcatttgattcattgttaaatatactttcatgt 137
Query: 153 acacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgt 212
|||||||||||||||||||||||| ||| |||| ||||||||||||| ||| ||||||||
Sbjct: 138 acacatatagttttacatatttcacaaacttttatgaataagacgaacggttaaacatgt 197
Query: 213 gctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
| ||||||||||||||||| |||||||| |||| ||| ||||
Sbjct: 198 gttaaaaagtcaacggtgttaaacattttgaaatggagggag 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||| || ||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 80 aaattttttgaataggatgaatggtcaaacacgtactagaaagtcaacggtgtcaaacat 21
Query: 239 tt 240
||
Sbjct: 20 tt 19
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||||| ||||||||||||| ||||||||||||||||| || | ||| | | |||||
Sbjct: 239 ctccctccatttcaaaatgtttaacaccgttgactttttaacacatgtttaaccgttcgt 180
Query: 80 cttattcaaaaaa 92
|||||||| ||||
Sbjct: 179 cttattcataaaa 167
>RF01058;MIR806;AAAA02007571.1/43599-43359 39946:Oryza sativa Indica
Group
Length = 241
Score = 246 bits (124), Expect = 1e-64
Identities = 201/229 (87%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||| |||||||||||| ||||| |||| | |||||||| ||||| ||| | ||||
Sbjct: 1 gtactcccaccgtttcaaaatatttgataccgataactttttaatacgtgtttaaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 61 catcttatttaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 121 aaatatactctcatgtacacatatagttttacatatttcacaaattgttttgaataagac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||| | |||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 181 gaacgatcaaacatatgttaaaaagtcaacggtgtcaaacattttgaaa 229
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgactttttaacatatgtttgatcgttcgtcttattcaa 170
Query: 89 aa 90
||
Sbjct: 169 aa 168
>RF01058;MIR806;AP008214.1/26299851-26300093 39947:Oryza sativa
Japonica Group
Length = 243
Score = 246 bits (124), Expect = 1e-64
Identities = 180/201 (89%)
Strand = Plus / Plus
Query: 49 ttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattattta 108
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 35 ttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattta 94
Query: 109 nnnnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttac 168
|||||| ||||||| |||||||||||||||| ||||| |||||||| |||||
Sbjct: 95 ttcttttcatatcatttgattcattgttaaatatacttctatgtatacatatagctttac 154
Query: 169 atatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacgg 228
||||||||||||||||||| |||||||| ||||||||||||| || ||||||||||||||
Sbjct: 155 atatttcataaaattttttaaataagacaaatggtcaaacatatgttaaaaagtcaacgg 214
Query: 229 tgtcaaacatttcgaaacgga 249
|||||||||||| |||||||
Sbjct: 215 tgtcaaacattttaaaacgga 235
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaa 225
||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 81 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaa 35
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||| ||||||||||||||||||||||||||| | | ||||| |||| ||||||
Sbjct: 236 ctccgttttaaaatgtttgacaccgttgactttttaacatatgtttgaccatttgtctta 177
Query: 84 ttcaaaaaattt 95
|| |||||||||
Sbjct: 176 tttaaaaaattt 165
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 246 bits (124), Expect = 1e-64
Identities = 205/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||| ||||| ||| || |||||||||||||||||| | ||||| ||||
Sbjct: 1 gtactccctccgttttaaaatatttaacgccgttgactttttagtacatgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| ||||||||||| |||||||||| ||||| ||||||||||| ||
Sbjct: 61 cgtcttattaaaaaaatttaactaattatttattctttttatatcatttgatttattatt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 121 aaatatactttcatttacacatatagttttacatatttca-caaatttttttaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||| |||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 180 gaattgtcaaacatgtgctaaaaggttaacggtgtcaaacattttaaaacgga 232
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||| ||
Sbjct: 79 aaatttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggcgttaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| ||||||| ||||||
Sbjct: 19 tttaaaacggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| ||||||||| |||||||||||||||||| || |||||| || | ||||| ||||
Sbjct: 239 tacttcctccgttttaaaatgtttgacaccgttaaccttttagcacatgtttgacaattc 180
Query: 78 gtcttattcaaaaaattt 95
|||||||| |||||||||
Sbjct: 179 gtcttattaaaaaaattt 162
>RF01058;MIR806;AAAA02006511.1/7100-6860 39946:Oryza sativa Indica
Group
Length = 241
Score = 244 bits (123), Expect = 5e-64
Identities = 176/195 (90%), Gaps = 2/195 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 2 tactcgctccgtttcaaaatgtttggcaccgttggctttttagtacgtgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||
Sbjct: 62 gtcttattcaaaaattttaagtaattatttattcttttcatatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttc--acaatttttttaataagacg 179
Query: 198 aatggtcaaacatgt 212
|| ||| ||||||||
Sbjct: 180 aacggttaaacatgt 194
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||| |
Sbjct: 75 tttttgaataagacgaatgatcaaacacgtactaaaaagccaacggtgccaaacattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AAAA02036553.1/4131-3892 39946:Oryza sativa Indica
Group
Length = 240
Score = 244 bits (123), Expect = 5e-64
Identities = 204/232 (87%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| |||||||||| ||||||| |||| ||||||| |||||| ||||| ||||
Sbjct: 2 tactccctctgtttcaaaatatttgacatcgttaactttttggtacgtgtttgaccattt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct: 62 atcttattcaaaaaatttaaataattatttattcttttcatatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 122 aatatactttcatatacacatgtagttttacatatttcaccaacttttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| |||||| ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 182 aacagtcaaagatgtgctaaaaagtcaacggtatcaaacattt-gaaacgga 232
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
||||||||||||||| ||||||| |||||||||||||||| || | ||||| ||||||
Sbjct: 236 tccctccgtttcaaa-tgtttgataccgttgactttttagcacatctttgactgttcgtc 178
Query: 81 ttattcaaaaaa 92
||||||||||||
Sbjct: 177 ttattcaaaaaa 166
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||| |||||||||||| || | ||||||| |||| ||||||| ||
Sbjct: 79 aaattttttgaataagataaatggtcaaacacgtaccaaaaagttaacgatgtcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| ||||| || |||||||
Sbjct: 19 tttgaaacagagggagtat 1
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 244 bits (123), Expect = 5e-64
Identities = 183/204 (89%), Gaps = 1/204 (0%)
Strand = Plus / Plus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 42 tttttagtgcgtgtttgaccattcgtcttattcaaaaaatttaagtcattatttattctt 101
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 102 ttcatatcatttgattcatttttaaatatactttcatgcacacatatagttttacatatt 161
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtca 233
||| |||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 162 tcacaaaatttttt-aataagacgaacggtcaaatatgtgctaaaaagttaacggtgtca 220
Query: 234 aacatttcgaaacggatggagtat 257
||||||| ||||||||||||||||
Sbjct: 221 aacattttgaaacggatggagtat 244
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||||||||||||||||||||| ||||||||| || ||||||| | |||
Sbjct: 243 tactccatccgtttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttc 184
Query: 78 gtcttattcaaaaa 91
|||||||| |||||
Sbjct: 183 gtcttattaaaaaa 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
|||||||||||||||||||||||||||||||
Sbjct: 83 aaattttttgaataagacgaatggtcaaaca 53
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||||||||||||
Sbjct: 37 ctaaaaagtcaacggtgtcaaacattt 11
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 244 bits (123), Expect = 5e-64
Identities = 192/216 (88%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 43 acaccgtt-gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaa 101
|||||||| ||||||||| ||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 29 acaccgttagactttttattacgtgtttgaccattcgtcttattaaaaaaatttaagtaa 88
Query: 102 ttatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacacatata 161
||||||| |||||| ||||||| ||||| ||||||| ||||||||||| |||||
Sbjct: 89 ttatttattcttttcatatcatttgattcattgtaaaatatattttcatgtacatatata 148
Query: 162 gttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaag 221
||||||||||||| | ||| | ||||||||||||| || |||||||||||||||||||||
Sbjct: 149 gttttacatattttacaaattattttgaataagacaaacggtcaaacatgtgctaaaaag 208
Query: 222 tcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||||||||||||| ||||||||||||||||
Sbjct: 209 tcaacggtgtcaaacattttgaaacggatggagtat 244
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||||||||||||||||||||||||||||||| || | ||||| | ||
Sbjct: 243 tactccatccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttt 184
Query: 78 gtcttattcaaaa 90
|||||||||||||
Sbjct: 183 gtcttattcaaaa 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc-aacggtgt 231
||||||||| ||||||||||||||||||||| || ||||||||| ||||||||
Sbjct: 82 aaatttttttaataagacgaatggtcaaacacgtaataaaaagtctaacggtgt 29
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 244 bits (123), Expect = 5e-64
Identities = 210/240 (87%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2 tactccatccatttcataatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||||| || ||||||||||| ||| |||
Sbjct: 62 gtcttatttaaaaaatttaagtaattatttattcttttcacatcgtttgattcattatta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||||||||||||| |||||||||||||||||| | | | |||||||||||| |
Sbjct: 122 aatatattttcatgtacacacatagttttacatatttcacagattcttttgaataagatg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||| |||||||||||||||||||||| |||||||||||| || ||||| |||||||
Sbjct: 182 aacggttaaacatgtgctaaaaagtcaacaatgtcaaacattt-gatacggagggagtat 240
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaattttttaaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
| |||| ||||||||||
Sbjct: 19 tatgaaatggatggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||| ||||| ||||||||| ||||||||||||| || | ||| | | |||
Sbjct: 239 tactccctccgtatcaaa-tgtttgacattgttgactttttagcacatgtttaaccgttc 181
Query: 78 gtcttattcaaaa 90
||||||||||||
Sbjct: 180 atcttattcaaaa 168
>RF01058;MIR806;AP008209.1/34522251-34522486 39947:Oryza sativa
Japonica Group
Length = 236
Score = 244 bits (123), Expect = 5e-64
Identities = 199/223 (89%), Gaps = 4/223 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttatagtacgtgtttgaccattt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 62 atcttattcaaaaaatttaagtaattatttattttttt-atatcatttgatttattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||| |||||||||||||| |||||| |||||||||| |||||| ||||||||
Sbjct: 121 aatatactt-catgtacacatataattttacgtatttcataa--tttttttaataagaca 177
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|| |||||||||| || ||||||||||||||||||||||||||
Sbjct: 178 aacggtcaaacatatgttaaaaagtcaacggtgtcaaacattt 220
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||||
Sbjct: 79 aaattttttgaataagataaatggtcaaacacgtactataaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 30 ttcaaaatgtttgacaccgttgacttttta 59
||||||||||||||||||||||||||||||
Sbjct: 224 ttcaaaatgtttgacaccgttgacttttta 195
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 244 bits (123), Expect = 5e-64
Identities = 187/207 (90%), Gaps = 4/207 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccatt 61
Query: 77 cgtcttattcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgt 135
|||||||||||||||| |||||||||||||||| |||||| ||||||| ||| |
Sbjct: 62 cgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcattat 121
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 122 taaatatattttcatgtacacatatagttttacatatttcat--aatttttttaataaga 179
Query: 196 cgaatggtcaaacatgtgctaaaaagt 222
|||||||| ||| | ||||||||||||
Sbjct: 180 cgaatggttaaatacgtgctaaaaagt 206
Score = 99.6 bits (50), Expect = 2e-20
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaa-gtcaacggtgtcaaa 235
|||| |||||||||||||||||||||||||| | || ||||||| |||||||||||||||
Sbjct: 82 taaatttttttgaataagacgaatggtcaaatacgtactaaaaaagtcaacggtgtcaaa 23
Query: 236 catttcgaaacggatggagtat 257
||||| |||||||| |||||||
Sbjct: 22 cattttgaaacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| | ||||||||||||| || | || ||||||||| |||||||| | |||||
Sbjct: 240 tactcccttcatttcaaaatgtttaacggccttaactttttagcacgtatttaaccattc 181
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 180 gtcttattaaaaaaatt 164
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 244 bits (123), Expect = 5e-64
Identities = 210/240 (87%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacgccgttaactttttagtatgtgtttgactattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattatttaatctttttatatcatttgattcattgttt 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| |||||||||||||||||||||||||||||| || ||||||||| |||||||||
Sbjct: 122 aatatattttcatgtacacatatagttttacatattttat-aaatttttttaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| || ||||||||||||||| ||||||||| || |||||||| ||||||| |||||||
Sbjct: 181 aacggccaaacatgtgctaaagagtcaacggcgttaaacattttaaaacggagggagtat 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||||||| |||||||| | ||||||||| ||||| |||||||||
Sbjct: 79 aaatttttttaataagacgaatagtcaaacacatactaaaaagttaacggcgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| |||||||| ||||||
Sbjct: 19 tttgaaacggagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| ||||||||| || ||||||||| ||||| || | |||| | |||
Sbjct: 239 tactccctccgttttaaaatgtttaacgccgttgactctttagcacatgtttggccgttc 180
Query: 78 gtcttattcaaaaaattta 96
|||||||| ||||||||||
Sbjct: 179 gtcttattaaaaaaattta 161
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 238 bits (120), Expect = 3e-62
Identities = 203/233 (87%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
|||||||||||||||| ||||||||||| ||||||| |||| |||| |||||| | ||||
Sbjct: 9 tccgtttcaaaatgttagacaccgttgattttttagcacgtgtttggtcattcattttat 68
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
| |||||||||||||||||||||| ||||| ||||||| ||| |||||||||
Sbjct: 69 taaaaaaatttaagtaattatttattcttttaatatcatttgattcattcttaaatatat 128
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||
Sbjct: 129 tttcatgtacacatatagttttacatatttcacaatttttttttaataagatgaatggtt 188
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||| |||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 189 aaacatgagctaaaaagtcaacggtgacaaacattttgaaacggagggagtat 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgtcaccgttgactttttag 198
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||| | ||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 79 aaatttttttaataaaatgaatgaccaaacacgtgctaaaaaatcaacggtgtctaacat 20
Query: 239 ttcgaaacggat 250
|| |||||||||
Sbjct: 19 tttgaaacggat 8
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 238 bits (120), Expect = 3e-62
Identities = 192/217 (88%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||| ||||||||| ||||||||||| ||||||||| || || ||||| |||||||||||
Sbjct: 8 ctccatttcaaaatatttgacaccgtggactttttaatatgtgtttgaccattcgtctta 67
Query: 84 ttcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatata 143
||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 68 ttcaaaaaatttaagtaattatttattttttt-atatcatttgatttattgttaaataaa 126
Query: 144 ctttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggt 203
|||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||| |||
Sbjct: 127 ctttcatgtacacatataattttacatatttcacaaattttattgaataagacgaacggt 186
Query: 204 caaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||| |||||||||||| ||||
Sbjct: 187 taaacatgtgctaaaaagttaacggtgtcaaatattt 223
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacatattaaaaagtccacggtgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaa-tgtttgacaccgttgactttttagtacgtatttgatcattcg 78
|||||||||||| |||| | |||||||||||| ||||||||| || | ||| | | ||||
Sbjct: 238 ctccctccgtttaaaaaatatttgacaccgttaactttttagcacatgtttaaccgttcg 179
Query: 79 tcttattcaa 88
||||||||||
Sbjct: 178 tcttattcaa 169
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 238 bits (120), Expect = 3e-62
Identities = 192/217 (88%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 30 ttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattcaa 88
|||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||
Sbjct: 13 ttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttatttaa 72
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
||||||||| |||||||||| |||||| ||||||| ||||||||||||| ||||
Sbjct: 73 aaaatttaattaattatttattcttttcatatcatttgattcattgttaaatatattttc 132
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
|| ||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||
Sbjct: 133 atatacacatatagttttacatatttcacaaaaaaaattgaataagacgaacggttaaac 192
Query: 209 atgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||||||||||| |||||||||||||||||||| ||||
Sbjct: 193 atgtgctaaaatgtcaacggtgtcaaacattttgaaa 229
Score = 85.7 bits (43), Expect = 3e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 79 aaattttttaaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaaca 20
Query: 238 ttt 240
|||
Sbjct: 19 ttt 17
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||||||||||||||| |||||| || | ||| | | ||||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgacattttagcacatgtttaaccgttcgtcttattcaa 170
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 197/224 (87%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
|||||||||||||| |||||||||||||||||| | |||||| |||| | ||||| ||||
Sbjct: 2 tactccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct: 62 cgttttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattatt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||| ||||||||||||||||||||||||| ||| |||||| | ||||||
Sbjct: 122 aaatatactttcatatacacatatagttttacatatttcacaaactttttttattaagac 181
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||| |||||||||| ||||||||| |||||||||| ||| ||||
Sbjct: 182 gaacggtcaaacatatgctaaaaaatcaacggtgttaaatattt 225
Score = 87.7 bits (44), Expect = 8e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||||||||| |||||||||||||||||| | |||||| | ||||||||||||||
Sbjct: 80 aaattttttgaataaaacgaatggtcaaacatgtacttaaaaaattaacggtgtcaaaca 21
Query: 238 tttcgaaacggatggagtat 257
||| ||||||| |||||||
Sbjct: 20 ttttaaaacggagggagtat 1
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 236 bits (119), Expect = 1e-61
Identities = 167/183 (91%), Gaps = 3/183 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||
Sbjct: 62 cgtcttattcaaaaaatttaaataattatttattcttttcatatcatttgattcattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 122 aaatatactttaatgt--acatatagttttacatatttcacaaaattttttgaataagac 179
Query: 197 gaa 199
|||
Sbjct: 180 gaa 182
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||
Sbjct: 80 aaattttttgaataagacgaatgatcaaacacgtacttaaaaagtcaacggtgtcaaaca 21
Query: 238 tttcgaaacggatggagta 256
||| |||||||| ||||||
Sbjct: 20 ttttgaaacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacac 46
||||||||||||||||||||||||||||||
Sbjct: 228 gtactccctccgtttcaaaatgtttgacac 199
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 236 bits (119), Expect = 1e-61
Identities = 202/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||| |||||||||||||| |||||||| |||||| || ||||| ||||||||||||
Sbjct: 9 ccgttttaaaatgtttgacacagttgacttgttagtatgtgtttgaccattcgtcttatc 68
Query: 86 caaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
|||||| |||||||||||||| ||||| ||||||| | |||||||||||||
Sbjct: 69 taaaaaaagtaagtaattatttattctttttatatcatttgattcactgttaaatatact 128
Query: 146 ttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtca 205
|||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||| |
Sbjct: 129 ttcatgtacacatatagttttacacatttcataa--tttttttaataagacgaacggtta 186
Query: 206 aacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 187 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 237
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||||||||||||||||||||||||||||||||||||||| || | ||| | | ||
Sbjct: 238 gtactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 179
Query: 77 cgtcttattcaaaaaatt 94
||||||||| ||||||||
Sbjct: 178 cgtcttattaaaaaaatt 161
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 190 ataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||||| | |||| |||||||| |||||||||||||
Sbjct: 67 ataagacgaatggtcaaacacatactaacaagtcaactgtgtcaaacattt 17
>RF01058;MIR806;AP008215.1/601195-601435 39947:Oryza sativa Japonica
Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 197/223 (88%), Gaps = 4/223 (1%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgacttttta--gtacgtatttgatcattcgtctt 82
||||||| |||||||||||| ||||| ||||||| |||||| ||||| |||||||||
Sbjct: 9 tccgttttaaaatgtttgacgccgttagctttttaaagtacgtgtttgactattcgtctt 68
Query: 83 attcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatat 142
||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 69 atttaaaaaatttaagtaattattt--ttttttcatatcatttaatttattgttaaatat 126
Query: 143 actttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatgg 202
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct: 127 actttcatgtacacatatagttttacatatttcataacttttttttaataagacgaacgg 186
Query: 203 tcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
|||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 187 tcaaacatgtgctaaaaagttaacggtgtcaaacattttgaaa 229
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||| |||||||||||||||||||||| ||||||||| || | ||||| | |||
Sbjct: 240 tactcgctccatttcaaaatgtttgacaccgttaactttttagcacatgtttgaccgttc 181
Query: 78 gtcttattcaaaaaa 92
|||||||| ||||||
Sbjct: 180 gtcttattaaaaaaa 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc--taaaaagtcaacggtgtcaaac 236
||||||||| |||||||||||| |||||||| || | ||||||| ||||| |||||||
Sbjct: 81 aaattttttaaataagacgaatagtcaaacacgtactttaaaaagctaacggcgtcaaac 22
Query: 237 atttcgaaacggat 250
|||| ||||||||
Sbjct: 21 attttaaaacggat 8
>RF01058;MIR806;AAAA02000035.1/1574-1333 39946:Oryza sativa Indica
Group
Length = 242
Score = 234 bits (118), Expect = 5e-61
Identities = 189/215 (87%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttatagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||| |||||||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gtcttattcagaaaatttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||| |||||||||||||||||| ||||||| | || | | ||||||||
Sbjct: 122 aatatactttcacgtacacatatagttttacctatttcacgattttctctcgataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtc 232
|| |||||||||||||||||| |||||||||||||
Sbjct: 182 aacggtcaaacatgtgctaaatagtcaacggtgtc 216
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 79 aaattttctgaataagacgaatggtcaaacacgtactataaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 232 bits (117), Expect = 2e-60
Identities = 211/241 (87%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
|||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
|||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattatttttatata-tttgatttattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||| ||| |||||||||||||||||||||||||||| ||| ||||| ||||| ||
Sbjct: 121 aaatatattttaatgtacacatatagttttacatatttcacaaacttttt--aataaaac 178
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||| ||||||||| |||||||| ||||||||||||||||| ||| ||| ||||||
Sbjct: 179 gaacggttaaacatgtgttaaaaagttaacggtgtcaaacattttaaaatggagggagta 238
Query: 257 t 257
|
Sbjct: 239 t 239
Score = 77.8 bits (39), Expect = 7e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||||||||| | | | ||||||||||||||||||||| |
Sbjct: 80 aaattttttgaataagacgaatggtcaaatacatacttaaaaagtcaacggtgtcaaata 21
Query: 238 tttcgaaacggatggagta 256
||| ||||||| ||||||
Sbjct: 20 ttttaaaacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 238 tactccctccattttaaaatgtttgacaccgttaacttttta 197
>RF01058;MIR806;AACV01016852.1/644-883 39947:Oryza sativa Japonica
Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 208/239 (87%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| |||||||||| ||| ||||| |||||||||||||| || ||||| ||| |
Sbjct: 2 tactccctcggtttcaaaatatttaacaccattgactttttagtatgtgtttgaccatac 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||| |||||||||||||||| |||||| ||| ||| |||||||
Sbjct: 62 gtcttatttaaaaattttaagtaattatttatttttt-catatcatttaattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 121 aatatactttcatatacgcatatagttttacatatttcataaattcttttgaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| ||||||| || |||||||||||||||||||||||| |||| ||||||| ||||||
Sbjct: 181 aacggtcaaatatatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 239
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| | ||
Sbjct: 240 gtactccctccgttttaaaatatttgacaccgttgactttttagcatatatttgaccgtt 181
Query: 77 cgtcttattcaaaa 90
||||||||||||||
Sbjct: 180 cgtcttattcaaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||| ||||||||||| | |||||||||||| ||||| ||| |||| |
Sbjct: 75 tttttaaataagacgtatggtcaaacacatactaaaaagtcaatggtgttaaatattttg 16
Query: 243 aaacggatggagta 256
|||| || ||||||
Sbjct: 15 aaaccgagggagta 2
>RF01058;MIR806;AC060755.9/90452-90213 4530:Oryza sativa (rice)
Length = 240
Score = 230 bits (116), Expect = 8e-60
Identities = 203/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||| ||||||||| ||||| |||||||||||||||||| | ||||| ||||
Sbjct: 1 gtactccctccatttcaaaatatttgataccgttgactttttagtatatgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
| ||||||| |||||||||||||||||||||| |||||| || |||| ||||||
Sbjct: 61 catcttatttaaaaaatttaagtaattatttattttttccatatcattcgattaattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| || ||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 121 aaatatacttttatatacacatatagttttacatatttca-caagtttttttaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 180 aaatggtcaaacatatgctaaaaagtcaatggtgtcaaacattttaaaacgga 232
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||| |||||||||||||| | |||||||||||||||| ||||| ||
Sbjct: 79 aaattttttaaataagatgaatggtcaaacatatactaaaaagtcaacggtatcaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| |||| ||| ||||||
Sbjct: 19 tttgaaatggagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||| ||||||||||||||| |||||||||||| | | ||||| ||||
Sbjct: 239 tactctctccgttttaaaatgtttgacaccattgactttttagcatatgtttgaccattt 180
Query: 78 gtcttattcaaaaaa 92
|||||||| ||||||
Sbjct: 179 gtcttattaaaaaaa 165
>RF01058;MIR806;AAAA02006724.1/5899-5657 39946:Oryza sativa Indica
Group
Length = 243
Score = 230 bits (116), Expect = 8e-60
Identities = 202/231 (87%), Gaps = 4/231 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||| |||| ||||||||| |||||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttaacactgttgactttctagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatt---taagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||| || ||| |||||| ||| ||||| ||||||||||||
Sbjct: 62 gtcttattcaaaaatttaattaattaattaattattttttttatatcatttgatttattg 121
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||| ||||||||||||||||||||||||||||||||| | || |||||| ||||||
Sbjct: 122 ttaaatgtactttcatgtacacatatagttttacatatttta-caattttttttaataag 180
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 181 acgaacggtcaaacctgtgctaaaaagtcaacggtgtcaaatatttcgaaa 231
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||||||||||||| || ||| ||||||||| |||| |||||||| |
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactagaaagtcaacagtgttaaacattttg 16
Query: 243 aaacggatggagtat 257
||||||| |||||||
Sbjct: 15 aaacggagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| | |||| |||| |||||||||||||||||||||| || ||||| | |||
Sbjct: 242 tactcccttcatttcgaaatatttgacaccgttgactttttagcacaggtttgaccgttc 183
Query: 78 gtcttattcaaaaaa 92
|||||||| ||||||
Sbjct: 182 gtcttattaaaaaaa 168
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 230 bits (116), Expect = 8e-60
Identities = 201/229 (87%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| ||||
Sbjct: 1 gtactccctccgtttcaaaatatttgataccgttgactttttagtacatgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 cgtcttatt-aaaaaatttaagtaattatttattcttttcatattatttgattcattgtt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||| |||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 120 aaatatactttcaagtacacatatagttttacatatttca-caattttttttaataagac 178
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||| ||||||| || ||||||||||||||| | || |||||||| ||||
Sbjct: 179 gaacggtcaaatatatgctaaaaagtcaactgcgttaaacattttgaaa 227
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||| |
Sbjct: 75 ttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatattttg 16
Query: 243 aaacggatggagta 256
||||||| ||||||
Sbjct: 15 aaacggagggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||| || | ||||||||||||| | ||||||| | ||||||||||| ||
Sbjct: 227 tttcaaaatgtttaacgcagttgactttttagcatatatttgaccgttcgtcttattaaa 168
Query: 89 aaaa 92
||||
Sbjct: 167 aaaa 164
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 228 bits (115), Expect = 3e-59
Identities = 203/231 (87%), Gaps = 4/231 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaa-tgtttgacaccgttgacttttta-gtacgtatttgatca 74
|||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||| ||
Sbjct: 1 gtactccctctatttcaaaaatgtttgacaccgttgactttttaagtacgtgtttgaaca 60
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 61 ttcgtcttattcaaaaaatttaagtaattatttattctttttatacaatttgattcattg 120
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 121 ttaaatatactttcatgtacgcatatagttttacatatttcacaaacttttt--aataag 178
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||||| ||| ||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 179 acgaacggttaaacatgtgctaaaaagtcaacgttatcaaatatttcgaaa 229
Score = 85.7 bits (43), Expect = 3e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 81 aaattttttgaataagacgaatgttcaaacacgtacttaaaaagtcaacggtgtcaaaca 22
Query: 238 ttt 240
|||
Sbjct: 21 ttt 19
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 228 bits (115), Expect = 3e-59
Identities = 201/232 (86%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||| |||||||||||| ||||| |||||||||| |||| ||| | ||||| ||||
Sbjct: 2 tactccccccgtttcaaaatatttgaaaccgttgactgtttaatacatgtttgaccattt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||| |||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gtcttatttaaaaagtttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||| ||| ||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 122 aatatatttttatgcacatatataattttacatatttcacaaaaaattttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||| ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 182 aatggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacgga 233
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccattcgtctta 175
Query: 84 ttcaaaa 90
|||||||
Sbjct: 174 ttcaaaa 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| |||||||| ||||||||||||||| |||| |||||||||| ||||| |||| |
Sbjct: 75 tttttaaataagacaaatggtcaaacatgtattaaacagtcaacggtttcaaatattttg 16
Query: 243 aaacggatggagtat 257
|||||| |||||||
Sbjct: 15 aaacggggggagtat 1
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 228 bits (115), Expect = 3e-59
Identities = 196/224 (87%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||||||||| ||||||| ||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 8 ccgtttcaaaatatttgacatcgttgactttttaatacgtgtttgaccattcgtcttatt 67
Query: 86 caaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
|||||||| ||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 68 aaaaaaatt-aagtaattatttattcttttcatatcatttgattcattgttaaatatact 126
Query: 146 ttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtca 205
|||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||
Sbjct: 127 ttcatgtacacatatagttttacacatttcacaaacttttttgaataatacgaacggtca 186
Query: 206 aacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| || | |||||||||||| |||| |||||||| ||||||||
Sbjct: 187 aatatttactaaaaagtcaatagtgtgaaacattttgaaacgga 230
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||||||||||||||||| || ||||||||||||| ||||||| |||
Sbjct: 76 aatttttttaataagacgaatggtcaaacacgtattaaaaagtcaacgatgtcaaatatt 17
Query: 240 tcgaaacgg 248
| |||||||
Sbjct: 16 ttgaaacgg 8
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||||||||||||||||| |||| |||||||||||||| ||||||| | ||||| ||
Sbjct: 232 cctccgtttcaaaatgtttcacactattgactttttagtaaatatttgaccgttcgtatt 173
Query: 83 attcaaaaaa 92
||||||||||
Sbjct: 172 attcaaaaaa 163
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 228 bits (115), Expect = 3e-59
Identities = 208/240 (86%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||| ||| ||||||||| ||||| |||| |||| ||||||||||||| |||||
Sbjct: 2 tactccatccattttaaaatgtttaacaccattgatttttaagtacgtatttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 122 aatatatttttatgtacacacatagttttacatatttca-caaatttttttaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||| |||||||||||||| ||||||| ||| |||| ||||||| |||||||
Sbjct: 181 aacggtcaaatatgtgctaaaaagttaacggtgataaatattttaaaacggagggagtat 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||| | || || |||| |||| ||||| ||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaaatacgtacttaaaaatcaatggtgttaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| ||| |||||||||||
Sbjct: 19 tttaaaatggatggagtat 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| ||||| ||| ||||||| ||||||||| || ||||||| | |||
Sbjct: 239 tactccctccgttttaaaatatttatcaccgttaactttttagcacatatttgaccgttc 180
