miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 287 bits (145), Expect = 4e-77
Identities = 215/238 (90%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttaactttttaatacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 tttattc-aaatcatttaagtaattatttattcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| |||||||||||||| |||||||||||||||||| || |||||||||||||| ||
Sbjct: 123 atatattttcatgtacacatatagttttacatatttcac-aatttttttgaataagatga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||| ||||||||||| |||||||| ||||||||| ||||
Sbjct: 182 acggtcaaatatgtgctaaaaaatcaacggtgtcgaacattttaaaacggaggaagta 239
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 169 tttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 228
||||||||| ||||| ||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 73 tttgaataaaacgaatggtcaaacacgtattaaaaagttaacggtgtcaaacattttgaa 14
Query: 229 acggagggagta 240
||||||||||||
Sbjct: 13 acggagggagta 2
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 281 bits (142), Expect = 2e-75
Identities = 216/239 (90%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
|||||||||||| ||||| |||||||||| |||||||||| |||||||| ||||||||||
Sbjct: 4 ctccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| |||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 tcttattc-aaaaaatttaagtaattatttattcttttcatatcatttgattcattgtta 122
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||||||||||||||| || ||||||||||||||| | ||| |||||| |||||| ||
Sbjct: 123 aatatactttcatgtacatatatagttttacatatttta-taaatttttttaataagtcg 181
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagagagta 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||| | ||| ||| || || |||||||||||||||||||| ||||
Sbjct: 77 ttttttgaataagacgaatgatcatacacgtacttaaaaagtcaacggtgtcaaatattt 18
Query: 225 tgaaacggagggagta 240
| ||||||||||||||
Sbjct: 17 taaaacggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 234 ctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttga 187
>RF01058;MIR806;AAAA02033862.1/6052-6288 39946:Oryza sativa Indica
Group
Length = 237
Score = 266 bits (134), Expect = 1e-70
Identities = 211/238 (88%), Gaps = 5/238 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||| |||| |||||||||||| |||||| ||||||||||||| | |||||||
Sbjct: 4 ctccctccgttacaaactgtttgacaccgttgacttcttagtacgtgttttaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 64 tttattaaaaaa-----aagtaattatttattcttttcaaatcatttgattcattgttaa 118
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||
Sbjct: 119 atatactttcatgtacacatatagttttacatgtttcacaaacttttttgaataagacga 178
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||
Sbjct: 179 acggtcaaacatgtgctaaaaagttaatggtgtcaaatattttgaaatagagggagta 236
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||| ||||| ||| ||||| || |||| ||||||||||||||||||| |||
Sbjct: 76 tttttttaataaaacgaatggtaaaacacgtactaagaagtcaacggtgtcaaacagttt 17
Query: 226 gaaacggagggagta 240
| |||||||||||||
Sbjct: 16 gtaacggagggagta 2
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 260 bits (131), Expect = 8e-69
Identities = 198/220 (90%), Gaps = 2/220 (0%)
Strand = Plus / Plus
Query: 22 tttgacaccgctgacttttta-gtacgtgtttgatcattcgttttattccnnnnnnntta 80
|||||||||| ||| |||||| |||||||||||| ||||||| |||||| |||
Sbjct: 25 tttgacaccgatgattttttaagtacgtgtttgaccattcgtcttattc-aaaaaattta 83
Query: 81 agtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacac 140
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 attaattatttattcttttcatatcatttgattcattgttaaatatactttcatgtacac 143
Query: 141 atgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgcta 200
|| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 144 atatagttttacatatttcataattttttttgaataagacgaacggtcaaacatgtgtta 203
Query: 201 aaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 aaaagtcaacggtgtcgaacattttgaaacggagggagta 243
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||| ||||||| |||||||||| || ||||||| | |||||
Sbjct: 241 ctccctccgtttcaaaatgttcgacaccgttgactttttaacacatgtttgaccgttcgt 182
Query: 63 tttattc 69
||||||
Sbjct: 181 cttattc 175
Score = 54.0 bits (27), Expect = 9e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacggtgtcaaa 219
|||||||||||||||||| ||||||||| || | |||||| ||| ||||||||||
Sbjct: 79 ttttttgaataagacgaatggtcaaacacgtacttaaaaaatcatcggtgtcaaa 25
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 260 bits (131), Expect = 8e-69
Identities = 206/232 (88%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||| ||||||||||| || | |||||||||||||||||||| |||||||||||||
Sbjct: 8 ctccgttttaaaatgtttgatacagttgactttttagtacgtgtttaatcattcgtttta 67
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
||| | |||||||||||||||||||| | ||||||||||| ||||||||||||
Sbjct: 68 ttc-aaaaaattaaagtaattatttattcttttcacatcatttgatttattgttaaatat 126
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
||||||||||||||| |||||||||||||||||| || ||||| ||||||| ||||||
Sbjct: 127 actttcatgtacacaaatagttttacatatttcacaaaaatttttaaataagatgaacgg 186
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggag 238
||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 187 tcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggag 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||| ||||| | | ||||| || ||||||||||||| || |||||||||||
Sbjct: 76 ttttttgaataaaacgaatgattaaacacgtactaaaaagtcaactgtatcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||| |||||
Sbjct: 16 aaaacggagagagta 2
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||||||||||||||| |||||||||| |||||||||||
Sbjct: 238 ctccctccgtttcaaaatatttgacaccgttgactttttag 198
>RF01058;MIR806;AP008211.1/2299532-2299770 39947:Oryza sativa
Japonica Group
Length = 239
Score = 260 bits (131), Expect = 8e-69
Identities = 208/235 (88%), Gaps = 7/235 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| ||||||||||| ||| |||||| |||||||| |||| || ||||| |||||||
Sbjct: 8 ctcccttcgtttcaaaatattttacaccgttgacttttcagtatgtatttgaccattcgt 67
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 tttattcaaa-------aaataattatttattcttttcatatcatttgattcattgttaa 120
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| |||||||||||||||||| || | |||||||||||||||
Sbjct: 121 atatactttcatgtacacatatagttttacatatttcacaaattattttgaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
| | ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 atgatcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggaggga 235
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 235 tccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttgatcattcgtc 176
Query: 64 ttattc 69
||||||
Sbjct: 175 ttattc 170
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||| ||||| ||||||| | | || ||||||||||||||| ||| |||||
Sbjct: 80 ttttttgaataaaacgaatggtcaaatacatactgaaaagtcaacggtgtaaaatatttt 21
Query: 226 gaaacggagggag 238
|||||| ||||||
Sbjct: 20 gaaacgaagggag 8
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 260 bits (131), Expect = 8e-69
Identities = 208/232 (89%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||| |||||||||||||| | |||||| |||||| |||||||| ||||||| ||||
Sbjct: 9 ccgttttaaaatgtttgacacagttgacttgttagtatgtgtttgaccattcgtcttat- 67
Query: 69 ccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatac 128
| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 68 ctaaaaaaagtaagtaattatttattctttttatatcatttgattcactgttaaatatac 127
Query: 129 tttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtc 188
|||||||||||||| |||||||||| |||||| ||| |||||| |||||||||||||||
Sbjct: 128 tttcatgtacacatatagttttacacatttca-taa-tttttttaataagacgaacggtt 185
Query: 189 aaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 237
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 235 ctccctccgtttcaaaatgtttgacaccgttgactttttagcacatgttt 186
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 174 ataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 232
|||||||||| ||||||||| | |||| |||||||| |||||||||||||| ||||||
Sbjct: 67 ataagacgaatggtcaaacacatactaacaagtcaactgtgtcaaacattttaaaacgg 9
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 260 bits (131), Expect = 8e-69
Identities = 156/163 (95%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 86 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatata 145
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 146 cacatatagttttacatatttcac-aaattttttgaataagacgaacggtcaaacatgtg 204
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 205 ctaaaaagttaacggtgtcaaatattttgaaacggagggagta 247
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| | ||||||||| || ||||||| | |||||
Sbjct: 245 ctccctccgtttcaaaatatttgacaccgttaactttttagcacatgtttgaccgttcgt 186
Query: 63 tttattc 69
||||||
Sbjct: 185 cttattc 179
Score = 60.0 bits (30), Expect = 2e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatt 223
||||||||||||||||| ||||||||| ||| |||||| |||||||||| |||||||
Sbjct: 76 tttttgaataagacgaatggtcaaacacatgcttaaaaaatcaacggtgttaaacatt 19
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 254 bits (128), Expect = 5e-67
Identities = 207/233 (88%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgactttttagcacgtgtttgaccattcgtcttat 68
Query: 68 tccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatata 127
|| |||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 69 tc-aaaaaatttaagtaattatttattcttttcatctcatctgattcattgttaaatata 127
Query: 128 ctttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggt 187
|||||||||||||| |||||||||||||||||| || |||||| | ||||| ||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcac-aatttttttaactaagatgaatggt 186
Query: 188 caaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 187 caaacatatgctaaaaagtcaacggcgtcaaacattttgaaacggagggagta 239
Score = 111 bits (56), Expect = 5e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaacgga 233
||||||||
Sbjct: 16 gaaacgga 9
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattc 60
||||||||||||||||||||||||| ||| ||||||||||| | ||||||| |||||
Sbjct: 237 ctccctccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccattc 180
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 252 bits (127), Expect = 2e-66
Identities = 201/227 (88%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||||||||| ||||||| || |||||||||| ||||||||||| ||||||| |||||
Sbjct: 8 ccgtttcaaaatatttgacatcgttgactttttaatacgtgtttgaccattcgtcttatt 67
Query: 69 ccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatac 128
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 68 --aaaaaaattaagtaattatttattcttttcatatcatttgattcattgttaaatatac 125
Query: 129 tttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtc 188
|||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct: 126 tttcatgtacacatatagttttacacatttcacaaacttttttgaataatacgaacggtc 185
Query: 189 aaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
||| || | |||||||||||| |||| |||||||||||||||||||
Sbjct: 186 aaatatttactaaaaagtcaatagtgtgaaacattttgaaacggagg 232
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| || ||||||||||||| ||||||| |||||
Sbjct: 74 tttttttaataagacgaatggtcaaacacgtattaaaaagtcaacgatgtcaaatatttt 15
Query: 226 gaaacgg 232
|||||||
Sbjct: 14 gaaacgg 8
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagta 45
||||||||||||||||||| |||| |||||||||||||
Sbjct: 232 cctccgtttcaaaatgtttcacactattgactttttagta 193
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 207/235 (88%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| ||||| || | ||| ||||||||| |||||||| |||||||
Sbjct: 4 ctccctccatttcaaaatatttgaaactgttgattttttagtatgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 64 cttattt-aaaaaatttaagtaattatttgttcttttcatatcatttgattcattattaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||||| |||||| |||||||| ||||||||| || |||||||||||||||||
Sbjct: 123 atatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 183 acggtcaaatatgtgctaaaaagtcaacagtgtcaaacattttgaaacggaggga 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| | ||||||| ||||| || ||||| |||||
Sbjct: 76 ttttttaaataagacgaatggtcaaacacatactaaaaaatcaacagtttcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||| ||||||||||
Sbjct: 16 gaaatggagggagta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
|||||||||||||||||||||||||| | ||||||||||| || | ||||| | |||||
Sbjct: 237 tccctccgtttcaaaatgtttgacactgttgactttttagcacatatttgaccgttcgtc 178
Query: 64 ttattc 69
||||||
Sbjct: 177 ttattc 172
>RF01058;MIR806;AAAA02036553.1/4131-3892 39946:Oryza sativa Indica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 208/235 (88%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||| |||||||||| ||||||| || | ||||||| |||||||||||| |||| |
Sbjct: 4 ctccctctgtttcaaaatatttgacatcgttaactttttggtacgtgtttgaccatttat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 64 cttattc-aaaaaatttaaataattatttattcttttcatatcatttgatttattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123 atatactttcatatacacatgtagttttacatatttcaccaacttttttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 183 acagtcaaagatgtgctaaaaagtcaacggtatcaaaca-tttgaaacggaggga 236
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| || ||||||||| || | ||||||| |||| ||||||| |||||
Sbjct: 76 ttttttgaataagataaatggtcaaacacgtaccaaaaagttaacgatgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
||||| |||||||||
Sbjct: 16 gaaacagagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 236 tccctccgtttcaaa-tgtttgataccgttgactttttag 198
>RF01058;MIR806;AAAA02018250.1/70399-70160 39946:Oryza sativa Indica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 209/238 (87%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||||||||||||| |||||||||| |||||||||||||||||||| | |||||||
Sbjct: 4 ctccatccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 64 cttatt--aaaaaaattaagtaactatttattctttttatatcatttgattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||| |||||||||| |||||||||||||||| | || |||||| | ||||||||
Sbjct: 122 atatacttttatgtacacatatagttttacatatttcgcaaattttttttattaagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| |||||||||||||||||| ||||||| | ||| |||||||||||||||||||||
Sbjct: 182 acagtcaaacatgtgctaaaacgtcaacgataccaaccattttgaaacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||| ||||| || |||||||||||||||||||||| |||||
Sbjct: 76 tttttttaataagacgaatggttaaacacgtactaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||| ||||||
Sbjct: 16 gaaacggatggagta 2
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 250 bits (126), Expect = 8e-66
Identities = 198/223 (88%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccnnnnn 75
|||||||||||||||| ||||||| |||||||||||||| ||||| | |||||
Sbjct: 18 aaaatgtttgacaccgttgactttctagtacgtgtttgaccattcatcctattc-aaaaa 76
Query: 76 nnttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatg 135
|||| ||| |||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 77 atttaaataactatttattattttcatatcatttgattcattgttaaatatactttcatg 136
Query: 136 tacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatg 195
||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||||
Sbjct: 137 tacacatatagttttacatatttcacaaacttttatgaataagacgaacggttaaacatg 196
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagggag 238
|| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 197 tgttaaaaagtcaacggtgttaaacattttgaaatggagggag 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||||| || ||| ||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 77 ttttttgaataggatgaatggtcaaacacgtactagaaagtcaacggtgtcaaacatttt 18
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 tgctccctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 241 tgctccctccatttcaaaatgtttaacaccgttgacttttta 200
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa Indica
Group
Length = 238
Score = 248 bits (125), Expect = 3e-65
Identities = 196/220 (89%), Gaps = 4/220 (1%)
Strand = Plus / Plus
Query: 11 gtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattcc 70
|||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||
Sbjct: 12 gtttcaaaatgtttgacatcgttgactttttagtacgtgtttgaccattcgttttattc- 70
Query: 71 nnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatactt 130
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 71 aaaaaatttaagtaattatttattccttttatatcatttgattcattgttaaatatactt 130
Query: 131 tcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaa 190
|||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||||
Sbjct: 131 tcatgtacacatatagttttatatatttcac---atttttttaataagacgaatggtcaa 187
Query: 191 acatgtgctaaaaagtcaacggtgtcaaacattttgaaac 230
||||||| |||||||| |||||||| ||||||||| ||||
Sbjct: 188 acatgtgttaaaaagtgaacggtgtgaaacattttaaaac 227
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||| ||||| ||||||||| || |||||||||||||| |||||||||||||
Sbjct: 76 ttttttgaataaaacgaatggtcaaacacgtactaaaaagtcaacgatgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
||||| || ||||||
Sbjct: 16 gaaactgatggagta 2
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 248 bits (125), Expect = 3e-65
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgtttactttttagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||| ||||||||||| |||| |||| |||||||||||||||||
Sbjct: 64 cttattc-aaaaaatttaacaaattatttattattttcatattatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||||||||| || | |||||||||||||||| | |||||||||||||||||
Sbjct: 123 atatactttcatgtacaaatatggttttacatatttcacaattttttttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 183 atggtgaaacatgtgctaaaaagtgaacggtgcataacattttgaaacggagggagta 240
Score = 117 bits (59), Expect = 7e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacgtactaaaaagtaaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||| ||||| | ||||||||| || ||||| | |||||||
Sbjct: 238 ctccctccgtttcaaaatgttatgcaccgttcactttttagcacatgtttcaccattcgt 179
Query: 63 tttattc 69
||||||
Sbjct: 178 cttattc 172
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 248 bits (125), Expect = 3e-65
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| ||||||||||||||| ||||||||||| || ||||| | | |||||
Sbjct: 4 ctccctccgttttgaaatgtttgacaccgttgactttttagcacatgtttaaccgttcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| ||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 64 cttattc-aaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||||||||| ||| || ||||||||||||||| || ||||||||||||||||
Sbjct: 123 atatattttcatgtaggcatataattttacatatttcacaaaaatttttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 240
Score = 125 bits (63), Expect = 3e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 76 ttttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttc 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||||||||||||||| ||||||||||| || ||||||| | |||||