Query: 78 gtcttattcaaaaaattt 95
|||||||| |||||||||
Sbjct: 179 gtcttattaaaaaaattt 162
>RF01058;MIR806;AAAA02033862.1/6052-6288 39946:Oryza sativa Indica
Group
Length = 237
Score = 226 bits (114), Expect = 1e-58
Identities = 198/228 (86%), Gaps = 4/228 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||| |||| ||||||||||||||||||| ||||||||| ||| | |||||
Sbjct: 2 tactccctccgttacaaactgtttgacaccgttgacttcttagtacgtgttttaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| ||||| |||||| |||||||||||| || ||| ||||||| |||||||
Sbjct: 62 gttttattaaaaaaa----agtaattatttattcttttcaaatcatttgattcattgtta 117
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 118 aatatactttcatgtacacatatagttttacatgtttcacaaacttttttgaataagacg 177
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
|| |||||||||||||||||||||| || ||||||||| |||| ||||
Sbjct: 178 aacggtcaaacatgtgctaaaaagttaatggtgtcaaatattttgaaa 225
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||| ||||||||| ||||| || |||| ||||||||||||||||||| ||
Sbjct: 76 tttttttaataaaacgaatggtaaaacacgtactaagaagtcaacggtgtcaaacagttt 17
Query: 242 gaaacggatggagta 256
| |||||| ||||||
Sbjct: 16 gtaacggagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||||||| ||||||||| || ||||||||| || | ||||| | |||
Sbjct: 236 tactccctctatttcaaaatatttgacaccattaactttttagcacatgtttgaccgttc 177
Query: 78 gtcttattcaaaaaa 92
|||||||||||||||
Sbjct: 176 gtcttattcaaaaaa 162
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 226 bits (114), Expect = 1e-58
Identities = 208/238 (87%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgt 79
|||||||||||| |||||||||||||||||||||||||| ||| || ||||| | |||||
Sbjct: 5 tccctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgt 64
Query: 80 cttattcaaaaaat-ttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||| |||||| ||||||||||||||| |||||| ||| ||| || |||||
Sbjct: 65 cttatttaaaaaaagttaagtaattatttatttttttcatatcatttaattaatcgttaa 124
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||
Sbjct: 125 ataaactttcatgtacacatatagttttacatatttcacaaatttttt--aataagaaga 182
Query: 199 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
| |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 183 acggtcaaacatgtgctaaaaagtcaacggagtcaaacattttgaaacggagggagta 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||| ||||||||||||||| || | ||||| | |||
Sbjct: 240 tactccctccgtttcaaaatgtttgactccgttgactttttagcacatgtttgaccgttc 181
Query: 78 gtcttattcaaaaa 91
||||||| |||||
Sbjct: 180 ttcttattaaaaaa 167
Score = 81.8 bits (41), Expect = 5e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 240
|||||| ||||||||||| ||||||||| | || |||||||||||||||||||||||||
Sbjct: 77 ttttttaaataagacgaacggtcaaacacttacttaaaaagtcaacggtgtcaaacattt 18
Query: 241 cgaaacgga 249
|||||||||
Sbjct: 17 cgaaacgga 9
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 224 bits (113), Expect = 5e-58
Identities = 154/170 (90%)
Strand = Plus / Minus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 170 ttttaagtacgtgtttgaccattcgtcttattcaaaaattttaagtaattatttattctt 111
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 110 ttcatatcatttgattcattattaaatatactttcacgtacacatatagttttacatatt 51
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 50 tcataaaattttttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaatggtcaaaca 209
|||||||||||||||||||||||||||
Sbjct: 133 tttttgaataagacgaatggtcaaaca 159
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaattt 95
|||||||||| || | ||||| | |||||||||||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttattcaaaaaattt 45
>RF01058;MIR806;AAAA02013694.1/9956-10195 39946:Oryza sativa Indica
Group
Length = 240
Score = 224 bits (113), Expect = 5e-58
Identities = 180/202 (89%), Gaps = 2/202 (0%)
Strand = Plus / Plus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8 ccgtttcaaaatgtttaacaccgttgactttttagtacgtatttgaccattcgtcttatt 67
Query: 86 caaaaaatttaagtaattattta-nnnnnnncatatcgtttgatttattgttaaatatac 144
|||||| ||||||||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 68 taaaaaaattaagtaattatttattttttttcatatcatttgatttatttttaaatatac 127
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 128 tttcatatacacatatagttttacatatttca-caaatttttttaataagacgaacggtc 186
Query: 205 aaacatgtgctaaaaagtcaac 226
||| || | |||||||||||||
Sbjct: 187 aaatatttactaaaaagtcaac 208
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||||||||||||||| | || |||||||||||||||||| ||||||||
Sbjct: 74 ttttttaaataagacgaatggtcaaatacgtactaaaaagtcaacggtgttaaacatttt 15
Query: 242 gaaacgg 248
|||||||
Sbjct: 14 gaaacgg 8
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 48 gttgactttttagtacgtatttgatcattcgtcttattcaaaaaattt 95
||||||||||||||| ||||||| | ||||||||||| |||||||||
Sbjct: 208 gttgactttttagtaaatatttgaccgttcgtcttattaaaaaaattt 161
>RF01058;MIR806;AAAA02021981.1/21983-21742 39946:Oryza sativa Indica
Group
Length = 242
Score = 224 bits (113), Expect = 5e-58
Identities = 211/242 (87%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttga-tttattgtt 136
|||||||||||||||||||||||| ||||| |||||| ||||| | | | |
Sbjct: 62 ttcttattcaaaaaatttaagtaatgatttattcttatcatatcatttgagtccagagct 121
Query: 137 aaatatactttcatgtacacatatagtt-ttacatatttcataaaattttttgaataaga 195
||| ||||| |||| ||||||||||||| ||||||||| | || ||||||||||||||
Sbjct: 122 aaacatactatcatatacacatatagttactacatattttactaatttttttgaataaga 181
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 182 cgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattt-gaaacggagggagt 240
Query: 256 at 257
||
Sbjct: 241 at 242
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 79 aaattttttgaataagaagaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
Score = 109 bits (55), Expect = 2e-23
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 241 tactccctccgtttcaaa-tgtttgacaccgttgactttttagcacgtgtttgaccattc 183
Query: 78 gtcttattcaaaaaa 92
|||||||||||||||
Sbjct: 182 gtcttattcaaaaaa 168
>RF01058;MIR806;AC105770.2/63257-63496 39947:Oryza sativa Japonica
Group
Length = 240
Score = 224 bits (113), Expect = 5e-58
Identities = 207/237 (87%), Gaps = 4/237 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||
Sbjct: 3 gtactccctccgtttcaaaatgtttgacaccgttaactttttagtacgtgtttgaccgtt 62
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||| ||||||||||||| ||||| ||||||| ||||||
Sbjct: 63 cgtcttattaaaaaaatt-aagtaattatttattctttttatatcatttgattcattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||| ||| || |||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 122 aaatatatttttat--acacatatagttttacatatttcacaaattttttt-aataagac 178
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatgga 253
||| ||||||| | || ||||||||||||||||||||| |||| ||||||||||||
Sbjct: 179 aaatagtcaaacgtatgttaaaaagtcaacggtgtcaaatattttgaaacggatgga 235
Score = 97.6 bits (49), Expect = 8e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||||||| ||||||||| || ||||||||| ||||||||||||||||
Sbjct: 80 aatttttttaataagacgaacggtcaaacacgtactaaaaagttaacggtgtcaaacatt 21
Query: 240 tcgaaacggatggagta 256
| |||||||| ||||||
Sbjct: 20 ttgaaacggagggagta 4
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||||||| |||||||||||||||||||||
Sbjct: 231 tccgtttcaaaatatttgacaccgttgacttttta 197
>RF01062;MIR812;AACV01023217.1/3751-3923 39947:Oryza sativa Japonica
Group
Length = 173
Score = 222 bits (112), Expect = 2e-57
Identities = 156/173 (90%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 173 gactttttagtacgtgtttaaccattcgtcttattcaaaaaatttaagtaattatttatt 114
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttacat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||| |||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 53 atttcaaaaaaaaatttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 129 aaattttttgaataagacgaatggttaaacacgtactaaaaagtc 173
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 222 bits (112), Expect = 2e-57
Identities = 201/232 (86%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||| |||||||||||||||| |||||| ||| ||| |||||||
Sbjct: 62 atcttattcaaaaagtttaagtaattatttattcttttcatatcatttaattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||||||||| ||| |||||||||||||| || | |||| |||||||||
Sbjct: 122 aatatactttcatgtacac--ataattttacatatttcactaattattttaaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||| ||| |||||||||||| | |||||||||||| |||| |||||||
Sbjct: 180 aatggttaaatatgtgctaaaaaattaacggtgtcaaatattttaaaacgga 231
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||| ||||||| ||||| || |||||||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagatgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaacggatggagtat 257
||||||| |||||||
Sbjct: 15 aaacggagggagtat 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| |||||||| ||||| |||||||||||| | ||||||| || ||||| | ||||
Sbjct: 239 gtactcactccgttttaaaatatttgacaccgttaattttttagcacatatttaaccatt 180
Query: 77 cgtcttattcaaaa 90
||||||||| ||||
Sbjct: 179 cgtcttatttaaaa 166
>RF01058;MIR806;AACV01005742.1/10101-9864 39947:Oryza sativa
Japonica Group
Length = 238
Score = 222 bits (112), Expect = 2e-57
Identities = 205/236 (86%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
|||||||||||||||||||||| |||||| |||||| ||||||| ||||| |||| |||
Sbjct: 6 ccctccgtttcaaaatgtttgataccgttaacttttcagtacgtgtttgactattcatct 65
Query: 82 tattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaata 141
|||| ||||||| ||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 66 tattaaaaaaatc-aagtagttatttattcttttcatattatttgatttattgttaaata 124
Query: 142 tactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatg 201
|| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |
Sbjct: 125 tattttcatgtacagatatagttttacatatttcataa--tttttttaataagacgaacg 182
Query: 202 gtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||||||||||||| ||||||||||||| |||| |||||||| |||||||
Sbjct: 183 gttaaacatgtgctaaaaagccaacggtgtcaaatattttgaaacggagggagtat 238
Score = 81.8 bits (41), Expect = 5e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| ||||||||||||| |||||||| || | ||| | | |||
Sbjct: 237 tactccctccgtttcaaaatatttgacaccgttggctttttagcacatgtttaaccgttc 178
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 177 gtcttattaaaaaaatt 161
>RF01058;MIR806;AP008212.1/26338977-26339216 39947:Oryza sativa
Japonica Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 201/233 (86%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| |||||||||||||| ||||| |||||||||||||||||| || ||||| ||||
Sbjct: 1 gtactcactccgtttcaaaatatttgataccgttgactttttagtatgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||| |||||||||||||||||||||| |||| ||||||| ||| ||
Sbjct: 61 tatcttatttaaaaaatttaagtaattatttattatttttatattatttgattcattatt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 121 aaatatacttttatgtacatatatagttttacatattttataaaatttttttaataaaac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||| ||| |||||||||||| | |||||||||||||| || ||||||||
Sbjct: 181 gaatggttaaatatgtgctaaaaaattaacggtgtcaaacaatttgaaacgga 233
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||||||||||| |||||||||||||| | ||||||| || ||||| | ||||||| ||
Sbjct: 235 cctccgtttcaaattgtttgacaccgttaattttttagcacatatttaaccattcgtttt 176
Query: 83 attcaaaaaattt 95
||| |||||||||
Sbjct: 175 attaaaaaaattt 163
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||| |||||||||||| | |||||||||||||||| ||||| ||
Sbjct: 79 aaattttttaaataagataaatggtcaaacacatactaaaaagtcaacggtatcaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
>RF01058;MIR806;AACV01014691.1/845-606 39947:Oryza sativa Japonica
Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 187/213 (87%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 28 gtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattca 87
||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 12 gtttcaaaatgtttgaccccgttgactttttagtacgggtttgaccattcatcttattca 71
Query: 88 aaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatacttt 147
||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 72 aaaaatttaagtaattatttattcttttcatattatttgatttattgttaaatatacttt 131
Query: 148 catgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaa 207
||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||
Sbjct: 132 catttacacatatagttttacatatttca-caaattttttaaataagacgaacggttaag 190
Query: 208 catgtgctaaaaagtcaacggtgtcaaacattt 240
||| | |||||| |||||| |||||||| ||||
Sbjct: 191 catatactaaaatgtcaacagtgtcaaatattt 223
Score = 87.7 bits (44), Expect = 8e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||
Sbjct: 79 aaattttttgaataagatgaatggtcaaacccgtactaaaaagtcaacggggtcaaacat 20
Query: 239 ttcgaaac 246
|| |||||
Sbjct: 19 tttgaaac 12
>RF01058;MIR806;AP005190.3/32973-32734 39947:Oryza sativa Japonica
Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 208/240 (86%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||||||||||||||||||||| | ||| |||| ||| ||| | |||||
Sbjct: 2 tactccctctgtttcaaaatgtttgacaccgttaattttgtagtgcgtgttttaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||| ||| |||||| ||||||| |||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattacttattcttctcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaa-attttttgaataagac 196
|||||| |||||||||||| |||||| || |||||||||||| |||||| ||||||||
Sbjct: 122 aatatattttcatgtacac--atagttgtatatatttcataaattttttttaaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 180 gaacagtcaaacatgtgctaaagagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||||||||||||||| ||||| || | ||||| |||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactctttagcacatgtttgactgttc 180
Query: 78 gtcttattcaaaaaa 92
|||||||| ||||||
Sbjct: 179 gtcttatttaaaaaa 165
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||| ||||| | ||| ||| | |||||||||||||||
Sbjct: 79 aaatttttttaataagacgaatggtaaaacacgcactacaaaattaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| ||||| || ||||||
Sbjct: 19 tttgaaacagagggagta 2
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 222 bits (112), Expect = 2e-57
Identities = 192/218 (88%), Gaps = 6/218 (2%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattca 87
|||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||
Sbjct: 19 tttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtcttattca 78
Query: 88 aaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatacttt 147
||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 79 aaaaatttaagtaattatttattctttttatatcatttgatttattgttaaatatacttt 138
Query: 148 catgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaa 207
||||| |||||||||||||||||||||| ||||||||| ||||||||||| | |
Sbjct: 139 gatgtatacatatagttttacatatttca-caaatttttttaataagacgaa----cgat 193
Query: 208 catgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
|||||| |||||||||||||||||||||||||| ||||
Sbjct: 194 catgtgttaaaaagtcaacggtgtcaaacattttgaaa 231
Score = 87.7 bits (44), Expect = 8e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||||
Sbjct: 86 aaattttttgaataagacgaatggtcaaatatgtacttaaaaaatcaacggtgtcaaaca 27
Query: 238 tttcgaaa 245
||| ||||
Sbjct: 26 ttttgaaa 19
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 242 tactccctctatttcaaaatgtttgacaccgttgacttttta 201
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 222 bits (112), Expect = 2e-57
Identities = 201/232 (86%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||| ||||||||||||| || | ||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacatcgttgactttttaatatatgtttgaccattt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||||| |||||| ||| ||| |||||||
Sbjct: 62 gtcttatttaaaaaatttaagtaattatttattcttttcatatcattttattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
| |||||||| || |||||||||||||||||||||||| | |||||||| ||| |||||
Sbjct: 122 attatacttttatatacacatatagttttacatatttc--acaatttttttaatgagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| ||| ||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 180 aacggttaaacatgtgctaaaaagtcaacggtgttaaatattttgaaacgga 231
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| ||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 79 aaattttttaaataagacaaatggtcaaacatatattaaaaagtcaacgatgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| ||||||||||||||| ||| |||||||||||||||||| || | ||| | | |||
Sbjct: 238 tactacctccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccgttc 179
Query: 78 gtcttattcaaaaaatt 94
|||| ||| ||||||||
Sbjct: 178 gtctcattaaaaaaatt 162
>RF01058;MIR806;AP003517.3/100961-100723 39947:Oryza sativa Japonica
Group
Length = 239
Score = 222 bits (112), Expect = 2e-57
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| |||| |||||||||||||||||||||||| ||||| | ||||| | |||
Sbjct: 2 tactccctcggttttaaaatgtttgacaccgttgactttctagtatatgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttgttgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||| ||| ||||||||| | |||||||| |||||||||
Sbjct: 122 aatatactttcatgtacacatataatttcacatatttc--acaatttttttaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|||||| ||| | | |||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 180 aatggttaaatacgcactaaaacgttaacggtgttaaatatttcgaaacggatggagtat 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||| |||||||||| | ||| |||||||||||||||||||||
Sbjct: 79 aaatttttttaataagacgaacggtcaaacatatactagaaagtcaacggtgtcaaacat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| |||| ||| |||||||| || ||||||| ||||||| | |||||
Sbjct: 238 tactccatccgtttcgaaatatttaacaccgttaacgttttagtgcgtatttaaccattc 179
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 178 gtcttattaaaaaaatt 162
>RF01058;MIR806;AAAA02011276.1/49843-50075 39946:Oryza sativa Indica
Group
Length = 233
Score = 220 bits (111), Expect = 8e-57
Identities = 186/212 (87%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 46 ccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattat 105
||||||||||||||| |||| ||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 23 ccgttgactttttagcacgtgtttgaccatttgtcttattcaaaaaaattaagtaattat 82
Query: 106 ttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttt 165
||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 83 ttattcttttcatatcatttgattaattgttaaatatactttcatgtacacatataggtt 142
Query: 166 tacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaa 225
||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 143 tacatatttca-caaatttttttaataagacgaacagtcaaacacgtgctaaaaagtcaa 201
Query: 226 cggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||||||| ||||||| |||||||
Sbjct: 202 cgtagtcaaacattttaaaacggagggagtat 233
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| |||||||||||| |||||||||||||| |||| ||||| |||
Sbjct: 232 tactccctccgttttaaaatgtttgactacgttgactttttagcacgtgtttgactgttc 173
Query: 78 gtcttattcaaaaaattt 95
|||||||| |||||||||
Sbjct: 172 gtcttattaaaaaaattt 155
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacgg 228
||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 69 ttttttgaataagacaaatggtcaaacacgtgctaaaaagtcaacgg 23
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 220 bits (111), Expect = 8e-57
Identities = 197/228 (86%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||||| | ||||| |||||||| ||| ||||| ||||||||||||||||
Sbjct: 14 tttcaaaatgtttgatattgttgattttttagtgcgtgtttgaccattcgtcttattcaa 73
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
|||||||||||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct: 74 aaaatttaagtaattatttattctttttatatcatttaatttattgttaaatatactttc 133
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
||||||||||||| |||||||||||||| |||| ||| ||||| ||||| ||| ||||
Sbjct: 134 atgtacacatataattttacatatttcaaaaaaaaatttaaataaaacgaacggttaaac 193
Query: 209 atgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||||||||||||| ||| |||| ||||||| ||||||
Sbjct: 194 atgtgctaaaaagtcaacggtgttaaatattttaaaacggagggagta 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| | ||||||| ||||| | ||||||||
Sbjct: 80 aaattttttgaataagacgaatggtcaaacacgcactaaaaaatcaacaatatcaaacat 21
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 20 tttgaaa 14
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 241 tactccctccgttttaaaatatttaacaccgttgactttttag 199
>RF01058;MIR806;AC145327.2/52567-52806 39947:Oryza sativa Japonica
Group
Length = 240
Score = 220 bits (111), Expect = 8e-57
Identities = 186/212 (87%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||| |||||||||||||||||||||| |||| ||| | |||| |||||||| ||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttaggacgtgtttaaccattagtcttatttaa 72
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
|||||||||||||||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 73 aaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttt 132
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
| |||||||||||||||||||||||||| ||| |||||| |||| ||||| |||||||
Sbjct: 133 acgtacacatatagttttacatatttcacaaactttttt-aatagaacgaacagtcaaac 191
Query: 209 atgtgctaaaaagtcaacggtgtcaaacattt 240
|| |||||||||||||||||||||||||||||
Sbjct: 192 atatgctaaaaagtcaacggtgtcaaacattt 223
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| |||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 79 aaattttttaaataagactaatggttaaacacgtcctaaaaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 239 tactctctacgttttaaaatgtttgacaccgttgactttttag 197
>RF01058;MIR806;AAAA02018250.1/70399-70160 39946:Oryza sativa Indica
Group
Length = 240
Score = 220 bits (111), Expect = 8e-57
Identities = 207/240 (86%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| | ||||
Sbjct: 1 gtactccatccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||| |||||| |||||| ||||| ||||||| ||||||
Sbjct: 61 cgtcttattaaaaaaatt-aagtaactatttattctttttatatcatttgattcattgtt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| ||||||||||||||||||||||||||| ||| |||||| | ||||||
Sbjct: 120 aaatatacttttatgtacacatatagttttacatatttcgcaaattttttttattaagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| |||||||||||||||||| ||||||| | ||| ||||| |||||||| ||||||
Sbjct: 180 gaacagtcaaacatgtgctaaaacgtcaacgataccaaccattttgaaacggagggagta 239
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| |||
Sbjct: 78 aatttttttaataagacgaatggttaaacacgtactaaaaagtcaacggtgtcaaatatt 19
Query: 240 tcgaaacggatggagta 256
| |||||||||||||||
Sbjct: 18 ttgaaacggatggagta 2
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 239 tactccctccgtttcaaaatggttggtatcgttgacgttttag 197
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 220 bits (111), Expect = 8e-57
Identities = 202/232 (87%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| | |||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 2 tactcccttcatttcaaaatgtttgacaccgttcactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 62 gtcttattcaacaaatttaagtaattatttattctttt-atatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| |||||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 121 aatatattttcatgtacacatatagttttacatatttca-caattttttttaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| ||| |||||| | ||||||||| |||||| ||||| |||| ||| ||||
Sbjct: 180 aacggttaaacatatactaaaaagttaacggtatcaaatattttgaagcgga 231
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||| |||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 79 aaatttgttgaataagacgaatggtcaaacacgtactaaaaagtgaacggtgtcaaacat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
Score = 56.0 bits (28), Expect = 3e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||| ||||||| |||||||| ||||| |||||| ||||||||||| | ||| | | ||
Sbjct: 239 gtacaccctccgcttcaaaatatttgataccgttaactttttagtatatgtttaaccgtt 180
Query: 77 cgtcttattcaaaaaa 92
||||||||| ||||||
Sbjct: 179 cgtcttattaaaaaaa 164
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 205/239 (85%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||| ||||||| ||||||||||| |||| ||||||| || | |||||| |||
Sbjct: 2 tactccccccgtttctaaatgtttgacgtcgttaactttttttaacatgtttgattgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||| ||||||||||||||| | |||||| ||||||| |||||||
Sbjct: 62 gtcttattaaaaacatttaagtaattattaattcctttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| || ||||||||||||||||| | |||| |||||||||||||||
Sbjct: 122 aatatatttttatgtagacgtatagttttacatattttacaaaagtttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 182 aatggtcaaacatatgctaaaaagtcaacggtgtcaaatatttagaaacggatggagta 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| |||| |||||||||||||||||||||| | | ||||| |||||
Sbjct: 240 tactccatccgtttctaaatatttgacaccgttgactttttagcatatgtttgaccattc 181
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 3e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||| |||| ||||||||||| |||||||||| ||||||| |||| |||||||||
Sbjct: 79 aaatgtttttaataagacgaacaatcaaacatgttaaaaaaagttaacgacgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| ||||||| |||||||
Sbjct: 19 ttagaaacggggggagtat 1
>RF01058;MIR806;AAAA02035035.1/12905-13144 39946:Oryza sativa Indica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 208/241 (86%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||| | ||||
Sbjct: 1 gtactccctccatttcaaaatatttgataccgttgactttttagtacgttttttaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||||||||||||| ||||| |||||| || |||||||| ||||||||
Sbjct: 121 aaatatactttcatgtacacatataattttatatattt--tataatttttttaataagac 178
Query: 197 gaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
||| | | ||| || | | |||||||| |||||||||||| |||| ||||||| |||||
Sbjct: 179 gaacgattaaatatatacttaaaaagttaacggtgtcaaatattttaaaacggagggagt 238
Query: 256 a 256
|
Sbjct: 239 a 239
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||| ||| | || |||||||||||||||| ||||| ||
Sbjct: 79 aaatttttttaataagacgaatggtaaaaaacgtactaaaaagtcaacggtatcaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| |||| ||| ||||||
Sbjct: 19 tttgaaatggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
|||||||||||||| ||||| |||||||||||| ||||||| |||| ||||| ||| ||
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttaactttttaagtatatatttaatcgtt 180
Query: 77 cgtcttattcaaaaaatt 94
||||||||| ||||||||
Sbjct: 179 cgtcttattaaaaaaatt 162
>RF01058;MIR806;AAAA02018369.1/11191-11429 39946:Oryza sativa Indica
Group
Length = 239
Score = 216 bits (109), Expect = 1e-55
Identities = 211/242 (87%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | ||||
Sbjct: 1 gtactccctccgtttcaaaatgtttcaaaccgttgactttttagtacgtgttttaccatt 60
Query: 77 cgtcttattc-aaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgt 135
| |||||||| |||||||||||| ||||||||| |||||| ||||| | |||||
Sbjct: 61 catcttattcaaaaaaatttaaggaattatttattcttttcatatcatttgaatcattgt 120
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||||||||||| ||||||||||||| ||||| |||| ||||||||| ||||||
Sbjct: 121 taaatatactttcatgcacacatatagtttcacata-ttca-caaattttttttataaga 178
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
|||| |||||||||||||||||||| |||| |||||||||||||| |||||| | |||||
Sbjct: 179 cgaacggtcaaacatgtgctaaaaa-tcaatggtgtcaaacattttgaaacgaagggagt 237
Query: 256 at 257
||
Sbjct: 238 at 239
Score = 87.7 bits (44), Expect = 8e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||||||||||| ||||||| ||||| || |||||||||||||||| | ||||
Sbjct: 81 taaatttttttgaataagatgaatggtaaaacacgtactaaaaagtcaacggtttgaaac 22
Query: 237 atttcgaaacggatggagta 256
|||| |||||||| ||||||
Sbjct: 21 attttgaaacggagggagta 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| ||||||||||||||||||||| |||| ||||||| || | ||||| | |||
Sbjct: 238 tactcccttcgtttcaaaatgtttgacaccattga-tttttagcacatgtttgaccgttc 180
Query: 78 gtcttattcaaaaaattt 95
||||||| |||||||||
Sbjct: 179 gtcttataaaaaaaattt 162
>RF01058;MIR806;AAAA02031935.1/254-13 39946:Oryza sativa Indica
Group
Length = 242
Score = 216 bits (109), Expect = 1e-55
Identities = 210/242 (86%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| ||||||||| ||||||||||||||||| ||||||| | |||| |||||
Sbjct: 2 tactccctccatttcaaaatctttgacaccgttgacttcttagtacatgcttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnn-cat-atcgtttgatttattgt 135
| ||||||||| ||||||||| ||||||||| ||| ||| | |||||||||||
Sbjct: 62 ggcttattcaagaaatttaagcaattatttatttttgttcatcatcatctgatttattgt 121
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 122 taaatatactttcatgtacacatatagttttacatatttcacaatttttgttgaataaga 181
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
||| ||||| ||||||| | |||||||||||||||||||||||| |||||||| |||||
Sbjct: 182 tgaacggtcacacatgtgat-aaaagtcaacggtgtcaaacattttgaaacggagggagt 240
Query: 256 at 257
||
Sbjct: 241 at 242
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||| ||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||
Sbjct: 79 aaatttcttgaataagccgaatggtcaagcatgtactaagaagtcaacggtgtcaaagat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||| ||| |||||||
Sbjct: 19 tttgaaatggagggagtat 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttt 57
||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactccctccgtttcaaaatgtttgacaccgttgactttt 202
>RF01058;MIR806;AP008212.1/21880161-21879923 39947:Oryza sativa
Japonica Group
Length = 239
Score = 212 bits (107), Expect = 2e-54
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||||| |||| || ||||||||| || ||||| | |||
Sbjct: 2 tactccctccgtttcaaaatgtttgccaccattaactttttagcgtgtgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||| || |||||||||| ||||| |||||||||||||||
Sbjct: 62 gtcttattaaaaaaattaaa-taattatttattctttttatatcatttgatttattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||||||||| ||||||| || |||||||| ||| ||||||||||||||||
Sbjct: 121 aatatactttcatgtacacgtatagttgtatatatttcacaaa-ttttttgaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||| |||||||||| ||||||||||||||||||||| ||| |||| ||||||
Sbjct: 180 aacggtcaaatatgtgctaaagagtcaacggtgtcaaacattttaaaatggatagagtat 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||||||||||||||||||| ||||| || ||||||| | ||||||||||||||||||
Sbjct: 223 aaaatgtttgacaccgttgactctttagcacatatttgaccgttcgtcttattcaaaaaa 164
Query: 93 ttt 95
|||
Sbjct: 163 ttt 161
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||||||| ||||||||| |||||||||| || |||| ||||||||
Sbjct: 78 aatttttttaataagacgaacggtcaaacacacgctaaaaagttaatggtggcaaacatt 19
Query: 240 tcgaaacggatggagtat 257
| |||||||| |||||||
Sbjct: 18 ttgaaacggagggagtat 1
>RF01058;MIR806;AL731600.3/67344-67602 39947:Oryza sativa Japonica
Group
Length = 259
Score = 212 bits (107), Expect = 2e-54
Identities = 194/223 (86%), Gaps = 3/223 (1%)
Strand = Plus / Plus
Query: 36 atgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat-t 94
||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||| |
Sbjct: 39 atgtttgacaccgatgactatttagtacgtatttgaccatttgtcttattcaaaaaaaat 98
Query: 95 taagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtac 154
| |||||||||||| ||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 99 tgagtaattatttattctttttatatcatttgattcattgttaaatatacttttatgtac 158
Query: 155 acatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgc 214
|||||||||||||||||||| || |||||||| ||||||| ||| ||||||||||| |
Sbjct: 159 acatatagttttacatattt--tataatttttttaataagatgaacggtcaaacatgcac 216
Query: 215 taaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 217 taaaaagtcaacgatgtcaagcattttgaaacggatggagtat 259
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||||||||| |||||| ||||||||||||||| | | ||||| | |||
Sbjct: 258 tactccatccgtttcaaaatgcttgacatcgttgactttttagtgcatgtttgaccgttc 199
Query: 78 gtcttattcaaaaaatt 94
||||||| ||||||||
Sbjct: 198 atcttattaaaaaaatt 182
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||| |||||||||| | || ||||| ||||| |||||||||||||
Sbjct: 95 ttttttgaataagacaaatggtcaaatacgtactaaatagtcatcggtgtcaaacat 39
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 212 bits (107), Expect = 2e-54
Identities = 199/230 (86%), Gaps = 9/230 (3%)
Strand = Plus / Plus
Query: 35 aatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattcaaaaa-- 91
||||||| |||||||||| |||||| | | || ||||| |||||||||||||||||||
Sbjct: 19 aatgtttaacaccgttgattttttaagcatgtgtttgaccattcgtcttattcaaaaata 78
Query: 92 -----atttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactt 146
||||||||||||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 79 tttaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactt 138
Query: 147 tcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaa 206
|||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||
Sbjct: 139 tcatatacacatatagttttacatatttcacaaa-ttttttgaataagacgaacggtcaa 197
Query: 207 acatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|||||||||||||||| |||||||||||| |||| |||||||| ||||||
Sbjct: 198 acatgtgctaaaaagttaacggtgtcaaatattttgaaacggagggagta 247
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||||||| ||||||||| || | ||||| | |||
Sbjct: 247 tactccctccgtttcaaaatatttgacaccgttaactttttagcacatgtttgaccgttc 188
Query: 78 gtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 187 gtcttattcaaaaaattt 170
Score = 67.9 bits (34), Expect = 7e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatt 239
||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||
Sbjct: 76 tttttgaataagacgaatggtcaaacacatgcttaaaaaatcaacggtgttaaacatt 19
>RF01058;MIR806;AACV01006891.1/73451-73212 39947:Oryza sativa
Japonica Group
Length = 240
Score = 210 bits (106), Expect = 8e-54
Identities = 201/231 (87%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||||||||||||||| ||||||||||||| ||||||| | | | |||||
Sbjct: 2 tactctctccgtttcaaaatgtttgataccgttgactttt-agtacgtgtctaaccattc 60
Query: 78 gtcttattcaaaaaatttaa-gtaattatttannnnnnncatatcgtttgatttattgtt 136
|||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 61 gtcttattcaaaaaatttaaagtaattatttattctttttatatcatttgattcattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||| || ||||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 121 aaatatactttcatgcacccatatagttttacatattttataaactttttt-aataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacg 247
||| ||| |||||||||||||||||| || |||||||| |||| ||||||
Sbjct: 180 gaacggttaaacatgtgctaaaaagttaatggtgtcaagtattttgaaacg 230
Score = 77.8 bits (39), Expect = 7e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||| | ||| || |||||| ||||||||| ||||||||
Sbjct: 78 aaattttttgaataagacgaatggttagacacgtactaaaa-gtcaacggtatcaaacat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
Score = 46.1 bits (23), Expect = 3e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||| ||||||||||| |||||||| || ||||||||| || | ||| | | |||
Sbjct: 239 tactcccaacgtttcaaaatacttgacaccattaactttttagcacatgtttaaccgttc 180
Query: 78 gtcttattcaaaaaattta 96
|||||||| ||||| ||||
Sbjct: 179 gtcttattaaaaaagttta 161
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 210 bits (106), Expect = 8e-54
Identities = 199/230 (86%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||| |||||||||||||||||||||||| | ||| | |||| |||||||||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttagtatatgtttaaccatttgtcttattcaa 72
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
|||||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct: 73 aaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttc 132
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
||||| ||||||||||||| ||||||| |||||||| ||||||||||| | | ||||
Sbjct: 133 atgtatacatatagttttatatatttc--gcaatttttttaataagacgaacgattaaac 190
Query: 209 atgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| || |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 191 ataggcttaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||||| |||||| |||||| | |||||||||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacaaatggttaaacatatactaaaaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgacttttta 198
>RF01058;MIR806;AAAA02018287.1/668-427 39946:Oryza sativa Indica
Group
Length = 242
Score = 208 bits (105), Expect = 3e-53
Identities = 169/190 (88%), Gaps = 2/190 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||| |||||||| |||||| || || ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttga-accgttgattttttaatatgtgtttgaccattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||| ||||||||||||||| |||||| ||||||| |||||||
Sbjct: 61 gtcttattaaaaaaaattaagtaattatttattattttcatatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 121 aatatactttcatgtacacatatagttttacatatttcat-aattttttttaataagacg 179
Query: 198 aatggtcaaa 207
|| |||||||
Sbjct: 180 aacggtcaaa 189
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||||||||||||||||| | |||||| |||||||| ||||||||||
Sbjct: 75 tttttttaataagacgaatggtcaaacacatattaaaaaatcaacggt-tcaaacatttt 17
Query: 242 gaaacggatggagta 256
|||||||| ||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 207/241 (85%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
|||||||| | ||| ||||||||||||||| || ||||||| ||| || || || ||||
Sbjct: 2 tactccctacattttaaaatgtttgacaccattaacttttttagt--gtgttcgaccatt 59
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct: 60 cgtcttattaaaaaaatttaagtaattatttattattttcatatcatttgattcattgtt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||| ||||| ||||||||||||| |||||||||||||| || || ||| ||||||||
Sbjct: 120 aaataaactttgatgtacacatataattttacatatttcacaattttattttaataagac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct: 180 gaacggtcaaatatgtgctaaaaagtcaacggtatcaaacattttgaaacggagggagta 239
Query: 257 t 257
|
Sbjct: 240 t 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||| |||||||||||||||| || ||||||| | |||
Sbjct: 239 tactccctccgtttcaaaatgtttgataccgttgactttttagcacatatttgaccgttc 180
Query: 78 gtcttatt 85
||||||||
Sbjct: 179 gtcttatt 172
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
||||||||| |||||||||||||||| ||||
Sbjct: 78 aaatttttttaataagacgaatggtcgaaca 48
>RF01058;MIR806;AAAA02023902.1/640-883 39946:Oryza sativa Indica
Group
Length = 244
Score = 208 bits (105), Expect = 3e-53
Identities = 204/236 (86%), Gaps = 5/236 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgttt-caaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||||||||| |||||||||||| | |||||| |||| || |||| ||||| ||||
Sbjct: 2 tactccctccgttttcaaaatgtttgaaatcgttgatttttgagcacgtgtttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
|||||||| |||||||||||||||||||||| | |||| ||||||| ||||||
Sbjct: 62 tgtcttattaaaaaaatttaagtaattatttattcttttcgtatcatttgattcattgtt 121
Query: 137 aaat---atactttcatgtacacatatagttttacatatttcataaaattttttgaataa 193
|||| ||||||||||||||||||||||||| |||||||||| ||| |||||| |||||
Sbjct: 122 aaattatatactttcatgtacacatatagtttgacatatttcacaaattttttt-aataa 180
Query: 194 gacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||| |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gacgaacaatcaaacatatgctaaaaagtcaacggtgtcaaacattttgaaacgga 236
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||| |||||||||||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 244 gtacttcctccgtttcaaaatgtttgacaccgttgactttttagcatatgtttgattgtt 185
Query: 77 cgtcttattcaaaaaattt 95
||||||||| |||||||||
Sbjct: 184 cgtcttattaaaaaaattt 166
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| |||||||||||| ||||| |||| |||||| | ||||||||
Sbjct: 80 aaatttttttaataagacaaatggtcaaacacgtgctcaaaaatcaacgatttcaaacat 21
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 20 tttgaaa 14
>RF01058;MIR806;AC210447.1/112690-112455 4538:Oryza glaberrima
(African rice)
Length = 236
Score = 206 bits (104), Expect = 1e-52
Identities = 197/229 (86%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||||||||| ||||| ||||| ||||||||| || ||||| | | ||
Sbjct: 2 tactcgctccgtttcaaaatatttgaggccgttaactttttagcacatattttaccgttt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||| | | |||| ||||||| |||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattattaattattttcctatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaa-ttttttgaataagac 196
|||||| ||| ||||| |||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 122 aatatatttttatgtaggcatataattttacatatttcataaaagttttttgaataagac 181
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 182 gaatgatcaaacatgtgctaaaaagtcaacggtgttaaacattttgaaa 230
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||| |||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 230 tttcaaaatgtttaacaccgttgactttttagcacatgtttgatcattcgtcttattcaa 171
Query: 89 aaaa 92
||||
Sbjct: 170 aaaa 167
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| || ||| ||| |||||||||||||| ||||| ||||| ||
Sbjct: 79 aaatttttttaataagacaaacggtaaaatatgtgctaaaaagttaacggcctcaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
>RF01058;MIR806;AACV01011934.1/13088-12853 39947:Oryza sativa
Japonica Group
Length = 236
Score = 206 bits (104), Expect = 1e-52
Identities = 205/240 (85%), Gaps = 7/240 (2%)
Strand = Plus / Plus
Query: 19 actccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcg 78
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 3 actccctccgtttcaaaatgtttgacaccattgactttttagtacgtgtttgaccattcg 62
Query: 79 tcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 63 tcttattcaaaaaatttaagtaattatttattattttcatat------attcattgttaa 116
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||||||||| |||||||||| || ||||| ||||||||||||||||||| ||||||||||
Sbjct: 117 atatacttttatgtacacatgtaattttatatatttcataaaatttttttaataagacga 176
Query: 199 atggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
| |||| ||||| ||||||||||||| || |||| ||| || |||||||||||||
Sbjct: 177 acatgtaaacctgtgcttaaaaagtcaacgatgccaaatattctgagacggatggagtat 236
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaatggtgtcaaacat 20
Query: 239 ttcgaaacggatggagt 255
|| |||||||| |||||
Sbjct: 19 tttgaaacggagggagt 3
>RF01058;MIR806;AP008207.1/25048910-25049151 39947:Oryza sativa
Japonica Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 206/238 (86%), Gaps = 7/238 (2%)
Strand = Plus / Plus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||| |||||||||||||||||||| |||||||||||| ||||| ||||| |||||
Sbjct: 8 ctccgttttaaaatgtttgacaccgttga-tttttagtacgtctttgaccattcatctta 66
Query: 84 ttcaaaaaa---tttaagtaattatttannnnnnncatatcgtttgatttattgttaaat 140
||||||||| |||||||| ||||||| |||||| ||||||||||||||||||
Sbjct: 67 ttcaaaaaaaaatttaagtagttatttattcttttcatatcatttgatttattgttaaat 126
Query: 141 atactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaat 200
||||||||||||||||||||||||||| ||||||| | |||||||| |||||| |||
Sbjct: 127 atactttcatgtacacatatagttttatatatttc--acaatttttttaataaggtgaac 184
Query: 201 ggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||||||| |||||| ||||| ||||||||||||| |||| ||| |||||||
Sbjct: 185 agtcaaacatgtgcttaaaaaatcaactgtgtcaaacattttgaaatggagggagtat 242
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||||||||||| ||||||||||| | || ||||||| |||||||||||||||||||
Sbjct: 75 ttttttgaataagatgaatggtcaaagacgtactaaaaa-tcaacggtgtcaaacatttt 17
Query: 242 gaaacgga 249
|||||||
Sbjct: 16 aaaacgga 9
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 241 tactccctccatttcaaaatgtttgacacagttgatttttta 200
>RF01058;MIR806;AAAA02034792.1/4708-4947 39946:Oryza sativa Indica
Group
Length = 240
Score = 206 bits (104), Expect = 1e-52
Identities = 198/227 (87%), Gaps = 6/227 (2%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa- 92
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 17 aaatgtttgacaccgttgactttttagtacgtgtttgatcattcatcttattcaaaaaaa 76
Query: 93 tttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgt 152
|||||||||||||||| || || |||| || |||||||||||||||||||||
Sbjct: 77 tttaagtaattatttattatttt-atgtcatttggttcgttgttaaatatactttcatgt 135
Query: 153 acacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgt 212
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||
Sbjct: 136 acacatatagttttacatatttcacaaaattttt--aataagacgagcggtcaaacatgt 193
Query: 213 gctaaaaagtcaac--ggtgtcaaacatttcgaaacggatggagtat 257
|||||||| ||||| ||||||| ||||| ||| |||| |||||||
Sbjct: 194 gctaaaaaatcaacagagtgtcaatcattttgaaccggagggagtat 240
Score = 87.7 bits (44), Expect = 8e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||||||||||| ||||| ||||||| || |||||||||||||||||||||||
Sbjct: 80 taaatttttttgaataagatgaatgatcaaacacgtactaaaaagtcaacggtgtcaaac 21
Query: 237 attt 240
||||
Sbjct: 20 attt 17
>RF01058;MIR806;AP005885.3/85239-85476 39947:Oryza sativa Japonica
Group
Length = 238
Score = 206 bits (104), Expect = 1e-52
Identities = 200/232 (86%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| |||||||||||||||||| ||| | |||||||||||| |||| |||||
Sbjct: 2 tactccctccatttcaaaatgtttgacacagttaaatttttagtacgtgcttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||| |||||||| | |||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaaataattattcattcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||||||||| || ||||| | | ||||| ||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttatatttttca-agagttttt--aataagaca 178
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| |||||||||| ||||||||||| |||||||||||| |||| |||||||
Sbjct: 179 aacggtcaaacatatgctaaaaagttaacggtgtcaaatattttaaaacgga 230
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||||||||||||||| || || ||||||| | ||| |||||||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaagcacgtactaaaaatttaactgtgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| |||| ||| ||||||
Sbjct: 19 tttgaaatggagggagta 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||| ||||||||| ||||| |||||||||||| |||||||||
Sbjct: 237 tacttcctccgttttaaaatatttgacaccgttaactttttag 195
>RF01062;MIR812;AAAA02034426.1/30822-30993 39946:Oryza sativa Indica
Group
Length = 172
Score = 204 bits (103), Expect = 5e-52
Identities = 154/172 (89%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaaatatttatttatt 113
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 112 cttttcatatcatttgattcattgttaaatatactttcatgtaca-atatagttttacat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagt 222
|||||| |||||||||| ||||||||||| |||||||||||| |||||||||
Sbjct: 53 atttcacaaaatttttttaataagacgaacggtcaaacatgtactaaaaagt 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 128 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtc 172
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 52 actttttagtacgtatttgatcattcgtcttattcaaaaaattt 95
|||||||||||| | ||||| | ||||||||||| |||||||||
Sbjct: 2 actttttagtacatgtttgaccgttcgtcttattaaaaaaattt 45
>RF01058;MIR806;AAAA02007631.1/1078-840 39946:Oryza sativa Indica
Group
Length = 239
Score = 204 bits (103), Expect = 5e-52
Identities = 195/224 (87%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
||||||||| |||||||||||||| |||| || |||||||| |||||||||||| |||
Sbjct: 2 tactccctctgtttcaaaatgtttaacactattaactttttaagtacgtatttgactatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||| ||||||||||| |||||||||||||||| ||||| ||||| | ||||||
Sbjct: 62 cgttttattcaaaaa-tttaagtaattatttatactttttatatcatttgaatcattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcat-aattttttttaataagat 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||| ||||||| || || ||||||||||||||||||||||||||
Sbjct: 180 gaacggtcaaatatatgttaaaaagtcaacggtgtcaaacattt 223
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||| |||||| |||||||||||||||||||||||||||| | ||||||| | ||
Sbjct: 239 gtactccttccgtt-caaaatgtttgacaccgttgactttttaacatatatttgaccgtt 181
Query: 77 cgtcttattcaaaaaa 92
| ||||||| ||||||
Sbjct: 180 catcttattaaaaaaa 165
>RF01058;MIR806;AAAA02018392.1/9429-9624 39946:Oryza sativa Indica
Group
Length = 196
Score = 204 bits (103), Expect = 5e-52
Identities = 162/183 (88%), Gaps = 2/183 (1%)
Strand = Plus / Plus
Query: 49 ttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattattta 108
||||||||||| |||| ||||| |||||||||| || ||||||||||||||||||||||
Sbjct: 11 ttgactttttaacacgtgtttgaccattcgtcttgtttaaaaaatttaagtaattattta 70
Query: 109 nnnnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttac 168
|||||| ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 71 ttcttttcatatcatttgattcattgttaaatatactttcatatacacatatagttttac 130
Query: 169 atatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacgg 228
|||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 131 atatttcataaa--ttttttaataagacgaaaggtcaaatatgtgctaaaaagtcaacgg 188
Query: 229 tgt 231
|||
Sbjct: 189 tgt 191
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaa 225
||||||||| || |||||||||||||||||| ||| |||||||||||
Sbjct: 57 aaattttttaaacaagacgaatggtcaaacacgtgttaaaaagtcaa 11
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 43 acaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaattta 96
|||||||||||||||||| || ||||||| | ||||||||||| ||||||||||
Sbjct: 191 acaccgttgactttttagcacatatttgacctttcgtcttatt-aaaaaattta 139
>RF01058;MIR806;AL731587.2/124021-123783 39947:Oryza sativa Japonica
Group
Length = 239
Score = 204 bits (103), Expect = 5e-52
Identities = 192/223 (86%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| |||| |||| |||||||||||||| ||||||||||||| |||| ||||| |||||
Sbjct: 2 tacttcctctgttttaaaatgtttgacactgttgactttttagaacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||| ||||||||||||||| |||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaaattaagtaattatttattttttttgtatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||| || || |||||||||||||||||||||||| | |||||||| ||||||||
Sbjct: 122 aatatacatttatatacacatatagttttacatatttc--acaatttttttaataagaca 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|| ||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 180 aacggttaaatatgtgctaaaaagtcaacggtgtcaaatattt 222
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacgttctaaaaagtcaacagtgtcaaacattt 18
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| ||| |||| ||||| |||||||||||||||||||||| || ||||| | | ||
Sbjct: 238 tactctctctgttttaaaatatttgacaccgttgactttttagcacatatttaaccgttt 179
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 178 gtcttattaaaaaaatt 162
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 204 bits (103), Expect = 5e-52
Identities = 186/216 (86%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
|||||||||||||||||||||| || | |||| ||||| | ||||| ||||| ||||||
Sbjct: 9 tccgtttcaaaatgtttgacactattaatttttaagtacatgtttgaccattcatcttat 68
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
| |||||| | ||||||||||||| |||||| ||||||| ||| |||||||||
Sbjct: 69 taaaaaaaatcaagtaattatttattcctttcatatcatttgattcattattaaatatat 128
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||| |||||| |||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 129 tttcatatacacacatagttttacatatttcacaaatatttttgaataagacgaacggtc 188
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||||||||||||||||| ||||
Sbjct: 189 aaacatgtgctaaaaagtcaacggtgtcaaatattt 224
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||| ||||| |||||||||||||||||||||| || | ||||| | |||
Sbjct: 240 tactccctctattttaaaatatttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||| |||||||||||||||| || |||| | || |||||||||||||
Sbjct: 76 tttttttaataagatgaatggtcaaacatgtacttaaaaattaatagtgtcaaacatttt 17
Query: 242 gaaacgga 249
||||||||
Sbjct: 16 gaaacgga 9
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 202 bits (102), Expect = 2e-51
Identities = 192/223 (86%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
|||||||||||||||||||||||||| | | ||||| | ||| ||| ||||||| |||
Sbjct: 18 aaatgtttgacaccgttgactttttaaaatatgtttgaccgttcttctcattcaaacaat 77
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
|||||||| |||||| ||||| ||||||| |||||||||||||||||||||||
Sbjct: 78 ttaagtaactatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
| |||||||||||||||||||||| | ||||||| ||||||||||| ||| ||| || ||
Sbjct: 138 cccatatagttttacatatttcat-agatttttttaataagacgaacggttaaatatatg 196
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 197 ctaaaaagtcaacggtgtcaaacattttgaaacggaaggagta 239
Score = 89.7 bits (45), Expect = 2e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||| |||||||||||||||||||||||||||||||||||| | ||||| | | ||
Sbjct: 240 gtactccttccgtttcaaaatgtttgacaccgttgactttttagcatatatttaaccgtt 181
Query: 77 cgtcttattcaaaaaat 93
||||||||| |||||||
Sbjct: 180 cgtcttattaaaaaaat 164
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||| ||||||| ||| ||| |||||||||| | ||||||||||||||||||||||||
Sbjct: 79 aaattgtttgaatgagaagaacggtcaaacatattttaaaaagtcaacggtgtcaaacat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
>RF01058;MIR806;AAAA02008185.1/15144-15373 39946:Oryza sativa Indica
Group
Length = 230
Score = 202 bits (102), Expect = 2e-51
Identities = 204/237 (86%), Gaps = 11/237 (4%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 2 tactccctccgttttaaaatgtttgacaccgttgattttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||| |||||||||| ||| ||| || ||| |||
Sbjct: 62 atcttattcaaaaaatttaaataattatttat--------tat--tttcatatatagttt 111
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||| ||||||||||| ||||||||||| |||||||| || |||||| |||||||||
Sbjct: 112 tatatattttcatgtacatatatagttttatatatttcacaatttttttt-aataagacg 170
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 171 aacggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacggatggag 227
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||
Sbjct: 79 aaattttttgaataagatgaatggtcaaacacgtactaaaaaatcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| ||||||| |||||||
Sbjct: 19 tttaaaacggagggagtat 1
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||| ||||||| |||||||||||||||||||||||||||| |||| ||||| | |||||
Sbjct: 227 ctccatccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcgt 168
Query: 80 cttattcaaaaaa 92
|||||| ||||||
Sbjct: 167 cttattaaaaaaa 155
>RF01058;MIR806;ABRL01001931.1/4966-5201 65489:Oryza barthii
Length = 236
Score = 202 bits (102), Expect = 2e-51
Identities = 205/240 (85%), Gaps = 5/240 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| || ||||||||||||||| | || || || || |||||||||||
Sbjct: 2 tactccctccgttttaatatgtttgacaccgttaatttcttttta-gtgtttgatcattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||| |||||| || ||||||| |||||| ||||||| |||||||
Sbjct: 61 gtcttattcaaaatatttaattatttatttatttttttcatatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 121 aatatactttcatgtacacatatagttttacatatttcacaaaaaaatttaaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|||||| ||| |||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 181 aatggt----catatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagtat 236
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 235 tactccctccgttttaaaatatttgacaccgttgactttttag 193
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
|||| |||||||||||||||||| |||||||
Sbjct: 78 aaatattttgaataagacgaatgatcaaaca 48
>RF01058;MIR806;AAAA02030957.1/6469-6721 39946:Oryza sativa Indica
Group
Length = 253
Score = 202 bits (102), Expect = 2e-51
Identities = 205/241 (85%), Gaps = 13/241 (5%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtactccctccgtttcaaaatatttgacaccgttgactttttagtacgtatttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
|||||||||||||||||||||||| ||||||| ||||| | ||||| ||||||
Sbjct: 61 cgtcttattcaaaaaatttaagtatttatttattcttttcatatgatctgattcattgtt 120
Query: 137 aaatatact----------ttcatgtacacatatagttttacatatttcataaaattttt 186
||||||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 121 aaatatactttcatgtctattcatgtagacatgtagttttacatatttcataaaattttt 180
Query: 187 tgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaa 245
||||| ||||| ||||||||||| | |||||||| | ||||||||||||||| ||||
Sbjct: 181 --aataaaacgaacagtcaaacatgtacttaaaaagttagcggtgtcaaacattttgaaa 238
Query: 246 c 246
|
Sbjct: 239 c 239
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaatggtcaaatacgtactaaaaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| |||||||| ||||||
Sbjct: 19 tttgaaacggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgacttttta 59
|||| ||||||||||||||||||||| | ||||||||
Sbjct: 244 cctctgtttcaaaatgtttgacaccgctaacttttta 208
>RF01058;MIR806;AAAA02007727.1/39772-40015 39946:Oryza sativa Indica
Group
Length = 244
Score = 202 bits (102), Expect = 2e-51
Identities = 185/214 (86%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgacttttt--agtacgtatttgatcattcgtcttattc 86
|||||||||||||||||||||||| ||||| | ||||| ||| | ||||||| ||||||
Sbjct: 14 tttcaaaatgtttgacaccgttgatttttttaattacgtgtttaaccattcgttttattc 73
Query: 87 aaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactt 146
|||||||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 74 aaaaaatttaagtaattatttattcttttcatatcatttgattctttgttaaatatactt 133
Query: 147 tcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaa 206
| || ||||| ||||||||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 134 ttatatacacctatagttttacatatttcacaaatttttttaaataagatgaacggtcaa 193
Query: 207 acatgtgctaaaaagtcaacggtgtcaaacattt 240
|||| ||||||||| |||| ||||||||||||||
Sbjct: 194 acatatgctaaaaattcaatggtgtcaaacattt 227
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgct--aaaaagtcaacggtgtcaaac 236
||||||||||||||| ||||||||| ||||| || | ||||| |||||||||||||||
Sbjct: 82 aaattttttgaataaaacgaatggttaaacacgtaattaaaaaaatcaacggtgtcaaac 23
Query: 237 atttcgaaa 245
|||| ||||
Sbjct: 22 attttgaaa 14
>RF01058;MIR806;AAAA02026273.1/286-45 39946:Oryza sativa Indica
Group
Length = 242
Score = 200 bits (101), Expect = 7e-51
Identities = 208/242 (85%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||| |||||
Sbjct: 2 tactccctcccttttaaaatgttttacaccgttgactttttaacacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||| ||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 62 gtcttattcaataaatttaagtaattatttattcttttcatatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatt-tcataaaattttttgaataagac 196
|||||||||||||||||||||||||||||||||||| | | | ||||| ||||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatattaatttcacacttttttaataagac 181
Query: 197 gaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
||| ||| |||||||| | ||||||||||| || || ||| |||| |||||||| |||||
Sbjct: 182 gaacggttaaacatgtacttaaaaagtcaatggcgt-aaatattttgaaacggagggagt 240
Query: 256 at 257
||
Sbjct: 241 at 242
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct: 79 aaatttattgaataagacgaatggtcaaacacgtgttaaaaagtcaacggtgtaaaacat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
Score = 46.1 bits (23), Expect = 3e-04
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
|||||||||||||||||||| ||| || || |||||||||| ||||| | ||| | | ||
Sbjct: 241 tactccctccgtttcaaaatattt-acgccattgactttttaagtacatgtttaaccgtt 183
Query: 77 cgtcttattcaaaaa 91
||||||||| |||||
Sbjct: 182 cgtcttattaaaaaa 168
>RF01058;MIR806;AACV01018965.1/447-687 39947:Oryza sativa Japonica
Group
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 203/234 (86%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||||||||||| |||||| |||||||| || | ||| | ||| |
Sbjct: 2 tactccctccgtttcaaaatgttatgcaccgtatgctttttagcacatgtttaaccat-c 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnn-catatcgtttgatttattgtt 136
|||||||| |||||||| ||||||||||||| |||||| ||||||| ||||||
Sbjct: 61 gtcttattaaaaaaatt-aagtaattatttattttttttcatatcatttgattcattgtt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaa-taaga 195
||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||
Sbjct: 120 aaatatactttcatgtacacatataattttacatatttcataattttttttaaaataaga 179
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 180 cgaatagtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 233
Score = 87.7 bits (44), Expect = 8e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| |||||||||||||||||||||||||||||||||||||| || | ||||| ||||
Sbjct: 240 tacttcctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgactattc 181
Query: 78 gtcttatt 85
||||||||
Sbjct: 180 gtcttatt 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| |||||||||| |||| ||||||||||||||||| |||||| ||||||
Sbjct: 77 aatttttttaataagacga-tggttaaacatgtgctaaaaagcatacggtgcataacatt 19
Query: 240 tcgaaacggatggagtat 257
| |||||||| |||||||
Sbjct: 18 ttgaaacggagggagtat 1
>RF01062;MIR812;AACV01009588.1/14109-13940 39947:Oryza sativa
Japonica Group
Length = 170
Score = 198 bits (100), Expect = 3e-50
Identities = 151/169 (89%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 168 ttttaagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattctt 109
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 108 ttcatatcatttgattcattgttaaatatactttcacgtacacatatagttttatatatt 49
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagt 222
||| ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 48 tca-caaattgttttaataagacgaatggtcaaacatgtgctaaaaagt 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
|||||||||||||||||||||||||||||||
Sbjct: 127 aaattttttgaataagacgaatggtcaaaca 157
>RF01062;MIR812;AP005480.2/81366-81538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 198 bits (100), Expect = 3e-50
Identities = 153/173 (88%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
|||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 173 gactttttagcacgtgtttaaccattcgtcttattcaaaaaatttaagtaattatttatt 114
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
||| || ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 113 cttttcatctcatttgattcattgttaaataacctttcatgtacacatatagttttacat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 53 atttcacaattttttttaaataagacgaatggtcaaacatgtgctaaaaagtc 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 129 aaattttttgaataagacgaatggttaaacacgtgctaaaaagtc 173
>RF01062;MIR812;AP005658.3/58267-58095 39947:Oryza sativa Japonica
Group
Length = 173
Score = 198 bits (100), Expect = 3e-50
Identities = 153/173 (88%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 173 gactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtatttatttatt 114
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 113 cttttcatatcatttgattcattgttaaatatatttttatgtacacatatagttttacat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||||||| ||| |||||||| ||||| |||||||||||| || |||||||
Sbjct: 53 atttcataaattttattgaataaaacgaacggtcaaacatgtacttaaaagtc 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 129 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtc 173
>RF01062;MIR812;AP008217.1/21142327-21142498 39947:Oryza sativa
Japonica Group
Length = 172
Score = 198 bits (100), Expect = 3e-50
Identities = 154/173 (89%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 172 gacttcttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttatt 113
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||||| ||||||| ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 112 attttcatatcatttgattcattgttaaatatacttttatatacacatataattttacat 53
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||| ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 52 atttca-caaatttttttaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||||||||||||| || |||| |||||
Sbjct: 128 aaattttttgaataagacgaatggtcaaacacgtactaagaagtc 172
>RF01058;MIR806;AAAA02006403.1/1537-1777 39946:Oryza sativa Indica
Group
Length = 241
Score = 198 bits (100), Expect = 3e-50
Identities = 198/233 (84%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
||||||||||||||||||||| ||| |||||| ||||||||||| | ||| |||||||
Sbjct: 9 tccgtttcaaaatgtttgacaaagttaacttttgagtacgtatttaacgatttgtcttat 68
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
||||||||||||| |||||||||| ||||| ||| ||| |||||||||||||
Sbjct: 69 tcaaaaaatttaaataattatttattctttttatatcatttaattcattgttaaatatat 128
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
||||||||||||||||||||||| |||||||| || |||||| ||||| ||||| ||||
Sbjct: 129 tttcatgtacacatatagttttatatatttcacaattttttttaaataaaacgaacggtc 188
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||| || ||||||||||| ||| |||||||| |||| |||||||| |||||||
Sbjct: 189 aaatatatgctaaaaagttaacagtgtcaaatattttgaaacggagggagtat 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||| ||| ||||||||| | ||||||| | |||
Sbjct: 240 tactccctccgtttcaaaatatttgacactgttaactttttagcatatatttgaccgttc 181
Query: 78 gtcttattcaaaaaa 92
|| ||||| ||||||
Sbjct: 180 gttttatttaaaaaa 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||||| ||| || ||| | || || |||||| ||| ||||||||||
Sbjct: 79 aaattttttgaataagacaaatcgttaaatacgtactcaaaagttaactttgtcaaacat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
>RF01058;MIR806;AACV01007621.1/52559-52322 39947:Oryza sativa
Japonica Group
Length = 238
Score = 198 bits (100), Expect = 3e-50
Identities = 205/240 (85%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||||||||||||| ||||||| |||| |||||||| ||||| |||||||||||
Sbjct: 2 tactccatccgtttcaaaatatttgacatcgttaactttttaatacgtgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||| ||||||||||||| |||| ||||||| ||||||
Sbjct: 62 gtcttattaaaaaaatt-aagtaattatttattctttttatattatttgattcgttgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| |||||||| ||||||||||||||||||||| |||| |||||| ||||||| |
Sbjct: 121 aatatattttcatgtgcacatatagttttacatattttataa--tttttttaataagatg 178
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| ||||||| ||||||||||||||||||| ||| ||| | || |||||||| |||||||
Sbjct: 179 aacggtcaaatatgtgctaaaaagtcaacgatgttaaataatttgaaacggagggagtat 238
Score = 81.8 bits (41), Expect = 5e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||||||||| ||||||| || |||||||| |||| ||||||| |||
Sbjct: 78 aatttttttaataagacgaatgatcaaacacgtattaaaaagttaacgatgtcaaatatt 19
Query: 240 tcgaaacggatggagta 256
| |||||||||||||||
Sbjct: 18 ttgaaacggatggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||| | ||| ||| |||||||||||||| || ||||||| | |||
Sbjct: 237 tactccctccgtttcaaattatttaacatcgttgactttttagcacatatttgaccgttc 178
Query: 78 gtcttattcaaaaaatt 94
||||||| ||||||||
Sbjct: 177 atcttattaaaaaaatt 161
>RF01058;MIR806;AC105928.2/57418-57177 39947:Oryza sativa Japonica
Group
Length = 242
Score = 198 bits (100), Expect = 3e-50
Identities = 205/241 (85%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| ||||| || |||||||| | |||||| ||||| ||||| |||||
Sbjct: 2 tactccctccgttttaaaatattgcacaccgttaattttttaatacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||| |||||||||||| ||||||||| |||||| ||| ||| |||||||
Sbjct: 62 atcttatttaaaaaatttaagcaattatttattcttttcatatcatttaattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttga-ataagac 196
|||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcataattttttttaatataagac 181
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||||||||| | |||||||||||| |||||||| |||| ||||| || ||||||
Sbjct: 182 gaacagtcaaacatatattaaaaagtcaacagtgtcaaatattttgaaacagagggagta 241
Query: 257 t 257
|
Sbjct: 242 t 242
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 241 tactccctctgtttcaaaatatttgacactgttgacttttta 200
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||| ||||||||||||| || |||||| | |||||||| || ||
Sbjct: 79 aaattttttaaataagatgaatggtcaaacacgtattaaaaaattaacggtgtgcaatat 20
Query: 239 ttcgaaacggatggagta 256
|| ||||||| ||||||