Sbjct: 238 ctccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgt 179
Query: 63 tttattc 69
||||||
Sbjct: 178 cttattc 172
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 246 bits (124), Expect = 1e-64
Identities = 205/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
|||||||||||||||| ||||||| ||| ||||||| ||||||||| |||||| ||||||
Sbjct: 9 tccgtttcaaaatgttagacaccgttgattttttagcacgtgtttggtcattcattttat 68
Query: 68 tccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatata 127
| |||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 69 ta-aaaaaatttaagtaattatttattcttttaatatcatttgattcattcttaaatata 127
Query: 128 ctttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggt 187
|||||||||||||| |||||||||||||||||| | |||||| ||||||| ||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcacaatttttttttaataagatgaatggt 187
Query: 188 caaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 188 taaacatgagctaaaaagtcaacggtgacaaacattttgaaacggagggagta 240
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 188 caaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 233
|||||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 54 caaacacgtgctaaaaaatcaacggtgtctaacattttgaaacgga 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 238 ctccctccgtttcaaaatgtttgtcaccgttgactttttag 198
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 244 bits (123), Expect = 5e-64
Identities = 202/227 (88%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
||||||||||||||||||||||||| |||| |||||||| || ||| | |||| |||||
Sbjct: 8 ctccgtttcaaaatgtttgacaccgttgacattttagtatgtatttaaccatttatttta 67
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
|| |||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 68 tta-aaaaaatttaagtaattatttattcttttcatat-atttgattcattgttaaatat 125
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||| ||
Sbjct: 126 actttcatgtacacatgtagttttacatatttcacaaa--ttttttaataagatgaatgg 183
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 233
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 230
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattc 60
|||||||||||||||||||||||| ||||||||||| || ||||||| |||||
Sbjct: 230 tccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccattc 178
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 44 ctaaaatgtcaacggtgtcaaacattttgaaacggagtgagta 2
>RF01058;MIR806;AP005878.2/90818-90583 39947:Oryza sativa Japonica
Group
Length = 236
Score = 244 bits (123), Expect = 5e-64
Identities = 203/228 (89%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 11 gtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattcc 70
||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 12 gtttcaagatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttatta- 70
Query: 71 nnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatactt 130
||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 71 aaaaaatttaagaaattatttatt-ttttcatatcatttgatttattgttaaatatactt 129
Query: 131 tcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaa 190
|||||||||||| |||||||| ||||||||| || |||||| |||||||||||||||| |
Sbjct: 130 tcatgtacacatatagttttatatatttcacaaattttttttaataagacgaacggtc-a 188
Query: 191 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggag 238
||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 189 acatgtgctaaaaagtcaacggtgtcaaatattttgaaacggatggag 236
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 76 tttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacatctt 17
Query: 226 gaaac 230
|||||
Sbjct: 16 gaaac 12
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 236 ctccatccgtttcaaaatatttgacaccgttgactttttag 196
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 242 bits (122), Expect = 2e-63
Identities = 209/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcgt 62
|||||||||||| ||||||||||||||| |||||||||| ||| |||||||| | |||||
Sbjct: 5 tccctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgt 64
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||||| |||| ||||||||| ||| || |||||
Sbjct: 65 cttatttaaaaaaagttaagtaattatttatttttttcatatcatttaattaatcgttaa 124
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||| |||||||||||||||| |||||||||||||||||| || ||||| ||||||| ||
Sbjct: 125 ataaactttcatgtacacatatagttttacatatttcacaaatttttt--aataagaaga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 183 acggtcaaacatgtgctaaaaagtcaacggagtcaaacattttgaaacggagggagta 240
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 77 ttttttaaataagacgaacggtcaaacacttacttaaaaagtcaacggtgtcaaacattt 18
Query: 225 tgaaacggaggga 237
||||||||||||
Sbjct: 17 cgaaacggaggga 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||||||||||||||| ||| ||||||||||| || |||||||
Sbjct: 238 ctccctccgtttcaaaatgtttgactccgttgactttttagcacatgtttga 187
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 240 bits (121), Expect = 7e-63
Identities = 207/234 (88%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| | |||||||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 4 ctcccttcatttcaaaatgtttgacaccgttcactttttagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 cttattc-aacaaatttaagtaattatttattctttt-atatcatttgattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| |||||||||||||| |||||||||||||||||| || |||||| ||||||||||
Sbjct: 122 atatattttcatgtacacatatagttttacatatttcac-aattttttttaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggg 236
||||| |||||| | ||||||||| |||||| ||||| |||||||| |||||||
Sbjct: 181 acggttaaacatatactaaaaagttaacggtatcaaatattttgaagcggaggg 234
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 170 ttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
|||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacacgtactaaaaagtgaacggtgtcaaacattttgaaa 13
Query: 230 cggagggagta 240
| ||||||||
Sbjct: 12 tgaagggagta 2
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 240 bits (121), Expect = 7e-63
Identities = 209/238 (87%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||| ||| | ||||||||||| |||||||| ||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacgccgttaactttttagtatgtgtttgactattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 64 cttatta-aaaaaatttaagtaattatttaatctttttatatcatttgattcattgttta 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| |||||||||||||| ||||||||||||||| | ||| |||||| ||||||||||
Sbjct: 123 atatattttcatgtacacatatagttttacatatttta-taaatttttttaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||| ||||||||||||||| ||||||||| || ||||||||| ||||||||||||||
Sbjct: 182 acggccaaacatgtgctaaagagtcaacggcgttaaacattttaaaacggagggagta 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||| | ||||||||| ||||| ||||||||||||
Sbjct: 76 tttttttaataagacgaatagtcaaacacatactaaaaagttaacggcgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttg 53
|||||||||||| ||||||||| || ||| ||||| ||||| || ||||||
Sbjct: 237 ctccctccgttttaaaatgtttaacgccgttgactctttagcacatgtttg 187
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 200/227 (88%), Gaps = 3/227 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| ||||| |||| |||||||||||||| ||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatatttgataccgttgactttttagtacatgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 64 cttatt--aaaaaatttaagtaattatttattcttttcatattatttgattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||| |||||||| |||||||||||||||||| || |||||| ||||||||||
Sbjct: 122 atatactttcaagtacacatatagttttacatatttcac-aattttttttaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
||||||||| || ||||||||||||||| | || |||||||||||||
Sbjct: 181 acggtcaaatatatgctaaaaagtcaactgcgttaaacattttgaaa 227
Score = 107 bits (54), Expect = 7e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| ||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||
Sbjct: 75 ttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatattttg 16
Query: 227 aaacggagggagta 240
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 236 bits (119), Expect = 1e-61
Identities = 152/163 (93%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 81 ttaagtaattatttattcttttcatatcatttgattcattgtaaaatatattttcatgta 140
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| || ||||||||||||||| || || | ||||||||||||| ||||||||||||||||
Sbjct: 141 catatatagttttacatattttacaaattattttgaataagacaaacggtcaaacatgtg 200
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ctaaaaagtcaacggtgtcaaacattttgaaacggatggagta 243
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||| |||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 241 ctccatccgtttcaaaatgtttgacaccgttgactttttagcacatgtttga 190
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc-aacggtgt 215
|||||| ||||||||||| ||||||||| || ||||||||| ||||||||
Sbjct: 79 tttttttaataagacgaatggtcaaacacgtaataaaaagtctaacggtgt 29
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 234 bits (118), Expect = 5e-61
Identities = 208/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||| |
Sbjct: 4 ctccctccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccattcat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 64 cttattc-aaaaagtttaagtaattatttattcttttcatatcatttaattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||||||||||| || |||||||||||||||||| | |||| ||||||||||
Sbjct: 123 atatactttcatgtacaca--taattttacatatttcactaattattttaaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| ||| ||| |||||||||||| | |||||||||||| ||||| |||||||| |||||
Sbjct: 181 atggttaaatatgtgctaaaaaattaacggtgtcaaatattttaaaacggagtgagta 238
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||||||||||| ||| ||| ||||| || |||||||||||||||||||||| ||||||
Sbjct: 75 tttttgaataagatgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttg 16
Query: 227 aaacggagggagta 240
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 234 bits (118), Expect = 5e-61
Identities = 190/214 (88%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 22 tttgacaccgctgactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaa 81
|||||||||| |||||||||| ||||||||||| ||||||| ||||| ||||
Sbjct: 23 tttgacaccgttgactttttaatacgtgtttgaccattcgtcttattt-aaaaaatttaa 81
Query: 82 gtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacaca 141
||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ataattatttatcctcttcatatcatttgattcattgttaaatatactttcatgtacaca 141
Query: 142 tgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaa 201
| |||||||||||||||||| | |||||| ||||||| || ||||||||||||||||||
Sbjct: 142 tatagttttacatatttcac--aatttttttaataagatgagcggtcaaacatgtgctaa 199
Query: 202 aaagtcaacggtgtcaaacattttgaaacggagg 235
||||||||||||||||||||||||||||||||||
Sbjct: 200 aaagtcaacggtgtcaaacattttgaaacggagg 233
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 233 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttga 185
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaa 219
|||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 76 ttttttaaataagacgaatggtcaaacacgtattaaaaagtcaacggtgtcaaa 23
>RF01058;MIR806;AL606588.4/5999-5762 4530:Oryza sativa (rice)
Length = 238
Score = 234 bits (118), Expect = 5e-61
Identities = 206/234 (88%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||||||||||||||||||| || |||| ||||||||||||| |||| || |||
Sbjct: 8 ctccgtttcaaaatgtttgacaccacttt-ttttaagtacgtgtttgaccatttgtctta 66
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
|| |||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 67 tttaaaaaaaactaagtaattatttatt-tttttatattatttgattcattgttaaatat 125
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
|||||||||||||||| |||||||| ||||||||| | |||||| ||||||||||||||
Sbjct: 126 actttcatgtacacatatagttttatatatttcacaa--tttttttaataagacgaacgg 183
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 184 tcaaacatatgctaaaaagtcaacggtgtcaaatattttgaaacggagggagta 237
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| ||||||||||| | ||||||| | |||||
Sbjct: 235 ctccctccgtttcaaaatatttgacaccgttgactttttagcatatgtttgaccgttcgt 176
Query: 63 tttatt 68
|||||
Sbjct: 175 cttatt 170
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 211 ggtgtcaaacattttgaaacggag 234
||||||||||||||||||||||||
Sbjct: 31 ggtgtcaaacattttgaaacggag 8
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 234 bits (118), Expect = 5e-61
Identities = 208/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttattacgtgtttgactattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| ||| |||| ||| ||||||||
Sbjct: 64 cttatt--aaaaaaattaagtaattatttattcttttcatacaatttaatttattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| || ||||||||||||||| || |||||||||||||||||
Sbjct: 122 atatactttcatgtacacatataattttacatatttcac-aaattttttgaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||| ||||||||| |||||||| ||| ||||| ||||||| ||||||
Sbjct: 181 acggtcaaatatgtactaaaaagttaacggtgttaaatattttaaaacggatggagta 238
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 76 tttttttaataagacgaatagtcaaacacgtaataaaaagtcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||||||| ||||| ||| |||||| | |||||||||||| | ||||| | |||||
Sbjct: 236 ctccatccgttttaaaatatttaacaccgttaactttttagtacatatttgaccgttcgt 177
Query: 63 tttattc 69
||||||
Sbjct: 176 cttattc 170
>RF01058;MIR806;AAAA02006511.1/7100-6860 39946:Oryza sativa Indica
Group
Length = 241
Score = 232 bits (117), Expect = 2e-60
Identities = 207/236 (87%), Gaps = 5/236 (2%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| |||
Sbjct: 8 ctccgtttcaaaatgtttggcaccgttggctttttagtacgtgtttgatcattcgtctta 67
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 68 ttc-aaaaattttaagtaattatttattcttttcatatcatttgatttattgttaaatat 126
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
|||||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||
Sbjct: 127 actttcatgtacacatatagttttacatatttcac--aatttttttaataagacgaacgg 184
Query: 187 tcaaacatgtgc--taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||| | |||||| |||| ||| | ||||||||| |||||||| |||||
Sbjct: 185 ttaaacatgtactttaaaaaatcaatggtattaaacattttaaaacggagcgagta 240
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||||||||||||||| | ||||||| || |||||||| |||||||| |||||||||||
Sbjct: 75 tttttgaataagacgaatgatcaaacacgtactaaaaagccaacggtgccaaacattttg 16
Query: 227 aaacggagggagta 240
|||||||| |||||
Sbjct: 15 aaacggagcgagta 2
>RF01058;MIR806;AAAA02025675.1/1048-809 39946:Oryza sativa Indica
Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 208/238 (87%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||| | ||||||| ||||||| |||||
Sbjct: 64 cttattc-aagaaatttaagtaattatttattcttatcgtatcattagattcatggttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| |||| | ||||||| ||| || ||| | |||||||||
Sbjct: 123 atatactttcatgtacacatatagtgtaacatattccac-aaatttgtgtcataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 170 ttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
|||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaa 13
Query: 230 cggagggagta 240
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 237 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacattcgt 178
Query: 63 tttat 67
||||
Sbjct: 177 cttat 173
>RF01058;MIR806;AAAA02018369.1/11191-11429 39946:Oryza sativa Indica
Group
Length = 239
Score = 232 bits (117), Expect = 2e-60
Identities = 209/238 (87%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||| | |||| |||||||||||||||||||| | ||||| |
Sbjct: 4 ctccctccgtttcaaaatgtttcaaaccgttgactttttagtacgtgttttaccattcat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| ||||| |||||||||||||||| ||||||||||| ||||||||||
Sbjct: 64 cttattcaaaaaaatttaaggaattatttattcttttcatatcatttgaatcattgttaa 123
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||||| |||||| |||||| ||||| ||||| || |||||| |||||||||
Sbjct: 124 atatactttcatgcacacatatagtttcacata-ttcac-aaattttttttataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct: 182 acggtcaaacatgtgctaaaaa-tcaatggtgtcaaacattttgaaacgaagggagta 238
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| ||| ||||| || |||||||||||||||| | |||||||||
Sbjct: 76 ttttttgaataagatgaatggtaaaacacgtactaaaaagtcaacggtttgaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| ||||||||||||||||||||| ||| ||||||| || ||||||| | |||||
Sbjct: 236 ctcccttcgtttcaaaatgtttgacaccattga-tttttagcacatgtttgaccgttcgt 178
Query: 63 tttat 67
||||
Sbjct: 177 cttat 173
>RF01058;MIR806;AC087552.3/52194-51954 39947:Oryza sativa Japonica
Group
Length = 241
Score = 232 bits (117), Expect = 2e-60
Identities = 207/238 (86%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| ||||||||||| |||||||||| | |||||| |||| |||||||| ||| ||
Sbjct: 4 ctccctacgtttcaaaatatttgacaccgttaacttttcagtatgtgtttgacaatttgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 64 cttattcaaaaaaatttaagtaattatttattctttttatatcatttgattcgttgttaa 123
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||| |||||||||| |||||||| ||||||||| || |||||| ||||||||||
Sbjct: 124 atatacttttatgtacacatatagttttatatatttcac-aattttttttaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 183 acagtctaacatgtactaaaaagtcaacggtgtcaagtattttaaaacggagggagta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||||||||| || |||||||| | || |||||| |||||||||||| |||||
Sbjct: 76 ttttttgaataagacaaattgtcaaacacatactgaaaagttaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||| ||||||||
Sbjct: 16 gaaacgtagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtt 51
|||||||||||| ||||| ||||||||| |||||||||||||| ||||
Sbjct: 238 ctccctccgttttaaaatacttgacaccgttgactttttagtacatgtt 190
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 232 bits (117), Expect = 2e-60
Identities = 186/210 (88%), Gaps = 1/210 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| |||||||||| ||| |||||||||||||||
Sbjct: 4 ctccctccgtttcaaaatatttgacaccgttgactttttaatacatgtttgatcattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 64 cttattc-aaaaaatttaagtaattatttattcttttcatatcatttgatttattattaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||||| |||||| |||||||| ||||||||| || ||||||||||||||| |
Sbjct: 123 atatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagacaa 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacgg 212
||||||||||||||| |||||||| |||||
Sbjct: 183 acggtcaaacatgtgttaaaaagttaacgg 212
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||||
Sbjct: 76 ttttttgaataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AAAA02000035.1/1574-1333 39946:Oryza sativa Indica
Group
Length = 242
Score = 232 bits (117), Expect = 2e-60