Sbjct: 19 tttaaaacggagggagta 2
>RF01058;MIR806;AAAA02025783.1/3210-3453 39946:Oryza sativa Indica
Group
Length = 244
Score = 196 bits (99), Expect = 1e-49
Identities = 192/223 (86%), Gaps = 3/223 (1%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgacttttt--agtacgtatttgatcattcg 78
||||||||||| ||||| |||||||||||| ||||||| ||||||| ||||| ||||
Sbjct: 5 tccctccgttttaaaatatttgacaccgttaacttttttaagtacgtgtttgaccattta 64
Query: 79 tcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||||||||||||||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 65 tcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaa 124
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||||| |||||||||||||||| |||||| |||||||| |||||||||| ||||| || |
Sbjct: 125 atatattttcatgtacacatatggttttatatatttcacaaaattttttaaataaaacaa 184
Query: 199 atggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattt 240
| |||||||||||||| || | | ||||||||||| |||||||
Sbjct: 185 acggtcaaacatgtgcttagataatcaacggtgtcgaacattt 227
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgct--aaaaagtcaacggtgtcaaac 236
||||||||||||||||| |||||||||||| || || ||||||| ||||||||||||
Sbjct: 81 aaattttttgaataagataaatggtcaaacacgtacttaaaaaagttaacggtgtcaaat 22
Query: 237 atttcgaaacgga 249
|||| |||||||
Sbjct: 21 attttaaaacgga 9
>RF01058;MIR806;AL713932.4/119735-119496 4530:Oryza sativa (rice)
Length = 240
Score = 196 bits (99), Expect = 1e-49
Identities = 131/144 (90%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattttttcttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatata 161
||||||||||||||||||||||||
Sbjct: 122 aatatactttcatgtacacatata 145
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaattttttgaataagacgaacggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
>RF01058;MIR806;AACV01015075.1/1512-1276 39947:Oryza sativa Japonica
Group
Length = 237
Score = 196 bits (99), Expect = 1e-49
Identities = 201/232 (86%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgt-ttttaccattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| ||||| |||||| ||||||||||||||| |||||| ||||||| |||||||
Sbjct: 61 gttttatttaaaaaa-ttaagtaattatttattcttttcatatcatttgattcattgtta 119
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||| || || ||| | |||||||||||||| |||||||| |||||||||
Sbjct: 120 aatatactttcacgtgcagata-aaatttacatatttcat-gaatttttttaataagacg 177
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||| |||||| ||||||||||||||||| ||||| ||| |||| |||||||
Sbjct: 178 aatagtcaaatatgtgctaaaaagtcaaaggtgttaaatattttaaaacgga 229
Score = 83.8 bits (42), Expect = 1e-15
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||| ||||||||| ||| | || ||||||||||||||||||||||||||
Sbjct: 77 aattttttaaataaaacgaatggtaaaa-acgtactaaaaagtcaacggtgtcaaacatt 19
Query: 240 tcgaaacggatggagtat 257
| |||||||| |||||||
Sbjct: 18 ttgaaacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||| ||||| ||| ||||| |||||||||||| || ||||||| ||||
Sbjct: 236 tactctctccgttttaaaatatttaacacctttgactttttagcacatatttgactattc 177
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 176 gtcttattaaaaaaatt 160
>RF01058;MIR806;AACV01010775.1/2057-2297 39947:Oryza sativa Japonica
Group
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 202/236 (85%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtatttgatcattcgtc 80
||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||
Sbjct: 6 ccctctgtttcaaaatgttttacaccgttgactttttaaatacgtatttgatcatttgtc 65
Query: 81 ttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaat 140
||||| ||||| ||||| |||||||||| ||||| ||||||| ||||||||||
Sbjct: 66 ttatttaaaaattttaattaattatttattctttttatatcatttgattcattgttaaat 125
Query: 141 atactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaat 200
||| ||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 126 atatttttatgtacacatatagttttacatatttca-caaatttttttaatacgacgaac 184
Query: 201 ggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| |||||| ||||||||||| |||||| ||||| |||| ||||||| ||||||
Sbjct: 185 agttaaacatatgctaaaaagttaacggtatcaaatattttaaaacggagggagta 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||||||||| ||||| ||||| |||||| |||||||||
Sbjct: 240 tactccctccgttttaaaatatttgataccgttaactttttag 198
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacatttcgaaac 246
||||||||||||||||| |||||||| |||||
Sbjct: 43 taaaaagtcaacggtgtaaaacattttgaaac 12
>RF01058;MIR806;AP005804.2/167343-167104 39947:Oryza sativa Japonica
Group
Length = 240
Score = 196 bits (99), Expect = 1e-49
Identities = 204/240 (85%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||| ||||| |||| ||||||||| ||||| || || ||||| ||||
Sbjct: 1 gtactccctccgttttaaaatatttggcaccgttgatttttttatatgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||| ||||| |||||||||||||||||||||| |||||| ||||||| |||| |
Sbjct: 61 cgttttatttaaaaaatttaagtaattatttattcttttcatatcatttgattcattgct 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||||||||||||||||||||||||||||||||| | |||||| ||||| ||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttca-catttttttttaataaaac 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||| |||||| ||||||||||| || ||||||||| |||| |||| ||| ||||||
Sbjct: 180 gaacggttaaacatatgctaaaaagttaatggtgtcaaatattttgaaatggagggagta 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||| ||||||||| ||||||||| || |||||||||
Sbjct: 240 gtactccctccatttcaaaatatttgacaccattaactttttag 197
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||| ||||||||||||||| | ||||| ||||||||| |||| ||
Sbjct: 79 aaattttttaaataaaacgaatggtcaaacacatataaaaaaatcaacggtgccaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| ||||||| ||||||
Sbjct: 19 tttaaaacggagggagta 2
>RF01058;MIR806;AP003243.3/61784-62019 39947:Oryza sativa Japonica
Group
Length = 236
Score = 194 bits (98), Expect = 5e-49
Identities = 125/134 (93%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 102 tttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaat 161
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| |
Sbjct: 162 tttttgaataagacgaatgatcaaacatgtggtaaaaaatcaacagtgtcaaacatttag 221
Query: 243 aaacggatggagta 256
||||||| ||||||
Sbjct: 222 aaacggagggagta 235
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||||| ||||| |||||| || | |||||||||||
Sbjct: 235 tactccctccgtttctaaatgtttgacactgttgattttttaccacatgtttgatcattc 176
Query: 78 gtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 175 gtcttattcaaaaaattt 158
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||| |||||||||||||||||||||| | ||||||| |||||||||||| |||
Sbjct: 78 atttttttaataagacgaatggtcaaacatattttaaaaagataacggtgtcaaatatta 19
Query: 241 cgaaacggatggag 254
|||||||| ||||
Sbjct: 18 agaaacggagggag 5
>RF01058;MIR806;AAAA02013533.1/10091-9859 39946:Oryza sativa Indica
Group
Length = 233
Score = 194 bits (98), Expect = 5e-49
Identities = 202/239 (84%), Gaps = 10/239 (4%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||| ||| ||||||||||||||| ||||||||||||||| | ||||| ||||
Sbjct: 1 gtactccctccattttaaaatgtttgacaccattgactttttagtacatgtttgaccatt 60
Query: 77 cgtctta-ttcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgt 135
| ||||| || |||||||||||||||||||||| |||||| ||||||| ||| |
Sbjct: 61 catcttatttaaaaaaatttaagtaattatttatttttttcatatcatttgattcattat 120
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||||||||| | ||| | |||||||||||||| |||||| |||||||
Sbjct: 121 taaatatactttcacggacatacatagttttacatat---------tttttttaataaga 171
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 172 taaatggtcaaacatgtgctaaaaagtcaacggtatcaaacattttgaaacggatggag 230
Score = 87.7 bits (44), Expect = 8e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||
Sbjct: 81 taaatttttttaaataagatgaatggtcaaacatgtactaaaaagtcaatggtgtcaaac 22
Query: 237 attt 240
||||
Sbjct: 21 attt 18
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||| ||||||||||||||||||| |||||||||||||||| || | ||||| |||| |
Sbjct: 230 ctccatccgtttcaaaatgtttgataccgttgactttttagcacatgtttgaccatttat 171
Query: 80 cttattcaaaaaa 92
|||||| ||||||
Sbjct: 170 cttattaaaaaaa 158
>RF01058;MIR806;AP008211.1/4813545-4813786 39947:Oryza sativa
Japonica Group
Length = 242
Score = 194 bits (98), Expect = 5e-49
Identities = 200/233 (85%), Gaps = 5/233 (2%)
Strand = Plus / Plus
Query: 28 gtttcaaaatgtttgacaccgttgacttttta--gtacgtatttgatcattcgtcttatt 85
|||||||||||||||||||| |||| |||||| |||||| ||| | |||| ||||||||
Sbjct: 12 gtttcaaaatgtttgacaccattgattttttaaagtacgtgtttcaccatttgtcttatt 71
Query: 86 caaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
||||||||||||||||||||| |||||| ||||||| || ||||||||||||
Sbjct: 72 taaaaaatttaagtaattattttttcttttcatatcatttgattcatcgttaaatatact 131
Query: 146 ttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtca 205
||||| || | ||||||||||||||||||| | | |||||| |||||||||||||||||
Sbjct: 132 ttcatatatatatatagttttacatatttc--acattttttttaataagacgaatggtca 189
Query: 206 aacatgtgctaaaa-agtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||| |||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 190 aacatatgctaaaataatcaacggtgtcaaacatttcgaaacggtgggagtat 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgact-ttttagtacgtatttgatcatt 76
||||||| ||||||| ||||||||||||||||||| | |||||| | | ||||| ||||
Sbjct: 241 tactcccaccgtttcgaaatgtttgacaccgttgattattttagcatatgtttgaccatt 182
Query: 77 cgtcttattcaaaaaa 92
||||||||| ||||||
Sbjct: 181 cgtcttattaaaaaaa 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgct--aaaaagtcaacggtgtcaaac 236
||||||||| |||||||| |||||| ||||| || || ||||| |||| ||||||||||
Sbjct: 81 aaattttttaaataagacaaatggtgaaacacgtactttaaaaaatcaatggtgtcaaac 22
Query: 237 atttcgaaac 246
|||| |||||
Sbjct: 21 attttgaaac 12
>RF01058;MIR806;AP008212.1/26178843-26179082 39947:Oryza sativa
Japonica Group
Length = 240
Score = 194 bits (98), Expect = 5e-49
Identities = 166/191 (86%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||| ||||||||||||| |||||| ||||||||||||| | | |||| ||||
Sbjct: 50 tttgaccattcgtcttattaaaaaaaattaagtaattattaattcttttcctatcatttg 109
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||| ||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||
Sbjct: 110 attcattgttaaatatactttcatgtatatttatagctttacatatttcacaaaattttt 169
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 170 tgaatgagacgaacggtcaaatatgtgctaaaaagtcaacggtgtcaaacatttagaaac 229
Query: 247 ggatggagtat 257
|| |||||||
Sbjct: 230 agagggagtat 240
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||| ||||||||||||||||||||||||||| || ||||||| | |||
Sbjct: 239 tactccctctgtttctaaatgtttgacaccgttgactttttagcacatatttgaccgttc 180
Query: 78 gtcttattcaaaaaattt 95
|||| |||||||||||||
Sbjct: 179 gtctcattcaaaaaattt 162
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgt 212
|||||| ||||||||||||||||||||||||
Sbjct: 75 tttttttaataagacgaatggtcaaacatgt 45
>RF01058;MIR806;AACV01025108.1/1606-1848 39947:Oryza sativa Japonica
Group
Length = 243
Score = 194 bits (98), Expect = 5e-49
Identities = 209/243 (86%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| ||||| |||||||||||||| | | || || || ||||
Sbjct: 2 tactccctccgtttcaaaatatttgaaaccgttgactttttggcaggtgttggaccattg 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||| |||||||||||||||||||||||||| |||||| || |||| |||| ||
Sbjct: 62 gtctaattcaaaaaatttaagtaattatttattcttttcatatcattggattcattg-ta 120
Query: 138 aatatac-tttcatgtaca-catatagttttacatatttcataaaattttttgaataaga 195
||||||| ||||||||||| ||||||| ||||||||||||| ||||||||| |||||||
Sbjct: 121 aatatacttttcatgtacaccatataggtttacatatttcaccaaattttttaaataaga 180
Query: 196 cgaatggt-caaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 181 cgaatggtgaaaacacgtgctaaaaaggaaacggtgtcaaacattttgaaacggagggag 240
Query: 255 tat 257
|||
Sbjct: 241 tat 243
Score = 85.7 bits (43), Expect = 3e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgt-atttgatcatt 76
||||||||||||||||||||||||||||||||| |||||||| |||| ||| | ||||
Sbjct: 242 tactccctccgtttcaaaatgtttgacaccgtttcctttttagcacgtgttttcaccatt 183
Query: 77 cgtcttattcaaaaaattt 95
||||||||| |||||||||
Sbjct: 182 cgtcttatttaaaaaattt 164
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||| |||| ||||||| |||| ||| |||||||||||||| ||||| ||
Sbjct: 79 aaattttttgaattagaccaatggtccaacacctgccaaaaagtcaacggtttcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 19 tttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02022678.1/8425-8663 39946:Oryza sativa Indica
Group
Length = 239
Score = 192 bits (97), Expect = 2e-48
Identities = 200/233 (85%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtctta 83
||||||||| ||| || ||||||| |||||||||| |||||| ||| |||| |||||
Sbjct: 9 tccgtttcagaatattggacaccgatgactttttaagtacgtgttta--catttatctta 66
Query: 84 ttcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatata 143
|||||||| |||||||||||||||| |||||| ||||||| |||||||||||||
Sbjct: 67 ttcaaaaattttaagtaattatttattcttttcatatcatttgattcattgttaaatata 126
Query: 144 ctttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggt 203
||||||||||||||||||||||||||||||| || |||| |||| ||||||||||| | |
Sbjct: 127 ctttcatgtacacatatagttttacatatttaat-aaatatttttaataagacgaacgat 185
Query: 204 caaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|||||| |||||| |||||||||||||||||| |||| |||| |||||||||
Sbjct: 186 caaacacgtgctataaagtcaacggtgtcaaatattttaaaacagatggagta 238
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| || |||| ||||| |||||||||||||||||| ||| |||| ||||||| |||
Sbjct: 238 tactccatctgttttaaaatatttgacaccgttgactttatagcacgtgtttgatcgttc 179
Query: 78 gtcttattcaaaaaattta 96
|||||||| |||| |||||
Sbjct: 178 gtcttattaaaaatattta 160
>RF01058;MIR806;AAAA02009185.1/29593-29833 39946:Oryza sativa Indica
Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 206/242 (85%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||| ||||||||| |||||||||||| |||||| |||| || ||||| ||||
Sbjct: 1 gtactccctccatttcaaaatatttgacaccgttaacttttcagtatgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
|| |||||| ||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 tgttttattctaaaaatttaagtaattatttatttttttcatattatttgattcattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataa-aattttttgaataaga 195
||||||||| || ||||||||||||||||||||||||| || |||||| |||||||
Sbjct: 121 cgatatacttttatatacacatatagttttacatatttcacaattttttttttaataaga 180
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
|||| |||||||| | |||||||||||||||||||||||| |||| |||||| | |||||
Sbjct: 181 cgaacggtcaaac-tatgctaaaaagtcaacggtgtcaaatatttagaaacgaagggagt 239
Query: 256 at 257
||
Sbjct: 240 at 241
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||| |||||| |||| ||||||||||||||||||||||
Sbjct: 240 tactcccttcgtttctaaatatttgacaccgttgactttttag 198
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||| |||||| || |||||||||||| | || |||||| |||||||||||| ||
Sbjct: 79 aaatttttagaataaaacaaatggtcaaacacatactgaaaagttaacggtgtcaaatat 20
Query: 239 ttcgaaacggatggagta 256
|| |||| ||| ||||||
Sbjct: 19 tttgaaatggagggagta 2
>RF01058;MIR806;AAAA02033841.1/62825-63065 39946:Oryza sativa Indica
Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 202/234 (86%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtctta 83
||||||| |||||||||||| |||||||||||||| |||||| ||||| | |||||||||
Sbjct: 9 tccgttttaaaatgtttgac-ccgttgactttttaagtacgtgtttgaccgttcgtctta 67
Query: 84 ttcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatata 143
|| |||||||||||||||||||||| |||||| ||||| | |||||||||||||
Sbjct: 68 tttaaaaaatttaagtaattatttattcttttcatatcatttgactcattgttaaatata 127
Query: 144 ctttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggt 203
||||||||||||||||||||| |||||| ||| |||||| ||||||||||| |||
Sbjct: 128 ctttcatgtacacatatagttaaacatataacat-aaatttaaataataagacgaacggt 186
Query: 204 caaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|||||| || | |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 187 caaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
Score = 97.6 bits (49), Expect = 8e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccgtt 181
Query: 77 cgtcttatt 85
|||||||||
Sbjct: 180 cgtcttatt 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||| ||||||||||| ||||||||| || | |||||||||||||| ||||||||
Sbjct: 79 aaattttttaaataagacgaacggtcaaacacgtacttaaaaagtcaacgg-gtcaaaca 21
Query: 238 tttcgaaacgga 249
||| |||||||
Sbjct: 20 ttttaaaacgga 9
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 192 bits (97), Expect = 2e-48
Identities = 162/185 (87%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||| ||||||||||||| | | |||| ||||||| ||||
Sbjct: 53 ttcgtcttattcaaaaaaattaagtaattattaattattgtcttatcatttgattcattg 112
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaa--ttttttgaata 192
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 113 ttaaatatacttacatgtatacatatagttttacatatttcataaaagtttttttgaata 172
Query: 193 agacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatgg 252
|||| || ||| || |||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 173 agacaaacggttaagcatgtgctaaaaagtcaacggtgtcaaatatttagaaacggaggg 232
Query: 253 agtat 257
|||||
Sbjct: 233 agtat 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 236 tactccctccgtttctaaatatttgacaccgttgactttttag 194
>RF01058;MIR806;AAAA02035408.1/6482-6708 39946:Oryza sativa Indica
Group
Length = 227
Score = 192 bits (97), Expect = 2e-48
Identities = 174/202 (86%)
Strand = Plus / Plus
Query: 38 gtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaa 97
|||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||
Sbjct: 13 gtttgacaccgttgactttttaaaatatatttgaccgttcgtcttattcaaaaaatttaa 72
Query: 98 gtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacaca 157
| ||||||| | |||| | ||||||| ||||||||||||||||| || || |||
Sbjct: 73 gcaattattaattcttttcataccatttgattcattgttaaatatacttttatatataca 132
Query: 158 tatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaa 217
|||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||
Sbjct: 133 tatagttttacatatttcataaaagtttttgaataagacgaacggttaaacatgtttaaa 192
Query: 218 aaagtcaacggtgtcaaacatt 239
||||||||||| ||||||||||
Sbjct: 193 aaagtcaacggcgtcaaacatt 214
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||
Sbjct: 70 aaattttttgaataagacgaacggtcaaatatattttaaaaagtcaacggtgtcaaac 13
>RF01058;MIR806;AAAA02009498.1/6852-7093 39946:Oryza sativa Indica
Group
Length = 242
Score = 190 bits (96), Expect = 7e-48
Identities = 204/241 (84%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||| || || || |||| || ||||||| | |||
Sbjct: 2 tactccctccgtttcgaaatgtttgacgccattaacatttttaaacatatttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||| | | |||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattaattcttttcttatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| |||||| |||||||||||| |||||| |||| ||||||||||
Sbjct: 122 aatatatttttatgtaggcatataattttacatattttataaaaattttcgaataagacg 181
Query: 198 aatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| |||||||||| ||| |||||| |||||||||||||||||||| ||| ||| ||||||
Sbjct: 182 aacggtcaaacatatgcttaaaaaatcaacggtgtcaaacatttcaaaatggagggagta 241
Query: 257 t 257
|
Sbjct: 242 t 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||| |||| |||| || || || |||||||||
Sbjct: 79 aaattttttgaataagacgaacggtcaaatatgtttaaaaatgttaatggcgtcaaacat 20
Query: 239 ttcgaaacggatggagta 256
||||||||||| ||||||
Sbjct: 19 ttcgaaacggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 241 tactccctccattttgaaatgtttgacaccgttgatttttta 200
>RF01058;MIR806;AC133860.5/76754-76494 39947:Oryza sativa Japonica
Group
Length = 261
Score = 190 bits (96), Expect = 7e-48
Identities = 118/124 (95%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 134 gttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataa 193
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 139 gttaaatatactttcatatacacatatagttttacatatttcataaa-ttttttgaataa 197
Query: 194 gacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatgga 253
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 198 gacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 257
Query: 254 gtat 257
||||
Sbjct: 258 gtat 261
Score = 125 bits (63), Expect = 3e-28
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| |||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 260 tactccctccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccattc 201
Query: 78 gtcttattcaaaaaattta 96
|||||||||||||||||||
Sbjct: 200 gtcttattcaaaaaattta 182
Score = 103 bits (52), Expect = 1e-21
Identities = 113/136 (83%), Gaps = 6/136 (4%)
Strand = Plus / Plus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 3 ctccctccgttttaaaatgtttgacaccgttgactttttagtatgtgtttgactgttcg- 61
Query: 80 cttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaa 139
|||||||||||||||||||||||| |||||| ||||||| || ||||||
Sbjct: 62 -----tcaaaaaatttaagtaattatttatttttttcatatcatttgattcatggttaaa 116
Query: 140 tatactttcatgtaca 155
||||||||||| ||||
Sbjct: 117 tatactttcatataca 132
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 43 ctaaaaagtcaacggtgtcaaacattttaaaacggagggag 3
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 190 bits (96), Expect = 7e-48
Identities = 183/213 (85%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||| |||||||||||||||| || | ||| | | |||
Sbjct: 2 tactccctccgtttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||| | | |||| ||||||| ||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattattaatttttttc-tatcatttgattcgttgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| | ||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 121 aatatatttttatgtagatatataattttacatattttataaaagtttttgaataagaca 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtg 230
|| ||| ||||||||||||||||||||||||||
Sbjct: 181 aacggttaaacatgtgctaaaaagtcaacggtg 213
Score = 107 bits (54), Expect = 8e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 79 aaatttttttaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacat 20
Query: 239 ttcgaaacggatggagta 256
|| |||||||| ||||||
Sbjct: 19 tttgaaacggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
|||| |||||||||| ||| ||||||||||||||||| || | ||| | | || |||||
Sbjct: 234 cctctgtttcaaaatatttagcaccgttgactttttagcacatgtttaaccgtttgtctt 175
Query: 83 attcaaaaa 91
|||||||||
Sbjct: 174 attcaaaaa 166
>RF01058;MIR806;AAAA02026229.1/38478-38703 39946:Oryza sativa Indica
Group
Length = 226
Score = 190 bits (96), Expect = 7e-48
Identities = 173/197 (87%), Gaps = 3/197 (1%)
Strand = Plus / Plus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||||||||||| ||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 24 tttttagtacgtgtttgaccattcgtcttattaaaaaaatt-aagtaattatttattatt 82
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| |||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 83 ttcatatcatttgatttattgttaaatatactttcatatatacatatagttttatatatt 142
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtc 232
||| ||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||
Sbjct: 143 tca-caaattttttaaataagacgaacggtcaaacatgtgctaaaaaaatcaacggagtc 201
Query: 233 aaacatttcgaaacgga 249
||| |||| ||||||||
Sbjct: 202 aaatattttgaaacgga 218
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 22 ccctccgtttcaaaatgtttgacaccgttga-ctttttagtacgtatttgatcattcgtc 80
|||||||||||||||| |||||| ||||||| ||||||| || | ||||| | ||||||
Sbjct: 221 ccctccgtttcaaaatatttgactccgttgatttttttagcacatgtttgaccgttcgtc 162
Query: 81 ttattcaaaaaattt 95
||||| |||||||||
Sbjct: 161 ttatttaaaaaattt 147
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaa 220
|||||||| ||||||||||||||||||||| || |||||||
Sbjct: 64 aatttttttaataagacgaatggtcaaacacgtactaaaaa 24
>RF01058;MIR806;AAAA02032598.1/5908-6144 39946:Oryza sativa Indica
Group
Length = 237
Score = 190 bits (96), Expect = 7e-48
Identities = 205/240 (85%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| |||||| |||| |||||| | ||||||||||| | | ||||| |||||
Sbjct: 2 tactcccttcgtttctaaatatttgac-ctgttgacttttttaaatatgtttgaccattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||| ||||||||||||| |||| ||| || |||||||
Sbjct: 61 gtcttattaaaaaaatt-aagtaattatttattttttt--tatcatttaatccattgtta 117
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 118 aatatactttcatgtatacatatagttttacatatttcataaaatttttggaataagacg 177
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| |||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 178 aacggtcaaacatatgctaaaaagtcaacggtatcaaacattcagaaacggagggagtat 237
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||| |||||||||||||||| | | ||||| | |||
Sbjct: 236 tactccctccgtttctgaatgtttgataccgttgactttttagcatatgtttgaccgttc 177
Query: 78 gtcttattcaaaaaattt 95
||||||||| ||||||||
Sbjct: 176 gtcttattccaaaaattt 159
Score = 58.0 bits (29), Expect = 7e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| |||||||||||||||||||||| | ||||||||||| | |||||| |||
Sbjct: 77 aatttttttaataagacgaatggtcaaacatatttaaaaaagtcaacag-gtcaaatatt 19
Query: 240 tcgaaacggatggagta 256
| |||||| | ||||||
Sbjct: 18 tagaaacgaagggagta 2
>RF01058;MIR806;AAAA02003260.1/25355-25115 39946:Oryza sativa Indica
Group
Length = 241
Score = 188 bits (95), Expect = 3e-47
Identities = 192/224 (85%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||| || ||||||||||| ||||| ||||| |||||| |||||||
Sbjct: 62 gtcttattctgaacatttaagtaatcatttattctgtgtatatcagttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||||||||||||| ||||||||||||||||| ||| || |||| |||
Sbjct: 122 aatatattttcatgtacacagttagttttacatatttca-caaacaaattaaatatgaca 180
Query: 198 aatggtcaaaca-tgtgctaaaaagtcaacggtgtcaaacattt 240
|| ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 181 aacggtcaaacactgtgctaaaaagtcaaccgtgtcaaacattt 224
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 188 gaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacg 247
|||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 70 gaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacg 11
Query: 248 gatggagtat 257
|| |||||||
Sbjct: 10 gagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||| |||| |||||||||||||| |||||||||||||
Sbjct: 240 tactccctctgttttaaaatgtttgacacggttgactttttag 198
>RF01058;MIR806;AAAA02019727.1/42626-42864 39946:Oryza sativa Indica
Group
Length = 239
Score = 188 bits (95), Expect = 3e-47
Identities = 178/208 (85%)
Strand = Plus / Plus
Query: 33 aaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
||||||||||||||||||||||||||| | ||||||| | ||||||||||| ||||||
Sbjct: 17 aaaatgtttgacaccgttgactttttaaaaattatttgaccgttcgtcttatttaaaaaa 76
Query: 93 tttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgt 152
||||||||||||| | | || | ||||||||||| ||||||||||||| ||||
Sbjct: 77 attaagtaattattaattcttttcctaccatttgatttattattaaatatacttttatgt 136
Query: 153 acacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgt 212
| ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||
Sbjct: 137 atacatatagttttacacaattcacaaaattttttgaataagacgaatggtcaaacatgt 196
Query: 213 gctaaaaagtcaacggtgtcaaacattt 240
||||||||||||| |||||| ||||
Sbjct: 197 tttaaaaagtcaacgacgtcaaatattt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||| ||||||||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 76 ttttttaaataagacgaacggtcaaataatttttaaaaagtcaacggtgtcaaacattt 18
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
|||| |||||| ||||||||||||| || | ||||| |||||||||||||||||||||
Sbjct: 224 aaatatttgacgtcgttgactttttaaaacatgtttgaccattcgtcttattcaaaaaat 165
Query: 94 tt 95
||
Sbjct: 164 tt 163
>RF01058;MIR806;AAAA02025369.1/9182-8958 39946:Oryza sativa Indica
Group
Length = 225
Score = 188 bits (95), Expect = 3e-47
Identities = 184/216 (85%), Gaps = 16/216 (7%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
||||||||||||||| ||||||||||||||||||||||| | ||||| |||||| |||||
Sbjct: 9 tccgtttcaaaatgtctgacaccgttgactttttagtacctgtttgaccattcgccttat 68
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 69 tcaaaaaatttaagt---------------tcatatcatttgatttattgttaaatatac 113
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
||||||| |||||||||||||||||||||||| ||||||||| |||| |||||| |||
Sbjct: 114 tttcatggacacatatagttttacatatttca-caaatttttttaataggacgaactgtc 172
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||||||| |||||||| ||||
Sbjct: 173 aaacatgtgctaaaaagtcaattgtgtcaaaaattt 208
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 79 aaattttttgaataaggcgaatggtcaaacaggtactaaaaagtcaacggtgtcagacat 20
Query: 239 ttcgaaacggatgga 253
|| ||||||||||||
Sbjct: 19 tttgaaacggatgga 5
>RF01058;MIR806;AP008209.1/33469259-33469499 39947:Oryza sativa
Japonica Group
Length = 241
Score = 188 bits (95), Expect = 3e-47
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 107 tttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaat 166
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||||| ||| ||| ||||||||||||||||| |||||||||||||| |
Sbjct: 167 tttttaaataagacgaacggttaaatatgtgctaaaaagtcaatggtgtcaaacatttag 226
Query: 243 aaacggatggagtat 257
||||||| |||||||
Sbjct: 227 aaacggagggagtat 241
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||||||||||||| |||||||||||| || ||||| | | |||
Sbjct: 240 tactccctccgtttctaaatgtttgacaccattgactttttagcacatatttaaccgttc 181
Query: 78 gtcttattcaaaaaattt 95
|||||||| |||||||||
Sbjct: 180 gtcttatttaaaaaattt 163
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| |||||||||||||||||||||| | ||||| ||||||| |||||| ||||
Sbjct: 76 tttttttaataagacgaatggtcaaacatatttaaaaaaatcaacggcgtcaaatatttg 17
Query: 242 gaaacggatggagtat 257
| ||||||||||||||
Sbjct: 16 ggaacggatggagtat 1
>RF01058;MIR806;AC087552.3/52194-51954 39947:Oryza sativa Japonica
Group
Length = 241
Score = 188 bits (95), Expect = 3e-47
Identities = 204/240 (85%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| ||||||||||| |||||||||||| |||||| |||| || ||||| |||
Sbjct: 2 tactccctacgtttcaaaatatttgacaccgttaacttttcagtatgtgtttgacaattt 61
Query: 78 gtcttattcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||||||||| |||||||||||||||| ||||| ||||||| |||||
Sbjct: 62 gtcttattcaaaaaaatttaagtaattatttattctttttatatcatttgattcgttgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| ||||||||||||||||||| |||||||| || |||||| ||||||||
Sbjct: 122 aaatatacttttatgtacacatatagttttatatatttca-caattttttttaataagac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| ||| ||||||| ||||||||||||||||||||| |||| ||||||| ||||||
Sbjct: 181 gaacagtctaacatgtactaaaaagtcaacggtgtcaagtattttaaaacggagggagta 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||||| ||||| |||||||||||||||||||||||| | || || ||
Sbjct: 241 gtactccctccgttttaaaatacttgacaccgttgactttttagtacatgttagactgtt 182
Query: 77 cgtcttattcaaaaaa 92
||||||||| ||||||
Sbjct: 181 cgtcttattaaaaaaa 166
Score = 65.9 bits (33), Expect = 3e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| ||||||||||||||| ||| |||||||| | || |||||| ||||||||||||
Sbjct: 81 taaatttttttgaataagacaaattgtcaaacacatactgaaaagttaacggtgtcaaat 22
Query: 237 atttcgaaacggatggagtat 257
|||| |||||| | |||||||
Sbjct: 21 attttgaaacgtagggagtat 1
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa Indica
Group
Length = 240
Score = 186 bits (94), Expect = 1e-46
Identities = 202/239 (84%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| |||||| | |||||| |||| | | ||||| ||||
Sbjct: 2 tactccctccgtttctaaatatttgacgctgttgacctttttaaatatgtttgaccattt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||| ||||||||||| | |||||||||||| |||||||
Sbjct: 62 gtcttattaaaaaaatt-aagtaattattattattattcctatcgtttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||| ||| || ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 121 aatatactttcacgtatacttatagttttacatattttataaaagtttttgaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| | ||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 181 aacgttcaaatatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggagta 239
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||| |||||||||||||||||||||||||||||||| || ||||||| | ||
Sbjct: 240 gtactccctccatttcaaaatgtttgacaccgttgactttttagcacatatttgaacgtt 181
Query: 77 cgtcttattcaaaaa 91
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
Score = 58.0 bits (29), Expect = 7e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| |||||||| ||||||||||||| | |||| |||||| | |||||| |||
Sbjct: 78 aatttttttaataagacaaatggtcaaacatatttaaaaaggtcaacagcgtcaaatatt 19
Query: 240 tcgaaacggatggagta 256
| |||||||| ||||||
Sbjct: 18 tagaaacggagggagta 2
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 160/183 (87%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||| ||||||||||||| |||||| ||||||||||||| | | |||| |||
Sbjct: 51 tttgaccattcgtcttattaaaaaaaattaagtaattattaattctttccctatcattta 110
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 111 attcattattaaatatactttcatgtatacatatagttttacatatttcacaaatttttt 170
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 171 t-aataagacaaatggtcaaacatgtgctaaaaagccaacggtgtcaaacatttagaaac 229
Query: 247 gga 249
|||
Sbjct: 230 gga 232
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||||| |||||||||||||||||| |||||||| || | ||||| |||| ||||
Sbjct: 235 ccctccgtttctaaatgtttgacaccgttggctttttagcacatgtttgaccatttgtct 176
Query: 82 tattcaaaaaattt 95
|||| |||||||||
Sbjct: 175 tattaaaaaaattt 162
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacat 210
|||||| ||||||||||||||||||||||
Sbjct: 76 tttttttaataagacgaatggtcaaacat 48
>RF01058;MIR806;AACV01027603.1/5402-5167 39947:Oryza sativa Japonica
Group
Length = 236
Score = 186 bits (94), Expect = 1e-46