Identities = 189/214 (88%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatatttgacaccgttgactttatagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 cttattc-agaaaatttaagtaattatttattcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||| |||||||| ||||||||| |||||||| | || | | |||||||||
Sbjct: 123 atatactttcacgtacacatatagttttacctatttcacgattttctctcgataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtc 216
|||||||||||||||||||| |||||||||||||
Sbjct: 183 acggtcaaacatgtgctaaatagtcaacggtgtc 216
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||| ||||||||||||| ||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 76 ttttctgaataagacgaatggtcaaacacgtactataaagtcaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 230 bits (116), Expect = 7e-60
Identities = 198/224 (88%), Gaps = 4/224 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
||||||||||||||||| |||| ||||| |||||||||| |||||| ||||| ||||||
Sbjct: 4 ctccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| ||||| |||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 64 tcttattt-aaaaaatttaagtaattatttattcttttcatatcatttaattcattgtta 122
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||
Sbjct: 123 aatatactttcatgtacacatatagttttacatatttcac--aatttttttaataagaca 180
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 224
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||||||| ||||||| | || || ||||||||||||||| |||| |||
Sbjct: 77 ttttttaaataagacgaatggtcaaatacgtacttaaaaagtcaacggtgccaaatgttt 18
Query: 225 tgaaacggagggagta 240
||||||||||||||||
Sbjct: 17 tgaaacggagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 16 aaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||||||||||||| ||||||||||| || ||||||| |||| || |||||
Sbjct: 224 aaaatgtttgacaccgttgactttttagcacatgtttgaccatttgtcttatt 172
>RF01058;MIR806;AAAA02006724.1/5899-5657 39946:Oryza sativa Indica
Group
Length = 243
Score = 230 bits (116), Expect = 7e-60
Identities = 209/240 (87%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||| |||| | ||||||| |||||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttaacactgttgactttctagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnn--ttaagtaattatttattctttttatatcatttgattcattgtt 120
|||||| |||| |||||| ||||| |||||||||||||||||| ||||||
Sbjct: 64 cttattcaaaaatttaattaattaattaattattttttttatatcatttgatttattgtt 123
Query: 121 aaatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagac 180
|||| ||||||||||||||||| ||||||||||||||| || || |||||| ||||||||
Sbjct: 124 aaatgtactttcatgtacacatatagttttacatattttac-aattttttttaataagac 182
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| |||||||||||||||||||||||||| |||| |||| | ||||||||
Sbjct: 183 gaacggtcaaacctgtgctaaaaagtcaacggtgtcaaatatttcgaaatgaagggagta 242
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||||||||||||||| ||||||||| || ||| ||||||||| |||| ||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactagaaagtcaacagtgttaaacattttg 16
Query: 227 aaacggagggagta 240
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| | |||| |||| |||||||||| ||||||||||| || |||||| | |||||
Sbjct: 240 ctcccttcatttcgaaatatttgacaccgttgactttttagcacaggtttgaccgttcgt 181
Query: 63 tttatt 68
|||||
Sbjct: 180 cttatt 175
>RF01058;MIR806;AP008217.1/20608272-20608042 39947:Oryza sativa
Japonica Group
Length = 231
Score = 230 bits (116), Expect = 7e-60
Identities = 192/217 (88%), Gaps = 2/217 (0%)
Strand = Plus / Plus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 1 ccgttttaaaatatttgacaccgttgactttttagtacgtgtttgaccattcgtcttatt 60
Query: 69 ccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatac 128
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 a-aaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatac 119
Query: 129 tttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtc 188
||||||||| |||| || |||||||||||| | ||| |||||| ||||||||||| ||||
Sbjct: 120 tttcatgtatacatataattttacatatttta-taattttttttaataagacgaatggtc 178
Query: 189 aaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||| |||||| ||||||||||||||||||||
Sbjct: 179 aaacatgtgttaaaaattcaacggtgtcaaacatttt 215
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| || |||||||||||||||||||||| |||||
Sbjct: 67 tttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaatatttt 8
Query: 226 gaaacgg 232
||||||
Sbjct: 7 aaaacgg 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 16 aaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||||||||||||| ||| |||||| || ||||||| ||||||| |||||
Sbjct: 215 aaaatgtttgacaccgttgaatttttaacacatgtttgaccattcgtcttatt 163
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 228 bits (115), Expect = 3e-59
Identities = 152/163 (93%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttaagtaactatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| ||| ||||||||||||||||| || |||||| ||||||||||||||| ||| || ||
Sbjct: 138 cccatatagttttacatatttca-tagatttttttaataagacgaacggttaaatatatg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 197 ctaaaaagtcaacggtgtcaaacattttgaaacggaaggagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 169 tttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 73 tttgaatgagaagaacggtcaaacatattttaaaaagtcaacggtgtcaaacattt 18
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||| |||||||||||||||||||||||| |||||||||||
Sbjct: 237 ctccttccgtttcaaaatgtttgacaccgttgactttttag 197
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 228 bits (115), Expect = 3e-59
Identities = 191/215 (88%), Gaps = 4/215 (1%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcgttttattccnnnn 74
|||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||
Sbjct: 18 aaaatgtttgacaccgttgactttttaagtacgtgtttgaacattcgtcttattc-aaaa 76
Query: 75 nnnttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcat 134
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 77 aatttaagtaattatttattctttttatacaatttgattcattgttaaatatactttcat 136
Query: 135 gtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacat 194
|||| ||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 137 gtacgcatatagttttacatatttcacaaacttttt--aataagacgaacggttaaacat 194
Query: 195 gtgctaaaaagtcaacggtgtcaaacattttgaaa 229
||||||||||||||||| | ||||| |||| ||||
Sbjct: 195 gtgctaaaaagtcaacgttatcaaatatttcgaaa 229
Score = 73.8 bits (37), Expect = 1e-12
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||| | ||||||| || || |||||||||||||||||||||||||
Sbjct: 78 ttttttgaataagacgaatgttcaaacacgtacttaaaaagtcaacggtgtcaaacattt 19
Query: 225 t 225
|
Sbjct: 18 t 18
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 228 bits (115), Expect = 3e-59
Identities = 207/236 (87%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
|||||||||||| |||||||||||||||| | | |||||| |||| ||||||| ||||||
Sbjct: 4 ctccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
|||||||| |||||||||||||||||||||| ||||||||||||| ||| |||
Sbjct: 64 ttttattc-aaaaaatttaagtaattatttattcttttcatatcatttgatttattatta 122
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
||||||||||||| ||||||| |||||||||||||||||| ||||||||| | |||||||
Sbjct: 123 aatatactttcatatacacatatagttttacatatttcacaaactttttttattaagacg 182
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||||||||| ||||||||| |||||||||| ||| | ||||||||| |||||
Sbjct: 183 aacggtcaaacatatgctaaaaaatcaacggtgttaaata-tttgaaacgaaggga 237
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||||||||| ||||| |||||||||||| || ||||| | |||||||||||||||||
Sbjct: 77 ttttttgaataaaacgaatggtcaaacatgtacttaaaaaattaacggtgtcaaacattt 18
Query: 225 tgaaacggagggagta 240
| ||||||||||||||
Sbjct: 17 taaaacggagggagta 2
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 228 bits (115), Expect = 3e-59
Identities = 152/163 (93%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 82 ttaagtcattatttattcttttcatatcatttgattcatttttaaatatactttcatgca 141
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||||||||||||| || |||||| ||||||||||||||||||| |||||
Sbjct: 142 cacatatagttttacatatttcacaaaatttttt-aataagacgaacggtcaaatatgtg 200
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 201 ctaaaaagttaacggtgtcaaacattttgaaacggatggagta 243
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 198 ctaaaaagtcaacggtgtcaaacattttga 227
||||||||||||||||||||||||||||||
Sbjct: 37 ctaaaaagtcaacggtgtcaaacattttga 8
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| |||||||||||||||||||||||| | ||||||||| || | ||||| | |||||
Sbjct: 241 ctccatccgtttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttcgt 182
Query: 63 tttatt 68
|||||
Sbjct: 181 cttatt 176
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaaca 193
|||||||||||||||||| |||||||||
Sbjct: 80 ttttttgaataagacgaatggtcaaaca 53
>RF01058;MIR806;AP008209.1/3514325-3514566 39947:Oryza sativa
Japonica Group
Length = 242
Score = 228 bits (115), Expect = 3e-59
Identities = 205/235 (87%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttaacaattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||| || |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 ttttttt-aaaaaaattaagtaattatttattcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttc--actaacttttttgaataagac 180
|||||||||||||||||||| |||||||||||||||| | || ||||||||||||
Sbjct: 123 atatactttcatgtacacatatagttttacatatttcataaaaaaaaatttgaataagac 182
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
||| |||||||||||| ||||||| ||||| |||||||| |||||||||||||||
Sbjct: 183 gaatggtcaaacatgttctaaaaaatcaacagtgtcaaatattttgaaacggagg 237
Score = 95.6 bits (48), Expect = 3e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 189 aaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
||||||||||||||| |||||||| | ||| ||||||| || ||||||| ||||||| ||
Sbjct: 237 cctccgtttcaaaatatttgacactgttgattttttagaacatgtttgaccattcgtctt 178
Query: 66 attc 69
||||
Sbjct: 177 attc 174
>RF01058;MIR806;AAAA02007571.1/43599-43359 39946:Oryza sativa Indica
Group
Length = 241
Score = 226 bits (114), Expect = 1e-58
Identities = 198/227 (87%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||| |||||||||||| ||||| |||| | |||||||| ||||||||| | ||||| |
Sbjct: 4 ctcccaccgtttcaaaatatttgataccgataactttttaatacgtgtttaaccattcat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 64 cttattt-aaaaaatttaagtaattatttattcttttcatatcatttgatttattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||| |||||||||||| |||||||||||||||||| || | |||||||||||||||
Sbjct: 123 atatactctcatgtacacatatagttttacatatttcacaaattgttttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 183 acgatcaaacatatgttaaaaagtcaacggtgtcaaacattttgaaa 229
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||||||||||||||||| |||||||||| | ||||||||| ||||| ||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgactttttaacatatgtttgatcgttcgtcttattc 172
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| ||| ||||| || |||||||| | |||| ||||| |||||
Sbjct: 76 ttttttaaataagatgaatggttaaacacgtattaaaaagttatcggtatcaaatatttt 17
Query: 226 gaaacggagggagta 240
||||||| |||||||
Sbjct: 16 gaaacggtgggagta 2
>RF01058;MIR806;AACV01006891.1/73451-73212 39947:Oryza sativa
Japonica Group
Length = 240
Score = 224 bits (113), Expect = 4e-58
Identities = 204/234 (87%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||||||||||||||| |||| |||||||| ||||||||| | | ||||||| |||
Sbjct: 8 ctccgtttcaaaatgtttgataccgttgactttt-agtacgtgtctaaccattcgtctta 66
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ttcaaaaaatttaaagtaattatttattctttttatatcatttgattcattgttaaatat 126
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
||||||||| || ||| ||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 127 actttcatgcacccatatagttttacatattttataaactttttt-aataagacgaacgg 185
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||||||||| || |||||||| ||||||||||| |||||||
Sbjct: 186 ttaaacatgtgctaaaaagttaatggtgtcaagtattttgaaacgttgggagta 239
Score = 77.8 bits (39), Expect = 6e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||| | ||| || |||||| ||||||||| |||||||||||
Sbjct: 75 ttttttgaataagacgaatggttagacacgtactaaaa-gtcaacggtatcaaacatttt 17
Query: 226 gaaacggagggagta 240
||||||||| |||||
Sbjct: 16 gaaacggagagagta 2
>RF01058;MIR806;AL731600.3/67344-67602 39947:Oryza sativa Japonica
Group
Length = 259
Score = 224 bits (113), Expect = 4e-58
Identities = 195/222 (87%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 19 atgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccnnnnnnnt 78
||||||||||||| ||||| |||||||||| ||||| |||| || |||||| |
Sbjct: 39 atgtttgacaccgatgactatttagtacgtatttgaccatttgtcttattcaaaaaaaat 98
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 99 tgagtaattatttattctttttatatcatttgattcattgttaaatatacttttatgtac 158
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| ||||||||||||||| | ||| |||||| ||||||| ||||||||||||||| |
Sbjct: 159 acatatagttttacatatttta-taa-tttttttaataagatgaacggtcaaacatgcac 216
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| |||||| |||||||||||||| ||||||
Sbjct: 217 taaaaagtcaacgatgtcaagcattttgaaacggatggagta 258
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 222
||||||||||||||| || ||||||| | || ||||| ||||| |||||||||||||
Sbjct: 95 ttttttgaataagacaaatggtcaaatacgtactaaatagtcatcggtgtcaaacat 39
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||| |||||||||||||| |||||| || |||||||||||| | |||||||
Sbjct: 256 ctccatccgtttcaaaatgcttgacatcgttgactttttagtgcatgtttga 205
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 213 tgtcaaacattttgaaacggagggagta 240
|||||||||||||||||| |||||||||
Sbjct: 29 tgtcaaacattttgaaacagagggagta 2
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 224 bits (113), Expect = 4e-58
Identities = 207/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| ||||| ||| || ||| |||||||||||||| ||||||| |||||||
Sbjct: 4 ctccctccgttttaaaatatttaacgccgttgactttttagtacatgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||| ||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 64 cttatta-aaaaaatttaactaattatttattctttttatatcatttgatttattattaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||| ||||||| |||||||||||||||||| || |||||| ||||||||||
Sbjct: 123 atatactttcatttacacatatagttttacatatttcac-aaatttttttaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||||||||| || |||||||||||||||||| ||||||||| ||||
Sbjct: 182 attgtcaaacatgtgctaaaaggttaacggtgtcaaacattttaaaacggaggaagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||||||| ||||||||||||||| || ||| |||||
Sbjct: 76 tttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggcgttaaatatttt 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
||||||||| |||||||||||||||| | || |||||| || ||||||| |||||| ||
Sbjct: 234 cctccgttttaaaatgtttgacaccgttaaccttttagcacatgtttgacaattcgtctt 175
Query: 66 att 68
|||
Sbjct: 174 att 172
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 224 bits (113), Expect = 4e-58
Identities = 207/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
||||||| |||||||||||||||||| ||||||||||| || ||||||| | |||||
Sbjct: 5 tccctccatttcaaaatgtttgacactattgactttttagcacatgtttgaccgttcgtc 64
Query: 64 ttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaa 123
|||||| ||||||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 65 ttattc-aaaaaatttaagtaattatttattattttcatatcatttgattcattattaaa 123
Query: 124 tatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaa 183
||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||| ||
Sbjct: 124 tatactttcatctacacatatagttttacatatttcataaaattttttgaataagacaaa 183
Query: 184 cggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 184 tggtcaaacatgtacttaaaaagtcaacggtgtcaaatattttgaaacagagggagta 241
Score = 119 bits (60), Expect = 2e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 76 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaatagtgtcaaacatttt 17
Query: 226 gaaacggaggga 237
|||| |||||||
Sbjct: 16 gaaatggaggga 5
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 224 bits (113), Expect = 4e-58
Identities = 192/218 (88%), Gaps = 2/218 (0%)
Strand = Plus / Plus
Query: 13 ttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcgttttattccn 71
||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||
Sbjct: 13 ttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttattt-a 71
Query: 72 nnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatacttt 131
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 72 aaaaatttaattaattatttattcttttcatatcatttgattcattgttaaatatatttt 131
Query: 132 catgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaa 191
||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||
Sbjct: 132 catatacacatatagttttacatatttcacaaaaaaaattgaataagacgaacggttaaa 191
Query: 192 catgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
|||||||||||| |||||||||||||||||||||||||
Sbjct: 192 catgtgctaaaatgtcaacggtgtcaaacattttgaaa 229
Score = 79.8 bits (40), Expect = 2e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||||||| ||||||||| || || |||||||||||||||||||||||||
Sbjct: 76 ttttttaaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 17
Query: 225 tgaa 228
||||
Sbjct: 16 tgaa 13
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||||||||||||||||| |||| |||||| || ||||| | | ||||| ||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgacattttagcacatgtttaaccgttcgtcttattc 172
>RF01058;MIR806;AC145327.2/52567-52806 39947:Oryza sativa Japonica
Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 200/229 (87%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccn 71
||||||||| |||||||||| ||||||||||| |||||||| | |||| || |||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttaggacgtgtttaaccattagtcttattt-a 71
Query: 72 nnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatacttt 131
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 aaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatacttt 131
Query: 132 catgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaa 191
| |||||||| |||||||||||||||||| ||||||||| |||| |||||| ||||||
Sbjct: 132 tacgtacacatatagttttacatatttcacaaactttttt-aatagaacgaacagtcaaa 190
Query: 192 catgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 191 catatgctaaaaagtcaacggtgtcaaacattttaaaacgtagagagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| || ||| ||||| || |||||||||||||||||||||| |||||
Sbjct: 76 ttttttaaataagactaatggttaaacacgtcctaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaa 229
||||
Sbjct: 16 gaaa 13
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 10 cgtttcaaaatgtttgacaccgctgactttttag 43
||||| |||||||||||||||| |||||||||||
Sbjct: 230 cgttttaaaatgtttgacaccgttgactttttag 197
>RF01058;MIR806;AC105770.2/63257-63496 39947:Oryza sativa Japonica
Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 202/231 (87%), Gaps = 5/231 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| | |||||||||||||||||||| | |||||