Identities = 203/240 (84%), Gaps = 5/240 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2 tactccctcagttacaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||| || ||||||| ||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaattatttatttattctttttatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||||||| | ||||||||||||||||| | |||||||| |||||||||
Sbjct: 122 aatatattttcatg---atgtatagttttacatattt--tgtaatttttttaataagacg 176
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| | |||||| |||| |||||||||||| || || |||||| |||||||| |||||||
Sbjct: 177 aacgatcaaacgtgtgttaaaaagtcaacagtatcgtacattttgaaacggagggagtat 236
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 79 aaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacat 20
Query: 239 ttcgaaacggatggagtat 257
|| | ||| || |||||||
Sbjct: 19 tttgtaactgagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||||| || || |||||||||||| || ||||||| |||
Sbjct: 235 tactccctccgtttcaaaatgtacgatactgttgactttttaacacacgtttgatcgttc 176
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 175 gtcttattaaaaaaatt 159
>RF01062;MIR812;AP008212.1/3897291-3897462 39947:Oryza sativa
Japonica Group
Length = 172
Score = 184 bits (93), Expect = 4e-46
Identities = 153/173 (88%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 172 gactttttagtacatgtttgaccattcgtcttattcaaaaaatttaagtaattatttatt 113
Query: 111 nnnnn-catatcgtttgatttattgttaaatatactttcatgtacacatatagttttaca 169
|||||| ||||||| |||||||||| |||||||| ||||| | |||||||||||
Sbjct: 112 ttttttcatatcatttgattcattgttaaatttactttcacgtacatacatagttttaca 53
Query: 170 tatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagt 222
|||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 52 tatttcat--aatttttttaataagacgaatggtcaaacatgtgctaaaaagt 2
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 128 aaattttttgaataagacgaatggtcaaacatgtactaaaaagtc 172
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 52 actttttagtacgtatttgatcattcgtcttattcaaaaaatt 94
||||||||| || | ||||| ||||||||||||| ||||||||
Sbjct: 2 actttttagcacatgtttgaccattcgtcttattaaaaaaatt 44
>RF01058;MIR806;ABRL01002061.1/457-692 65489:Oryza barthii
Length = 236
Score = 184 bits (93), Expect = 4e-46
Identities = 207/242 (85%), Gaps = 9/242 (3%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgtt-gactttttagtacgtatttgatcatt 76
||||||||||||||||||||||| ||| ||||| ||||||||| |||| ||| | || |
Sbjct: 2 tactccctccgtttcaaaatgtt-gacgccgttagactttttatgacgtgtttaaccagt 60
Query: 77 cgtcttattcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgt 135
||||||||||||||| |||||||||||||||| |||||| ||||||| |||||
Sbjct: 61 tgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcattgt 120
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
||||||||||| |||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 121 taaatatactt----gtacg--tatagttttacatatttcataaattttttttaataaga 174
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
|||| |||||||||||| ||||||||| |||||||||||| |||| |||||||| |||||
Sbjct: 175 cgaacggtcaaacatgtactaaaaagttaacggtgtcaaatattttgaaacggagggagt 234
Query: 256 at 257
||
Sbjct: 235 at 236
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||||||| |||||||||||| | ||||| | |||
Sbjct: 235 tactccctccgtttcaaaatatttgacaccgttaactttttagtacatgtttgaccgttc 176
Query: 78 gtcttattcaaaaaa 92
|||||||| ||||||
Sbjct: 175 gtcttattaaaaaaa 161
Score = 52.0 bits (26), Expect = 4e-06
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc-aacggtgtcaaa 235
|||| ||||||||||||||| | |||| ||||| || ||||||||| ||||| ||| ||
Sbjct: 81 taaatttttttgaataagacaactggttaaacacgtcataaaaagtctaacggcgtc-aa 23
Query: 236 catttcgaaacggatggagtat 257
||||| |||||||| |||||||
Sbjct: 22 cattttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 184 bits (93), Expect = 4e-46
Identities = 176/206 (85%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
||||||||||| ||||||||||||| || | ||||| | ||||||||||| |||||||
Sbjct: 8 aaatgtttgacgccgttgacttttttaaacatgtttgaccgttcgtcttatttaaaaaat 67
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
|||||| ||||| | |||| ||||||| ||||||||||||||||| |||||
Sbjct: 68 ataagtagttattaattctatttctatcatttgattcattgttaaatatacttttatgta 127
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 128 tacatatagttttacatatttcacaaaattttttgaataagacgaatggtcaaacatgtt 187
Query: 214 ctaaaaagtcaacggtgtcaaacatt 239
||||||||||||| ||||||||||
Sbjct: 188 tgaaaaagtcaacggcgtcaaacatt 213
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct: 67 attttttaaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 8
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 35 aatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatt 94
|||||||||| ||||||||||||| || | ||||| ||||||||||||||||||||||
Sbjct: 213 aatgtttgacgccgttgactttttcaaacatgtttgaccattcgtcttattcaaaaaatt 154
Query: 95 t 95
|
Sbjct: 153 t 153
>RF01058;MIR806;AP008209.1/32847449-32847678 39947:Oryza sativa
Japonica Group
Length = 230
Score = 184 bits (93), Expect = 4e-46
Identities = 193/225 (85%), Gaps = 4/225 (1%)
Strand = Plus / Plus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
||||||||||||| || ||| | |||| |||| ||||||| ||||| ||||||||||||
Sbjct: 2 tccgtttcaaaatattcgac--cattgatttttcagtacgtgtttgaccattcgtcttat 59
Query: 85 tcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatac 144
| |||||||| || |||||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 60 taaaaaaattaaa-taattatttattcttttcatatcatttaattcattgttaaatatac 118
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||| |||||||||||||||||||||||||| | |||||| ||||||||||| |||
Sbjct: 119 tttcatatacacatatagttttacatatttcat-attttttttaaataagacgaacggtt 177
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 178 aaacatgtgctaaaaagtcaatggtgtcaaatattttgaaacgga 222
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||||||||| ||||||||| |||||||||||| || | ||| | | |||||||||
Sbjct: 223 ctccgtttcaaaatatttgacaccattgactttttagcacatgtttaaccgttcgtctta 164
Query: 84 ttcaaaaaa 92
|| ||||||
Sbjct: 163 tttaaaaaa 155
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaaca 209
|||||||| |||||||||||||||||||||
Sbjct: 69 aatttttttaataagacgaatggtcaaaca 40
>RF01058;MIR806;AC136787.4/71986-72222 39947:Oryza sativa Japonica
Group
Length = 237
Score = 184 bits (93), Expect = 4e-46
Identities = 195/229 (85%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||||| |||| |||||| ||||||||||||| || | ||||||||||| |||
Sbjct: 6 ccctccgtttctaaatatttgacgccgttgacttttttaaacatgtttgatcattcatct 65
Query: 82 tattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaata 141
|||| |||||| |||||| |||||| | | |||| ||||||| |||||||||||
Sbjct: 66 tattgaaaaaaattaagtgattattaattattttcttatcatttgattcattgttaaata 125
Query: 142 tactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatg 201
|||||||||||| | ||||||||||||||||||| | || ||||| |||||||||||||
Sbjct: 126 tactttcatgtatatatatagttttacatatttc--acaacttttttaataagacgaatg 183
Query: 202 gtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||| |||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 184 gtcaaatatgtacgtaaaaagtcaacggtgtcaaacatttagaaacgga 232
Score = 95.6 bits (48), Expect = 3e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgt 79
|||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttacgtacatatttgaccattcgt 177
Query: 80 cttattcaaaaa 91
|||||| |||||
Sbjct: 176 cttattaaaaaa 165
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||| ||||| |||||||||| ||||||||||||| |||||| ||||
Sbjct: 76 ttttttcaataagatgaatgatcaaacatgtttaaaaaagtcaacggcgtcaaatattta 17
Query: 242 gaaacgga 249
||||||||
Sbjct: 16 gaaacgga 9
>RF01058;MIR806;AAAA02007627.1/1870-2109 39946:Oryza sativa Indica
Group
Length = 240
Score = 184 bits (93), Expect = 4e-46
Identities = 206/242 (85%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||| ||||||||||||||| |||| |||| |||| |||||||||||| ||||| ||||
Sbjct: 1 gtacttcctccgtttcaaaatatttggcaccattgattttttagtacgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||| ||||| ||||||||| ||| |||||||| |||||| ||||||| ||| ||
Sbjct: 61 cgtattatt-aaaaaattttagtgattatttattcttttcatatcatttgattcattatt 119
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 120 aaatatacttttatgtacacatatagttttacatatttca-caaatttttttaataagac 178
Query: 197 gaatggtcaaacatgtg-ctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
|| | | ||||||||| |||||| | |||||||| |||||||| |||||||| |||||
Sbjct: 179 aaacgattaaacatgtgtttaaaaaataaacggtgttaaacattttgaaacggaaggagt 238
Query: 256 at 257
||
Sbjct: 239 at 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
||||||||||| ||||| ||||||||||||||| || ||||||| |||| |||| ||||
Sbjct: 80 taaaatttttt-aataatacgaatggtcaaacacgtactaaaaaatcaatggtgccaaat 22
Query: 237 atttcgaaacgga 249
|||| ||||||||
Sbjct: 21 attttgaaacgga 9
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||| ||||||||||||||||| |||||||| | ||||||
Sbjct: 239 tactccttccgtttcaaaatgtttaacaccgtttatttttta 198
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 184 bits (93), Expect = 4e-46
Identities = 204/241 (84%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| |||| |||||| ||||||||||||| || ||||||||| ||
Sbjct: 2 tactccctccgtttttaaatatttgacgccgttgacttttttaaacatatttgatcgttt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||||||||||| |||||| | | |||| ||||||| ||| | |
Sbjct: 62 gtcttatttaaaaaatttaagtcattattaattcttttcgtatcatttgattcattataa 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 122 aatatactttcatatacacataaagttttacatatttc--aaaatttttttaataagacg 179
Query: 198 aatggtcaaaca-tgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| ||| ||||| ||| ||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 180 aacggttaaacattgtactaaaaagttaacggtgtcaaacattttgaaacggagggagta 239
Query: 257 t 257
|
Sbjct: 240 t 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtac-gtatttgatcatt 76
||||||||||||||||||||||||||||||||| |||||||||||| | ||| | | ||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttaactttttagtacaatgtttaaccgtt 180
Query: 77 cgtcttattcaaaaaattt 95
||||||||| |||||||||
Sbjct: 179 cgtcttattaaaaaaattt 161
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| || | ||||| |||| ||||||||||||| |||||| ||
Sbjct: 79 aaattttttaaataagacaaacgatcaaatatgtttaaaaaagtcaacggcgtcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| ||||||| |||||||
Sbjct: 19 ttaaaaacggagggagtat 1
>RF01058;MIR806;AP008218.1/24274484-24274243 39947:Oryza sativa
Japonica Group
Length = 242
Score = 184 bits (93), Expect = 4e-46
Identities = 158/182 (86%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||| |||||||||||||||||||||||||| | | |||| ||||||| ||||
Sbjct: 60 ttcgtattattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 119
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||||||||| ||||| ||||||||||||| |||||||| |||| |||| |||||||
Sbjct: 120 ttaaatatacttatatgtatacatatagttttagatatttcacaaaagttttcgaataag 179
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||
Sbjct: 180 aggaatggtcaaacatgtgctaaaaagtcaacggtatcaaatatttagaaacggatagag 239
Query: 255 ta 256
||
Sbjct: 240 ta 241
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
|||||||| |||| ||||| |||||||||||||||| || | ||||| ||||| ||||||
Sbjct: 234 tccgtttctaaatatttgataccgttgactttttagcacatgtttgaccattcctcttat 175
Query: 85 tcaaaaa 91
|| ||||
Sbjct: 174 tcgaaaa 168
Score = 56.0 bits (28), Expect = 3e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatg-tgctaaaaagtcaacggtgtcaaaca 237
||||||||||||||| ||||| ||||||||| | |||||||||| |||||||| |
Sbjct: 80 aaattttttgaataatacgaacggtcaaacaaaattaaaaaaagtcaatagtgtcaaata 21
Query: 238 tttcgaaacggatggagtat 257
||| ||||||||||||||||
Sbjct: 20 tttagaaacggatggagtat 1
>RF01058;MIR806;AAAA02007632.1/1496-1239 39946:Oryza sativa Indica
Group
Length = 258
Score = 184 bits (93), Expect = 4e-46
Identities = 166/190 (87%), Gaps = 2/190 (1%)
Strand = Plus / Plus
Query: 61 tacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatat 120
||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 62 tacgtgtttgaccattcgtcttattcaaaaaatttaaataattatttatttttttcatat 121
Query: 121 cgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaa 180
| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 122 catttgattcattgttaaatatactttcatatacacatatggttttacatatttcacaaa 181
Query: 181 attttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatt 239
||||||| ||||||||||| |||||||||| | | |||||||||||| || ||||| |||
Sbjct: 182 atttttt-aataagacgaacggtcaaacatatacttaaaaagtcaacagtatcaaatatt 240
Query: 240 tcgaaacgga 249
| ||||||||
Sbjct: 241 ttgaaacgga 250
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
|||||||||||||||||||||||||||||||
Sbjct: 96 aaattttttgaataagacgaatggtcaaaca 66
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||| |||||||||||||| ||||| || ||||||||||| |||| | ||||| | ||
Sbjct: 257 tactctctccgtttcaaaatatttgatactgttgactttttaagtatatgtttgaccgtt 198
Query: 77 cgtcttattcaaaaa 91
||||||||| |||||
Sbjct: 197 cgtcttattaaaaaa 183
>RF01062;MIR812;AAAA02000693.1/35465-35637 39946:Oryza sativa Indica
Group
Length = 173
Score = 182 bits (92), Expect = 2e-45
Identities = 151/173 (87%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
|||||||||| || | ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 173 gactttttagcacatgtttgaccatttgtcttattcaaaaaatttaagtaattatttatt 114
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 113 ccttttatatcatctgattcattgttaaatatactttcatgtacacatatagttttatat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||| ||| |||||| ||||| ||||||||||||||| |||||||||||||
Sbjct: 53 atttcacaaattttttttaataaaacgaatggtcaaacacgtgctaaaaagtc 1
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 129 aaattttttgaataagacaaatggtcaaacatgtgctaaaaagtc 173
>RF01062;MIR812;CR855113.1/22090-22258 4530:Oryza sativa (rice)
Length = 169
Score = 182 bits (92), Expect = 2e-45
Identities = 151/169 (89%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 55 ttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnn 114
||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 166 ttttagtacgtgtttgaccattcgtcttattcaaaaa-tttaagtaattatttattcttt 108
Query: 115 ncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatattt 174
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 107 tcatatcatttgattcattgttaaatatactt-catgtacacatatagttttacatattt 49
Query: 175 cataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|| ||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 48 ca-caaatttttttaataagatgaacggtcaaacatgtgctaaaaagtc 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaa 219
||||||||||||||||||||||||||| || ||||||
Sbjct: 130 tttttgaataagacgaatggtcaaacacgtactaaaa 166
>RF01058;MIR806;AAAA02034417.1/5267-5034 39946:Oryza sativa Indica
Group
Length = 234
Score = 182 bits (92), Expect = 2e-45
Identities = 117/124 (94%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 117 atatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttca 176
||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 96 atatcatttgattcattgttaaatatacttttatgtacacatatagttttacatatttta 155
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 156 taaattttttt-aataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaac 214
Query: 237 attt 240
||||
Sbjct: 215 attt 218
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||| |||||||||||||||||||||||||||| || | ||||| | |||||||||||
Sbjct: 226 ccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 167
Query: 86 caaaaaattta 96
||||||||||
Sbjct: 166 aaaaaaattta 156
Score = 50.1 bits (25), Expect = 2e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 189 aataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 240
||||||||||||||||||||| || || ||||| |||||| ||| ||||||||
Sbjct: 80 aataagacgaatggtcaaacacgtactaaaaaaatcaacgatgttaaacattt 28
>RF01058;MIR806;AC092389.4/56062-56303 39947:Oryza sativa Japonica
Group
Length = 242
Score = 182 bits (92), Expect = 2e-45
Identities = 200/237 (84%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| || ||| |||||| ||||||| | | ||||| | |||
Sbjct: 2 tactccctccgtttctaaatattcgacgccgttgtctttttaaaatatgtttgaccgttc 61
Query: 78 gtcttattcaa-aaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||||| ||||||||| |||||||| | | |||| ||||||||||||||
Sbjct: 62 gtcttattcaacaaaatttaactaattattaatttttttcctatcatttgatttattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||| ||||| |||||||||||||||||||||| |||| |||||||||||
Sbjct: 122 aaatatacttatatgtatacatatagttttacatatttcaaaaaaaaaattgaataagac 181
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatgga 253
| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 182 aagcggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacggatgga 238
Score = 65.9 bits (33), Expect = 3e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| ||| |||||||||||||| |||||||||| | ||||||| |||||| ||| ||
Sbjct: 81 taaattttgttgaataagacgaacggtcaaacatattttaaaaagacaacggcgtcgaat 22
Query: 237 atttcgaaacggatggagtat 257
|||| |||||||| |||||||
Sbjct: 21 atttagaaacggagggagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||| |||| ||||||||||||||||||||||
Sbjct: 234 tccgtttctaaatatttgacaccgttgactttttag 199
>RF01058;MIR806;AP003509.3/79102-78866 39947:Oryza sativa Japonica
Group
Length = 237
Score = 182 bits (92), Expect = 2e-45
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 98 tatcgtttgattcattgttaaatatacgttcatgtatacatatagttttacatatttcac 157
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||||||||||||||||||||| | |||||||| ||| |||||||||| | |||||||||
Sbjct: 158 aaaattttttgaataagacgaacgatcaaacatatgcgaaaaagtcaatgatgtcaaaca 217
Query: 238 tttcgaaacggatggagtat 257
||| |||||||| |||||||
Sbjct: 218 tttagaaacggaaggagtat 237
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| |||||||||||| | |||||||||| | | | ||||||| |||
Sbjct: 236 tactccttccgtttctaaatgtttgacatcattgactttttcgcatatgtttgatcgttc 177
Query: 78 gtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 176 gtcttattcaaaaaattt 159
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 182 bits (92), Expect = 2e-45
Identities = 192/225 (85%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtatttgatcatt 76
|||||||||| ||| |||||||||||||||||| |||||| | ||||| | ||| ||||
Sbjct: 2 tactccctccattttaaaatgtttgacaccgttaacttttaaaatacgtgtgtgaccatt 61
Query: 77 cgtcttattcaaaaaattta-agtaattatttannnnnnncatatcgtttgatttattgt 135
||||||||| ||||||||| |||||||||||| |||||| ||||||| |||||
Sbjct: 62 cgtcttattaaaaaaattttgagtaattatttattcttttcatatcatttgattcattgt 121
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||| ||||||| | ||||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 122 taaatatattttcatgcatacatatagttttatatatttcacagattttttttaataata 181
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 182 cgaacggtcaaacatgtgttaaaaagtcaacggtgttaaacattt 226
Score = 58.0 bits (29), Expect = 7e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 178 aaaattttttgaataagacgaatggtcaaacatgt-gctaaaaagtcaacggtgtcaaac 236
|||||||||| ||||||||||||||||| ||| || | |||||| |||||||||||||
Sbjct: 81 aaaatttttttaataagacgaatggtcacacacgtattttaaaagttaacggtgtcaaac 22
Query: 237 atttcgaaacggatggagtat 257
|||| ||| ||| |||||||
Sbjct: 21 attttaaaatggagggagtat 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaa-tgtttgacaccgttgactttttagtacgtatttgatcat 75
|||| ||||||||||||||| ||||| ||||||||||||||||| || | ||||| | |
Sbjct: 244 gtacaccctccgtttcaaaaatgtttaacaccgttgactttttaacacatgtttgaccgt 185
Query: 76 tcgtcttattcaaaaaa 92
|||| ||||| ||||||
Sbjct: 184 tcgtattattaaaaaaa 168
>RF01058;MIR806;AP005604.3/116542-116319 39947:Oryza sativa Japonica
Group
Length = 224
Score = 182 bits (92), Expect = 2e-45
Identities = 194/231 (83%), Gaps = 17/231 (7%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| |||||||||| |||||||||||||||||||||||| || ||||| ||||
Sbjct: 2 tactccctctgtttcaaaatatttgacaccgttgactttttagtatgtgtttgacaattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||| || || |||||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaaatttag---------------gtcatatcatttgattcattgtta 106
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||||||||||||||||||| ||||||| | |||||| |||||| |
Sbjct: 107 aatatactttcatgtacacatatagttttacacatttcat--attttttttaataaggtg 164
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 248
|| ||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 165 aacggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 215
Score = 89.7 bits (45), Expect = 2e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct: 81 taaatttttttgaataagacgaattgtcaaacacatactaaaaagtcaacggtgtcaaat 22
Query: 237 atttcgaaacggatggagtat 257
|||| ||||| || |||||||
Sbjct: 21 attttgaaacagagggagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
||||||||||||||||||||||||||||||||||| |||| ||||| | ||| ||||||
Sbjct: 215 ccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcaccttatt 156
Query: 86 caaaaaa 92
||||||
Sbjct: 155 aaaaaaa 149
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 182 bits (92), Expect = 2e-45
Identities = 207/243 (85%), Gaps = 6/243 (2%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||| ||||||||||| |||| |||||| | ||||||||||| || | ||||||||||
Sbjct: 1 gtaccccctccgtttctaaatatttgacgctgttgacttttttaaacatgtttgatcatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatt-tannnnnnncatatcgtttgatttattgt 135
||||||||| ||||| ||||||||||||| || | |||| ||||||| |||||
Sbjct: 61 cgtcttattaaaaaa--ttaagtaattattatatttttttcctatcatttgattcattgt 118
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||| ||||||||| |||||||||||||||||| || |||| ||||| |||||||
Sbjct: 119 taaatatattttcatgtatacatatagttttacatatatc--aaaaatttttaaataaga 176
Query: 196 cgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||| |||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 177 cgaaaggtcaaacatgtgcttaaaaagtcaacggtgtcaaatatttagaaacggagggag 236
Query: 255 tat 257
|||
Sbjct: 237 tat 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||||||||||||| |||| |||||||||||||||||||| || || | ||||| | ||
Sbjct: 238 tactccctccgtttctaaatatttgacaccgttgactttttaagcacatgtttgaccttt 179
Query: 77 cgtcttattcaaaaa 91
||||||||| |||||
Sbjct: 178 cgtcttatttaaaaa 164
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||||||| |||||||||| ||||||||||| | |||||| |||| |
Sbjct: 75 ttttttaataagacgaatgatcaaacatgtttaaaaaagtcaacagcgtcaaatatttag 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AP008207.1/4618665-4618903 39947:Oryza sativa
Japonica Group
Length = 239
Score = 182 bits (92), Expect = 2e-45
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 105 tttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaaa 164
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |
Sbjct: 165 attttgaataagacaaatggtcaaacatgtggtaaaaagtcaacagtgtcaaacatttag 224
Query: 243 aaacggatggag 254
||||||| ||||
Sbjct: 225 aaacggagggag 236
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
||||||||||||| ||||||||||||| |||||||||||| || | ||||| |||| ||
Sbjct: 236 ctccctccgtttctaaatgtttgacactgttgactttttaccacatgtttgaccatttgt 177
Query: 80 cttattcaaaa 90
|||||||||||
Sbjct: 176 cttattcaaaa 166
>RF01058;MIR806;AP008214.1/6309436-6309676 39947:Oryza sativa
Japonica Group
Length = 241
Score = 182 bits (92), Expect = 2e-45
Identities = 198/233 (84%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| ||||||||||||| ||||||||||| || | ||| | |||||
Sbjct: 2 tactccatccgtttcgaaatgtttgacactattgactttttattatatgtttaaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||| |||||||| ||||||||||| | |||| ||||||| |||||||
Sbjct: 62 atcttattaaaaaaatt-aagtaattattaattatttttctatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 121 aatatatttttatgtatacatatagttttatatatttcacaaaattttttgaataagacg 180
Query: 198 aatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttcgaaacgga 249
|| |||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 181 aacagtcaaacatgtgctaaaaaaatcaacggtatcaaacatttcgaaacgga 233
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||||| ||||||| |||||| | ||||||||||| ||||||||||||
Sbjct: 78 aatttttttaataagatgaatggttaaacatataataaaaagtcaatagtgtcaaacatt 19
Query: 240 tcgaaacggatggagtat 257
||||||||||||||||||
Sbjct: 18 tcgaaacggatggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcatt 76
||||| ||||||||| |||||||||| |||||||| ||||| || || | ||||| ||
Sbjct: 240 tactcactccgtttcgaaatgtttgataccgttgatttttttagcacatgtttgactgtt 181
Query: 77 cgtcttattcaaaaaattt 95
|||||||||||||||||||
Sbjct: 180 cgtcttattcaaaaaattt 162
>RF01058;MIR806;AAAA02035408.1/5345-5101 39946:Oryza sativa Indica
Group
Length = 245
Score = 180 bits (91), Expect = 7e-45
Identities = 199/235 (84%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||||||||||||| ||| |||| |||||||||||||||| |||||| ||||
Sbjct: 2 tactccatccgtttcaaaatatttaacactattgactttttagtacggatttgactattc 61
Query: 78 gtcttattcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||| |||||| |||||||||||||||| |||||| ||||||||||||||
Sbjct: 62 atcttattaaaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatattt--cataaaattttttgaataag 194
|||||||||||| ||||||| ||||||||||||||||| || |||| ||||||| |||
Sbjct: 122 aaatatactttcgtgtacacctatagttttacatatttcacaaaaaaaattttgaaaaag 181
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||| | |||||||| | ||||||| || |||||||||||||| ||||||||
Sbjct: 182 acgaacgatcaaacatatatcaaaaagttaatggtgtcaaacattttgaaacgga 236
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||||||||||||||||||||||| || ||||||| || | ||||||| ||||||||
Sbjct: 238 cctccgtttcaaaatgtttgacaccattaactttttgatatatgtttgatcgttcgtctt 179
Query: 83 attcaaaa 90
|||||||
Sbjct: 178 tttcaaaa 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| |||||| ||||||| |||| |||||| || |||||||||||| |||| |||
Sbjct: 81 taaattttttttaataagatgaatagtcaaatccgtactaaaaagtcaatagtgttaaat 22
Query: 237 atttcgaaacggatggagta 256
|||| |||||||||||||||
Sbjct: 21 attttgaaacggatggagta 2
>RF01058;MIR806;AL606588.4/5999-5762 4530:Oryza sativa (rice)
Length = 238
Score = 180 bits (91), Expect = 7e-45
Identities = 201/235 (85%), Gaps = 5/235 (2%)
Strand = Plus / Plus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||||||||||||||||||| | |||| ||||||| ||||| |||| ||||||
Sbjct: 8 ctccgtttcaaaatgtttgacaccacttt-ttttaagtacgtgtttgaccatttgtctta 66
Query: 84 ttcaaaaaatt-taagtaattatttannnnnnncatatcgtttgatttattgttaaatat 142
|| |||||| |||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 67 tttaaaaaaaactaagtaattatttattttttt-atattatttgattcattgttaaatat 125
Query: 143 actttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatgg 202
||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| ||
Sbjct: 126 actttcatgtacacatatagttttatatatttcacaa--tttttttaataagacgaacgg 183
Query: 203 tcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|||||||| |||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 184 tcaaacatatgctaaaaagtcaacggtgtcaaatattttgaaacggagggagtat 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||||||||| |||||||||||||||||||||| | | ||||| | |||
Sbjct: 237 tactccctccgtttcaaaatatttgacaccgttgactttttagcatatgtttgaccgttc 178
Query: 78 gtcttattcaaaaaatt 94
|||||||| ||||||||
Sbjct: 177 gtcttattaaaaaaatt 161
>RF01058;MIR806;AC135644.2/3714-3474 39947:Oryza sativa Japonica
Group
Length = 241
Score = 180 bits (91), Expect = 7e-45
Identities = 186/220 (84%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
|||| |||||| | ||||||||||| || ||||| | |||||||||||||||||||||
Sbjct: 18 aaatatttgacgctgttgacttttttaaacatatttaaccattcgtcttattcaaaaaat 77
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
|||| ||||| || | |||||||||||| ||| ||||||||| ||| |||||
Sbjct: 78 ttaaataatttttagttcttttcctatcgtttgattcattcttaaatatatttttatgta 137
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 138 tacatatagttttacatatttcacaaaagtttttgaataagacgaatggtcaaacatgtg 197
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaacggatgga 253
|||||||||||||| |||||| |||| | |||||||||
Sbjct: 198 ttaaaaagtcaacggcgtcaaatatttagggacggatgga 237
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||||| ||| |||| ||||||||||| | |||||| ||
Sbjct: 79 aaattttttgaataagacgaatggttaaatatgtttaaaaaagtcaacagcgtcaaatat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
|||| |||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 224 aaatatttgacgccgttgactttttaacacatgtttgaccattcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 180 bits (91), Expect = 7e-45
Identities = 165/192 (85%)
Strand = Plus / Plus
Query: 65 tatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtt 124
||||||| |||| ||||||||||||||||||||||||||||| | | |||| ||
Sbjct: 49 tatttgaccatttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 108
Query: 125 tgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattt 184
||||| |||||||||||||||| ||||| || |||||||||||||||| || |||| ||
Sbjct: 109 tgattcattgttaaatatacttatatgtatacgtatagttttacatattccacaaaaatt 168
Query: 185 tttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaa 244
||||||||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||
Sbjct: 169 tttgaataagacgaacggtcaaatatgtggtaaaaagttaacggtgtcaaatatttagaa 228
Query: 245 acggatggagta 256
||||| ||||||
Sbjct: 229 acggagggagta 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| |||||||||||| |||||||| || ||||||| | |||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttaccacatatttgaccgttc 181
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaa 207
|||||||||||||||||| ||||||||||
Sbjct: 79 aaattttttgaataagacaaatggtcaaa 51
>RF01058;MIR806;AACV01004856.1/662-425 39947:Oryza sativa Japonica
Group
Length = 238
Score = 180 bits (91), Expect = 7e-45
Identities = 171/196 (87%), Gaps = 3/196 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| |||| |||||| |||||||||||||| || | ||||| |||||
Sbjct: 2 tactccatccgtttctaaatatttgacgccgttgactttttaa-acatgtttgaccattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||| ||||||||||||| | | |||| |||||||||||||||
Sbjct: 61 gtcttatt-aaaaaagttaagtaattatt-atttttttcctatcatttgatttattgtta 118
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aatatatttttatgtatacatatagttttacatatttcataaaattttttgaataagacg 178
Query: 198 aatggtcaaacatgtg 213
|| |||||||||||||
Sbjct: 179 aacggtcaaacatgtg 194
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| |
Sbjct: 74 ttttttaataagacgaatggtcaaacatgtt-taaaaagtcaacggcgtcaaatatttag 16
Query: 243 aaacggatggagtat 257
|||||||||||||||
Sbjct: 15 aaacggatggagtat 1
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 180 bits (91), Expect = 7e-45
Identities = 196/232 (84%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| || || ||||||||||||| || | ||||| | |||
Sbjct: 2 tactccctccgtttctaaatattcgatgccgttgacttttttaaacatgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||| ||||| ||| |||| | | |||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaattttaaataagtatt-atttttttcctatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||| ||||| ||||||||||||| |||||||| |||| ||||||||||||| |
Sbjct: 121 aatatacttttatgtatacatatagttttatatatttcacaaaaatttttgaataagatg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||||||||||||||||| |||||||| ||| |||| ||||||||
Sbjct: 181 aatggtcaaacatgtgctaaaaagttaacggtgtaaaatatttagaaacgga 232
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||| |||||||||||| ||||||||||||| || || |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcgaatatttag 16
Query: 243 aaacggatggagtat 257
||||||| |||||||
Sbjct: 15 aaacggagggagtat 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| |||||||||| |||| ||| |||||||| ||||||||| || | ||||| |||||
Sbjct: 239 tacttcctccgtttctaaatattttacaccgttaactttttagcacatgtttgaccattc 180
Query: 78 gtcttattcaaaaa 91
|||||||||||||
Sbjct: 179 atcttattcaaaaa 166
>RF01058;MIR806;AACV01017341.1/5880-5641 39947:Oryza sativa Japonica
Group
Length = 240
Score = 180 bits (91), Expect = 7e-45
Identities = 202/240 (84%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| || | |||| |||| | ||||||| ||||| || | ||| |||||||
Sbjct: 2 tactccctccattcctaaatatttggcgccgttgatttttttaaacatgtttaatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattaattctttttctatcatttgatttattgttg 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||| | |||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 122 aatatactttcatgtatatatatagttttgcatatttcat-aaatttttttaataagacg 180
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||| || ||| |||| || |||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 181 aatagttaaatatgtactgaaaagttaacggtgtcaaacatttagaaacggagggagtat 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||||||||| |||||| ||||| ||||| | ||||
Sbjct: 239 tactccctccgtttctaaatgtttgacaccgttaacttttcagtacatatttaactattc 180
Query: 78 gtcttattcaaaaaattta 96
|||||||| ||||||||||
Sbjct: 179 gtcttattaaaaaaattta 161
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||||| | |||||||| ||||| ||||||| | |||| ||
Sbjct: 79 aaattttttgaataagacgaatgattaaacatgtttaaaaaaatcaacggcgccaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| | || ||| |||||||
Sbjct: 19 ttaggaatggagggagtat 1
>RF01062;MIR812;AP008207.1/12546112-12545941 39947:Oryza sativa
Japonica Group
Length = 172
Score = 178 bits (90), Expect = 3e-44
Identities = 146/167 (87%)
Strand = Plus / Minus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||| ||||||| ||||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 170 ttttaagtacgtgtttgaccattcgtcttattaaaaaaatttaggtaattatttattctt 111
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 110 ttcatatcatttgattcattgttaaatacacttttatgtacacatatagttttacatatt 51
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaa 220
||| ||| |||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 50 tcacaaattttttttaataagacgaacggtcaaacatgcgctaaaaa 4
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
||||||||| |||||||||||||||||||||
Sbjct: 129 aaatttttttaataagacgaatggtcaaaca 159
>RF01058;MIR806;AAAA02006649.1/21379-21617 39946:Oryza sativa Indica
Group
Length = 239
Score = 178 bits (90), Expect = 3e-44
Identities = 205/241 (85%), Gaps = 6/241 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| ||| |||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 2 tactccctccattttaaaatgtttgacaccgttaacttttta-tacgtgtttgaccattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| ||||| |||||| | || ||||||||| |||||| ||| |||||||||||
Sbjct: 61 gttttatttaaaaaaatcaaataattatttgttcttttcatatcatttaatttattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaata--aga 195
|||||||||| ||||||||||| ||||||||||||| | || ||||||||||| |||
Sbjct: 121 aatatacttttatgtacacata--gttttacatattttacaat-ttttttgaatataaga 177
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
| || ||| |||||||||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 178 caaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggagt 237
Query: 256 a 256
|
Sbjct: 238 a 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 239 gtactccctccatttcaaaatgtttgacaccgttgactttttag 196
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||| ||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 75 ttttttaaataaaacgaatggtcaaacacgta-taaaaagttaacggtgtcaaacatttt 17
Query: 242 gaaacggatggagtat 257
||| ||| |||||||
Sbjct: 16 aaaatggagggagtat 1
>RF01058;MIR806;AAAA02003225.1/20808-21050 39946:Oryza sativa Indica
Group
Length = 243
Score = 178 bits (90), Expect = 3e-44
Identities = 182/211 (86%), Gaps = 3/211 (1%)
Strand = Plus / Plus
Query: 28 gtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattc 86
|||| |||||| ||||| ||||| | |||||| |||||| |||||||||||||||||||
Sbjct: 12 gttttaaaatggttgacgccgttaattttttaagtacgtgtttgatcattcgtcttatta 71
Query: 87 aaaaaat-ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
|||||| ||||||||||||||| |||| ||||||| |||||||||||||||
Sbjct: 72 aaaaaaaattaagtaattatttattctttttatattatttgattcattgttaaatatact 131
Query: 146 ttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtca 205
||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||| ||| |
Sbjct: 132 ttcatgtgcacatatagttttacatatttca-caaatttttttaataagatgaacggtta 190
Query: 206 aacatgtgctaaaaagtcaacggtgtcaaac 236
||||||||||||||||| |||||||||||||
Sbjct: 191 aacatgtgctaaaaagttaacggtgtcaaac 221
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatg-tttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||| |||||| |||||||||||| ||||||||| || | ||| | | ||| |||
Sbjct: 237 cctccgttttaaaatggtttgacaccgttaactttttagcacatgtttaaccgttcatct 178
Query: 82 tattcaaaaaattt 95
|||| |||||||||
Sbjct: 177 tattaaaaaaattt 164
>RF01058;MIR806;AAAA02031464.1/18598-18832 39946:Oryza sativa Indica
Group
Length = 235
Score = 178 bits (90), Expect = 3e-44
Identities = 158/183 (86%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||||||||| |||||||||||||||||||| | ||||| ||||||| ||||
Sbjct: 53 ttcgtcttatttaaaaaatttaagtaattattaattattcttatatcatttgattcattg 112
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||||||||| ||| ||||| |||||| ||||| |||| |||||||| ||||||||||||
Sbjct: 113 ttaaatatatttttatgtaggcatataattttatatatctcataaaagtttttgaataag 172
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 173 acgaacagtcaaaaatgtgctaaaaagtcaacggtgtcaaacatttcgaaatggagggag 232
Query: 255 tat 257
|||
Sbjct: 233 tat 235
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| |||| ||||||||||||||||||||||||||| || | ||||| |||
Sbjct: 234 tactccctccatttcgaaatgtttgacaccgttgactttttagcacatttttgactgttc 175
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 174 gtcttattcaaaaa 161
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacg 227
||||||||| ||||||||||| | | |||||| || |||||||||||||
Sbjct: 73 aaattttttaaataagacgaacgataaaacatttgataaaaagtcaacg 25
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 178 bits (90), Expect = 3e-44
Identities = 198/235 (84%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||| |||| |||| |||||||||||||| |||||| | ||||||| || |||||
Sbjct: 7 cctccatttctaaatatttgacaccgttgattttttaaaatatatttgactgtttgtctt 66
Query: 83 attcaaaaaa-tttaagtaattatttannnnnnncatatcgtttgatttattgttaaata 141
||| |||||| |||||||||||||| | | |||| ||||||| ||||| |||||
Sbjct: 67 attaaaaaaaatttaagtaattattaattattttcctatcatttgattcattgtgaaata 126
Query: 142 tactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatg 201
||||| ||| | |||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct: 127 tacttatatgcatacatatagttttacatatttcacaaaagtttttaaataagacgaatg 186
Query: 202 gtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||
Sbjct: 187 gtcaaacatgtgctaaaaagttaacggtgtcaaatatttagaaacggagggagta 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| |||||||||||| ||||||||| || | ||||| |||||
Sbjct: 241 tactccctccgtttctaaatatttgacaccgttaactttttagcacatgtttgaccattc 182
Query: 78 gtcttattcaaaaa 91
|||||||| |||||
Sbjct: 181 gtcttatttaaaaa 168
>RF01058;MIR806;AC120307.3/45731-45972 39947:Oryza sativa Japonica
Group
Length = 242
Score = 178 bits (90), Expect = 3e-44
Identities = 201/239 (84%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagt-acgtatttgatcattcg 78
||||||||||| | |||| ||||||||||||||||||||| || ||||| | | ||||
Sbjct: 4 ctccctccgttactaaatatttgacaccgttgactttttaaacacatatttaaccgttcg 63
Query: 79 tcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||||||||| |||||||||||||| | ||| ||| ||||||||||||
Sbjct: 64 tcttattcaaaacgtttaagtaattattaattctttttctattatttaatttattgttaa 123
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
|||||||| ||||| ||| ||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 124 atatacttatatgtatacaaataattttacatattttataaaatcttttgaataagacga 183
Query: 199 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
| ||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||
Sbjct: 184 acggtcaaatatgtgctaaaaagtcaacgatgtcaaatatttagaaacggagggagtat 242
Score = 91.7 bits (46), Expect = 5e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| ||||||| |||||||||||||| || ||||||| | |||
Sbjct: 241 tactccctccgtttctaaatatttgacatcgttgactttttagcacatatttgaccgttc 182
Query: 78 gtcttattcaaaaaattt 95
||||||||||||| ||||
Sbjct: 181 gtcttattcaaaagattt 164
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 184 ttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttcg 242
|||||||||||||||| ||| ||| ||||| | |||||||||||||||||||| |||| |
Sbjct: 75 ttttgaataagacgaacggttaaatatgtgtttaaaaagtcaacggtgtcaaatatttag 16
Query: 243 aaacggatggag 254
|||||| ||||
Sbjct: 15 taacggagggag 4
>RF01058;MIR806;AL731600.3/124104-123868 39947:Oryza sativa Japonica
Group
Length = 237
Score = 178 bits (90), Expect = 3e-44
Identities = 187/220 (85%), Gaps = 5/220 (2%)
Strand = Plus / Plus
Query: 19 actccctccgtttcaaaatgtttgacaccgttgacttttt---agtacgtatttgatcat 75
|||||||||||||| |||| |||||| ||||||||||||| | || ||||||| ||
Sbjct: 1 actccctccgtttctaaatatttgacgccgttgactttttttaaata--tatttgactat 58
Query: 76 tcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgt 135
|||| |||||||||||||||||||||||||| | | |||| ||||||| | |||
Sbjct: 59 tcgttttattcaaaaaatttaagtaattattaatttgttccctatcatttgattcactgt 118
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
||||||||||| ||||| ||||||||||||| |||||||| |||| ||||| |||||||
Sbjct: 119 taaatatacttatatgtatacatatagttttatatatttcacaaaagtttttaaataaga 178
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||||||||||||||| |||||||||||||||||||||
Sbjct: 179 tgaatggtcaaacatgtgttaaaaagtcaacggtgtcaaa 218
Score = 52.0 bits (26), Expect = 4e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacat-gtgctaaaaagtcaacggtgtcaaaca 237
||||||||||||||| |||||| |||||| || | ||||||||||||| |||||| |
Sbjct: 78 aaattttttgaataaaacgaatagtcaaatatatttaaaaaaagtcaacggcgtcaaata 19
Query: 238 tttcgaaacggatggagt 255
||| |||||||| |||||
Sbjct: 18 tttagaaacggagggagt 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 39 tttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||||||||||||||| || | ||||| ||||| ||||||| |||||
Sbjct: 218 tttgacaccgttgactttttaacacatgtttgaccattcatcttatttaaaaa 166
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 178 bits (90), Expect = 3e-44
Identities = 149/171 (87%)
Strand = Plus / Plus
Query: 79 tcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||||||||||||||||||||||||| | |||| ||||||| ||||||||
Sbjct: 63 tcttattcaaaaaatttaagtaattattaattctttttctatcatttgattcattgttaa 122
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||||||||| ||||| |||| ||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 123 atatacttttatgtatacatgtagttttacatatttcacaaaagtttttaaataagacga 182
Query: 199 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||||| ||||||||||||||||||| ||| |||| ||||||||
Sbjct: 183 atggtcaaacatgagctaaaaagtcaacggtgttaaatatttagaaacgga 233
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||||| |||| ||| |||||||||||||||||| | | ||||| |||||||||
Sbjct: 236 ccctccgtttctaaatatttaacaccgttgactttttagctcatgtttgaccattcgtct 177
Query: 82 tattcaaaaa 91
|||| |||||
Sbjct: 176 tatttaaaaa 167
>RF01062;MIR812;AACV01006600.1/44361-44190 39947:Oryza sativa
Japonica Group
Length = 172
Score = 176 bits (89), Expect = 1e-43
Identities = 152/173 (87%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttatttaaaaaatttaagtaattatttatt 113
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
||||| ||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 112 ctttttatatcatttgattcattgttaaatatactttcgtgtacacata--gttttacat 55
Query: 171 atttcataaaattttttgaa-taagacgaatggtcaaacatgtgctaaaaagt 222
|||||| ||| |||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 54 atttcacaaactttttttaaataagacgaacggtcaaacatgtgctaaaaagt 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct: 128 aaattttttaaataagacgaatggtcaaacacgtactaaaaagtc 172
>RF01058;MIR806;AAAA02007519.1/45475-45716 39946:Oryza sativa Indica
Group
Length = 242
Score = 176 bits (89), Expect = 1e-43
Identities = 139/158 (87%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| | ||||||||| |||||||||||||| ||||||||| || |||||||||||
Sbjct: 2 tactcccttcatttcaaaatatttgacaccgttgattttttagtatgtgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||||||||| || ||||||| |||||| |||||||||||||||
Sbjct: 62 gtcttatttaaaaaatttaattatttatttattcttttcatatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttc 175
||||||||||||||| ||| ||||||||||||||||||
Sbjct: 122 aatatactttcatgtgcacgtatagttttacatatttc 159
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||||| ||
Sbjct: 79 aaattttttaaataagacgaatgatcaaacacatactaaaaaatcaacggtgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 tttgaaa 13
>RF01058;MIR806;ABRL01000517.1/8497-8737 65489:Oryza barthii
Length = 241
Score = 176 bits (89), Expect = 1e-43
Identities = 195/230 (84%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
||||||||||||| ||||||||| | |||| ||||||||| || | ||||| | |||||
Sbjct: 4 ctccctccgtttcgaaatgtttggcgtcgttaactttttagcacatgtttgaccgttcgt 63
Query: 80 cttattcaaaaaattt-aagtaattatttannnnnnncatatcgtttgatttattgttaa 138
|||||||||||| ||| ||||||||||| | |||||| ||||||| ||| ||||
Sbjct: 64 cttattcaaaaacttttaagtaattatt-atttttttcatatcatttgattcattattaa 122
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||||| ||| ||||| |||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 123 atatatttttatgtaggcatataattttacatatttcataaaaggttttgaataagacga 182
Query: 199 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 248
| |||||||||||||||||||| ||||| | || ||||||||||||||||
Sbjct: 183 acggtcaaacatgtgctaaaaaatcaacagcgttaaacatttcgaaacgg 232
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 177 taaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaac 236
||||| ||||||||||||||||| |||||||||||||||||||||| |||| | |||||
Sbjct: 81 taaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagttaacgacgccaaac 22
Query: 237 atttcgaaacggatggag 254
||||||||||||| ||||
Sbjct: 21 atttcgaaacggagggag 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
||||||| |||||||| || | ||||| ||||||| || | ||||| | |||||||||||
Sbjct: 232 ccgtttcgaaatgtttaacgctgttgattttttagcacatgtttgaccgttcgtcttatt 173
Query: 86 caaaa 90
|||||
Sbjct: 172 caaaa 168
>RF01058;MIR806;AACV01022578.1/12222-12463 39947:Oryza sativa
Japonica Group
Length = 242
Score = 176 bits (89), Expect = 1e-43
Identities = 188/221 (85%), Gaps = 3/221 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||| |||| |||||| ||||||||||||| | |||||| ||||||
Sbjct: 2 tactccctc-gtttctaaatatttgacgccgttgacttttttaaatatatttggtcattc 60
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| ||||| ||||||||||||| | | |||| ||||||| |||||||
Sbjct: 61 gtcttattaaaaaa--ttaagtaattattaatttttttcttatcatttgattcattgtta 118
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 119 aatatactttcatgtatacatatagttttacatattacacaaatttttttgaataagacg 178
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|| ||||||| ||||| ||||||||||||||| | ||||||
Sbjct: 179 aacggtcaaatatgtgttaaaaagtcaacggtattaaacat 219
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 36 atgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaa 92
|||||| | ||||||||||||||| || ||||||| | ||||||||||||||||||
Sbjct: 219 atgtttaataccgttgactttttaacacatatttgaccgttcgtcttattcaaaaaa 163
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 176 bits (89), Expect = 1e-43
Identities = 158/182 (86%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||||||||| |||||||||||||||||||| | |||||| ||||||| ||||
Sbjct: 59 ttcgtcttatttaaaaaatttaagtaattattaattcttttcatatcatttgattcattg 118
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||||||||| ||||| ||||||||||||||||||||| |||| |||| ||||||
Sbjct: 119 ttaaatatacttatatgtatgcatatagttttacatatttcacaaaaatttt-gaataaa 177
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||
Sbjct: 178 acgaatggtcaaacatgtgctaaaaagttgacggtgtcaaatatttagaaacggagggag 237
Query: 255 ta 256
||
Sbjct: 238 ta 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| ||||||||||| ||||||||| || | ||||| |||||
Sbjct: 239 tactccctccgtttctaaatatttgacaccgtcaactttttagcacatgtttgaccattc 180
Query: 78 gtcttattcaaaa 90
|| ||||||||||
Sbjct: 179 gttttattcaaaa 167
Score = 46.1 bits (23), Expect = 3e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||| ||| |||||| | |||||||||| || |||||| ||
Sbjct: 79 aaattttttaaataagacgaacggttaaacatatttaaaaaagtcaatggcgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 ttagaaa 13
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 176 bits (89), Expect = 1e-43
Identities = 175/206 (84%)
Strand = Plus / Plus
Query: 52 actttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannn 111
||||||| | || ||||||| ||||||| |||||||||||| ||||||||||||| |
Sbjct: 32 acttttttgaacatatttgaccattcgttttattcaaaaaagttaagtaattattaattc 91
Query: 112 nnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacata 171
|||||| ||||||| ||| ||||||||||||||||||| | |||||||||||| ||
Sbjct: 92 ttttcatatcatttgattcattattaaatatactttcatgtatatatatagttttactta 151
Query: 172 tttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgt 231
||||| |||| ||| ||||| ||||| |||||||||| ||||||||||| ||||||||
Sbjct: 152 tttcacaaaaaaattttaataatacgaacggtcaaacatatgctaaaaagttaacggtgt 211
Query: 232 caaacatttcgaaacggatggagtat 257
||||||||| |||||||| |||||||
Sbjct: 212 caaacatttagaaacggagggagtat 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 236 tactccctccgtttctaaatgtttgacaccgttaactttttag 194
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagt 222
|||||||||||| ||||||||||||| |||| | |||||||
Sbjct: 72 ttttttgaataaaacgaatggtcaaatatgttcaaaaaagt 32
>RF01058;MIR806;BX664712.3/32416-32656 4530:Oryza sativa (rice)
Length = 241
Score = 176 bits (89), Expect = 1e-43
Identities = 184/218 (84%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| | |||||||||||||||||||||| | | ||||| | |
Sbjct: 2 tactccctccgtttcgttttatttgacaccgttgactttttagcatatgtttgaccgctt 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| ||||| ||||||||||| || ||||| | |||||| ||||||| |||||||
Sbjct: 62 gttttatttaaaaaatttaaatatttattaatttttttcatatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||| ||||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122 aatatacttttatgtatatatatagttttacatatttcacaaaattttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaa 235
|| |||||||||||||||||||||||||| | ||||||
Sbjct: 182 aacggtcaaacatgtgctaaaaagtcaacagcgtcaaa 219
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||| || | |||||||||| |||||||||||||||||||||||| |
Sbjct: 79 aaattttttaaataaaacaagcggtcaaacatatgctaaaaagtcaacggtgtcaaataa 20
Query: 239 ttcgaaacggatggagtat 257
||||||||| |||||||
Sbjct: 19 aacgaaacggagggagtat 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 39 tttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaattt 95
|||||| | ||||||||||||| || | ||||| | |||||||||||||||||||||
Sbjct: 219 tttgacgctgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaattt 163
>RF01058;MIR806;AACV01000276.1/1941-2161 39947:Oryza sativa Japonica
Group
Length = 221
Score = 176 bits (89), Expect = 1e-43
Identities = 145/166 (87%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 39 ttcgtcttattcaaaaaatttaagtaattattaatttttttcatatcatttgatttattg 98
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||||||||||||| ||||| ||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 99 ttaaatatacttttatgtatacatatagttttacacatttcacaaaagtttttgaataag 158
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||| ||||||| |||| ||||| ||||||| |||||||||||
Sbjct: 159 acgaacggtcaaatatgtttaaaaaaatcaacggcgtcaaacattt 204
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacat 210
||||||||||||||||||||| ||||||||||
Sbjct: 59 aaattttttgaataagacgaacggtcaaacat 28
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||||| ||||||| ||||| || ||||||| | |||||||||||||||||
Sbjct: 204 aaatgtttgacgccgttgatttttttaaacatatttgaccgttcgtcttattcaaaaa 147
>RF01058;MIR806;AP003683.3/85964-85726 39947:Oryza sativa Japonica
Group
Length = 239
Score = 174 bits (88), Expect = 4e-43
Identities = 183/216 (84%), Gaps = 2/216 (0%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
|||| |||||| ||||||||||||| | | ||||| ||||| ||||||| |||||||
Sbjct: 18 aaatatttgacgccgttgacttttttaaatatgtttgaccattcatcttattaaaaaaat 77
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
||||||||||||| | | |||| ||||||| |||||||||||||||| || ||
Sbjct: 78 ttaagtaattattaattatattcctatcatttgattcattgttaaatatactt--atata 135
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 136 tacatatagttttatatatttcacaaaagtttttgaataagacgaatgtgcaaacatgtg 195
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||||||||||||||| |||| ||||||||
Sbjct: 196 ctaaaaagtcaacggtgtcaaatatttagaaacgga 231
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
||||||||| |||| |||||||||||||||||||||| || | |||| |||||||||||
Sbjct: 232 ctccgtttctaaatatttgacaccgttgactttttagcacatgtttgcacattcgtctta 173
Query: 84 ttcaaaaa 91
||||||||
Sbjct: 172 ttcaaaaa 165
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||| |||||||||||||| | ||||||||||||| |||||| ||
Sbjct: 79 aaatttttttaataagatgaatggtcaaacatatttaaaaaagtcaacggcgtcaaatat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 174 bits (88), Expect = 4e-43
Identities = 201/240 (83%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||| |||| |||||| |||||||||| ||| | ||||| |||||
Sbjct: 2 tactccctctgtttctaaatatttgacgtcgttgactttc--gtaaatgtttgaccattc 59
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|| |||||||||| || |||||||||||| | ||||| ||||||| ||| |||
Sbjct: 60 gttttattcaaaatatctaagtaattattaattatttttatatcatttgattcattttta 119
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
||||||||| ||||| ||||||||||||||||||| |||||| ||| |||||||||||
Sbjct: 120 aatatacttatatgtatgcatatagttttacatattttataaaagtttctgaataagacg 179
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|| |||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 180 aacggtcaaacatgtgccaaaaagtcaacggtgtcaaatatttagaaacggagggagtat 239
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| |||||||||||||||||||| | || | ||||| | |||
Sbjct: 238 tactccctccgtttctaaatatttgacaccgttgactttttggcacatgtttgaccgttc 179
Query: 78 gtcttattca 87
||||||||||
Sbjct: 178 gtcttattca 169
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 184 ttttgaataagacgaatggtcaaacat 210
|||||||||| ||||||||||||||||
Sbjct: 72 ttttgaataaaacgaatggtcaaacat 46
>RF01058;MIR806;AAAA02014718.1/60336-60096 39946:Oryza sativa Indica
Group
Length = 241
Score = 174 bits (88), Expect = 4e-43
Identities = 203/241 (84%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag-tacgtatttgatcatt 76
|||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2 tactccctcccttttaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
| ||||||| ||||||| ||||||||||| || |||| | |||| || |||
Sbjct: 62 catcttatttaaaaaatgtaagtaattatgtagtctggtcatagcaggggattcatggtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||| ||||||||||||||||||| |||||||| || |||||| ||||| ||
Sbjct: 122 aaatatactttgatgtacacatatagttttatatatttcacaatttttttt-aataaaac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| || ||||||||| ||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 181 gaacagtgaaacatgtgttaaaaagtcaacgatgtcaaacattttgaaacggagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacatcgttgacttttta 199
Score = 65.9 bits (33), Expect = 3e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatt 239
||||||| ||||||| ||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 78 attttttaaataagatgaatggtcaaacacgtatttaaaaagtcaacggtgtcaaacatt 19
Query: 240 t 240
|
Sbjct: 18 t 18
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 174 bits (88), Expect = 4e-43
Identities = 118/128 (92%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 99 tatcatttgattcattgttaaatatactttcatatagacatatagttttacatatttcac 158
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 159 aattttttttgaataacacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 218
Query: 238 tttcgaaa 245
||| ||||
Sbjct: 219 tttagaaa 226
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||| || |||| ||||||||||||||||||||||||||| || | ||||| | ||
Sbjct: 238 gtactcccgccatttctaaatgtttgacaccgttgactttttagcacatgtttgaccgtt 179
Query: 77 cgtcttattcaaaaaa 92
||| ||||||||||||
Sbjct: 178 cgtgttattcaaaaaa 163
Score = 50.1 bits (25), Expect = 2e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||| ||||| ||||||||||||||||| |||||||||||| | |||||| |||
Sbjct: 76 atttttttaataaaacgaatggtcaaacatg-cttaaaaagtcaacagcgtcaaattttt 18
Query: 241 cgaaacgga 249
||||||||
Sbjct: 17 agaaacgga 9
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 174 bits (88), Expect = 4e-43
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 95 tatcatttgatttattgttaaatatattttcatgtatacatataattttacatatttcac 154
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |
Sbjct: 155 aaaattttttgaataagacgaacggtcaaacatatgttaaaaagtcaacggtgtcaaata 214
Query: 238 tttcgaaacgga 249
||| |||||||
Sbjct: 215 tttaaaaacgga 226
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||| |||| ||||||||||||||||||||| | | ||||| | |||
Sbjct: 233 tactctctccgtttttaaatatttgacaccgttgactttttaacatatgtttgaccgttc 174
Query: 78 gtcttattcaaaaaattt 95
||||||||||||||||||
Sbjct: 173 gtcttattcaaaaaattt 156
>RF01058;MIR806;AP008218.1/20023845-20024085 39947:Oryza sativa
Japonica Group
Length = 241
Score = 174 bits (88), Expect = 4e-43
Identities = 197/233 (84%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||| ||||| |||| |||||| ||||||||||||| | | |||||||||||
Sbjct: 2 tactccctctgtttctaaatatttgacgccgttgacttttttaaatatgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnn-catatcgtttgatttattgtt 136
|||||||| |||||| ||||| ||||||| | |||||| ||||||| || |||
Sbjct: 62 gtcttatttaaaaaaattaagcaattattaattttttttcatatcatttgattcatggtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||| ||| ||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 122 aaatatactttcacgtatacatatagttttacatattgcataattcttttt-aataagac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||||||| |||||||||| ||||||| |||||||||| ||||||||
Sbjct: 181 gaatggtcaaacatatgctaaaaagacaacggtatcaaacatttagaaacgga 233
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||||||||| |||||||| | ||||||||||||| |||||| ||||
Sbjct: 76 ttttttaaataagacgaatgatcaaacatatttaaaaaagtcaacggcgtcaaatattta 17
Query: 242 gaaacggatggagtat 257
||||| || |||||||
Sbjct: 16 gaaacagagggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 19 actccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcg 78
|||| ||||||||| |||||||||| ||||||| |||||||| | | ||||| ||||||
Sbjct: 239 actctctccgtttctaaatgtttgataccgttgtctttttagcatatgtttgaccattcg 180
Query: 79 tcttattcaaaa 90
||||||| ||||
Sbjct: 179 tcttattaaaaa 168
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 103 tatcatttgattcattgttaaatatagtttcatgtatacatatagttttacatatttcac 162
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||||||||| ||||| ||||| |||||| |||||||||||||||||||| |||||||||
Sbjct: 163 aaaattttttaaataaaacgaacggtcaagcatgtgctaaaaagtcaacgatgtcaaaca 222
Query: 238 tttcgaaacgga 249
||| ||||||||
Sbjct: 223 tttagaaacgga 234
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| ||||||||| |||||||||||| |||||||||||||| || | |||| | |||
Sbjct: 241 tactctctccgtttctaaatgtttgacatcgttgactttttagcacatgcttgaccgttc 182
Query: 78 gtcttattcaaaaaattt 95
|| ||||| |||||||||
Sbjct: 181 gttttatttaaaaaattt 164
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacg 227
|||||| |||||| ||||||||||||||| | |||||||||||||
Sbjct: 76 tttttttaataaggcgaatggtcaaacatattttaaaaagtcaacg 31
>RF01058;MIR806;AP008207.1/19812836-19813025 39947:Oryza sativa
Japonica Group
Length = 190
Score = 174 bits (88), Expect = 4e-43
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
|||||||||| |||||||| ||||||||||||||||| || | | |||| ||||
Sbjct: 26 tttgatcatttgtcttatttaaaaaatttaagtaattgttaattcttttcctatcatttg 85
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| ||||
Sbjct: 86 atttattgttaaatatacttttatgtatacatatagttttacatatttcacaaaaatttt 145
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgt 231
|||||||||| |||| ||||||||||||||||| |||||| ||||
Sbjct: 146 tgaataagacaaatgatcaaacatgtgctaaaatgtcaacagtgt 190
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 43 acaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
|||| |||||| |||||| || | |||||||||| ||||||||||||||
Sbjct: 190 acactgttgacattttagcacatgtttgatcatttgtcttattcaaaaa 142
>RF01058;MIR806;AC116601.1/158497-158738 39947:Oryza sativa Japonica
Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 203/242 (83%), Gaps = 5/242 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt---agtacgtatttgatca 74
||||||||||||||| |||| ||||| ||||||| ||||| | || ||||||| |
Sbjct: 2 tactccctccgtttctaaatagttgactccgttgattttttttaaata--tatttgaccg 59
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||| |||||||||||||| ||||||||||| | | |||| ||| |||| |||
Sbjct: 60 ttcgttttattcaaaaaattcaagtaattattaattctttccctatcattttatttgttg 119
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||||||||||| | ||||| |||||||||||||||||||| | |||| ||||||||||||
Sbjct: 120 ttaaatatactattatgtatacatatagttttacatattttacaaaagtttttgaataag 179
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
||||| ||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 180 acgaacggtcaaacatgtgctaaaaagtcaacgctgtcaaatgtttagaaacggagggag 239
Query: 255 ta 256
||
Sbjct: 240 ta 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||||||||||||| ||| ||||||| |||||||||||||| || | ||||| | ||
Sbjct: 242 gtactccctccgtttctaaacatttgacagcgttgactttttagcacatgtttgaccgtt 183
Query: 77 cgtcttattcaaaaa 91
|||||||||||||||
Sbjct: 182 cgtcttattcaaaaa 168
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 174 bits (88), Expect = 4e-43
Identities = 122/132 (92%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 100 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacatatttcac 159
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
Sbjct: 160 aat-ttttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaata 218
Query: 238 tttcgaaacgga 249
||| ||||||||
Sbjct: 219 tttagaaacgga 230
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| ||||||||| |||| |||||||||||||||||||||| || | ||| | | ||
Sbjct: 238 gtactctctccgtttctaaatatttgacaccgttgactttttagcacatgtttaaccgtt 179
Query: 77 cgtcttattcaaaaaa 92
||||||||||||||||
Sbjct: 178 cgtcttattcaaaaaa 163
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| |||||||| ||| |||||| |||| ||||||||||||| |||||| ||||
Sbjct: 75 ttttttaataagacaaatagtcaaatatgttttaaaaagtcaacgacgtcaaatatttaa 16
Query: 243 aaacggatggagtat 257
||| |||||||||||
Sbjct: 15 aaatggatggagtat 1
>RF01058;MIR806;DQ280666.1/5879-6118 39947:Oryza sativa Japonica
Group
Length = 240
Score = 174 bits (88), Expect = 4e-43
Identities = 127/140 (90%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 101 tatcatttgattcattgttaaatatacttatatgtatacatatagttttacatatttcat 160
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || |
Sbjct: 161 aaaattttttgaacaagacgaacggtcaaacatgtgctaaaaagttaacggtgtcgaata 220
Query: 238 tttcgaaacggatggagtat 257
|| |||||||| |||||||
Sbjct: 221 ttcagaaacggagggagtat 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||| || ||||||||| ||||||||| || | ||||| | |||
Sbjct: 239 tactccctccgtttctgaatattcgacaccgttaactttttagcacatgtttgaccgttc 180
Query: 78 gtcttattcaaaaaattt 95
||||| ||||||||||||
Sbjct: 179 gtcttgttcaaaaaattt 162
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacat 210
|||||||| ||||||||||||||||||||||
Sbjct: 78 aatttttttaataagacgaatggtcaaacat 48
>RF01062;MIR812;AP002537.2/60669-60502 39947:Oryza sativa Japonica
Group
Length = 168
Score = 172 bits (87), Expect = 2e-42
Identities = 151/173 (87%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
|||||||||| |||| ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 168 gactttttagcacgtgtttgaccattcgtcttatttaaaaaa----agtaattatttatt 113
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 112 tttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttatat 53
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 52 atttcat-aaatttttttaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
|||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 127 ttttttaaataagacgaatggtcaaacacgtgctaaaaagtc 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaattta 96
|||||||||| || ||||||| | ||||||||||| ||||||||||
Sbjct: 1 gactttttagcacatatttgaccgttcgtcttattaaaaaaattta 46
>RF01058;MIR806;AC152969.1/99940-100170 39947:Oryza sativa Japonica
Group
Length = 231
Score = 172 bits (87), Expect = 2e-42
Identities = 182/216 (84%)
Strand = Plus / Plus
Query: 31 tcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaa 90
||||||| |||||| ||||||||||||| | | ||||| | ||||||||||||||||
Sbjct: 9 tcaaaatatttgacgccgttgacttttttaaaaatgtttgaccgttcgtcttattcaaaa 68
Query: 91 aatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcat 150
|||||||||||||||| | | |||| ||||||||||||||||||||||||||||
Sbjct: 69 aatttaagtaattattaattcttttcgtatcatttgatttattgttaaatatactttcat 128
Query: 151 gtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacat 210
||| ||||||||||||||| ||||||||||| ||||| ||||| | ||| ||||||| ||
Sbjct: 129 gtatacatatagttttacacatttcataaaagtttttaaataaaatgaacggtcaaatat 188
Query: 211 gtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
| |||||||||||||||| |||||||| |||||
Sbjct: 189 atttaaaaaagtcaacggtgttaaacatttagaaac 224
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| |||||||||| | ||||||||||||| |||||| ||
Sbjct: 73 aaattttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgtcaaatat 14
Query: 239 tt 240
||
Sbjct: 13 tt 12
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 28 gtttcaaaatgtttgacaccgttgacttttt 58
||||| |||||||| ||||||||||||||||
Sbjct: 224 gtttctaaatgtttaacaccgttgacttttt 194
>RF01058;MIR806;AP002882.2/89577-89811 39947:Oryza sativa Japonica
Group
Length = 235
Score = 172 bits (87), Expect = 2e-42
Identities = 165/191 (86%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||| |||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 48 tttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttt 107
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||| |||||||||||||||||||||||||||||| |||||||||||||| || | |||
Sbjct: 108 attaattgttaaatatactttcatgtacacatat--ttttacatatttca-caattattt 164
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
| |||||||| || ||| ||||| |||||||||||||||| ||||||||||||| ||||
Sbjct: 165 ttaataagacaaacggttaaacacgtgctaaaaagtcaacagtgtcaaacattttaaaac 224
Query: 247 ggatggagtat 257
||| |||||||
Sbjct: 225 ggagggagtat 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||||| |||||||||||||| ||||||||||||| |||| ||| | | ||
Sbjct: 234 tactccctccgttttaaaatgtttgacactgttgactttttagcacgtgtttaaccgttt 175
Query: 78 gtcttattcaaaa 90
|||||||| ||||
Sbjct: 174 gtcttattaaaaa 162
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
|||||||||||||||||||||||||||||||
Sbjct: 76 aaattttttgaataagacgaatggtcaaaca 46
>RF01058;MIR806;AC078977.6/20616-20377 39947:Oryza sativa Japonica
Group
Length = 240
Score = 172 bits (87), Expect = 2e-42
Identities = 198/236 (83%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||| | |||| |||||| ||||||||||||| || | | ||| ||||| |||