Sbjct: 6 ctccctccgtttcaaaatgtttgacaccgttaactttttagtacgtgtttgaccgttcgt 65
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cttatt--aaaaaaattaagtaattatttattctttttatatcatttgattcattgttaa 123
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||| | ||||||| |||||||||||||||||| || |||||| |||||||| |
Sbjct: 124 atatatttt--tatacacatatagttttacatatttcac-aaatttttttaataagacaa 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 233
| ||||||| | || ||||||||||||||||||||| |||||||||||||
Sbjct: 181 atagtcaaacgtatgttaaaaagtcaacggtgtcaaatattttgaaacgga 231
Score = 117 bits (59), Expect = 7e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||||||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 78 tttttttaataagacgaacggtcaaacacgtactaaaaagttaacggtgtcaaacatttt 19
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 18 gaaacggagggagta 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||||| |||||||||| ||||||||||
Sbjct: 231 tccgtttcaaaatatttgacaccgttgacttttta 197
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 222 bits (112), Expect = 2e-57
Identities = 204/233 (87%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||| ||||||||| |||||||||| ||||||||| || |||||||| ||||||| |||
Sbjct: 8 ctccatttcaaaatatttgacaccgtggactttttaatatgtgtttgaccattcgtctta 67
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
||| ||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 68 ttc-aaaaaatttaagtaattatttatt-tttttatatcatttgatttattgttaaataa 125
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
|||||||||||||||| || ||||||||||||||| || ||| |||||||||||||||||
Sbjct: 126 actttcatgtacacatataattttacatatttcacaaattttattgaataagacgaacgg 185
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaaca-ttttgaaacggagggag 238
| |||||||||||||||||| |||||||||||| | |||| ||||||||||||
Sbjct: 186 ttaaacatgtgctaaaaagttaacggtgtcaaatattttttaaacggagggag 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| | ||||||||| ||||||||||| |||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacatattaaaaagtccacggtgtcaaatatttt 17
Query: 226 gaaacggag 234
|||| ||||
Sbjct: 16 gaaatggag 8
Score = 44.1 bits (22), Expect = 9e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 1 tgctccctccgttt-caaaatgtttgacaccgctgactttttagtacgtgtttgatcatt 59
|||||||||||||| ||||| |||||||||| | ||||||||| || ||||| | | ||
Sbjct: 240 tgctccctccgtttaaaaaatatttgacaccgttaactttttagcacatgtttaaccgtt 181
Query: 60 cgttttattc 69
||| ||||||
Sbjct: 180 cgtcttattc 171
>RF01058;MIR806;AAAA02003225.1/20808-21050 39946:Oryza sativa Indica
Group
Length = 243
Score = 220 bits (111), Expect = 7e-57
Identities = 178/200 (89%), Gaps = 2/200 (1%)
Strand = Plus / Plus
Query: 37 tttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttattct 96
|||| ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 39 ttttaagtacgtgtttgatcattcgtcttattaaaaaaaaattaagtaattatttattct 98
Query: 97 ttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatat 156
|||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 99 ttttatattatttgattcattgttaaatatactttcatgtgcacatatagttttacatat 158
Query: 157 ttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtc 216
||||| || |||||| ||||||| ||||||| |||||||||||||||||| |||||||||
Sbjct: 159 ttcac-aaatttttttaataagatgaacggttaaacatgtgctaaaaagttaacggtgtc 217
Query: 217 aaa-cattttgaaacggagg 235
||| |||||| |||||||||
Sbjct: 218 aaaccattttaaaacggagg 237
>RF01058;MIR806;AAAA02011276.1/49843-50075 39946:Oryza sativa Indica
Group
Length = 233
Score = 220 bits (111), Expect = 7e-57
Identities = 151/163 (92%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 71 ttaagtaattatttattcttttcatatcatttgattaattgttaaatatactttcatgta 130
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||| |||||||||||||| || |||||| |||||||||||| |||||||| |||
Sbjct: 131 cacatataggtttacatatttcac-aaatttttttaataagacgaacagtcaaacacgtg 189
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 190 ctaaaaagtcaacgtagtcaaacattttaaaacggagggagta 232
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacgg 212
||||||||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 69 ttttttgaataagacaaatggtcaaacacgtgctaaaaagtcaacgg 23
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||||||||| |||||||||||| || ||||||||||| ||||||||||
Sbjct: 230 ctccctccgttttaaaatgtttgactacgttgactttttagcacgtgtttga 179
>RF01058;MIR806;AAAA02034792.1/4708-4947 39946:Oryza sativa Indica
Group
Length = 240
Score = 220 bits (111), Expect = 7e-57
Identities = 198/226 (87%), Gaps = 5/226 (2%)
Strand = Plus / Plus
Query: 17 aaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccnnnnnn 76
||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 17 aaatgtttgacaccgttgactttttagtacgtgtttgatcattcatcttattcaaaaaaa 76
Query: 77 nttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgt 136
||||||||||||||||| |||| || ||||||| ||| |||||||||||||||||||||
Sbjct: 77 tttaagtaattatttattatttt-atgtcatttggttcgttgttaaatatactttcatgt 135
Query: 137 acacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgt 196
|||||| |||||||||||||||||| || ||||| |||||||||| |||||||||||||
Sbjct: 136 acacatatagttttacatatttcacaaaattttt--aataagacgagcggtcaaacatgt 193
Query: 197 gctaaaaagtcaac--ggtgtcaaacattttgaaacggagggagta 240
|||||||| ||||| ||||||| ||||||||| |||||||||||
Sbjct: 194 gctaaaaaatcaacagagtgtcaatcattttgaaccggagggagta 239
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
|||||||||||||| ||| | ||||||| || |||||||||||||||||||||||||||
Sbjct: 75 ttttttgaataagatgaatgatcaaacacgtactaaaaagtcaacggtgtcaaacattt 17
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 220 bits (111), Expect = 7e-57
Identities = 150/163 (92%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 77 ttaagtaattatttattattttcatatcatttgattcattgttaaataaactttgatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| || ||||||||||||||| | || ||| ||||||||||||||||||| |||||
Sbjct: 137 cacatataattttacatatttcacaattttattttaataagacgaacggtcaaatatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 197 ctaaaaagtcaacggtatcaaacattttgaaacggagggagta 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||||| |||| ||||||||||| || | ||||| | |||||
Sbjct: 237 ctccctccgtttcaaaatgtttgataccgttgactttttagcacatatttgaccgttcgt 178
Query: 63 tttatt 68
|||||
Sbjct: 177 cttatt 172
>RF01058;MIR806;AAAA02007631.1/1078-840 39946:Oryza sativa Indica
Group
Length = 239
Score = 218 bits (110), Expect = 3e-56
Identities = 199/227 (87%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
||||||| |||||||||||||| |||| | |||||||| |||||| ||||| |||||
Sbjct: 4 ctccctctgtttcaaaatgtttaacactattaactttttaagtacgtatttgactattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
|||||||| |||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 64 ttttattc--aaaaatttaagtaattatttatactttttatatcatttgaatcattgtta 121
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||| |
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttca-taattttttttaataagatg 180
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 228
|||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 181 aacggtcaaatatatgttaaaaagtcaacggtgtcaaacattttgaa 227
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ttcaaaatgtttgacaccgctgacttttta 42
||||||||||||||||||| ||||||||||
Sbjct: 227 ttcaaaatgtttgacaccgttgacttttta 198
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 225
||||||||||| ||||| |||||| | || || ||||||| || |||| |||||||||
Sbjct: 76 tttttgaataaaacgaatagtcaaatacgtacttaaaaagttaatagtgttaaacatttt 17
Query: 226 gaaacggagggagta 240
||||| |||||||||
Sbjct: 16 gaaacagagggagta 2
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 218 bits (110), Expect = 3e-56
Identities = 149/162 (91%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 76 taagtaattattaattcttttcctatcatttgattcattgttaaatatactttcatatag 135
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct: 136 acatatagttttacatatttcacaattttttttgaataacacgaacggtcaaacatgtgc 195
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||| |||| || |||||||
Sbjct: 196 taaaaagtcaacggtgtcaaacatttagaaatggcgggagta 237
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||| || |||| ||||||||||||||| ||||||||||| || ||||||| | |||||
Sbjct: 235 ctcccgccatttctaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgt 176
Query: 63 tttattc 69
||||||
Sbjct: 175 gttattc 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||| ||||| ||||||||||| |||||||||||| | |||||| |||
Sbjct: 75 tttttttaataaaacgaatggtcaaacatgct-taaaaagtcaacagcgtcaaattttta 17
Query: 226 gaaacggagggagta 240
||||||||| |||||
Sbjct: 16 gaaacggagagagta 2
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 218 bits (110), Expect = 3e-56
Identities = 206/238 (86%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||||||| || |||||||||| || ||||||| |||| ||
Sbjct: 4 ctccctccgtttcaaaatgtttgacatcgttgactttttaatatatgtttgaccatttgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 64 cttattt-aaaaaatttaagtaattatttattcttttcatatcattttattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||| || ||||||| |||||||||||||||||| | |||||| ||| ||||||
Sbjct: 123 ttatacttttatatacacatatagttttacatatttcac--aatttttttaatgagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 181 acggttaaacatgtgctaaaaagtcaacggtgttaaatattttgaaacggaggtagta 238
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| || |||||||||| | ||||||||||||| |||||||||||||
Sbjct: 76 ttttttaaataagacaaatggtcaaacatatattaaaaagtcaacgatgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
||||||||||||||| ||| |||||| ||||||||||| || |||||
Sbjct: 233 cctccgtttcaaaatatttaacaccgttgactttttagcacatgttt 187
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 208/239 (87%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttt-agtacgtgtttgatcattcg 61
||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| |||||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 64 tcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcattatta 123
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||| |||||||||||||| ||||||||||||||||| ||| |||||| |||||||||
Sbjct: 124 aatatattttcatgtacacatatagttttacatatttca-taa-tttttttaataagacg 181
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||| ||| | |||||||||||| || | || ||||||||||||| | ||||||||
Sbjct: 182 aatggttaaatacgtgctaaaaagttaaggccgttaaacattttgaaatgaagggagta 240
Score = 103 bits (52), Expect = 1e-21
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaa-gtcaacggtgtcaaacattt 224
|||||||||||||||||| ||||||| | || ||||||| ||||||||||||||||||||
Sbjct: 77 ttttttgaataagacgaatggtcaaatacgtactaaaaaagtcaacggtgtcaaacattt 18
Query: 225 tgaaacggagggagta 240
||||||||||||||||
Sbjct: 17 tgaaacggagggagta 2
>RF01058;MIR806;AACV01007621.1/52559-52322 39947:Oryza sativa
Japonica Group
Length = 238
Score = 218 bits (110), Expect = 3e-56
Identities = 207/238 (86%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||||||||||||| ||||||| || | |||||||| |||||||||||||||||||
Sbjct: 4 ctccatccgtttcaaaatatttgacatcgttaactttttaatacgtgtttgatcattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 64 cttatt--aaaaaaattaagtaattatttattctttttatattatttgattcgttgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| |||||||| ||||| ||||||||||||||| | ||| |||||| ||||||| ||
Sbjct: 122 atatattttcatgtgcacatatagttttacatatttta-taa-tttttttaataagatga 179
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||||
Sbjct: 180 acggtcaaatatgtgctaaaaagtcaacgatgttaaataatttgaaacggagggagta 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| | ||||||| || |||||||| |||| ||||||| |||||
Sbjct: 76 tttttttaataagacgaatgatcaaacacgtattaaaaagttaacgatgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||| ||||||
Sbjct: 16 gaaacggatggagta 2
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 206/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||||||||||| ||| | |||||| || || |||||| |||||||
Sbjct: 4 ctccctccgtttctaaatgtttgacgccgttaacttttaagcgcgggtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||| |||||||| || ||| ||||||||||||||||||||||
Sbjct: 64 cttattt-aaaaaatttaactaattattgatgactttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 123 atatactttcatgtacacatatagttttacatatttca-taaatttttttaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||
Sbjct: 182 acggtcaaacatgtgctaaaaagttaatggtgtcaaacattttaaaacggagggagta 239
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||| | ||| |||||| ||||| |||||||||||
Sbjct: 76 ttttttaaataagacgaatggtcaaacccgcgcttaaaagttaacggcgtcaaacattta 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| ||||||||||||||| | ||||||||| || ||||||| | |||||
Sbjct: 237 ctccctccgttttaaaatgtttgacaccattaactttttagcacatgtttgaccgttcgt 178
Query: 63 tttatt 68
|||||
Sbjct: 177 cttatt 172
>RF01058;MIR806;AACV01016852.1/644-883 39947:Oryza sativa Japonica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 206/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||| |||||||||| ||| ||||| ||||||||||||| |||||||| ||| |||
Sbjct: 4 ctccctcggtttcaaaatatttaacaccattgactttttagtatgtgtttgaccatacgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct: 64 cttattt-aaaaattttaagtaattatttatt-ttttcatatcatttaattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||| ||| ||| ||||||||||||||||| || | |||||||||||||||
Sbjct: 122 atatactttcatatacgcatatagttttacatatttcataaattcttttgaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 182 acggtcaaatatatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| ||||||||| | ||||||||| | |||||||||||| ||||| ||| ||||||
Sbjct: 75 tttttaaataagacgtatggtcaaacacatactaaaaagtcaatggtgttaaatattttg 16
Query: 227 aaacggagggagta 240
|||| |||||||||
Sbjct: 15 aaaccgagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 237 ctccctccgttttaaaatatttgacaccgttgactttttag 197
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 206/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 4 ctccatccatttcataatgtttgacaccgttgactttttagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| | ||| ||||||||||| ||||
Sbjct: 64 cttattt-aaaaaatttaagtaattatttattcttttcacatcgtttgattcattattaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||||||||||||| |||||||||||||||||| | | |||||||||||| ||
Sbjct: 123 atatattttcatgtacacacatagttttacatatttcacagattcttttgaataagatga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| |||||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 183 acggttaaacatgtgctaaaaagtcaacaatgtcaaaca-tttgatacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| || |||||||||||||||||||||||||| |
Sbjct: 76 ttttttaaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattat 17
Query: 226 gaaacggagggagta 240
|||| ||| ||||||
Sbjct: 16 gaaatggatggagta 2
>RF01058;MIR806;AP008209.1/34522251-34522486 39947:Oryza sativa
Japonica Group
Length = 236
Score = 216 bits (109), Expect = 1e-55
Identities = 200/226 (88%), Gaps = 5/226 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttatagtacgtgtttgaccatttat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| ||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 64 cttattc-aaaaaatttaagtaattatttatt-tttttatatcatttgatttattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||| ||||||||||| || |||||| ||||||| ||| |||||| |||||||| |
Sbjct: 122 atatactt-catgtacacatataattttacgtatttca-taattttttt-aataagacaa 178
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 228
|||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 179 acggtcaaacatatgttaaaaagtcaacggtgtcaaacattttgaa 224
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| || ||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 76 ttttttgaataagataaatggtcaaacacgtactataaagtcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ttcaaaatgtttgacaccgctgacttttta 42
||||||||||||||||||| ||||||||||
Sbjct: 224 ttcaaaatgtttgacaccgttgacttttta 195
>RF01058;MIR806;AP005804.2/167343-167104 39947:Oryza sativa Japonica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 206/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| ||||| |||| ||||| ||| ||||| || |||||||| |||||||
Sbjct: 4 ctccctccgttttaaaatatttggcaccgttgatttttttatatgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 64 tttattt-aaaaaatttaagtaattatttattcttttcatatcatttgattcattgctaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| |||||||||||||||||| | |||||| ||||| ||||
Sbjct: 123 atatactttcatgtacacatatagttttacatatttcac-atttttttttaataaaacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| |||||| ||||||||||| || ||||||||| ||||||||| ||||||||||
Sbjct: 182 acggttaaacatatgctaaaaagttaatggtgtcaaatattttgaaatggagggagta 239
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||| ||||| ||||||||| | ||||| ||||||||| |||| |||||
Sbjct: 76 ttttttaaataaaacgaatggtcaaacacatataaaaaaatcaacggtgccaaatatttt 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| ||||||||| | ||||||||| | ||||| | | |||||
Sbjct: 237 ctccctccatttcaaaatatttgacaccattaactttttagcatatgtttaaccgttcgt 178
Query: 63 tttatt 68
||||||
Sbjct: 177 tttatt 172
>RF01058;MIR806;AACV01005742.1/10101-9864 39947:Oryza sativa
Japonica Group
Length = 238
Score = 214 bits (108), Expect = 4e-55
Identities = 205/236 (86%), Gaps = 4/236 (1%)
Strand = Plus / Plus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttt 64
|||||||||||||||||||||| |||| | |||||| ||||||||||||| |||| | |
Sbjct: 6 ccctccgtttcaaaatgtttgataccgttaacttttcagtacgtgtttgactattcatct 65
Query: 65 tattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaat 124
|||| | ||||| |||||||||||||| |||| |||||||| ||||||||||
Sbjct: 66 tatt--aaaaaaatcaagtagttatttattcttttcatattatttgatttattgttaaat 123
Query: 125 atactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaac 184
||| ||||||||||| || ||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 124 atattttcatgtacagatatagttttacatatttca-taattttttt-aataagacgaac 181
Query: 185 ggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 182 ggttaaacatgtgctaaaaagccaacggtgtcaaatattttgaaacggagggagta 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| |||||||| || || |||||| |||||| |||||||||||
Sbjct: 76 tttttttaataagatgaatagtcaaacacgtactgaaaagttaacggtatcaaacatttt 17
Query: 226 gaaacggaggg 236
|||||||||||
Sbjct: 16 gaaacggaggg 6
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||||||||||||| |||||||||| || |||||||| || |||||
Sbjct: 235 ctccctccgtttcaaaatatttgacaccgttggctttttagcacatgttt 186
>RF01058;MIR806;CR855021.1/42350-42118 4530:Oryza sativa (rice)
Length = 233
Score = 214 bits (108), Expect = 4e-55
Identities = 170/192 (88%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 44 tacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttattctttttata 103