Sbjct: 6 ccctccgttcctaaatatttgacgccgttgacttttttaaacatgtctgaccattcttct 65
Query: 82 tattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaata 141
|||| |||| ||||||||||||||| | | |||| ||||||| |||||||||||
Sbjct: 66 tatttaaaagatttaagtaattattaattctcatcctatcatttgattcattgttaaata 125
Query: 142 tactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatg 201
|||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 126 tacttt-atgtatacatatagttttacatatttcataaaagtttttgaataagacgaacg 184
Query: 202 gtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||||| |||||| ||||||| |||||| |||| | ||||| |||||||
Sbjct: 185 gtcaaacatgttttaaaaaatcaacggcgtcaaatatttagggacggagggagtat 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||| |||| ||||||| ||||||||| |||||| ||||||||||||| |||||| ||
Sbjct: 79 aaatcttttaaataagaagaatggtcagacatgtttaaaaaagtcaacggcgtcaaatat 20
Query: 239 ttcgaaacgga 249
|| | ||||||
Sbjct: 19 ttaggaacgga 9
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||| | |||| |||||| ||||||| |||||| || | ||||| | |||
Sbjct: 239 tactccctccgtccctaaatatttgacgccgttgattttttaaaacatgtttgaccgttc 180
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 179 gtcttattcaaaaa 166
>RF01058;MIR806;AP003350.3/33008-32769 39947:Oryza sativa Japonica
Group
Length = 240
Score = 170 bits (86), Expect = 7e-42
Identities = 190/227 (83%)
Strand = Plus / Plus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
|||| |||||||||| | |||| |||||||||||||| || | ||||| | || |||||
Sbjct: 6 cctcagtttcaaaatatctgacgtcgttgactttttagcacatgtttgaccgtttgtctt 65
Query: 83 attcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatat 142
||| |||||||||||||||||||| | | |||| |||||||||||||||| |||
Sbjct: 66 atttaaaaaatttaagtaattattaattcttttcctatcatttgatttattgttaagtat 125
Query: 143 actttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatgg 202
| ||| ||||| |||||| |||||||||||| |||||| ||||||||||||||||| |
Sbjct: 126 attttgatgtaggcatataattttacatattttataaaagtttttgaataagacgaagtg 185
Query: 203 tcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||| ||||| |||||| ||||||||| |||| ||||||||
Sbjct: 186 tcaaacatgtactaaacagtcaatggtgtcaaatattttgaaacgga 232
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||||||||||||| ||||||||| |||||| |||||||| | ||||| |||
Sbjct: 239 tactctctccgtttcaaaatatttgacaccattgactgtttagtacatgtttgacacttc 180
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 179 gtcttattcaaaaa 166
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacg 227
||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 78 aaattttttaaataagacaaacggtcaaacatgtgctaaaaagtcaacg 30
>RF01058;MIR806;AP003432.2/54591-54357 39947:Oryza sativa Japonica
Group
Length = 235
Score = 170 bits (86), Expect = 7e-42
Identities = 180/211 (85%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 41 tgacaccgttgacttttta-gtacgtatttgatcattcgtcttattcaaaaaatttaagt 99
|||||| ||| |||||||| | |||| ||| | ||||||||||||| |||||| ||||||
Sbjct: 21 tgacacagttaactttttaagcacgtgtttaaccattcgtcttattaaaaaaaattaagt 80
Query: 100 aattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacacata 159
||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||
Sbjct: 81 aattatttatttttttcatatcatttaatttattgttaaatatactttcatgtatacata 140
Query: 160 tagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaa 219
||| ||||||||||| | ||||||||| ||||||||||| || ||||||||||| |||
Sbjct: 141 tagatttacatatttta-caaatttttttaataagacgaacagttaaacatgtgctgaaa 199
Query: 220 agtcaacggtgtcaaacatttcgaaacggat 250
||| ||||||||||||||||| ||||||||
Sbjct: 200 agttaacggtgtcaaacattttaaaacggat 230
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
||||||| |||||||||||||||||| |||||| || || | ||| | ||||||||||
Sbjct: 229 tccgttttaaaatgtttgacaccgttaacttttcagcacatgtttaactgttcgtcttat 170
Query: 85 tcaaaaaattt 95
| |||||||||
Sbjct: 169 taaaaaaattt 159
Score = 50.1 bits (25), Expect = 2e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtca 233
|||||| ||||||||||||||| ||||| |||| |||||||| ||| ||||||
Sbjct: 73 tttttttaataagacgaatggttaaacacgtgcttaaaaagttaactgtgtca 21
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa Indica
Group
Length = 238
Score = 170 bits (86), Expect = 7e-42
Identities = 120/130 (92%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 100 tatcatttgattcattgttaaatatattttcatgtatacatatagttttacatatttcac 159
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
Sbjct: 160 aaaa-tttttgaataagacgaatggtcaaacttgtgctaaaaagtcaacggggtcaaata 218
Query: 238 tttcgaaacg 247
||| ||||||
Sbjct: 219 tttagaaacg 228
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| || |||||| |||| |||||| ||||||||||||||| || ||||| |||||
Sbjct: 237 tactcgcttcgtttctaaatatttgaccccgttgactttttagcacaagtttgaccattc 178
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 177 gtcttattcaaaaa 164
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 170 bits (86), Expect = 7e-42
Identities = 139/159 (87%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||| ||||||||||||| | | |||| ||| ||| ||||
Sbjct: 36 ttcgtcttattcaaaaaaattaagtaattattaattcttttcctatcatttaattcattg 95
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||||||||| ||||| ||||||||||||| |||||||| |||| ||||||||||||
Sbjct: 96 ttaaatatacttatatgtatacatatagttttatatatttcacaaaagtttttgaataag 155
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtca 233
||||| |||||||||||||||||||||||||||||||||
Sbjct: 156 acgaacggtcaaacatgtgctaaaaagtcaacggtgtca 194
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 41 tgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
|||||||||||||||||||| || | ||||| | |||||||||||||||||
Sbjct: 194 tgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaa 144
>RF01058;MIR806;AACV01024800.1/18542-18302 39947:Oryza sativa
Japonica Group
Length = 241
Score = 170 bits (86), Expect = 7e-42
Identities = 182/215 (84%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 35 aatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatt 94
|||||||||| || ||||||| |||| || | ||| | | ||||| ||||| ||||||||
Sbjct: 21 aatgtttgacgccattgacttcttagcacatgtttaaccgttcgttttatttaaaaaatt 80
Query: 95 taagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtac 154
||||||||||| | |||||| ||||||| ||||||||||||| || |||||
Sbjct: 81 -aagtaattattaattcttttcatatcatttgattcattgttaaatatatctttatgtag 139
Query: 155 acatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgc 214
|||||| ||||| |||||||| |||| ||||||||||||||||| |||||||||| |||
Sbjct: 140 gcatataattttatatatttcacaaaagtttttgaataagacgaacggtcaaacatctgc 199
Query: 215 taaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||||||||||||||||||||||||||||||||||
Sbjct: 200 taaaaagtcaacggtgtcaaacatttcgaaacgga 234
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
|||||||||| ||||||||||||||||||||||||||| | | ||||| | ||||||||
Sbjct: 236 cctccgtttcgaaatgtttgacaccgttgactttttagcagatgtttgaccgttcgtctt 177
Query: 83 attcaaaaa 91
|||||||||
Sbjct: 176 attcaaaaa 168
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|||||||| ||||| ||||| ||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 80 aattttttaaataaaacgaacggttaaacatgtgctaagaagtcaatggcgtcaaacatt 21
>RF01058;MIR806;AACV01011837.1/14894-15134 39947:Oryza sativa
Japonica Group
Length = 241
Score = 170 bits (86), Expect = 7e-42
Identities = 154/179 (86%)
Strand = Plus / Plus
Query: 32 caaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||||||| || |||||||||| || ||||||| |||||||||||||||||||
Sbjct: 16 caaaatgtttgacgccattgacttttttaaacatatttgaccattcgtcttattcaaaaa 75
Query: 92 atttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatg 151
|||||||||||||| | | |||| ||||||||||||||||||||||||| |||
Sbjct: 76 ttttaagtaattattaattcttttcctatcatttgatttattgttaaatatacttttatg 135
Query: 152 tacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacat 210
|| | ||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 136 tatatatatagttttatatatttcacaaaagtttttaaataagacgaatggtcaaacat 194
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||||||||||| |||| |||||||||| || |||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaatatgtttaaaaaagtcaatggcgtcaaacattt 18
>RF01058;MIR806;AACV01022161.1/13533-13298 39947:Oryza sativa
Japonica Group
Length = 236
Score = 170 bits (86), Expect = 7e-42
Identities = 185/219 (84%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 39 tttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaag 98
||||||||||||||| ||||| ||||| ||||| ||||||||||||| |||||||||||
Sbjct: 19 tttgacaccgttgaccttttaatacgtgtttgaccattcgtcttattaaaaaaatttaaa 78
Query: 99 taattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgtacacat 158
|||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 79 taattatttattcttttcatattatttgattcattattaaatatactttcatgtacacat 138
Query: 159 atagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtgctaaa 218
||||||||||||||| | | ||||| ||||||||||| || ||||||||||||||
Sbjct: 139 gtagttttacatattt-tttatttttttaaaataagacgaacagttaaacatgtgctaaa 197
Query: 219 aagtcaacggtgtcaaacatttcgaaacggatggagtat 257
|||||||| | |||||||||| ||||||| |||||||
Sbjct: 198 aagtcaacaatatcaaacattttaaaacggagggagtat 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 75 aaatttttttaataagacgaatggtcaaacacgtattaaaaggtcaacggtgtcaaa 19
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 235 tactccctccgttttaaaatgtttgatattgttgactttttag 193
>RF01058;MIR806;AP008212.1/5644176-5643940 39947:Oryza sativa
Japonica Group
Length = 237
Score = 170 bits (86), Expect = 7e-42
Identities = 199/235 (84%), Gaps = 8/235 (3%)
Strand = Plus / Plus
Query: 24 ctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcattcgtctt 82
||||||||||||||||||||||||||| | ||||| ||||||| ||||| ||||||||||
Sbjct: 8 ctccgtttcaaaatgtttgacaccgttaaattttttagtacgtgtttgaccattcgtctt 67
Query: 83 attcaaaaaatttaagtaattatttannnnnnncatatcgt-ttgatttattgttaaata 141
||| |||||| |||||||||||| || ||| |||||| |||||||||||
Sbjct: 68 attaaaaaaa----agtaattatttattgttttcacatcaaattgattcattgttaaata 123
Query: 142 tactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatg 201
|||||| ||||||||||||||||||||||||||||| | |||||| ||||||| ||| |
Sbjct: 124 tacttttatgtacacatatagttttacatatttcat--attttttttaataagatgaacg 181
Query: 202 gtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| | | || ||||||||||||||| |||||||| |||| |||||||||||||||
Sbjct: 182 gttagatatatgctaaaaagtcaacagtgtcaaatattttgaaacggatggagta 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 240
|||||| ||||||||||||||||||||| || || ||||| | |||||||||||||||||
Sbjct: 77 tttttttaataagacgaatggtcaaacacgtactaaaaaatttaacggtgtcaaacattt 18
Query: 241 cgaaacgga 249
||||||||
Sbjct: 17 tgaaacgga 9
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 237 gtactccatccgtttcaaaatatttgacactgttgactttttag 194
>RF01058;MIR806;AC133006.6/55905-56146 39947:Oryza sativa Japonica
Group
Length = 242
Score = 170 bits (86), Expect = 7e-42
Identities = 172/203 (84%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| |||| |||| |||| ||||||||||||||| ||| || ||||||| | |||
Sbjct: 2 tactctctccatttctaaatatttgacaccgttgaccattttaaacatatttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||| | | ||| |||||||||||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattaatttttttcctattatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||| ||||| | ||||||||||| |||||| | |||| |||||||||||||||
Sbjct: 122 aatatacttttatgtatatatatagttttatatatttaacaaaagtttttgaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaa 220
|| ||||||||||||||||||||
Sbjct: 182 aacggtcaaacatgtgctaaaaa 204
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaacggtcaaatatgtttaaaatggtcaacggtgtcaaatat 20
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 19 ttagaaa 13
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 170 bits (86), Expect = 7e-42
Identities = 199/239 (83%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| ||||||||||||||| |||||| |||||||||||| | | ||||| | |||
Sbjct: 2 tacttcctccgtttcaaaatatttgacgtcgttgacttttttaaatatgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||||||||||||||||| | |||| ||||||| |||||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattattaattttttttctatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|| |||||| ||||| ||||||||||||| ||||||| |||| |||| ||||||||||
Sbjct: 122 aaaatacttatatgtatacatatagttttatatatttcgcaaaagttttggaataagacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| ||| |||||||||||||||||||||||| |||||| |||| |||||||| ||||||
Sbjct: 182 aacggttaaacatgtgctaaaaagtcaacggcgtcaaatatttagaaacggagggagta 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| |||||| ||||||||||||||| || | ||| | | |||
Sbjct: 240 tactccctccgtttctaaatatttgacgccgttgactttttagcacatgtttaaccgttc 181
Query: 78 gtcttattcaaaaa 91
||||||||| ||||
Sbjct: 180 gtcttattccaaaa 167
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||| |||||||||| | |||||||||||| |||||| ||
Sbjct: 79 aaatttttttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 tttgaaacgga 9
>RF01058;MIR806;AACV01004906.1/16108-16348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 168 bits (85), Expect = 3e-41
Identities = 156/182 (85%)
Strand = Plus / Plus
Query: 76 tcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgt 135
|||||||||||||||||||||| |||||||| | | ||| ||||||| |||||
Sbjct: 60 tcgtcttattcaaaaaatttaaataattattaattttattcctattatttgattcattgt 119
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||
Sbjct: 120 taaatatacttttatgcatacatatagttttacatatttcacaaaagtttttgaataaga 179
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagt 255
||| |||||||||||||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 180 cgagcagtcaaacatgtgctaaaaagtcaacggtgtcaaataaaacgaaacggagggagt 239
Query: 256 at 257
||
Sbjct: 240 at 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| | |||||||||||||||||||||| || | ||||| ||
Sbjct: 240 tactccctccgtttcgttttatttgacaccgttgactttttagcacatgtttgactgctc 181
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtg 213
|||||||||||||||||||| ||| |||||||||
Sbjct: 79 aaattttttgaataagacgagcggtaaaacatgtg 45
>RF01058;MIR806;AC130607.2/29520-29261 39947:Oryza sativa Japonica
Group
Length = 260
Score = 168 bits (85), Expect = 3e-41
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
||||||||||||||||||| || |||||||||||| | || ||| | |||||||||||||
Sbjct: 1 ccgtttcaaaatgtttgacgcctttgactttttagcatgtgtttaaccattcgtcttatt 60
Query: 86 caaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatact 145
||||| |||||||||||||| | |||||| ||||||| |||||||||||||||
Sbjct: 61 taaaaagtttaagtaattattaattcttttcatatcatttgattcattgttaaatatact 120
Query: 146 ttcatgtacacatatagttttacatatttcataa 179
||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcatgtacacatatagttttacatatttcataa 154
Score = 135 bits (68), Expect = 4e-31
Identities = 90/96 (93%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 145 tttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtc 204
|||||||||||||||||||||||||||||||| || |||||||||||||||||| |||
Sbjct: 158 tttcatgtacacatatagttttacatatttcacaat-ttttttgaataagacgaacagtc 216
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||| |||||||||||||||||||
Sbjct: 217 aaacatgtgctaaaaaatcaacggtgtcaaacattt 252
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||||||||| ||||| |||||||||||||| || ||||||||||| |
Sbjct: 66 tttttaaataagacgaatggttaaacacatgctaaaaagtcaaaggcgtcaaacattttg 7
Query: 243 aaacgg 248
||||||
Sbjct: 6 aaacgg 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
|||||| |||||||||||||||||||| ||||||| || | ||||| |||||||||||
Sbjct: 260 ccgtttaaaaatgtttgacaccgttgattttttagcacatgtttgactgttcgtcttatt 201
Query: 86 caaaaaa 92
|||||||
Sbjct: 200 caaaaaa 194
>RF01058;MIR806;AP003911.3/90546-90311 39947:Oryza sativa Japonica
Group
Length = 236
Score = 168 bits (85), Expect = 3e-41
Identities = 154/178 (86%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 79 tcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaa 138
||||||| |||||||||||||||| ||| | | |||| ||||||||||||||||
Sbjct: 59 tcttatttaaaaaatttaagtaatcattaattcttttcctatcatttgatttattgttaa 118
Query: 139 atatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacga 198
||||| ||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 119 atatatttttatgtatacatatagttttacatatttcacaaaagttttt-aataagacga 177
Query: 199 atggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||| |||||||||||||||||||||||| |||||| |||| || ||||| ||||||
Sbjct: 178 atggttaaacatgtgctaaaaagtcaacggcgtcaaatatttagagacggagggagta 235
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||||||||| || |||| |||||| ||||||||||||||| || | ||| | ||||
Sbjct: 236 gtactccctccgtctctaaatatttgacgccgttgactttttagcacatgtttaaccatt 177
Query: 77 cgtcttattcaaaa 90
||||||||| ||||
Sbjct: 176 cgtcttattaaaaa 163
>RF01058;MIR806;AAAA02003135.1/3633-3395 39946:Oryza sativa Indica
Group
Length = 239
Score = 168 bits (85), Expect = 3e-41
Identities = 163/190 (85%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| |||||||| |||| |||||||||||| |||||||| || | |||||||||||
Sbjct: 2 tactccatccgtttctaaatatttgacaccgttaactttttaaaacatgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||| |||||| |||| ||| |||| | |||||| |||||||||||||||
Sbjct: 62 gtcttattaaaaaaaattaaataaatattaattcttttcatatcatttgatttattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||| |||||||| || ||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 122 aatacactttcatttatacatatagttttacatatttcat-aaatttttttaataagatg 180
Query: 198 aatggtcaaa 207
||||||||||
Sbjct: 181 aatggtcaaa 190
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||||||||||| |||||||||| |||||||| |||||||||||| ||||
Sbjct: 76 tttttttaataagacgaatgatcaaacatgttttaaaaagttaacggtgtcaaatattta 17
Query: 242 gaaacggatggagtat 257
||||||||||||||||
Sbjct: 16 gaaacggatggagtat 1
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 168 bits (85), Expect = 3e-41
Identities = 156/182 (85%)
Strand = Plus / Plus
Query: 68 ttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttga 127
|||| |||||||||||||||||||||||||||||||||| | | |||| |||||
Sbjct: 51 ttgaccattcgtcttattcaaaaaatttaagtaattattaatttttttcctatcatttga 110
Query: 128 tttattgttaaatatactttcatgtacacatatagttttacatatttcataaaatttttt 187
|| ||||||| ||||| ||| ||||| ||||||||||||| |||||||| |||| ||||
Sbjct: 111 ttcattgttatatatatttttatgtagacatatagttttatatatttcacaaaagctttt 170
Query: 188 gaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacg 247
|| |||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 171 aaaaaagacgaacggtcaaacatgtgctaaaaagtcaatggtgtcaaatatttagaaacg 230
Query: 248 ga 249
||
Sbjct: 231 ga 232
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgt 212
|||||||||||||||||||||||||||| |||||
Sbjct: 78 aaattttttgaataagacgaatggtcaatcatgt 45
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||||||| |||| ||||||||| |||||||||||| || | ||||| | ||||||||
Sbjct: 233 ctccgtttctaaatatttgacaccattgactttttagcacatgtttgaccgttcgtctt 175
>RF01058;MIR806;AP008217.1/17014058-17013816 39947:Oryza sativa
Japonica Group
Length = 243
Score = 168 bits (85), Expect = 3e-41
Identities = 127/141 (90%)
Strand = Plus / Plus
Query: 116 catatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttc 175
|||||| ||||||| |||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 102 catatcatttgattaattgttaaatatacttataggtatacatatagttttacatatttc 161
Query: 176 ataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaa 235
|||||| ||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 162 ataaaagtttttaaataagacgaacagtcaaacatatgttaaaaagtcaacggtgtcaaa 221
Query: 236 catttcgaaacggatggagta 256
|||| |||||||||||||||
Sbjct: 222 tatttagaaacggatggagta 242
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
|||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 242 tactccatccgtttctaaatatttgacaccgttgacttttta 201
Score = 46.1 bits (23), Expect = 3e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||||||||| | ||| ||||||||| | ||||||| ||||| |||||| ||||
Sbjct: 76 ttttttgaataaaatgaactgtcaaacatataaaaaaaagttaacggcgtcaaatattta 17
Query: 242 gaaacggatggagta 256
|||||||| ||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 168 bits (85), Expect = 3e-41
Identities = 122/133 (91%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 101 tatcatttgattcattgttaaatatactttcatgtatatatatagttttacatatttcac 160
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaac 236
| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 161 agaattttttgaataagataaacggtcaaacatgtgcttaaaaagtcaacggtgtcaaac 220
Query: 237 atttcgaaacgga 249
|||| ||||||||
Sbjct: 221 atttagaaacgga 233
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||||| ||||||||||||||||||||||||||
Sbjct: 236 ccctccgtttctaaatgtttgacaccgttgacttttta 199
>RF01058;MIR806;AP008215.1/9244991-9244779 39947:Oryza sativa
Japonica Group
Length = 213
Score = 168 bits (85), Expect = 3e-41
Identities = 167/194 (86%), Gaps = 2/194 (1%)
Strand = Plus / Plus
Query: 65 tatttgatcattcgtcttattcaaaaaattt-aagtaattatttannnnnnncatatcgt 123
||||||| | ||||||||||| |||||| || ||||||||||| | |||||| |
Sbjct: 21 tatttgaccgttcgtcttattaaaaaaaattgaagtaattattaattcttttcatatcat 80
Query: 124 ttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaatt 183
|||||| ||||||||||||| ||| ||||| |||||| |||||||||||||| |||| |
Sbjct: 81 ttgattcattgttaaatatatttttatgtaggcatataattttacatatttcacaaaagt 140
Query: 184 ttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcga 243
|||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 141 ttttgaataagacgaa-cgtcaaacatgtgctaaaaagtcaatggtgtcaaatatttcga 199
Query: 244 aacggatggagtat 257
|||||| |||||||
Sbjct: 200 aacggagggagtat 213
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| |||| ||||||||| |||||||||||| || | ||||| | |||
Sbjct: 212 tactccctccgtttcgaaatatttgacaccattgactttttagcacatgtttga-cgttc 154
Query: 78 gtcttattcaaaaa 91
||||||||||||||
Sbjct: 153 gtcttattcaaaaa 140
>RF01062;MIR812;AP005756.3/134331-134500 39947:Oryza sativa Japonica
Group
Length = 170
Score = 167 bits (84), Expect = 1e-40
Identities = 147/169 (86%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnn 113
|||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 168 ttttaagtacgtgtttgaccattcgtcttattaaaaaaatttaagtaattatttattctt 109
Query: 114 nncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatt 173
|||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 108 ttcatatcatttgattcatcgttaaatatactttcatgtatacatatagttttacatatt 49
Query: 174 tcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagt 222
| | || |||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 48 t-aacaattttttttaataagacgaacggtcaaacatatgctaaaaagt 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaaca 209
||||||||| |||||||||||||||||||||
Sbjct: 127 aaatttttttaataagacgaatggtcaaaca 157
>RF01062;MIR812;AACV01022183.1/14192-14020 39947:Oryza sativa
Japonica Group
Length = 173
Score = 167 bits (84), Expect = 1e-40
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 51 gactttttagtacgtatttgatcattcgtcttattcaaaaaatttaagtaattatttann 110
|||||||||| || | ||||| ||||||||||||||||||||| ||||||||||| |
Sbjct: 173 gactttttagcacatgtttgagtattcgtcttattcaaaaaattcaagtaattattaatt 114
Query: 111 nnnnncatatcgtttgatttattgttaaatatactttcatgtacacatatagttttacat 170
|||| ||| ||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 113 ctttttctatcatttaatttattgttaaatatacttttatgtaggcatataattttacat 54
Query: 171 atttcataaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53 atttcataaaagtttttgaataagacaaatggtcaaacatgtgctaaaaagtc 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaaagtc 223
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 130 aattttttgaataagacgaatactcaaacatgtgctaaaaagtc 173
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 167 bits (84), Expect = 1e-40
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
|||| |||| |||||| |||||||||||||| | | ||||| | ||||||||||| ||
Sbjct: 13 tttctaaatatttgacgccgttgactttttaaaatatgtttgaccgttcgtcttatttaa 72
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
||| |||||||||||||| | | |||| ||||||| ||| ||||||||||||
Sbjct: 73 aaattttaagtaattattaattattttcctatcatttgattcattattaaatatacttat 132
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
||||| || ||||||||||||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 133 atgtatacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaac 192
Query: 209 atgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
||||||||||| ||||||||| | ||| |||| ||||||||
Sbjct: 193 atgtgctaaaatgtcaacggtattaaatatttagaaacgga 233
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||||| |||||||||| | |||||||||||||| |||||| |||| |
Sbjct: 75 tttttaaataagacgaacggtcaaacatattttaaaaagtcaacggcgtcaaatatttag 16
Query: 243 aaa 245
|||
Sbjct: 15 aaa 13
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 22 ccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtct 81
||||||||||| |||| ||| | ||||||||| |||||| || | ||||| | |||||||
Sbjct: 236 ccctccgtttctaaatatttaataccgttgacattttagcacatgtttgaccgttcgtct 177
Query: 82 tattcaaaaa 91
||||||||||
Sbjct: 176 tattcaaaaa 167
>RF01058;MIR806;AC134046.4/162313-162553 39947:Oryza sativa Japonica
Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 202/241 (83%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||| |||||||||| |||| |||||| | ||| ||||||| || ||| | | | |||
Sbjct: 2 tacttcctccgtttctaaatatttgacgcagttaacttttttaaacatatataaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
|||||||||||||||||||| |||||||| | | |||| |||||||| ||||||
Sbjct: 62 gtcttattcaaaaaatttaaataattattaattcttttcctatcatttgatttgttgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaa-ttttttgaataagac 196
|||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 122 aatatattttcatgtatacatatagttttacatatttcacaaaagttttttgaataagac 181
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||| |||||||||||| || |||||||||||| ||||| |||| |||||| | ||||||
Sbjct: 182 gaacggtcaaacatgtact-aaaagtcaacggcatcaaatatttagaaacgaagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||| |||||| |||| ||||| |||||||||||| ||||| | ||||| | |||
Sbjct: 240 tactcccttcgtttctaaatatttgatgccgttgactttt-agtacatgtttgaccgttc 182
Query: 78 gtcttattcaaaaaa 92
|||||||||||||||
Sbjct: 181 gtcttattcaaaaaa 167
Score = 46.1 bits (23), Expect = 3e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||| | | |||| ||||||| ||| | |||||| ||
Sbjct: 79 aaattttttgaataagacgaacggttatatatgtttaaaaaagttaactgcgtcaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 ttagaaacgga 9
>RF01058;MIR806;AAAA02026173.1/5859-5619 39946:Oryza sativa Indica
Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 200/241 (82%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| | ||||||| |||| |||||||||||| | ||||| || ||||||| ||||
Sbjct: 1 gtactcgccccgtttcgaaatatttgacaccgttaatttttttaaacatatttgaccatt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| |||||||||||||||||||| | |||| ||||||| ||||||
Sbjct: 61 cgtcttatttaaaaaatttaagtaattattaattctttttctatcatttgattcattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||| ||| ||||| |||||| ||||| |||||| | |||| ||| ||||||||
Sbjct: 121 aaatatatttttatgtaggcatataattttatatattttacaaaaaaatttaaataagac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||| |||| ||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 181 gaatggtcaaatatgtactaaaaaatcaacagtgtcaaacatttcgaaacggagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||| |||||
Sbjct: 240 tactccctccgtttcgaaatgtttgacactgttgattttttagtacatatttgaccattc 181
Query: 78 gtcttatt 85
||||||||
Sbjct: 180 gtcttatt 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| ||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct: 79 aaattttttaaataagacgaatggtcaaatatgtttaaaaaaattaacggtgtcaaatat 20
Query: 239 ttcgaaacgg 248
||||||||||
Sbjct: 19 ttcgaaacgg 10
>RF01058;MIR806;AP004140.3/16042-16282 39947:Oryza sativa Japonica
Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 126/140 (90%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 102 tatcatttgatttattgttaaatatacttatatgtatacatatagttttacatatttcac 161
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||| |
Sbjct: 162 aaaagtttttgaaaaagacaaacggtcaaatatgtgctaaaaagtcaacggtgtcaaata 221
Query: 238 tttcgaaacggatggagtat 257
||| ||||| |||||||||
Sbjct: 222 tttagaaacaaatggagtat 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 28 gtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattca 87
||||| |||| |||||||||||||||||||||| || ||||||| | || ||||| ||||
Sbjct: 230 gtttctaaatatttgacaccgttgactttttagcacatatttgaccgtttgtctttttca 171
Query: 88 aaaa 91
||||
Sbjct: 170 aaaa 167
>RF01058;MIR806;ABRL01000721.1/4249-4012 65489:Oryza barthii
Length = 238
Score = 167 bits (84), Expect = 1e-40
Identities = 195/232 (84%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| || ||||| |||| |||||| | ||||||||||| | ||||||| |||||
Sbjct: 2 tactccatctgtttctaaatatttgacgctgttgacttttttaaatatatttgaccattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||| ||||||| ||||||||||| | |||||| ||||||| |||||||
Sbjct: 62 atcttattaaaaaaatc-aagtaattattaattcttttcatatcatttgattcattgtta 120
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||| ||||| |||||||||||||||||||||| || |||||| |||||||||
Sbjct: 121 aatatacttttatgtatacatatagttttacatatttcacaa--tttttttaataagacg 178
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
| |||||||||||||||||||||||||| || |||||||||| ||||||||
Sbjct: 179 gacggtcaaacatgtgctaaaaagtcaacagtatcaaacatttagaaacgga 230
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
|||||||||||| |||||||||| || ||||||||||||| || | ||||| | | ||||
Sbjct: 234 tccctccgtttctaaatgtttgatactgttgactttttagcacatgtttgaccgtccgtc 175
Query: 81 ttattcaaaaaatt 94
||||| ||||||||
Sbjct: 174 ttattaaaaaaatt 161
Score = 58.0 bits (29), Expect = 7e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||| ||||||| ||||||||||| || | ||||||||||| | |||||| ||||
Sbjct: 77 atttttttaataagatgaatggtcaaatatatttaaaaaagtcaacagcgtcaaatattt 18
Query: 241 cgaaacggatggagtat 257
||||| ||||||||||
Sbjct: 17 agaaacagatggagtat 1
>RF01058;MIR806;AAAA02021826.1/21037-21276 39946:Oryza sativa Indica
Group
Length = 240
Score = 167 bits (84), Expect = 1e-40
Identities = 117/128 (91%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||| |
Sbjct: 101 tatcatttgattcattgttaaatatacttatatgtacacatatagttttacatgttttac 160
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 161 aaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagtcaagggtgtcaaata 220
Query: 238 tttcgaaa 245
||| ||||
Sbjct: 221 tttagaaa 228
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| |||| |||| |||| ||||||||| |||||||||||| || | ||||| ||||
Sbjct: 240 gtactcactccatttctaaatatttgacacccttgactttttagcacatgtttgaccatt 181
Query: 77 cgtcttattcaaaaa 91
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
>RF01058;MIR806;AC123517.2/46025-46260 39947:Oryza sativa Japonica
Group
Length = 236
Score = 167 bits (84), Expect = 1e-40
Identities = 156/181 (86%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 65 tatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtt 124
||||||| |||| ||||||| |||||||||||||||||||| | | || | ||
Sbjct: 48 tatttgaccatttatcttatt-aaaaaatttaagtaattattaattattttcctaccatt 106
Query: 125 tgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattt 184
||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||
Sbjct: 107 tgattcattgttaaatatacttatatgtatacatatagttttatatatttcataaaagtt 166
Query: 185 tttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaa 244
||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||
Sbjct: 167 tttgaataagacgaatggtcaaatatgtgctaaaaagtcaactgtgtcaaatatttagaa 226
Query: 245 a 245
|
Sbjct: 227 a 227
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
|||| |||| |||||||| ||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 227 tttctaaatatttgacacagttgactttttagcacatatttgaccattcgtcttattcaa 168
Query: 89 aaa 91
|||
Sbjct: 167 aaa 165
>RF01058;MIR806;AP008208.1/19468197-19467957 39947:Oryza sativa
Japonica Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
||||| |||||| |||| |||||| |||||||||||||| | | ||||| | || |||
Sbjct: 5 tcccttcgtttctaaatatttgacgccgttgactttttaaaatttgtttgaccgtttgtc 64
Query: 81 ttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaat 140
||||| |||||||||||||||||||| | | |||| ||| ||||||||||||||
Sbjct: 65 ttattaaaaaaatttaagtaattattaattattttcctatcatttaatttattgttaaat 124
Query: 141 atactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaat 200
||| || ||||| |||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 125 atatttatatgtatacatatagttttacatatttcacaaaagtttttgaataagacgaac 184
Query: 201 ggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
||||||||| |||||||||||| ||| | | ||| |||| |||||||||||||||
Sbjct: 185 ggtcaaacacgtgctaaaaagtaaacaatattaaatatttaaaaacggatggagtat 241
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||| |||||||| || ||||||||| | |||||||||||||| |||||| ||
Sbjct: 79 aaatttttttaataagacaaacggtcaaacaaattttaaaaagtcaacggcgtcaaatat 20
Query: 239 ttcgaaacg 247
|| ||||||
Sbjct: 19 ttagaaacg 11
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 52 actttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||| |||| ||||| | |||||||||||||||||
Sbjct: 206 actttttagcacgtgtttgaccgttcgtcttattcaaaaa 167
>RF01058;MIR806;AP008209.1/34389658-34389432 39947:Oryza sativa
Japonica Group
Length = 227
Score = 167 bits (84), Expect = 1e-40
Identities = 176/209 (84%)
Strand = Plus / Plus
Query: 32 caaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||||||| ||||||||||||| | ||||||| | |||||||||||||||||