||||||||||| ||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 38 tacgtgtttgaccattcgtcttattcaaaaaaaattaagtaattatttattctttttata 97
Query: 104 tcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcacta 163
||||||||||||| |||||||| || |||||||||||| ||||||| |||||||||| |
Sbjct: 98 tcatttgattcatggttaaata--ctatcatgtacacatatagttttgcatatttcacaa 155
Query: 164 acttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 223
| |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 156 attttttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgtcaaacatt 215
Query: 224 ttgaaacggagg 235
|||||| |||||
Sbjct: 216 ttgaaatggagg 227
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
||||| |||||||||||||||||||| | ||||||||| || | ||||| | ||||| ||
Sbjct: 227 cctccatttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttcgtctt 168
Query: 66 att 68
|||
Sbjct: 167 att 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/75 (82%), Gaps = 7/75 (9%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| || |||| ||||| |||||||||||
Sbjct: 69 ttttttgaataagacgaatggtcaaacacgt-------agtcgacggtatcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||| ||| ||||||
Sbjct: 16 gaaagggatggagta 2
>RF01058;MIR806;AAAA02034417.1/5267-5034 39946:Oryza sativa Indica
Group
Length = 234
Score = 212 bits (107), Expect = 2e-54
Identities = 139/147 (94%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 86 ttatttattctttttatatcatttgattcattgttaaatatactttcatgtacacatgta 145
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 82 ttatttatt-tttttatatcatttgattcattgttaaatatacttttatgtacacatata 140
Query: 146 gttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaag 205
||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 141 gttttacatatttta-taaatttttttaataagacgaacggtcaaacatgtgctaaaaag 199
Query: 206 tcaacggtgtcaaacattttgaaacgg 232
|||||||||||||||||||| ||||||
Sbjct: 200 tcaacggtgtcaaacattttaaaacgg 226
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||| |||||||||||||||| ||||||||||| || ||||||| | ||||| |||||
Sbjct: 226 ccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 173 aataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattttgaaacg 231
||||||||||| ||||||||| || || ||||| |||||| ||| ||||||||| |||||
Sbjct: 80 aataagacgaatggtcaaacacgtactaaaaaaatcaacgatgttaaacattttaaaacg 21
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 212 bits (107), Expect = 2e-54
Identities = 208/239 (87%), Gaps = 5/239 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
|||||||||||| ||||| |||||||||| |||||||||| ||| || ||||| ||||||
Sbjct: 4 ctccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| |||||| ||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 64 tcttattc-aaaaaatttaagtaattatttattatttttatat-atttgatttattgtta 121
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||| ||| |||||||||| |||||||||||||||||| |||||||| ||||| |||
Sbjct: 122 aatatattttaatgtacacatatagttttacatatttcacaaacttttt--aataaaacg 179
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| ||||||||| |||||||| |||||||||||||||||| ||| ||||||||||
Sbjct: 180 aacggttaaacatgtgttaaaaagttaacggtgtcaaacattttaaaatggagggagta 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||| ||||||| | | | ||||||||||||||||||||| ||||
Sbjct: 77 ttttttgaataagacgaatggtcaaatacatacttaaaaagtcaacggtgtcaaatattt 18
Query: 225 tgaaacggagggagta 240
| ||||||||||||||
Sbjct: 17 taaaacggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||| |||||||||||||||| | |||||||| || ||||| | | |||||
Sbjct: 236 ctccctccattttaaaatgtttgacaccgttaactttttaacacatgtttaaccgttcgt 177
Query: 63 tttatt 68
||||||
Sbjct: 176 tttatt 171
>RF01058;MIR806;AP008212.1/21880161-21879923 39947:Oryza sativa
Japonica Group
Length = 239
Score = 212 bits (107), Expect = 2e-54
Identities = 194/223 (86%), Gaps = 3/223 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||| |||| | ||||||||| |||||||| | |||||
Sbjct: 4 ctccctccgtttcaaaatgtttgccaccattaactttttagcgtgtgtttgaccgttcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 64 cttatt--aaaaaaattaaataattatttattctttttatatcatttgatttattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||| | ||||| || ||||||||| || |||||||||||||||||
Sbjct: 122 atatactttcatgtacacgtatagttgtatatatttcac-aaattttttgaataagacga 180
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 181 acggtcaaatatgtgctaaagagtcaacggtgtcaaacatttt 223
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||||||||||||| |||||||||| || |||| ||||||||||
Sbjct: 76 tttttttaataagacgaacggtcaaacacacgctaaaaagttaatggtggcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 16 aaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||||||||||||| ||||| ||||| || | ||||| | ||||| ||||||
Sbjct: 223 aaaatgtttgacaccgttgactctttagcacatatttgaccgttcgtcttattc 170
>RF01058;MIR806;AL731587.2/124021-123783 39947:Oryza sativa Japonica
Group
Length = 239
Score = 212 bits (107), Expect = 2e-54
Identities = 203/235 (86%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
|||| |||| |||||||||||||| | ||||||||||| |||||||||| ||||||| ||
Sbjct: 7 cctctgttttaaaatgtttgacactgttgactttttagaacgtgtttgaccattcgtctt 66
Query: 66 attccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaata 125
|||| ||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 67 attc-aaaaaaattaagtaattatttattttttttgtatcatttgattcattgttaaata 125
Query: 126 tactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacg 185
||| || || ||||||| |||||||||||||||||| | |||||| |||||||| ||||
Sbjct: 126 tacatttatatacacatatagttttacatatttcac--aatttttttaataagacaaacg 183
Query: 186 gtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||| ||||||||||||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 184 gttaaatatgtgctaaaaagtcaacggtgtcaaatattttaaaacagagagagta 238
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacgttctaaaaagtcaacagtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||| |||| ||||
Sbjct: 16 aaaacagaggaagta 2
>RF01058;MIR806;AACV01018965.1/447-687 39947:Oryza sativa Japonica
Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 154/166 (92%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattcttttt-atatcatttgattcattgttaaatatactttcatgt 136
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 76 ttaagtaattatttattttttttcatatcatttgattcattgttaaatatactttcatgt 135
Query: 137 acacatgtagttttacatatttcactaacttttttgaa--taagacgaacggtcaaacat 194
|||||| || |||||||||||||| ||| |||||| || ||||||||| |||||||||
Sbjct: 136 acacatataattttacatatttca-taattttttttaaaataagacgaatagtcaaacat 194
Query: 195 gtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 195 gtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 240
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
|||||||||||||||||||||||||| ||||||||||| || ||||||| |||||| ||
Sbjct: 235 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgactattcgtctt 176
Query: 66 att 68
|||
Sbjct: 175 att 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||||| ||| ||||||||||||||||| |||||| ||||||||
Sbjct: 75 tttttttaataagacgat-ggttaaacatgtgctaaaaagcatacggtgcataacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AP008212.1/26178843-26179082 39947:Oryza sativa
Japonica Group
Length = 240
Score = 212 bits (107), Expect = 2e-54
Identities = 149/163 (91%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 77 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatactttcatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| | ||| |||||||||||||| || |||||||||| ||||||||||||||| |||||
Sbjct: 137 tatttatagctttacatatttcacaaaattttttgaatgagacgaacggtcaaatatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 197 ctaaaaagtcaacggtgtcaaacatttagaaacagagggagta 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 237 ctccctctgtttctaaatgtttgacaccgttgactttttag 197
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgt 196
|||||| ||||||||||| ||||||||||||
Sbjct: 75 tttttttaataagacgaatggtcaaacatgt 45
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttgattcattgttaaatatacttttatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||| |
Sbjct: 138 tacatgtagttttacatatttcacaaaagtttttaaataagacgaatggtcaaacatgag 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggg 236
|||||||||||||||||| ||| |||| |||||||||||
Sbjct: 198 ctaaaaagtcaacggtgttaaatatttagaaacggaggg 236
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttt 64
||||||||||| |||| ||| |||||| ||||||||||| | ||||||| ||||||| |
Sbjct: 236 ccctccgtttctaaatatttaacaccgttgactttttagctcatgtttgaccattcgtct 177
Query: 65 tatt 68
||||
Sbjct: 176 tatt 173
Score = 44.1 bits (22), Expect = 9e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| |||| |||||| || | |||||||||| | |||||| ||||
Sbjct: 76 ttttttgaataagatgaactgtcaaatatatttaaaaaagtcaatgacgtcaaatattta 17
Query: 226 gaaacggagggagt 239
||||||||| ||||
Sbjct: 16 gaaacggagagagt 3
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 212 bits (107), Expect = 2e-54
Identities = 149/163 (91%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 79 ttaagtaattattaattatttttctatcatttgattcattgttaaatatagtttcatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||| ||||| |||||||||||| ||||||
Sbjct: 139 tacatatagttttacatatttcacaaaattttttaaataaaacgaacggtcaagcatgtg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||| |||||||||||| ||||||||| |||||
Sbjct: 199 ctaaaaagtcaacgatgtcaaacatttagaaacggagagagta 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
||||||||| |||||||||||| || ||||||||||| || || |||| | |||||||||
Sbjct: 235 ctccgtttctaaatgtttgacatcgttgactttttagcacatgcttgaccgttcgtttta 176
Query: 67 tt 68
||
Sbjct: 175 tt 174
Score = 44.1 bits (22), Expect = 9e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacg 211
|||||| |||||| |||| |||||||||| | |||||||||||||
Sbjct: 76 tttttttaataaggcgaatggtcaaacatattttaaaaagtcaacg 31
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 210 bits (106), Expect = 7e-54
Identities = 167/186 (89%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| |||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 tcttattc-aaaaaatttaaataattatttattcttttcatatcatttgattcattgtta 122
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||||||| |||| |||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 123 aatatactttaatgt--acatatagttttacatatttcacaaaattttttgaataagacg 180
Query: 182 aacggt 187
||||||
Sbjct: 181 aacggt 186
Score = 103 bits (52), Expect = 1e-21
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||| | ||||||| || || |||||||||||||||||||||||||
Sbjct: 77 ttttttgaataagacgaatgatcaaacacgtacttaaaaagtcaacggtgtcaaacattt 18
Query: 225 tgaaacggagggagta 240
||||||||||||||||
Sbjct: 17 tgaaacggagggagta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacac 29
|||||||||||||||||||||||||||
Sbjct: 225 ctccctccgtttcaaaatgtttgacac 199
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 210 bits (106), Expect = 7e-54
Identities = 200/230 (86%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccn 71
||||||||| |||||||||| ||||||||||||| ||||| | |||| || ||||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttagtatatgtttaaccatttgtcttattc-a 71
Query: 72 nnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatacttt 131
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 aaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatacttt 131
Query: 132 catgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaa 191
|||||| |||| |||||||| ||||||| | | |||||| ||||||||||||| | |||
Sbjct: 132 catgtatacatatagttttatatatttcgc--aatttttttaataagacgaacgattaaa 189
Query: 192 catgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cataggcttaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||||||||| || ||| |||||| | |||||||||||||||||||||| |||||
Sbjct: 76 ttttttgaataagacaaatggttaaacatatactaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaa 229
||||
Sbjct: 16 gaaa 13
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 237 ctccctccgtttcaaaatgtttgacaccgttgacttttta 198
>RF01058;MIR806;AAAA02007727.1/39772-40015 39946:Oryza sativa Indica
Group
Length = 244
Score = 210 bits (106), Expect = 7e-54
Identities = 193/222 (86%), Gaps = 3/222 (1%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgacttttt--agtacgtgtttgatcattcgttttattc 69
|||||||||||||||||||| ||| ||||| | ||||||||| | ||||||||||||||
Sbjct: 14 tttcaaaatgtttgacaccgttgatttttttaattacgtgtttaaccattcgttttattc 73
Query: 70 cnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatact 129
|||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 74 -aaaaaatttaagtaattatttattcttttcatatcatttgattctttgttaaatatact 132
Query: 130 ttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtca 189
|| || ||||| | |||||||||||||||||| || |||||| ||||||| |||||||||
Sbjct: 133 tttatatacacctatagttttacatatttcacaaatttttttaaataagatgaacggtca 192
Query: 190 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 231
||||| ||||||||| |||| ||||||||||||||| |||||
Sbjct: 193 aacatatgctaaaaattcaatggtgtcaaacattttaaaacg 234
Score = 54.0 bits (27), Expect = 9e-07
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct--aaaaagtcaacggtgtcaaacatt 223
|||||||||||| ||||| ||| ||||| || | ||||| ||||||||||||||||||
Sbjct: 79 ttttttgaataaaacgaatggttaaacacgtaattaaaaaaatcaacggtgtcaaacatt 20
Query: 224 ttgaaa 229
||||||
Sbjct: 19 ttgaaa 14
>RF01058;MIR806;AP008209.1/32847449-32847678 39947:Oryza sativa
Japonica Group
Length = 230
Score = 208 bits (105), Expect = 3e-53
Identities = 145/157 (92%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 68 ttaaataattatttattcttttcatatcatttaattcattgttaaatatactttcatata 127
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||||||||||||||||| || |||||| ||||||||||||||| |||||||||
Sbjct: 128 cacatatagttttacatatttca-tattttttttaaataagacgaacggttaaacatgtg 186
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggag 234
|||||||||||| ||||||||| ||||||||||||||
Sbjct: 187 ctaaaaagtcaatggtgtcaaatattttgaaacggag 223
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||||||||| ||||||||| ||||||||||| || |||||
Sbjct: 223 ctccgtttcaaaatatttgacaccattgactttttagcacatgttt 178
>RF01058;MIR806;AP008214.1/26299851-26300093 39947:Oryza sativa
Japonica Group
Length = 243
Score = 208 bits (105), Expect = 3e-53
Identities = 177/202 (87%), Gaps = 1/202 (0%)
Strand = Plus / Plus
Query: 33 tgactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattattta 92
|||||||||||||||||||||| ||||||| |||||| |||||||||||||||
Sbjct: 36 tgactttttagtacgtgtttgaccattcgtcttattc-aaaaaatttaagtaattattta 94
Query: 93 ttctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttac 152
||||||| |||||||||||||||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 95 ttcttttcatatcatttgattcattgttaaatatacttctatgtatacatatagctttac 154
Query: 153 atatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacgg 212
|||||||| || |||||| |||||||| || |||||||||| || ||||||||||||||
Sbjct: 155 atatttcataaaattttttaaataagacaaatggtcaaacatatgttaaaaagtcaacgg 214
Query: 213 tgtcaaacattttgaaacggag 234
||||||||||||| ||||||||
Sbjct: 215 tgtcaaacattttaaaacggag 236
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaa 209
|||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 78 ttttttgaataagacgaatggtcaaacacgtactaaaaagtcaa 35
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||| |||||||||||||||| ||||||||||
Sbjct: 236 ctccgttttaaaatgtttgacaccgttgacttttta 201
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 208 bits (105), Expect = 3e-53
Identities = 147/161 (91%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
|||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 80 aagtaattatttattcctttcatatcatttgattcattattaaatatattttcatataca 139
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
|| |||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 140 cacatagttttacatatttcacaaatatttttgaataagacgaacggtcaaacatgtgct 199
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 200 aaaaagtcaacggtgtcaaatattttaaaatagagggagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| |||||||||||| || |||| | || ||||||||||||||
Sbjct: 76 tttttttaataagatgaatggtcaaacatgtacttaaaaattaatagtgtcaaacatttt 17
Query: 226 gaaacgga 233
||||||||
Sbjct: 16 gaaacgga 9
Score = 54.0 bits (27), Expect = 9e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||| ||| ||||| |||||||||| ||||||||||| || ||||||| | |||||
Sbjct: 238 ctccctctattttaaaatatttgacaccgttgactttttagcacatgtttgaccgttcgt 179
Query: 63 tttattc 69
||||||
Sbjct: 178 cttattc 172
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 205/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||| ||| ||||||||| ||||| ||| |||| ||||||| ||||| |||||||
Sbjct: 4 ctccatccattttaaaatgtttaacaccattgatttttaagtacgtatttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 cttattc-aaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||| ||||||||| |||||||||||||||||| || |||||| ||||||||||
Sbjct: 123 atatatttttatgtacacacatagttttacatatttcac-aaatttttttaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 182 acggtcaaatatgtgctaaaaagttaacggtgataaatattttaaaacggagggagta 239
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||| | || || |||| |||| ||||| |||||||||
Sbjct: 76 ttttttgaataagacgaatggtcaaatacgtacttaaaaatcaatggtgttaaacatttt 17
Query: 226 gaaacggagggagta 240
||| ||| ||||||
Sbjct: 16 aaaatggatggagta 2
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 206 bits (104), Expect = 1e-52
Identities = 206/240 (85%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||| || || ||
Sbjct: 64 cttattc-aaaaaatttaagtaattatttattcttttcatatcatttgatttatagtaaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttca--ctaacttttttgaataagac 180
|||||||||||| ||||||| ||||||||||||||||| || |||||||||||
Sbjct: 123 atatactttcatatacacatatagttttacatatttcaacaaaaaaaatttgaataagat 182
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| |||||| ||||||||||||| |||||||||||||| ||||| | ||||||
Sbjct: 183 gaacggtaaaacatacactaaaaagtcaacagtgtcaaacattttaaaacgaatggagta 242
Score = 125 bits (63), Expect = 3e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||
Sbjct: 76 ttttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 cgtttcaaaatgtttgacaccgctgactttttagt 44
||||| |||||||||||||| | ||||||||||||
Sbjct: 233 cgttttaaaatgtttgacactgttgactttttagt 199
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 197/229 (86%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccn 71
||||||||||||||| | | ||| |||||||| ||||||||| ||||||| ||||||
Sbjct: 14 tttcaaaatgtttgatattgttgattttttagtgcgtgtttgaccattcgtcttattc-a 72
Query: 72 nnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatacttt 131
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 73 aaaaatttaagtaattatttattctttttatatcatttaatttattgttaaatatacttt 132
Query: 132 catgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaa 191
||||||||||| || |||||||||||||| || ||| ||||| ||||||||| |||
Sbjct: 133 catgtacacatataattttacatatttcaaaaaaaaatttaaataaaacgaacggttaaa 192
Query: 192 catgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 193 catgtgctaaaaagtcaacggtgttaaatattttaaaacggagggagta 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||||| | ||||||| ||||| | |||||||||||
Sbjct: 77 ttttttgaataagacgaatggtcaaacacgcactaaaaaatcaacaatatcaaacatttt 18
Query: 226 gaaa 229
||||
Sbjct: 17 gaaa 14
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| ||||| ||| |||||| ||||||||||| || ||||| | | |||||
Sbjct: 239 ctccctccgttttaaaatatttaacaccgttgactttttagcacatgtttaaccgttcgt 180
Query: 63 tttatt 68
||||||
Sbjct: 179 tttatt 174
>RF01058;MIR806;AACV01010775.1/2057-2297 39947:Oryza sativa Japonica
Group
Length = 241
Score = 206 bits (104), Expect = 1e-52
Identities = 205/237 (86%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgactttttag-tacgtgtttgatcattcgtt 63
||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||| ||
Sbjct: 6 ccctctgtttcaaaatgttttacaccgttgactttttaaatacgtatttgatcatttgtc 65
Query: 64 ttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaa 123
||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttattt-aaaaattttaattaattatttattctttttatatcatttgattcattgttaaa 124
Query: 124 tatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaa 183
|||| ||| |||||||||| |||||||||||||||||| || |||||| |||| ||||||
Sbjct: 125 tatatttttatgtacacatatagttttacatatttcac-aaatttttttaatacgacgaa 183
Query: 184 cggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| || |||||| ||||||||||| |||||| ||||| ||||| ||||||||||||||
Sbjct: 184 cagttaaacatatgctaaaaagttaacggtatcaaatattttaaaacggagggagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggaggg 236
||||||||||||||||| |||||||||||||| |||||
Sbjct: 43 taaaaagtcaacggtgtaaaacattttgaaacagaggg 6
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 206 bits (104), Expect = 1e-52
Identities = 200/230 (86%), Gaps = 7/230 (3%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcgttttattcc 70
|||||||||||||||||||| ||| |||||| |||| | ||||| ||||||| ||||||
Sbjct: 19 tttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtcttattc- 77
Query: 71 nnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatactt 130
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 78 aaaaaatttaagtaattatttattctttttatatcatttgatttattgttaaatatactt 137
Query: 131 tcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaa 190
| ||||| |||| |||||||||||||||||| || |||||| ||||||||||||| |
Sbjct: 138 tgatgtatacatatagttttacatatttcac-aaatttttttaataagacgaacg----a 192
Query: 191 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 193 tcatgtgttaaaaagtcaacggtgtcaaacattttgaaatagagggagta 242
Score = 81.8 bits (41), Expect = 4e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||| ||||||| |||| || ||||| |||||||||||||||||||
Sbjct: 83 ttttttgaataagacgaatggtcaaatatgtacttaaaaaatcaacggtgtcaaacattt 24
Query: 225 tgaaa 229
|||||
Sbjct: 23 tgaaa 19
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||| |||||||||||||||||||| ||||||||||
Sbjct: 240 ctccctctatttcaaaatgtttgacaccgttgacttttta 201
>RF01058;MIR806;AAAA02023902.1/640-883 39946:Oryza sativa Indica
Group
Length = 244
Score = 206 bits (104), Expect = 1e-52
Identities = 152/166 (91%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaat---atactttcat 134
|||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 79 ttaagtaattatttattcttttcgtatcatttgattcattgttaaattatatactttcat 138
Query: 135 gtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacat 194
|||||||| |||||| ||||||||||| || |||||| |||||||||||| ||||||||
Sbjct: 139 gtacacatatagtttgacatatttcacaaattttttt-aataagacgaacaatcaaacat 197
Query: 195 gtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 198 atgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 243
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| || ||||||||| ||||| |||| |||||| | |||||||||||
Sbjct: 77 tttttttaataagacaaatggtcaaacacgtgctcaaaaatcaacgatttcaaacatttt 18
Query: 226 g-aaacggagggagta 240
| ||||||||||||||
Sbjct: 17 gaaaacggagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
|||||||||||||||||||||||||| ||||||||||| | |||||||| ||||| ||
Sbjct: 238 cctccgtttcaaaatgtttgacaccgttgactttttagcatatgtttgattgttcgtctt 179
Query: 66 att 68
|||
Sbjct: 178 att 176
>RF01058;MIR806;AAAA02022678.1/8425-8663 39946:Oryza sativa Indica
Group
Length = 239
Score = 204 bits (103), Expect = 4e-52
Identities = 149/163 (91%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 77 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||||||||||||||| | ||| | |||| ||||||||||||| ||||||| |||
Sbjct: 137 cacatatagttttacatattt-aataaatatttttaataagacgaacgatcaaacacgtg 195
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| |||||||||||||||||| ||||| |||| || ||||||
Sbjct: 196 ctataaagtcaacggtgtcaaatattttaaaacagatggagta 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 11 gtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||| ||||| |||||||||| ||||||| ||| |||||||||||| ||||| |||||
Sbjct: 228 gttttaaaatatttgacaccgttgactttatagcacgtgtttgatcgttcgtcttatt 171
>RF01058;MIR806;AACV01020567.1/776-1014 39947:Oryza sativa Japonica
Group
Length = 239
Score = 204 bits (103), Expect = 4e-52
Identities = 148/163 (90%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||||
Sbjct: 76 ttaagtaattattaattctttttctatcatatgattcattgttaaatatatttttatgta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||||||||||||| || ||||| ||||| ||||||||| |||||||||
Sbjct: 136 ggcatatacttttacatatttcacaaaagtttttaaataaaacgaacggttaaacatgtg 195
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| ||||||||||| || ||||| | | |||||
Sbjct: 236 ctccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgttcgt 177
Query: 63 tttatt 68
||||||
Sbjct: 176 tttatt 171
>RF01058;MIR806;AAAA02021981.1/21983-21742 39946:Oryza sativa Indica
Group
Length = 242
Score = 204 bits (103), Expect = 4e-52
Identities = 208/240 (86%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccattctt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattc-attgtta 121
|||||| ||||||||| |||||||||| | ||||||||||| || | | ||
Sbjct: 64 cttattc-aaaaaatttaagtaatgatttattcttatcatatcatttgagtccagagcta 122
Query: 122 aatatactttcatgtacacatgtagttt-tacatatttcactaacttttttgaataagac 180
|| ||||| |||| ||||||| ||||| ||||||||| ||||| |||||||||||||||
Sbjct: 123 aacatactatcatatacacatatagttactacatattttactaatttttttgaataagac 182
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 183 gaatggtcaaacacgtgctaaaaagtcaacggtgtcaaaca-tttgaaacggagggagta 241
Score = 125 bits (63), Expect = 3e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 76 ttttttgaataagaagaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 239 ctccctccgtttcaaa-tgtttgacaccgttgactttttagcacgtgtttgaccattcgt 181
Query: 63 tttattc 69
||||||
Sbjct: 180 cttattc 174
>RF01058;MIR806;AP005190.3/32973-32734 39947:Oryza sativa Japonica
Group
Length = 240
Score = 204 bits (103), Expect = 4e-52
Identities = 206/239 (86%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||| ||||||||||||||||||||| | | ||| |||| ||||||| | |||||||
Sbjct: 4 ctccctctgtttcaaaatgtttgacaccgttaattttgtagtgcgtgttttaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct: 64 cttatta-aaaaaatttaagtaattacttattcttctcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaa-taagacg 181
||||| |||||||||||||| |||| || |||||||| || |||||| || |||||||
Sbjct: 123 atatattttcatgtacacat--agttgtatatatttcataaattttttttaaataagacg 180
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacagtcaaacatgtgctaaagagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||||||||||||||||||| ||||| ||||| || |||||||
Sbjct: 237 ctccctccgtttcaaaatgtttgacaccgttgactctttagcacatgtttga 186
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||| ||||| | ||| ||| | ||||||||||||||||||
Sbjct: 76 tttttttaataagacgaatggtaaaacacgcactacaaaattaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
||||| |||||||||
Sbjct: 16 gaaacagagggagta 2
>RF01058;MIR806;AAAA02007552.1/7379-7618 39946:Oryza sativa Indica
Group
Length = 240
Score = 204 bits (103), Expect = 4e-52
Identities = 149/163 (91%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 78 ttaagtaattattaattcttttt-tatcatttgattcattgttaaatatatttatatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| ||||||||||||| ||||||||||||||| || ||
Sbjct: 137 tacatatagttttacatatttcaccaacttttttgaattagacgaacggtcaaatatatg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||| || | |||||||||
Sbjct: 197 ctaaaaagtcaacggtgtcaaacattttaaatcagagggagta 239
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||| | || |||||||||||||||| |||||||||||
Sbjct: 237 ctccctctgatttaaaatgtttgacaccgttgactttttag 197
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| | ||||||||||||| | |||| |||| |||||||||| ||||
Sbjct: 60 aacggtcaaacatattttaaaaagtcaacgacggcaaatatttagaaacggaggaagta 2
>RF01058;MIR806;ABRL01000721.1/4249-4012 65489:Oryza barthii
Length = 238
Score = 204 bits (103), Expect = 4e-52
Identities = 145/158 (91%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |
Sbjct: 79 aagtaattattaattcttttcatatcatttgattcattgttaaatatacttttatgtata 138
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| |||||||||||||||||| | |||||| ||||||||| |||||||||||||||||
Sbjct: 139 catatagttttacatatttcac--aatttttttaataagacggacggtcaaacatgtgct 196
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||||||| || |||||||||| ||||||||||||
Sbjct: 197 aaaaagtcaacagtatcaaacatttagaaacggaggga 234
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||||||||| |||||||||| || | ||||||||||| || |||||||
Sbjct: 234 tccctccgtttctaaatgtttgatactgttgactttttagcacatgtttga 184
>RF01058;MIR806;AAAA02006403.1/1537-1777 39946:Oryza sativa Indica
Group
Length = 241
Score = 204 bits (103), Expect = 4e-52
Identities = 148/163 (90%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 78 ttaaataattatttattctttttatatcatttaattcattgttaaatatattttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||| ||||||||| | |||||| ||||| ||||||||||||| || ||
Sbjct: 138 cacatatagttttatatatttcacaattttttttaaataaaacgaacggtcaaatatatg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 198 ctaaaaagttaacagtgtcaaatattttgaaacggagggagta 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||| | | ||||||||| | | ||||| | |||||
Sbjct: 238 ctccctccgtttcaaaatatttgacactgttaactttttagcatatatttgaccgttcgt 179
Query: 63 tttatt 68
||||||
Sbjct: 178 tttatt 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||||||||| || || ||| | || || |||||| ||| |||||||||||||
Sbjct: 76 ttttttgaataagacaaatcgttaaatacgtactcaaaagttaactttgtcaaacatttt 17
Query: 226 gaaacgga 233
||||||||
Sbjct: 16 gaaacgga 9
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 204 bits (103), Expect = 4e-52
Identities = 199/232 (85%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||| |||||||||||| ||||| |||| ||||| |||| ||| ||||||| |||| ||
Sbjct: 4 ctccccccgtttcaaaatatttgaaaccgttgactgtttaatacatgtttgaccatttgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64 cttattt-aaaaagtttaagtaattatttattcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||| ||| ||| || || ||||||||||||||| || |||||||||||||||
Sbjct: 123 atatatttttatgcacatatataattttacatatttcacaaaaaattttgaataagacga 182
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 234
| ||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 183 atggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggag 234
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| |||||||| || |||||||||||| |||| |||||||||| ||||| ||||||
Sbjct: 75 tttttaaataagacaaatggtcaaacatgtattaaacagtcaacggtttcaaatattttg 16
Query: 227 aaacggagggagta 240
|||||| |||||||
Sbjct: 15 aaacggggggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||||||||| |||||||||| ||||||||||| || | ||||| ||||||| |||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccattcgtctta 175
Query: 67 ttc 69
|||
Sbjct: 174 ttc 172
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 204 bits (103), Expect = 4e-52
Identities = 149/163 (91%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||| ||||||| |||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 76 ttaagaaattattaattcttttcctatcatttgatttattgttaaatatacttttatgta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 136 tacatatagttttacatatttcac-aatttttttgaataagacgaacggttaaacatgtg 194
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||| |||| ||||||||| |||||
Sbjct: 195 ctaaaaagtcaacggtgtcaaatatttagaaacggagagagta 237
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
||||||||| |||| |||||||||| ||||||||||| || ||||| | | ||||| |||
Sbjct: 231 ctccgtttctaaatatttgacaccgttgactttttagcacatgtttaaccgttcgtctta 172
Query: 67 ttc 69
|||
Sbjct: 171 ttc 169
>RF01058;MIR806;AAAA02007628.1/21696-21454 39946:Oryza sativa Indica
Group
Length = 243
Score = 204 bits (103), Expect = 4e-52
Identities = 192/223 (86%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||| | | |||| |||||| || ||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatatttgacactgttaacttgttagtatgtatttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||| ||| | ||||||||||||| ||||||||
Sbjct: 64 cttattcaaaaaaatttaagtaattatttatacttctcatatcatttgatttattgttaa 123
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||||
Sbjct: 124 atatactttcatatacacatatagttttacatatttca--tattttttttaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||| || |||||| ||||||||||||||||||||
Sbjct: 182 acggtcaaacatatgttaaaaaatcaacggtgtcaaacatttt 224
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| ||||||| | | |||| |||| ||| |||||||| |||||
Sbjct: 76 ttttttgaataagacgaatggtcaaatacatactaacaagttaacagtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01062;MIR812;AACV01006600.1/44361-44190 39947:Oryza sativa
Japonica Group
Length = 172
Score = 202 bits (102), Expect = 2e-51
Identities = 157/174 (90%), Gaps = 4/174 (2%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||||||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttattt-aaaaaatttaagtaattatttat 114
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 113 tctttttatatcatttgattcattgttaaatatactttcgtgtacaca--tagttttaca 56
Query: 154 tatttcactaac-ttttttgaataagacgaacggtcaaacatgtgctaaaaagt 206
|||||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 55 tatttcacaaactttttttaaataagacgaacggtcaaacatgtgctaaaaagt 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||| ||||||||||| ||||||||| || ||||||||||
Sbjct: 131 ttttttaaataagacgaatggtcaaacacgtactaaaaagtc 172
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 202 bits (102), Expect = 2e-51
Identities = 123/130 (94%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||
Sbjct: 130 ttaagtaattatttattcttttcatatcatttgattcattattaaatatactttcacgta 71
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 70 cacatatagttttacatatttcataaaattttttgaataagacgaacggtcaaacatgtg 11
Query: 198 ctaaaaagtc 207
||||||||||
Sbjct: 10 ctaaaaagtc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 167 tttttgaataagacgaacggtcaaaca 193
||||||||||||||||| |||||||||
Sbjct: 133 tttttgaataagacgaatggtcaaaca 159
>RF01058;MIR806;AAAA02006649.1/21379-21617 39946:Oryza sativa Indica
Group
Length = 239
Score = 200 bits (101), Expect = 6e-51
Identities = 208/240 (86%), Gaps = 7/240 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||| |||||||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 4 ctccctccattttaaaatgtttgacaccgttaacttttta-tacgtgtttgaccattcgt 62
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| | || ||||||||| ||||||| ||||||||| ||| ||||||||
Sbjct: 63 tttattt-aaaaaaatcaaataattatttgttcttttcatatcatttaatttattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaata--agac 180
||||||||| |||||||||| |||||||||||||| || || ||||||||||| ||||
Sbjct: 122 atatacttttatgtacacat--agttttacatattttac-aatttttttgaatataagac 178
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 179 aaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggagta 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||| ||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 75 ttttttaaataaaacgaatggtcaaacacgta-taaaaagttaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
||| ||||||||||
Sbjct: 16 aaaatggagggagta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||| |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 236 ctccctccatttcaaaatgtttgacaccgttgactttttagcacatgttt 187
>RF01058;MIR806;AACV01014691.1/845-606 39947:Oryza sativa Japonica
Group
Length = 240
Score = 200 bits (101), Expect = 6e-51
Identities = 198/230 (86%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 11 gtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattcc 70
||||||||||||||||| ||| ||||||||||||||| |||||| ||||| | ||||||
Sbjct: 12 gtttcaaaatgtttgaccccgttgactttttagtacgggtttgaccattcatcttattc- 70
Query: 71 nnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatactt 130
|||||||||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct: 71 aaaaaatttaagtaattatttattcttttcatattatttgatttattgttaaatatactt 130
Query: 131 tcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaa 190
|||| ||||||| |||||||||||||||||| || |||||| ||||||||||||||| ||
Sbjct: 131 tcatttacacatatagttttacatatttcac-aaattttttaaataagacgaacggttaa 189
Query: 191 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| | |||||| |||||| |||||||| ||||| |||| ||||||||
Sbjct: 190 gcatatactaaaatgtcaacagtgtcaaatattttaaaacaaagggagta 239
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| |||||||| || ||||||||||||||| ||||||||||||
Sbjct: 76 ttttttgaataagatgaatggtcaaacccgtactaaaaagtcaacggggtcaaacatttt 17
Query: 226 gaaac 230
|||||
Sbjct: 16 gaaac 12
>RF01058;MIR806;AP008215.1/601195-601435 39947:Oryza sativa Japonica
Group
Length = 241
Score = 200 bits (101), Expect = 6e-51
Identities = 151/164 (92%), Gaps = 4/164 (2%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||| || ||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 80 ttaagtaattatttttt--tttcatatcatttaatttattgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttg-aataagacgaacggtcaaacatgt 196
||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 138 cacatatagttttacatatttca-taacttttttttaataagacgaacggtcaaacatgt 196
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| |||||||||||||||||||||| |||| |||||
Sbjct: 197 gctaaaaagttaacggtgtcaaacattttgaaatggagcgagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||| |||||||||||||||||||| | ||||||||| || ||||||| | ||||| |||
Sbjct: 234 ctccatttcaaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtctta 175
Query: 67 tt 68
||
Sbjct: 174 tt 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct--aaaaagtcaacggtgtcaaacatt 223