Sbjct: 5 caaaatgtttgacgccgttgacttttttaaaaatatttgacctttcgtcttattcaaaaa 64
Query: 92 atttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatg 151
|||||||||||| || | |||| |||||||||||||||||||||| || ||
Sbjct: 65 atttaagtaattgttaattctttttctatcatttgatttattgttaaatatacatttata 124
Query: 152 tacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatg 211
|| ||||||||||||||| || ||| |||| ||||||||||| ||||| |||||||||||
Sbjct: 125 tatacatatagttttacacatatcacaaaagtttttgaataaaacgaacggtcaaacatg 184
Query: 212 tgctaaaaagtcaacggtgtcaaacattt 240
| |||||||||||||||||||||||||
Sbjct: 185 tttaaaaaagtcaacggtgtcaaacattt 213
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||| || | ||||||||||||| |||||||||
Sbjct: 68 aaattttttgaataagacgaaaggtcaaatatttttaaaaaagtcaacggcgtcaaacat 9
Query: 239 tt 240
||
Sbjct: 8 tt 7
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||||| || | ||||||||||||||||||||||||| || | ||||| | |||||
Sbjct: 227 ctccctcctttcctaaatgtttgacaccgttgacttttttaaacatgtttgaccgttcgt 168
Query: 80 cttattcaaaaa 91
|||||||||||
Sbjct: 167 tttattcaaaaa 156
>RF01058;MIR806;AAAA02017191.1/4530-4287 39946:Oryza sativa Indica
Group
Length = 244
Score = 165 bits (83), Expect = 4e-40
Identities = 163/192 (84%)
Strand = Plus / Plus
Query: 29 tttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaa 88
||||||||||||| || ||||||| ||||||| | | ||||| | || |||||||||||
Sbjct: 15 tttcaaaatgtttaacgccgttgattttttagcatatgtttgaccgtttgtcttattcaa 74
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
|||||||||||||||||| | |||| ||||||| ||||||||||||| |||
Sbjct: 75 aaaatttaagtaattattaattttttttctatcatttgattcattgttaaatatattttt 134
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
||||| ||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 135 atgtagacatataattttacatattttataaagttttttgaataagacgaatgatcaaac 194
Query: 209 atgtgctaaaaa 220
||||||||||||
Sbjct: 195 atgtgctaaaaa 206
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||||| || |||||||||| ||||||||| ||||||| || ||||||
Sbjct: 81 aaattttttgaataagacaaacggtcaaacatatgctaaaaaatcaacggcgttaaacat 22
Query: 239 ttcgaaa 245
|| ||||
Sbjct: 21 tttgaaa 15
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 54 tttttagtacgtatttgatcattcgtcttattcaaaaaa 92
||||||| || | ||||||||||||||||||||||||||
Sbjct: 206 tttttagcacatgtttgatcattcgtcttattcaaaaaa 168
>RF01058;MIR806;AACV01025602.1/829-590 39947:Oryza sativa Japonica
Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 113/123 (91%)
Strand = Plus / Plus
Query: 118 tatcgtttgatttattgttaaatatactttcatgtacacatatagttttacatatttcat 177
|||| ||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 101 tatcatttgattcattgttaaatatacttttatgtatacatatagttttatatatttcat 160
Query: 178 aaaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 161 aaaaatttttgaataagacgaatggtcaaacatgttttaaaaagtcaacgaggtcaaaca 220
Query: 238 ttt 240
|||
Sbjct: 221 ttt 223
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
||||||||||| ||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 223 aaatgtttgacctcgttgactttttaaaacatgtttgaccattcgtcttattcaaaaa 166
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa Indica
Group
Length = 250
Score = 165 bits (83), Expect = 4e-40
Identities = 113/123 (91%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || |
Sbjct: 116 tttgattcattgttaaatatactttcatgtacacgtatagttttacatatttcaagaatt 175
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| |
Sbjct: 176 ttttttaataagacgaacagttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 235
Query: 243 aaa 245
|||
Sbjct: 236 aaa 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
|||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 249 tactcccttcatttcaaaatgtttgacaccgttgactttttag 207
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaaca 209
||||| |||||||||||||||||||||
Sbjct: 77 ttttttaataagacgaatggtcaaaca 51
>RF01058;MIR806;CR855021.1/42350-42118 4530:Oryza sativa (rice)
Length = 233
Score = 165 bits (83), Expect = 4e-40
Identities = 192/229 (83%), Gaps = 10/229 (4%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||| ||| ||||||||||||||| ||||| |||| |||| ||||| |||||
Sbjct: 2 tactccatccctttcaaaatgtttgataccgtcgact-------acgtgtttgaccattc 54
Query: 78 gtcttattcaaaaaat-ttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||||||||| ||||||||||||||| ||||| ||||||| || |||
Sbjct: 55 gtcttattcaaaaaaaattaagtaattatttattctttttatatcatttgattcatggtt 114
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||| || |||||||||||||||||||| ||||||||| ||| |||||| ||||||||
Sbjct: 115 aaata--ctatcatgtacacatatagttttgcatatttcacaaattttttttaataagac 172
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
||| ||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct: 173 gaacggtcaaatatgtgctaaaaagttaacggtgtcaaacattttgaaa 221
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
||||| |||||||||||||||||||||| ||||||||| || ||||||| | ||||||||
Sbjct: 227 cctccatttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttcgtctt 168
Query: 83 attcaaaaaa 92
||| ||||||
Sbjct: 167 attaaaaaaa 158
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/76 (84%), Gaps = 7/76 (9%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||||||||||||||||||||||||| || |||| ||||| ||||||||||
Sbjct: 69 ttttttgaataagacgaatggtcaaacacgt-------agtcgacggtatcaaacatttt 17
Query: 242 gaaacggatggagtat 257
|||| |||||||||||
Sbjct: 16 gaaagggatggagtat 1
>RF01058;MIR806;AAAA02020686.1/40683-40933 39946:Oryza sativa Indica
Group
Length = 251
Score = 165 bits (83), Expect = 4e-40
Identities = 122/135 (90%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| ||||||||||||| ||| ||||| |||||| |||||||||||||||||||
Sbjct: 117 tttgattcattgttaaatatatttttatgtaggcatataattttacatatttcataaaag 176
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
|||| |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 177 ttttcgaataagacgaacggtcaaacatgtgctaaaaagtcaatggtgccaaacatttcg 236
Query: 243 aaacggatggagtat 257
||| ||| |||||||
Sbjct: 237 aaatggagggagtat 251
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| |||| ||||||||| |||| |||||||||||| || | ||||| | |||
Sbjct: 250 tactccctccatttcgaaatgtttggcaccattgactttttagcacatgtttgaccgttc 191
Query: 78 gtcttattcaaaaa 91
||||||||| ||||
Sbjct: 190 gtcttattcgaaaa 177
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 165 bits (83), Expect = 4e-40
Identities = 178/212 (83%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
|||| ||||| ||| |||||||||| || | ||||| | |||||||||||||||||||
Sbjct: 17 aaatatttgataccattgacttttttaaacctgtttgaccgttcgtcttattcaaaaaat 76
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
||||||||||||| | | |||| ||||||| ||||||||||||| ||| |||||
Sbjct: 77 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgta 136
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
|||||| ||||| |||||| | |||| ||||||||||||||||| ||| |||||||||
Sbjct: 137 ggcatataattttatatattttacaaaagtttttgaataagacgaacggttaaacatgtg 196
Query: 214 ctaaaaagtcaacggtgtcaaacatttcgaaa 245
|||||||||||||||| |||||||||| ||||
Sbjct: 197 ctaaaaagtcaacggtatcaaacattttgaaa 228
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
||||||| ||||||||||||||| |||||||||||||||| || | ||| | | ||||||
Sbjct: 236 tccctccatttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttcgtc 177
Query: 81 ttattcaaaaa 91
|||||||||||
Sbjct: 176 ttattcaaaaa 166
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||||| || |||||||||| ||| ||||| ||
Sbjct: 78 aaattttttgaataagacgaacggtcaaacaggtttaaaaaagtcaatggtatcaaatat 19
Query: 239 tt 240
||
Sbjct: 18 tt 17
>RF01058;MIR806;AAAA02013444.1/303-543 39946:Oryza sativa Indica
Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 193/232 (83%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| |||| |||| |||||| |||||||||||| || | |||||||||||
Sbjct: 2 tactccctccatttctaaatatttgacgtcgttgacttttttaaacatgtttgatcattc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
| ||||| |||||| | ||||||||||| | | |||| ||||||| |||||||
Sbjct: 62 attttattaaaaaaaatcaagtaattattaattattttcctatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||||||| ||||||| ||||||||||| |||||||| |||| ||||||||||| |||
Sbjct: 122 aatatacttttatgtacatatatagttttatatatttcacaaaagtttttgaataatacg 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
| |||| ||| |||||||||||| |||||| ||||||| |||| ||||||||
Sbjct: 182 actggttaaagatgtgctaaaaattcaacgatgtcaaatatttagaaacgga 233
Score = 48.1 bits (24), Expect = 7e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttc 241
|||||| ||||| | ||||| |||||||||| |||||||||||| |||||| ||||
Sbjct: 76 tttttttaataaaatgaatgatcaaacatgtttaaaaaagtcaacgacgtcaaatattta 17
Query: 242 gaaacggatggagtat 257
|||| ||| |||||||
Sbjct: 16 gaaatggagggagtat 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 25 tccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttat 84
|||||||| |||| ||||||| |||||| ||||||| || | ||| | || |||| ||||
Sbjct: 233 tccgtttctaaatatttgacatcgttgaatttttagcacatctttaaccagtcgtattat 174
Query: 85 tcaaaaa 91
|||||||
Sbjct: 173 tcaaaaa 167
>RF01058;MIR806;AAAA02023204.1/1421-1661 39946:Oryza sativa Indica
Group
Length = 241
Score = 163 bits (82), Expect = 2e-39
Identities = 156/183 (85%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||||| ||| ||||||||||||||||| |||||||||| | |||| ||||
Sbjct: 51 tttgatcgttcatcttattcaaaaaatttgagtaattattaattcttttactatcatttg 110
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||| |||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||
Sbjct: 111 attcattgttaaatgtacttatatgtacaagtatagttttacatatttcacgaaattttt 170
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
||||||| ||||||||||||||||||||||||||||||||||| ||||| | || |||||
Sbjct: 171 tgaataaaacgaatggtcaaacatgtgctaaaaagtcaacggtatcaaatacttagaaac 230
Query: 247 gga 249
|||
Sbjct: 231 gga 233
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
||||| ||||||||| || | ||||| |||||||||||||||| || | ||||| |||||
Sbjct: 240 tactctctccgtttctaagtatttgataccgttgactttttagcacatgtttgaccattc 181
Query: 78 gtcttattcaaaaaattt 95
|| |||||||||||||||
Sbjct: 180 gttttattcaaaaaattt 163
>RF01058;MIR806;AP008210.1/35216340-35216121 39947:Oryza sativa
Japonica Group
Length = 220
Score = 163 bits (82), Expect = 2e-39
Identities = 186/220 (84%), Gaps = 6/220 (2%)
Strand = Plus / Plus
Query: 30 ttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcattcgtcttattcaa 88
|||||||||||||| | |||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 6 ttcaaaatgtttgatatcgttgactttgtaagtacgtatttgaccattcgtcttattcaa 65
Query: 89 aaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttc 148
||||||||| | |||||| |||||| |||||||||||||||||||||||||
Sbjct: 66 aaaatttaact---tatttattcttttcatatcatttgatttattgttaaatatactttt 122
Query: 149 atgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaac 208
||||||||||||| ||||| ||||||||| | |||||| |||| |||||| ||| ||||
Sbjct: 123 atgtacacatataattttagatatttcat--attttttttaatacgacgaacggttaaac 180
Query: 209 atgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 248
||||| || ||||| |||| | ||||| |||| |||||||
Sbjct: 181 atgtgttataaagttaacgatatcaaatattttgaaacgg 220
Score = 61.9 bits (31), Expect = 4e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaaca 237
||||||||||||||||||||||||||||| | || | || |||||||||| | |||||||
Sbjct: 72 aaattttttgaataagacgaatggtcaaatacgtacttacaaagtcaacgatatcaaaca 13
Query: 238 ttt 240
|||
Sbjct: 12 ttt 10
>RF01058;MIR806;AAAA02028052.1/8526-8286 39946:Oryza sativa Indica
Group
Length = 241
Score = 163 bits (82), Expect = 2e-39
Identities = 138/159 (86%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||||||||||||||||| | | || | ||||||| ||||
Sbjct: 59 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctaccatttgattcattg 118
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||||||||||||| ||||| |||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 119 ttaaatatacttttatgtatacatatagctttacatatttcacaaaagtttttgaataag 178
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtca 233
||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 179 acgaatggtcaaacatgtgagaaaaagttaacggcgtca 217
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacat 210
||||||||||||||||||||| ||||||||||
Sbjct: 79 aaattttttgaataagacgaacggtcaaacat 48
>RF01058;MIR806;AP008207.1/17336421-17336659 39947:Oryza sativa
Japonica Group
Length = 239
Score = 163 bits (82), Expect = 2e-39
Identities = 157/183 (85%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||||| |||||||| || |||||||||||||||||||| | |||| ||||
Sbjct: 48 tttgatcgttcgtcttgtttaaaaaatttaagtaattattaattctttttctatcatttg 107
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaa-tttt 185
||| |||||||||||||||| |||||| | |||||||||||||||||||| |||| ||||
Sbjct: 108 attcattgttaaatatacttacatgtataaatatagttttacatatttcacaaaagtttt 167
Query: 186 ttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 245
|||||||||||||| ||||||||||||| |||||||| |||| ||||||| |||| ||||
Sbjct: 168 ttgaataagacgaacggtcaaacatgtgataaaaagttaacgatgtcaaatatttagaaa 227
Query: 246 cgg 248
|||
Sbjct: 228 cgg 230
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 26 ccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttatt 85
||||||| |||| ||||||| |||| |||||||| || | ||||| | |||||||||||
Sbjct: 230 ccgtttctaaatatttgacatcgttaactttttatcacatgtttgaccgttcgtcttatt 171
Query: 86 caaaaaa 92
|||||||
Sbjct: 170 caaaaaa 164
>RF01058;MIR806;AP008218.1/2341667-2341904 39947:Oryza sativa
Japonica Group
Length = 238
Score = 163 bits (82), Expect = 2e-39
Identities = 156/183 (85%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||| |||||||||||||||||||||||||| | | |||| |||||||||||
Sbjct: 56 ttcgtattattcaaaaaatttaagtaattattaattattttcctatcatttgatttatta 115
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||||||||| ||| ||||| |||||| ||||| |||||||| |||| ||||||||||||
Sbjct: 116 ttaaatatatttttatgtaggcatataattttatatatttcacaaaagtttttgaataag 175
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|| || ||| |||||| ||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 176 acaaacggttaaacatatgctaaaaagttaacggtgtcaaatatttcgaaacggagggag 235
Query: 255 tat 257
|||
Sbjct: 236 tat 238
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 237 tactccctccgtttcgaaatatttgacaccgttaactttttag 195
>RF01058;MIR806;AP005647.3/116663-116903 39947:Oryza sativa Japonica
Group
Length = 241
Score = 163 bits (82), Expect = 2e-39
Identities = 198/239 (82%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||||| | |||| ||||||||||||||||| || | | ||||| | |||
Sbjct: 2 tactccctccgtccctaaatatttgacaccgttgacttctttaagcatgtttgaccgttc 61
Query: 78 gtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtta 137
||||||||||||||||||||||||||||| | | |||| ||||||| |||||||
Sbjct: 62 gtcttattcaaaaaatttaagtaattattaattctttccctatcatttgattcattgtta 121
Query: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
|||||| ||| ||||| ||||||||||||| |||||||| ||| |||||||||||||||
Sbjct: 122 aatatatttttatgtatacatatagttttatatatttcacaaatttttttgaataagaca 181
Query: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
|| ||| |||||||| ||||||||||||| |||||| |||| | ||||||||||||
Sbjct: 182 aacggtgaaacatgttttaaaaagtcaacgacgtcaaatatttagggacggatggagta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 79 aaattttttgaataagacgaacggtcaaacatgcttaaagaagtcaacggtgtcaaatat 20
Query: 239 ttcgaaacggatggagtat 257
|| | ||||| |||||||
Sbjct: 19 ttagggacggagggagtat 1
>RF01058;MIR806;AACV01020600.1/2243-2008 39947:Oryza sativa Japonica
Group
Length = 236
Score = 163 bits (82), Expect = 2e-39
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaat 93
||||||||||| ||||||||||||| || | ||||| | || ||||||||||||||||
Sbjct: 18 aaatgtttgacgccgttgacttttttaaacatgtttgaccgtttgtcttattcaaaaaat 77
Query: 94 ttaagtaattatttannnnnnncatatcgtttgatttattgttaaatatactttcatgta 153
||||| ||||||| | | || | ||||||| ||||||||||||||||| |||||
Sbjct: 78 ttaagcaattattaatttatttcctaccatttgattcattgttaaatatacttttatgta 137
Query: 154 cacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgtg 213
||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 138 tacatatagttttatatatttcgcaaaagtttttgaataagacgaatggtcaaacatgtt 197
Query: 214 ctaaaaagtcaacggtgtcaaacattt 240
||||||||||||| |||||| ||||
Sbjct: 198 taaaaaagtcaacggcgtcaaatattt 224
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||
Sbjct: 79 aaattttttgaataagacaaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacat 20
Query: 239 tt 240
||
Sbjct: 19 tt 18
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 34 aaatgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaa 91
|||| |||||| ||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 224 aaatatttgacgccgttgacttttttaaacatgtttgaccattcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02002805.1/52701-52461 39946:Oryza sativa Indica
Group
Length = 241
Score = 161 bits (81), Expect = 6e-39
Identities = 198/234 (84%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagt-acgtatttgatcatt 76
|||| ||||||||| ||||||||||||| ||| |||||||| |||| ||||| ||||
Sbjct: 2 tacttcctccgttttaaaatgtttgacaa-gttaactttttaaacacgtgtttgaccatt 60
Query: 77 cgtcttattcaaaaaat-ttaagtaattatttannnnnnncatatcgtttgatttattgt 135
||||||||| |||||| ||||||||||||||| |||||| ||| ||| |||||
Sbjct: 61 cgtcttattaaaaaaaaattaagtaattatttatttttttcatatcatttaattcattgt 120
Query: 136 taaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataaga 195
|||||||||||||| || |||||||| |||| |||||| | ||| |||||| |||||||
Sbjct: 121 taaatatactttcacatatacatatagatttatatattttacaaattttttt-aataaga 179
Query: 196 cgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 249
|||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaaaagttaacggtgtcaaacattttaaaacgga 233
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 24 ctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctta 83
|||||||| |||||||||||||||||| ||||||||| || | ||||| | |||||||||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtctta 175
Query: 84 ttcaaaaaattt 95
|| |||||||||
Sbjct: 174 ttaaaaaaattt 163
Score = 50.1 bits (25), Expect = 2e-05
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatgtg-ctaaaaagtcaacggtgtcaaacattt 240
|||||| ||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 76 tttttttaataagacgaatggtcaaacacgtgtttaaaaagttaac-ttgtcaaacattt 18
Query: 241 cgaaacgga 249
|||||||
Sbjct: 17 taaaacgga 9
>RF01058;MIR806;AP004015.3/68995-68755 39947:Oryza sativa Japonica
Group
Length = 241
Score = 161 bits (81), Expect = 6e-39
Identities = 194/234 (82%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtc 80
|||||| ||||| |||| |||||| |||||||||||||| || | ||||| | ||||||
Sbjct: 5 tccctctgtttctaaatatttgacgccgttgactttttaaaacatgtttgaccgttcgtc 64
Query: 81 ttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaat 140
||||||||||| ||||||||||| || | |||| ||| ||| ||| ||||||
Sbjct: 65 ttattcaaaaattttaagtaattgttaatactttttctatcatttaattcattattaaat 124
Query: 141 atactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaat 200
||||||| || || ||||||| |||||||||||||| |||| ||||||||||||| ||||
Sbjct: 125 atacttttatatatacatataattttacatatttcacaaaagtttttgaataagatgaat 184
Query: 201 ggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
|||||||||| ||||||||||||||| ||||||| |||| |||| ||| ||||
Sbjct: 185 ggtcaaacatatgctaaaaagtcaacattgtcaaatatttagaaatggagggag 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||| |||||||||||| |||||||||||||| |||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgttttaaaaagtcaacggcgtcaaatatttag 16
Query: 243 aaac 246
||||
Sbjct: 15 aaac 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 20 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgt 79
|||||||| |||| |||| ||||||| ||||||||||||| | | ||||| ||||| |
Sbjct: 238 ctccctccatttctaaatatttgacaatgttgactttttagcatatgtttgaccattcat 179
Query: 80 cttattcaaaaa 91
||||||||||||
Sbjct: 178 cttattcaaaaa 167
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 161 bits (81), Expect = 6e-39
Identities = 161/190 (84%)
Strand = Plus / Plus
Query: 23 cctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattcgtctt 82
|||||||||||||||||||||||||||||||||||||| || | ||||| | ||||||||
Sbjct: 1 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtctt 60
Query: 83 attcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatat 142
||||||||| |||||||| ||||| | | |||| ||||||| ||||||||||||
Sbjct: 61 attcaaaaattttaagtagttattaattcttttcctatcatttgattcattgttaaatat 120
Query: 143 actttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatgg 202
| ||| ||||| |||||| |||||||||||| | |||| ||||||||| ||||||| ||
Sbjct: 121 atttttatgtaggcatataattttacatatttaacaaaagtttttgaatgagacgaacgg 180
Query: 203 tcaaacatgt 212
| ||||||||
Sbjct: 181 ttaaacatgt 190
Score = 117 bits (59), Expect = 8e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcg 242
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 69 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 10
Query: 243 aaacgga 249
|||||||
Sbjct: 9 aaacgga 3
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 161 bits (81), Expect = 6e-39
Identities = 196/234 (83%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 24 ctccgtttcaaaatgtttgacaccgttgact-ttttagtacgtatttgatcattcgtctt 82
||||||||| |||| ||| |||| ||||||| ||||| | ||||||| | ||||||||
Sbjct: 8 ctccgtttctaaatatttaacacagttgactcttttaaaatatatttgaccgttcgtctt 67
Query: 83 attcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaatat 142
||| |||||||| ||||||||||| | | |||| ||||||| || |||||||||
Sbjct: 68 attaaaaaaatt-aagtaattattaattattttcctatcatttgattcatggttaaatat 126
Query: 143 actttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatgg 202
| || ||||| |||||||||||||||||||||||||| |||||| | |||||| || |
Sbjct: 127 atttatatgtatacatatagttttacatatttcataaattttttttagtaagacaaacag 186
Query: 203 tcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagta 256
||||||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaatatttggaaacggagggagta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 240 tactccctccgtttccaaatatttgacaccgttgactttttag 198
Score = 46.1 bits (23), Expect = 3e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacatgtgctaaaa-agtcaacggtgtcaaacat 238
|||||||| ||||||||||| ||||||| || | ||||| ||||||| |||| ||| ||
Sbjct: 79 aatttttttaataagacgaacggtcaaatatattttaaaagagtcaactgtgttaaatat 20
Query: 239 ttcgaaacgga 249
|| ||||||||
Sbjct: 19 ttagaaacgga 9
>RF01058;MIR806;AP008214.1/2275873-2275633 39947:Oryza sativa
Japonica Group
Length = 241
Score = 161 bits (81), Expect = 6e-39
Identities = 156/182 (85%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
||||||||||| ||||| |||||||||||||| | | ||| ||||||||||||
Sbjct: 60 ttcgtcttattaaaaaattttaagtaattattgattcttttcctattatttgatttattg 119
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
||| |||||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 120 ttatatatacttatatgtatatatatagtttcacatatttcataaaagttttt-aataag 178
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggag 254
||||| ||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||
Sbjct: 179 acgaacggtcaaacatgtgctaaaaagtcaacggtatcaaatatttagaaacagatggag 238
Query: 255 ta 256
||
Sbjct: 239 ta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
||||||| || ||||| |||| ||||| |||||||||||||||| || | ||||| | ||
Sbjct: 241 gtactccatctgtttctaaatatttgataccgttgactttttagcacatgtttgaccgtt 182
Query: 77 cgtcttattcaaaa 90
||||||||| ||||
Sbjct: 181 cgtcttattaaaaa 168
>RF01062;MIR812;AAAA02017090.1/7592-7425 39946:Oryza sativa Indica
Group
Length = 168
Score = 159 bits (80), Expect = 2e-38
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 67 tttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttg 126
||||| |||||||||||||||||||||||||||||||||| | | ||| ||||
Sbjct: 155 tttgaccattcgtcttattcaaaaaatttaagtaattattaattcttttcttattatttg 96
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||| ||||||||||||||||| | ||| |||||||||||||||||||||| |||| ||||
Sbjct: 95 attcattgttaaatatacttttaggtatacatatagttttacatatttcacaaaagtttt 36
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaa 219
| ||||||||||||||||||||||||| |||||
Sbjct: 35 taaataagacgaatggtcaaacatgtggtaaaa 3
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 179 aaattttttgaataagacgaatggtcaaacat 210
||||||||||||||||||||||||||||||||
Sbjct: 127 aaattttttgaataagacgaatggtcaaacat 158
>RF01058;MIR806;AAAA02035816.1/5791-6029 39946:Oryza sativa Indica
Group
Length = 239
Score = 159 bits (80), Expect = 2e-38
Identities = 123/135 (91%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 123 tttgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaat 182
||||||| ||||||||||||||||| || || ||||||||||||||||||||||| |||
Sbjct: 106 tttgattcattgttaaatatacttttatatatacatatagttttacatatttcat--aat 163
Query: 183 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttc 241
||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 164 ttttttaataagacgaacggtcaaatatgtgcttaaaaagtcaacggtgtcaaacattta 223
Query: 242 gaaacggatggagta 256
|||||||| ||||||
Sbjct: 224 gaaacggagggagta 238
Score = 93.7 bits (47), Expect = 1e-18
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgacttttt-agtacgtatttgatcat 75
|||||||||||||||| ||||||||||||||||||||||||| || || ||||||| | |
Sbjct: 239 gtactccctccgtttctaaatgtttgacaccgttgactttttaagcacatatttgaccgt 180
Query: 76 tcgtcttattcaaaaaatt 94
|||||||||| ||||||||
Sbjct: 179 tcgtcttattaaaaaaatt 161
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 180 aattttttgaataagacgaatggtcaaacat 210
|||||||| ||||| ||||||||||||||||
Sbjct: 78 aatttttttaataaaacgaatggtcaaacat 48
>RF01058;MIR806;AP003928.3/135608-135368 39947:Oryza sativa Japonica
Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 150/173 (86%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 75 ttcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattg 134
|||||||||||||||||||||||||||||||| | | |||| ||||||||||||
Sbjct: 61 ttcgtcttattcaaaaaatttaagtaattattaatttttttc-tatcatttgatttattg 119
Query: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
|||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 120 ttaaatatacttatatgtatacatatagttttacatatttcataaaagtttttaaataag 179
Query: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacg 247
||||| || ||| ||||| |||||| |||||||||||||| |||| ||||||
Sbjct: 180 acgaacagttaaatatgtg-taaaaaatcaacggtgtcaaatatttagaaacg 231
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 179 aaattttttgaataagacgaatggtcaaacat 210
||||||||||||||||||||| ||||||||||
Sbjct: 81 aaattttttgaataagacgaacggtcaaacat 50
>RF01058;MIR806;AAAA02005830.1/14101-14346 39946:Oryza sativa Indica
Group
Length = 246
Score = 159 bits (80), Expect = 2e-38
Identities = 188/224 (83%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtatttgatcatt 76
|||||||| ||||| ||||||||| ||| ||||| |||| | ||||| ||||| ||||
Sbjct: 2 tactcccttcgttttaaaatgtttaacagtgttgatttttgaagtacgcgtttgaccatt 61
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
| | ||||| |||||||||||||||||||| | |||||| ||||||| || |||
Sbjct: 62 cattttatttaaaaaatttaagtaattattaattcttttcatatcatttgattcatggtt 121
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
||||||||||||||||| || |||||||||| |||||||||||| |||||| ||||||
Sbjct: 122 aaatatactttcatgtatacgtatagttttatatatttcataaattttttt--ataagat 179
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||| |||||||||| | |||||||||||||||||| ||||||||
Sbjct: 180 gaacggtcaaacatatactaaaaagtcaacggtgttaaacattt 223
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 30 ttcaaaatgtttgacaccgttgactttttagta 62
|||||||||||| ||||||||||||||||||||
Sbjct: 227 ttcaaaatgtttaacaccgttgactttttagta 195
>RF01058;MIR806;AP008216.1/8414462-8414224 39947:Oryza sativa
Japonica Group
Length = 239
Score = 159 bits (80), Expect = 2e-38
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 127 atttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttt 186
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 109 atttattgttaaatatacttttatgtatacatatagttttacatatttcataaaattttt 168
Query: 187 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
||||||||||||||| | |||||||| ||||||||||||| |||||||||
Sbjct: 169 tgaataagacgaatgattaaacatgtttaaaaaagtcaacggcgtcaaacat 220
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 36 atgtttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaattt 95
||||||||| ||||||||||||| || | ||| |||||||||||||||||||||||||
Sbjct: 220 atgtttgacgccgttgacttttttaaacatgtttaatcattcgtcttattcaaaaaattt 161
>RF01058;MIR806;AAAA02030555.1/1290-1052 39946:Oryza sativa Indica
Group
Length = 239
Score = 159 bits (80), Expect = 2e-38
Identities = 157/181 (86%), Gaps = 3/181 (1%)
Strand = Plus / Plus
Query: 65 tatttgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtt 124
||||||| ||||| ||||||| |||||||| ||||||||||| | | |||| ||
Sbjct: 50 tatttgaccattcatcttattaaaaaaatt-aagtaattattaattcttttcctatcatt 108
Query: 125 tgatttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattt 184
|||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 109 tgatttcttgttaaatatactttcatgtatacatatagttttacatatttcacaaatttt 168
Query: 185 tttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaa 244
||| ||||||||| | ||||||||| ||| |||||||||||||||||||||||||| |||
Sbjct: 169 tttaaataagacg-acggtcaaacacgtg-taaaaagtcaacggtgtcaaacatttagaa 226
Query: 245 a 245
|
Sbjct: 227 a 227
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttta 59
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 238 tactccctctatttctaaatgtttgacaccgttgacttttta 197
>RF01058;MIR806;AP001389.1/133839-133599 39947:Oryza sativa Japonica
Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 165/193 (85%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 21 tccctccgtttcaaaatgtttgacaccgttgactttttagta-cgtatttgatcattcgt 79
|||||||||| |||||| |||||| ||||||||||||| | | ||||||| |||||||
Sbjct: 5 tccctccgttccaaaatatttgacgccgttgactttttttaaacatatttgaccattcgt 64
Query: 80 cttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgttaaa 139
|||||| |||||| ||||||||||||| | | ||| |||||||||||||||||
Sbjct: 65 cttattaaaaaaaattaagtaattattaatttttttc-tattatttgatttattgttaaa 123
Query: 140 tatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacgaa 199
|||||||| ||||| |||||||||||||||||||||| ||| |||||| |||||||||||
Sbjct: 124 tatactttaatgtatacatatagttttacatatttcacaaatttttttaaataagacgaa 183
Query: 200 tggtcaaacatgt 212
||||||||||||
Sbjct: 184 cggtcaaacatgt 196
Score = 50.1 bits (25), Expect = 2e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 182 ttttttgaataagacgaatggtcaaacatg-tgctaaaaagtcaacggtgtcaaacattt 240
|||||| ||||||||||||||||||| ||| | ||||||||||||| |||||| ||||
Sbjct: 77 tttttttaataagacgaatggtcaaatatgtttaaaaaaagtcaacggcgtcaaatattt 18
Query: 241 cgaaacgga 249
| ||||||
Sbjct: 17 tggaacgga 9
>RF01058;MIR806;AC134230.2/30599-30357 39947:Oryza sativa Japonica
Group
Length = 243
Score = 159 bits (80), Expect = 2e-38
Identities = 200/241 (82%), Gaps = 16/241 (6%)
Strand = Plus / Plus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt---------agtacgtatt 68
|||||||||||||||||||||||| |||||||| | ||||| |||| || ||
Sbjct: 2 tactccctccgtttcaaaatgtttaacaccgttaattttttgattttttaagtatgtgtt 61
Query: 69 tgatcattcgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgat 128
| | ||||||||||||| ||||| |||||||||||||||| |||||| |||| |
Sbjct: 62 taaccattcgtcttatt-aaaaattttaagtaattatttatttttttcatatcatttgtt 120
Query: 129 ttattgttaaatatactttcatgtacacatatagttttacatatttcataaaattttttg 188
| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 tcattgttaaatatgttttcatgtacacatatagttttacatatttca-caaattttttt 179
Query: 189 aataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 248
||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 180 aataagacgaacg-----acatgtgctaaaaagtcaacggtatcaaacattttgaaacgg 234
Query: 249 a 249
|
Sbjct: 235 a 235
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttag 60
||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 242 tactctctccgtttcaaaatgtttgataccgttgactttttag 200
>RF01058;MIR806;AP008214.1/17994886-17994646 39947:Oryza sativa
Japonica Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 178/213 (83%)
Strand = Plus / Plus
Query: 17 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcatt 76
|||||| ||||||||| |||| |||||||||||||||||||| | | ||||| | ||
Sbjct: 1 gtactcactccgtttctaaatatttgacaccgttgacttttttaaatatgtttgaccgtt 60
Query: 77 cgtcttattcaaaaaatttaagtaattatttannnnnnncatatcgtttgatttattgtt 136
||||||||| ||||| ||||||||||||| | | ||| ||||||||||||||
Sbjct: 61 cgtcttattttaaaaaattaagtaattattaattcttttcctattatttgatttattgtt 120
Query: 137 aaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagac 196
|||||||||| ||||| ||||||||||||| |||||| |||||| ||||| ||||||||
Sbjct: 121 aaatatacttatatgtatacatatagttttatatattttataaaagtttttaaataagac 180
Query: 197 gaatggtcaaacatgtgctaaaaagtcaacggt 229
||||||||||| ||||||||| |||| ||||||
Sbjct: 181 gaatggtcaaatatgtgctaataagttaacggt 213
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 189 aataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 248
||||||||||| |||||||||| | |||||||||||||||||||| |||| |||||||
Sbjct: 69 aataagacgaacggtcaaacatatttaaaaaagtcaacggtgtcaaatatttagaaacgg 10
Query: 249 a 249
|
Sbjct: 9 a 9
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
|||||||||| ||| |||| | ||| |||||| |||| |||| || ||||||| |||||
Sbjct: 240 tactccctccattttcaaatatgtgataccgttaacttattagcacatatttgaccattc 181
Query: 78 gtcttattcaaaaa 91
|||||||| |||||
Sbjct: 180 gtcttatttaaaaa 167