|||||| ||||||||||| |||||||| || || |||||| ||||| ||||||||||
Sbjct: 78 ttttttaaataagacgaatagtcaaacacgtactttaaaaagctaacggcgtcaaacatt 19
Query: 224 ttgaaacgga 233
|| |||||||
Sbjct: 18 ttaaaacgga 9
>RF01058;MIR806;AAAA02032598.1/5908-6144 39946:Oryza sativa Indica
Group
Length = 237
Score = 198 bits (100), Expect = 3e-50
Identities = 148/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 76 ttaagtaattatttattttttttat--catttaatccattgttaaatatactttcatgta 133
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 134 tacatatagttttacatatttcataaaatttttggaataagacgaacggtcaaacatatg 193
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 194 ctaaaaagtcaacggtatcaaacattcagaaacggagggagta 236
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||||||||| |||| ||||||||||| | ||||||| | |||||
Sbjct: 234 ctccctccgtttctgaatgtttgataccgttgactttttagcatatgtttgaccgttcgt 175
Query: 63 tttattcc 70
|||||||
Sbjct: 174 cttattcc 167
Score = 54.0 bits (27), Expect = 9e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||||| | ||||||||||| | |||||| ||||
Sbjct: 75 tttttttaataagacgaatggtcaaacatatttaaaaaagtcaacag-gtcaaatattta 17
Query: 226 gaaacggagggagta 240
|||||| ||||||||
Sbjct: 16 gaaacgaagggagta 2
>RF01058;MIR806;AACV01002983.1/10960-10719 39947:Oryza sativa
Japonica Group
Length = 242
Score = 198 bits (100), Expect = 3e-50
Identities = 149/164 (90%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 78 ttaagtaattattaattcttttcatattatttgattcattgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
|||| |||||||| ||||||||| || |||||| ||||| ||||||||||||||||||
Sbjct: 138 tacatatagttttatatatttcacatattttttttaaataaaacgaacggtcaaacatgt 197
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 198 gctaaaaagtcaacgatgttaaacatttaaaaacggagggagta 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| |||||||| ||| || ||||||||||| || ||||||| | |||||
Sbjct: 239 ctccctccgtttttaaatgtttaacatcgttgactttttagcacatgtttgaccgttcgt 180
Query: 63 tttatt 68
||||||
Sbjct: 179 tttatt 174
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 196 bits (99), Expect = 1e-49
Identities = 147/163 (90%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 71 ttaagtaattattaattttttttctatcatttgatttattgttaaatatattttcatgta 130
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| || ||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 131 tacatataattttacatatttcacaaaattttttgaataagacgaacggtcaaacatatg 190
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 191 ttaaaaagtcaacggtgtcaaatatttaaaaacggagagagta 233
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| ||||| | |||| ||||||||||||||||||||
Sbjct: 42 aaaaagttaacggcgccaaatattttgaaacggagggagta 2
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 145/159 (91%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 78 taagtaattattaattattttcctatcatttgattcattgttaaatatactttcatgtat 137
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
| || |||||||||||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 138 atatatagttttacatatttcacagaattttttgaataagataaacggtcaaacatgtgc 197
Query: 199 -taaaaagtcaacggtgtcaaacattttgaaacggaggg 236
|||||||||||||||||||||||||| |||||||||||
Sbjct: 198 ttaaaaagtcaacggtgtcaaacatttagaaacggaggg 236
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||| ||||||||||||||| ||||||||||
Sbjct: 236 ccctccgtttctaaatgtttgacaccgttgacttttta 199
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 196 bits (99), Expect = 1e-49
Identities = 202/236 (85%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag-tacgtgtttgatcattcg 61
|||||||| ||| |||||||||||||||| | |||||| | ||||||| ||| ||||||
Sbjct: 4 ctccctccattttaaaatgtttgacaccgttaacttttaaaatacgtgtgtgaccattcg 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| ||||| || ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 tcttattaaaaaaattttgagtaattatttattcttttcatatcatttgattcattgtta 123
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||| ||||||| | |||| |||||||| ||||||||| | |||||| ||||| |||
Sbjct: 124 aatatattttcatgcatacatatagttttatatatttcacagattttttttaataatacg 183
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca-ttttgaaacggaggg 236
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 184 aacggtcaaacatgtgttaaaaagtcaacggtgttaaacatttttgaaacggaggg 239
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 201 aaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| |||||||||||||||||| ||| ||||||||||
Sbjct: 41 aaaagttaacggtgtcaaacattttaaaatggagggagta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 5 ccctccgtttc-aaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
||||||||||| ||||||||| |||||| |||||||||| || ||||||| | |||||
Sbjct: 239 ccctccgtttcaaaaatgtttaacaccgttgactttttaacacatgtttgaccgttcgta 180
Query: 64 ttatt 68
|||||
Sbjct: 179 ttatt 175
>RF01058;MIR806;AP008209.1/33469259-33469499 39947:Oryza sativa
Japonica Group
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 126/135 (93%)
Strand = Plus / Plus
Query: 106 atttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaac 165
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||
Sbjct: 106 atttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaa 165
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 166 ttttttaaataagacgaacggttaaatatgtgctaaaaagtcaatggtgtcaaacattta 225
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 226 gaaacggagggagta 240
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||||||||| |||||||||||||| |||||||||||
Sbjct: 238 ctccctccgtttctaaatgtttgacaccattgactttttag 198
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||||| | ||||| ||||||| |||||| ||||
Sbjct: 76 tttttttaataagacgaatggtcaaacatatttaaaaaaatcaacggcgtcaaatatttg 17
Query: 226 gaaacggagggagta 240
| |||||| ||||||
Sbjct: 16 ggaacggatggagta 2
>RF01058;MIR806;AAAA02031935.1/254-13 39946:Oryza sativa Indica
Group
Length = 242
Score = 196 bits (99), Expect = 1e-49
Identities = 207/240 (86%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| |||||||||| |||||| ||||||| || |||| ||||||
Sbjct: 4 ctccctccatttcaaaatctttgacaccgttgacttcttagtacatgcttgaccattcgg 63
Query: 63 tttattccnnnnnnnttaagtaattatttattcttttt-at-atcatttgattcattgtt 120
|||||| ||||| ||||||||||| || || || ||||| ||||| ||||||
Sbjct: 64 cttattc-aagaaatttaagcaattatttatttttgttcatcatcatctgatttattgtt 122
Query: 121 aaatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagac 180
|||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||
Sbjct: 123 aaatatactttcatgtacacatatagttttacatatttcacaatttttgttgaataagat 182
Query: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaacggtcacacatgtgat-aaaagtcaacggtgtcaaacattttgaaacggagggagta 241
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 170 ttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
||||||||| |||| |||||| ||||| |||| ||||||||||||||||| |||||||||
Sbjct: 72 ttgaataagccgaatggtcaagcatgtactaagaagtcaacggtgtcaaagattttgaaa 13
Query: 230 cggagggagta 240
||||||||||
Sbjct: 12 tggagggagta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttt 40
||||||||||||||||||||||||||||| ||||||||
Sbjct: 239 ctccctccgtttcaaaatgtttgacaccgttgactttt 202
>RF01058;MIR806;AAAA02026273.1/286-45 39946:Oryza sativa Indica
Group
Length = 242
Score = 194 bits (98), Expect = 4e-49
Identities = 210/243 (86%), Gaps = 10/243 (4%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||| ||||||||| |||||| |||||||||| |||||||||| |||||||
Sbjct: 4 ctccctcccttttaaaatgttttacaccgttgactttttaacacgtgtttgaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 64 cttattc-aataaatttaagtaattatttattcttttcatatcatttgatttattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacat----atttcactaacttttttgaataag 178
|||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 123 atatactttcatgtacacatatagttttacatattaatttcac--actttttt-aataag 179
Query: 179 acgaacggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||||| |||||||| | ||||||||||| || || ||| |||||||||||||||||
Sbjct: 180 acgaacggttaaacatgtacttaaaaagtcaatggcgt-aaatattttgaaacggaggga 238
Query: 238 gta 240
|||
Sbjct: 239 gta 241
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 170 ttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
|||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| |||
Sbjct: 72 ttgaataagacgaatggtcaaacacgtgttaaaaagtcaacggtgtaaaacattttaaaa 13
Query: 230 cggagggagta 240
||||||||||
Sbjct: 12 gggagggagta 2
>RF01058;MIR806;AAAA02018392.1/9429-9624 39946:Oryza sativa Indica
Group
Length = 196
Score = 194 bits (98), Expect = 4e-49
Identities = 130/138 (94%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 56 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatata 115
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||||||||||||||||| ||| |||||| ||||||||||| ||||||| |||||
Sbjct: 116 cacatatagttttacatatttca-taaatttttt-aataagacgaaaggtcaaatatgtg 173
Query: 198 ctaaaaagtcaacggtgt 215
||||||||||||||||||
Sbjct: 174 ctaaaaagtcaacggtgt 191
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaa 209
|||||| || |||||||| ||||||||| ||| |||||||||||
Sbjct: 54 ttttttaaacaagacgaatggtcaaacacgtgttaaaaagtcaa 11
>RF01058;MIR806;AACV01015075.1/1512-1276 39947:Oryza sativa Japonica
Group
Length = 237
Score = 194 bits (98), Expect = 4e-49
Identities = 205/238 (86%), Gaps = 5/238 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||||||||| ||| | |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgttttt-accattcgt 62
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 63 tttatt--taaaaaattaagtaattatttattcttttcatatcatttgattcattgttaa 120
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||||| || || || | ||||||||||||| | | |||||| ||||||||||
Sbjct: 121 atatactttcacgtgcagat-aaaatttacatatttca-tgaatttttttaataagacga 178
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||| ||||||||||||||||| ||||| ||| ||||| |||||||| |||||
Sbjct: 179 atagtcaaatatgtgctaaaaagtcaaaggtgttaaatattttaaaacggagagagta 236
Score = 85.7 bits (43), Expect = 3e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 2
>RF01058;MIR806;AP003243.3/61784-62019 39947:Oryza sativa Japonica
Group
Length = 236
Score = 194 bits (98), Expect = 4e-49
Identities = 143/158 (90%)
Strand = Plus / Plus
Query: 83 taattatttattctttttatatcatttgattcattgttaaatatactttcatgtacacat 142
|||||||| ||| |||| || ||||||||||||||||||||||||||||||||| ||||
Sbjct: 78 taattattaattattttcctaccatttgattcattgttaaatatactttcatgtatacat 137
Query: 143 gtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaa 202
|||||||||||||||||| || |||||||||||||||||| | ||||||||||| ||||
Sbjct: 138 atagttttacatatttcacaaaattttttgaataagacgaatgatcaaacatgtggtaaa 197
Query: 203 aagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||||| ||||||||||||| |||||||||||||||
Sbjct: 198 aaatcaacagtgtcaaacatttagaaacggagggagta 235
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||||||||||||| | ||| |||||| || |||||||||||||||
Sbjct: 233 ctccctccgtttctaaatgtttgacactgttgattttttaccacatgtttgatcattcgt 174
Query: 63 tttattc 69
||||||
Sbjct: 173 cttattc 167
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||||| | ||||||| |||||||||||| |||
Sbjct: 77 tttttttaataagacgaatggtcaaacatattttaaaaagataacggtgtcaaatattaa 18
Query: 226 gaaacggagggag 238
|||||||||||||
Sbjct: 17 gaaacggagggag 5
>RF01058;MIR806;AP008217.1/25855512-25855275 39947:Oryza sativa
Japonica Group
Length = 238
Score = 194 bits (98), Expect = 4e-49
Identities = 147/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 77 taagtaattattaattatttttctatcatttgattcattgttaaatatactttcatgtat 136
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
| || || ||||||||||||||| || |||||||||||||||||||||||||||| |||
Sbjct: 137 atatataattttacatatttcac-aaaatttttgaataagacgaacggtcaaacatatgc 195
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||| |||||||||||| |||| ||||| |||||||||
Sbjct: 196 taaaaagttaacggtgtcaaatatttggaaacagagggagta 237
>RF01058;MIR806;AAAA02009185.1/29593-29833 39946:Oryza sativa Indica
Group
Length = 241
Score = 194 bits (98), Expect = 4e-49
Identities = 205/239 (85%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| |||||||||| | |||||| |||| |||||||| |||| ||
Sbjct: 4 ctccctccatttcaaaatatttgacaccgttaacttttcagtatgtgtttgaccatttgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||||| ||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 64 tttattc-taaaaatttaagtaattatttatttttttcatattatttgattcattgttcg 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcacta-acttttttgaataagacg 181
||||||||| || ||||||| |||||||||||||||||| | |||||| |||||||||
Sbjct: 123 atatacttttatatacacatatagttttacatatttcacaattttttttttaataagacg 182
Query: 182 aacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||| | |||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 183 aacggtcaaac-tatgctaaaaagtcaacggtgtcaaatatttagaaacgaagggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||| |||||| || || ||||||||| | || |||||| |||||||||||| |||||
Sbjct: 76 tttttagaataaaacaaatggtcaaacacatactgaaaagttaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||| ||||||||||
Sbjct: 16 gaaatggagggagta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||| |||||| |||| |||||||||| |||||||||||
Sbjct: 238 ctcccttcgtttctaaatatttgacaccgttgactttttag 198
>RF01058;MIR806;AACV01024800.1/18542-18302 39947:Oryza sativa
Japonica Group
Length = 241
Score = 194 bits (98), Expect = 4e-49
Identities = 143/158 (90%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 79 ttaagtaattattaattcttttcatatcatttgattcattgttaaatatatctttatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||| ||||||||| || |||||||||||||||||||||||||||| ||
Sbjct: 139 ggcatataattttatatatttcacaaaagtttttgaataagacgaacggtcaaacatctg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
||||||||||||||||||||||||||| ||||||||||
Sbjct: 199 ctaaaaagtcaacggtgtcaaacatttcgaaacggagg 236
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 223
|||||| ||||| ||||||||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 78 ttttttaaataaaacgaacggttaaacatgtgctaagaagtcaatggcgtcaaacatt 21
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
|||||||||| ||||||||||||||| ||||||||||| | ||||||| | ||||| ||
Sbjct: 236 cctccgtttcgaaatgtttgacaccgttgactttttagcagatgtttgaccgttcgtctt 177
Query: 66 attc 69
||||
Sbjct: 176 attc 173
>RF01058;MIR806;AP008207.1/25048910-25049151 39947:Oryza sativa
Japonica Group
Length = 242
Score = 194 bits (98), Expect = 4e-49
Identities = 204/237 (86%), Gaps = 6/237 (2%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||| |||||||||||||||| ||| |||||||||||| ||||| ||||| | |||
Sbjct: 8 ctccgttttaaaatgtttgacaccgttga-tttttagtacgtctttgaccattcatctta 66
Query: 67 ttccnnnnnnn--ttaagtaattatttattctttttatatcatttgattcattgttaaat 124
||| ||||||| |||||||||||||| ||||||||||||| ||||||||||
Sbjct: 67 ttcaaaaaaaaatttaagtagttatttattcttttcatatcatttgatttattgttaaat 126
Query: 125 atactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaac 184
|||||||||||||||||| |||||||| ||||||||| | |||||| |||||| ||||
Sbjct: 127 atactttcatgtacacatatagttttatatatttcac--aatttttttaataaggtgaac 184
Query: 185 ggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| |||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 185 agtcaaacatgtgcttaaaaaatcaactgtgtcaaacattttgaaatggagggagta 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| ||||||| | || ||||||| ||||||||||||||||||||
Sbjct: 75 ttttttgaataagatgaatggtcaaagacgtactaaaaa-tcaacggtgtcaaacatttt 17
Query: 226 gaaacggag 234
||||||||
Sbjct: 16 aaaacggag 8
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||| |||||||||||||||||| | ||| ||||||
Sbjct: 239 ctccctccatttcaaaatgtttgacacagttgatttttta 200
>RF01062;MIR812;CR855113.1/22090-22258 4530:Oryza sativa (rice)
Length = 169
Score = 192 bits (97), Expect = 2e-48
Identities = 153/170 (90%), Gaps = 4/170 (2%)
Strand = Plus / Minus
Query: 38 ttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttattctt 97
||||||||||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 166 ttttagtacgtgtttgaccattcgtcttattc--aaaaatttaagtaattatttattctt 109
Query: 98 tttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatt 157
|| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 108 ttcatatcatttgattcattgttaaatatac-ttcatgtacacatatagttttacatatt 50
Query: 158 tcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||| || |||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 49 tcac-aaatttttttaataagatgaacggtcaaacatgtgctaaaaagtc 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaa 203
||||||||||||||||| ||||||||| || ||||||
Sbjct: 130 tttttgaataagacgaatggtcaaacacgtactaaaa 166
>RF01062;MIR812;AACV01023217.1/3751-3923 39947:Oryza sativa Japonica
Group
Length = 173
Score = 192 bits (97), Expect = 2e-48
Identities = 154/174 (88%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||||||||||||||||| | ||||||| |||||| ||||||||||||||||
Sbjct: 173 gactttttagtacgtgtttaaccattcgtcttattc-aaaaaatttaagtaattatttat 115
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 114 ttttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttaca 55
Query: 154 tatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tatttcaaaaaaaaatttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| ||| ||||| || ||||||||||
Sbjct: 132 ttttttgaataagacgaatggttaaacacgtactaaaaagtc 173
>RF01058;MIR806;AC060755.9/90452-90213 4530:Oryza sativa (rice)
Length = 240
Score = 192 bits (97), Expect = 2e-48
Identities = 203/238 (85%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| ||||| |||| ||||||||||||| ||||||| ||||| |
Sbjct: 4 ctccctccatttcaaaatatttgataccgttgactttttagtatatgtttgaccattcat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||||| ||| |||||||| |||| ||||||||
Sbjct: 64 cttattt-aaaaaatttaagtaattatttattttttccatatcattcgattaattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||||||| || ||||||| |||||||||||||||||| || |||||| |||||||| |
Sbjct: 123 atatacttttatatacacatatagttttacatatttcac-aagtttttttaataagacaa 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 182 atggtcaaacatatgctaaaaagtcaatggtgtcaaacattttaaaacggagagagta 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| |||||||||| | |||||||||||||||| ||||| |||||
Sbjct: 76 ttttttaaataagatgaatggtcaaacatatactaaaaagtcaacggtatcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||| ||||||||||
Sbjct: 16 gaaatggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||| ||||||||||||||| ||||||||||| | ||||||| |||| || |||
Sbjct: 233 ctccgttttaaaatgtttgacaccattgactttttagcatatgtttgaccatttgtctta 174
Query: 67 tt 68
||
Sbjct: 173 tt 172
>RF01058;MIR806;AP003509.3/79102-78866 39947:Oryza sativa Japonica
Group
Length = 237
Score = 192 bits (97), Expect = 2e-48
Identities = 145/161 (90%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| |||||||| |||| |||||||||||||||||||||| |||||||| |
Sbjct: 76 aagtaattattaattcttttcctatcgtttgattcattgttaaatatacgttcatgtata 135
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| |||||||||||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct: 136 catatagttttacatatttcacaaaattttttgaataagacgaacgatcaaacatatgcg 195
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| | |||||||||||| |||||||| ||||||
Sbjct: 196 aaaaagtcaatgatgtcaaacatttagaaacggaaggagta 236
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 180 cgaacggtcaaacatgtgctaaaaagtcaac 210
||||||||||||||||| ||||||||||||
Sbjct: 62 cgaacggtcaaacatgttttaaaaagtcaac 32
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| |||||||| |||||||||||| | ||||||||| | | ||||||||| |||||
Sbjct: 234 ctccttccgtttctaaatgtttgacatcattgactttttcgcatatgtttgatcgttcgt 175
Query: 63 tttattc 69
||||||
Sbjct: 174 cttattc 168
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa Indica
Group
Length = 250
Score = 192 bits (97), Expect = 2e-48
Identities = 127/137 (92%)
Strand = Plus / Plus
Query: 104 tcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcacta 163
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
Sbjct: 113 tcatttgattcattgttaaatatactttcatgtacacgtatagttttacatatttcaaga 172
Query: 164 acttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 223
| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 173 attttttttaataagacgaacagttaaacatgtgctaaaaagtcaacggtgtcaaacatt 232
Query: 224 ttgaaacggagggagta 240
|||||| | ||||||||
Sbjct: 233 ttgaaatgaagggagta 249
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||| | |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 247 ctcccttcatttcaaaatgtttgacaccgttgactttttagcacatgttt 198
>RF01058;MIR806;AAAA02026229.1/38478-38703 39946:Oryza sativa Indica
Group
Length = 226
Score = 192 bits (97), Expect = 2e-48
Identities = 176/201 (87%), Gaps = 4/201 (1%)
Strand = Plus / Plus
Query: 37 tttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttattct 96
|||||||||||||||||| ||||||| ||||| ||||||||||||||||| |
Sbjct: 24 tttttagtacgtgtttgaccattcgtcttatt--aaaaaaattaagtaattatttattat 81
Query: 97 ttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatat 156
||| ||||||||||||| |||||||||||||||||||| || |||| |||||||| ||||
Sbjct: 82 tttcatatcatttgatttattgttaaatatactttcatatatacatatagttttatatat 141
Query: 157 ttcactaacttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgt 215
||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 142 ttcac-aaattttttaaataagacgaacggtcaaacatgtgctaaaaaaatcaacggagt 200
Query: 216 caaacattttgaaacggaggg 236
|||| ||||||||||||||||
Sbjct: 201 caaatattttgaaacggaggg 221
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaa 204
|||||| ||||||||||| ||||||||| || |||||||
Sbjct: 62 tttttttaataagacgaatggtcaaacacgtactaaaaa 24
>RF01058;MIR806;AP008215.1/9244991-9244779 39947:Oryza sativa
Japonica Group
Length = 213
Score = 192 bits (97), Expect = 2e-48
Identities = 146/161 (90%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 53 aagtaattattaattcttttcatatcatttgattcattgttaaatatatttttatgtagg 112
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| || ||||||||||||||| || |||||||||||||||||| ||||||||||||||
Sbjct: 113 catataattttacatatttcacaaaagtttttgaataagacgaac-gtcaaacatgtgct 171
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| ||||||||| |||| |||||||||||||||
Sbjct: 172 aaaaagtcaatggtgtcaaatatttcgaaacggagggagta 212
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||| |||| ||||||||| ||||||||||| || |||||||
Sbjct: 210 ctccctccgtttcgaaatatttgacaccattgactttttagcacatgtttga 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tgctccctccgtttcaaaatgtttgac 27
|||||||||||||||||||| ||||||
Sbjct: 2 tgctccctccgtttcaaaatatttgac 28
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaa 191
|||||| |||||||||||||||||||
Sbjct: 48 tttttttaataagacgaacggtcaaa 23
>RF01062;MIR812;AAAA02034426.1/30822-30993 39946:Oryza sativa Indica
Group
Length = 172
Score = 190 bits (96), Expect = 6e-48
Identities = 154/173 (89%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||||||||||||||||||| ||||||| |||||| |||| || ||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttattc-aaaaaatttaaatatttatttat 114
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
|||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 113 tcttttcatatcatttgattcattgttaaatatactttcatgtaca-atatagttttaca 55
Query: 154 tatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagt 206
|||||||| || |||||| |||||||||||||||||||||||| |||||||||
Sbjct: 54 tatttcacaaaatttttttaataagacgaacggtcaaacatgtactaaaaagt 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 131 ttttttgaataagacgaatggtcaaacacgtactaaaaagtc 172
>RF01058;MIR806;ABRL01002061.1/457-692 65489:Oryza barthii
Length = 236
Score = 190 bits (96), Expect = 6e-48
Identities = 146/163 (89%), Gaps = 6/163 (3%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||
Sbjct: 79 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatacttgtacgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||||||||||||||| || |||||| ||||||||||||||||||||||||
Sbjct: 139 ------tagttttacatatttcataaattttttttaataagacgaacggtcaaacatgta 192
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 193 ctaaaaagttaacggtgtcaaatattttgaaacggagggagta 235
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| |||||||||| | |||||||||||| ||||||| | |||||
Sbjct: 233 ctccctccgtttcaaaatatttgacaccgttaactttttagtacatgtttgaccgttcgt 174
Query: 63 tttatt 68
|||||
Sbjct: 173 cttatt 168
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc-aacggtgtcaaacattt 224
||||||||||||||| | ||| ||||| || ||||||||| ||||| ||||| |||||
Sbjct: 76 ttttttgaataagacaactggttaaacacgtcataaaaagtctaacggcgtcaa-cattt 18
Query: 225 tgaaacggagggagta 240
||||||||||||||||
Sbjct: 17 tgaaacggagggagta 2
>RF01058;MIR806;AP008207.1/17336421-17336659 39947:Oryza sativa
Japonica Group
Length = 239
Score = 190 bits (96), Expect = 6e-48
Identities = 142/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 75 ttaagtaattattaattctttttctatcatttgattcattgttaaatatacttacatgta 134
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
| || |||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 135 taaatatagttttacatatttcacaaaagttttttgaataagacgaacggtcaaacatgt 194
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacgg 232
| |||||||| |||| ||||||| |||| |||||||
Sbjct: 195 gataaaaagttaacgatgtcaaatatttagaaacgg 230
>RF01058;MIR806;AP002882.2/89577-89811 39947:Oryza sativa Japonica
Group
Length = 235
Score = 190 bits (96), Expect = 6e-48
Identities = 148/163 (90%), Gaps = 3/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 75 ttaagtaattatttattcttttcatatcattttattaattgttaaatatactttcatgta 134
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| || ||||||||||||||| || | |||| |||||||| |||||| ||||| |||
Sbjct: 135 caca--tatttttacatatttcac-aattatttttaataagacaaacggttaaacacgtg 191
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 192 ctaaaaagtcaacagtgtcaaacattttaaaacggagggagta 234
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||||||| |||||||||||||| | ||||||||||| ||||||||
Sbjct: 232 ctccctccgttttaaaatgtttgacactgttgactttttagcacgtgttt 183
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaaca 193
|||||||||||||||||| |||||||||
Sbjct: 73 ttttttgaataagacgaatggtcaaaca 46
>RF01058;MIR806;AAAA02018287.1/668-427 39946:Oryza sativa Indica
Group
Length = 242
Score = 190 bits (96), Expect = 6e-48
Identities = 167/189 (88%), Gaps = 3/189 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||||| |||| ||| |||||| || |||||||| |||||||
Sbjct: 4 ctccctccgtttcaaaatgtttga-accgttgattttttaatatgtgtttgaccattcgt 62
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 cttatta-aaaaaaattaagtaattatttattattttcatatcatttgattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 122 atatactttcatgtacacatatagttttacatatttca-taattttttttaataagacga 180
Query: 183 acggtcaaa 191
|||||||||
Sbjct: 181 acggtcaaa 189
Score = 77.8 bits (39), Expect = 6e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||||| | |||||| |||||||| |||||||||||
Sbjct: 75 tttttttaataagacgaatggtcaaacacatattaaaaaatcaacggt-tcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AAAA02007627.1/1870-2109 39946:Oryza sativa Indica
Group
Length = 240
Score = 190 bits (96), Expect = 6e-48
Identities = 202/236 (85%), Gaps = 4/236 (1%)
Strand = Plus / Plus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
||||||||||||||| |||| |||| ||| |||||||||||||||||| ||||||| ||
Sbjct: 7 cctccgtttcaaaatatttggcaccattgattttttagtacgtgtttgaccattcgtatt 66
Query: 66 attccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaata 125
||| || ||| ||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 67 att--aaaaaattttagtgattatttattcttttcatatcatttgattcattattaaata 124
Query: 126 tactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacg 185
|||||| |||||||||| |||||||||||||||||| || |||||| |||||||| ||||
Sbjct: 125 tacttttatgtacacatatagttttacatatttcac-aaatttttttaataagacaaacg 183
Query: 186 gtcaaacatgtg-ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| ||||||||| |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 184 attaaacatgtgtttaaaaaataaacggtgttaaacattttgaaacggaaggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 158 tcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 217
||||||| ||||| ||||| ||||| ||||||||| || ||||||| |||| |||| ||
Sbjct: 84 tcactaaaattttttaataatacgaatggtcaaacacgtactaaaaaatcaatggtgcca 25
Query: 218 aacattttgaaacggagggagta 240
|| ||||||||||||||| ||||
Sbjct: 24 aatattttgaaacggaggaagta 2
>RF01058;MIR806;AP008207.1/4618665-4618903 39947:Oryza sativa
Japonica Group
Length = 239
Score = 190 bits (96), Expect = 6e-48
Identities = 144/160 (90%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| |||| ||| || |||||||||||||||||||||||||||||||||
Sbjct: 77 taagtaattattaattcctttcttaccatttgattcattgttaaatatactttcatgtat 136
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| |||||||||||||||||| || ||||||||||||| || |||||||||||||
Sbjct: 137 acatatagttttacatatttcacaaaaaattttgaataagacaaatggtcaaacatgtgg 196
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggag 238
|||||||||||| ||||||||||||| |||||||||||||
Sbjct: 197 taaaaagtcaacagtgtcaaacatttagaaacggagggag 236
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 1 tgctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattc 60
||||||||||||||| ||||||||||||| | |||||||||| || ||||||| ||||
Sbjct: 238 tgctccctccgtttctaaatgtttgacactgttgactttttaccacatgtttgaccattt 179
Query: 61 gttttattc 69
|| ||||||
Sbjct: 178 gtcttattc 170
>RF01058;MIR806;AP008214.1/6309436-6309676 39947:Oryza sativa
Japonica Group
Length = 241
Score = 190 bits (96), Expect = 6e-48
Identities = 148/164 (90%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 77 ttaagtaattattaattatttttctatcatttgattcattgttaaatatatttttatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||||| || ||||||||||||||||||| ||||||||||||
Sbjct: 137 tacatatagttttatatatttcacaaaattttttgaataagacgaacagtcaaacatgtg 196
Query: 198 ct-aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||||| |||||||| |||||||||| ||||||||| |||||
Sbjct: 197 ctaaaaaaatcaacggtatcaaacatttcgaaacggagtgagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| ||| |||||| | ||||||||||| |||||||||||||
Sbjct: 76 tttttttaataagatgaatggttaaacatataataaaaagtcaatagtgtcaaacatttc 17
Query: 226 gaaacggagggagta 240
|||||||| ||||||
Sbjct: 16 gaaacggatggagta 2
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 188 bits (95), Expect = 2e-47
Identities = 144/159 (90%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 78 ttaagtaattattaattctttccctatcatttaattcattattaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||| |||||||| || |||||||||||||
Sbjct: 138 tacatatagttttacatatttcac-aaatttttttaataagacaaatggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggg 236
|||||||| |||||||||||||||||| |||||||||||
Sbjct: 197 ctaaaaagccaacggtgtcaaacatttagaaacggaggg 235
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttt 64
||||||||||| ||||||||||||||| || |||||||| || ||||||| |||| || |
Sbjct: 235 ccctccgtttctaaatgtttgacaccgttggctttttagcacatgtttgaccatttgtct 176
Query: 65 tatt 68
||||
Sbjct: 175 tatt 172
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 78 ttaagtaattattaattcctttcatatcatttgattcattgttaaatatatttttatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | ||||||||||||||| || || ||||||||||||||||| |||||||||| ||
Sbjct: 138 gacgtatagttttacatattttacaaaagtttttgaataagacgaatggtcaaacatatg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||| |||| |||||||| ||||||
Sbjct: 198 ctaaaaagtcaacggtgtcaaatatttagaaacggatggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| |||||||| |||| |||||||||| ||||||||||| | ||||||| |||||||
Sbjct: 238 ctccatccgtttctaaatatttgacaccgttgactttttagcatatgtttgaccattcgt 179
Query: 63 tttattc 69
||||||
Sbjct: 178 cttattc 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 168 ttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 227
|||| |||||||||||| |||||||||| ||||||| |||| ||||||||||| ||
Sbjct: 74 tttttaataagacgaacaatcaaacatgttaaaaaaagttaacgacgtcaaacatttaga 15
Query: 228 aacggagggagta 240
||||| |||||||
Sbjct: 14 aacggggggagta 2
>RF01058;MIR806;AC134230.2/30599-30357 39947:Oryza sativa Japonica
Group
Length = 243
Score = 188 bits (95), Expect = 2e-47
Identities = 147/163 (90%), Gaps = 6/163 (3%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 86 ttaagtaattatttatttttttcatatcatttgtttcattgttaaatatgttttcatgta 145
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||
Sbjct: 146 cacatatagttttacatatttcac-aaatttttttaataagacgaacg-----acatgtg 199
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 200 ctaaaaagtcaacggtatcaaacattttgaaacggagagagta 242
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 208 aacggtgtcaaacattttgaaacggagggagta 240
|||||||| ||||||||||||||||||||||||
Sbjct: 34 aacggtgttaaacattttgaaacggagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||||||||||||||||| |||| |||||||||||
Sbjct: 236 ctccgtttcaaaatgtttgataccgttgactttttag 200
>RF01058;MIR806;AAAA02021826.1/21037-21276 39946:Oryza sativa Indica
Group
Length = 240
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 77 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatacttatatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| ||||||||||| ||| || || ||||||||||||||||| |||||||||||||
Sbjct: 137 cacatatagttttacatgttttacaaaagtttttgaataagacgaatggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| ||||||||| |||| |||| |||| |||||
Sbjct: 197 ctaaaaagtcaagggtgtcaaatatttagaaatggagtgagta 239
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||| |||| |||| ||||||||| ||||||||||| || ||||||| ||||||| |||
Sbjct: 233 ctccatttctaaatatttgacacccttgactttttagcacatgtttgaccattcgtctta 174
Query: 67 ttc 69
|||
Sbjct: 173 ttc 171
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatacttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||||||||| ||| || ||||||||||||||||||||||||| |||||
Sbjct: 138 tacgtatagttttacatattccacaaaaatttttgaataagacgaacggtcaaatatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 198 gtaaaaagttaacggtgtcaaatatttagaaacggagggagta 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||||| |||| |||||||||| | ||||||||
Sbjct: 238 ctccctccgtttctaaatatttgacaccgttaacttttta 199
>RF01058;MIR806;AAAA02000149.1/12442-12684 39946:Oryza sativa Indica
Group
Length = 243
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 80 ttaagtaattattaattcttttcctattatttgattcattgttaaatatacttatatgta 139
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 140 tacatacagttttacatatttcacaaaaatttttgaataagacgaacggtcaaacatgtg 199
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| |||||||||||||| |||| |||| ||||| ||||
Sbjct: 200 ctaaaaaatcaacggtgtcaaatatttagaaagggaggaagta 242
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 74 ttaagtaattattaattcttttcatatcatttgattcattattaaatatactttcatgta 133
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| || ||||||||| |||||||| || ||| ||||| |||||||||||||||| ||
Sbjct: 134 tatatatagttttacttatttcacaaaaaaattttaataatacgaacggtcaaacatatg 193
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 194 ctaaaaagttaacggtgtcaaacatttagaaacggagggagta 236
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||||||||||||||| | ||||||||| | ||||||| | |||||
Sbjct: 234 ctccctccgtttctaaatgtttgacaccgttaactttttagcatatgtttgaccgttcgt 175
Query: 63 tttatt 68
|||||
Sbjct: 174 attatt 169
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 162 taacttttttgaataagacgaacggtcaaacatgtgctaaaaagt 206
|||||||||||||||| ||||| ||||||| |||| | |||||||
Sbjct: 76 taacttttttgaataaaacgaatggtcaaatatgttcaaaaaagt 32
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 145/162 (89%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||
Sbjct: 77 taagtaattattaattatttttatatcatttgattcatttttaaatatacttatatgtat 136
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
||| ||||||||||||||| | || ||| ||||||||||||||||||||||||||||
Sbjct: 137 gcatatagttttacatattttataaaagtttctgaataagacgaacggtcaaacatgtgc 196
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||| |||| |||||||||||||||
Sbjct: 197 caaaaagtcaacggtgtcaaatatttagaaacggagggagta 238
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| |||||||||| ||||||||| | || ||||||| | |||||
Sbjct: 236 ctccctccgtttctaaatatttgacaccgttgactttttggcacatgtttgaccgttcgt 177
Query: 63 tttattc 69
||||||
Sbjct: 176 cttattc 170
>RF01058;MIR806;AAAA02013694.1/9956-10195 39946:Oryza sativa Indica
Group
Length = 240
Score = 186 bits (94), Expect = 1e-46
Identities = 177/203 (87%), Gaps = 3/203 (1%)
Strand = Plus / Plus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttatt 68
|||||||||||||||| |||||| |||||||||||||||| ||||| ||||||| |||||
Sbjct: 8 ccgtttcaaaatgtttaacaccgttgactttttagtacgtatttgaccattcgtcttatt 67
Query: 69 ccnnnnnnnttaagtaattatttattcttttt-atatcatttgattcattgttaaatata 127
||||||||||||||||| ||||| ||||||||||||| ||| |||||||||
Sbjct: 68 t-aaaaaaattaagtaattatttattttttttcatatcatttgatttatttttaaatata 126
Query: 128 ctttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggt 187
||||||| ||||||| |||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 127 ctttcatatacacatatagttttacatatttcac-aaatttttttaataagacgaacggt 185
Query: 188 caaacatgtgctaaaaagtcaac 210
|||| || | |||||||||||||
Sbjct: 186 caaatatttactaaaaagtcaac 208
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||||||| | || |||||||||||||||||| |||||||||
Sbjct: 74 ttttttaaataagacgaatggtcaaatacgtactaaaaagtcaacggtgttaaacatttt 15
Query: 226 gaaacgg 232
|||||||
Sbjct: 14 gaaacgg 8
>RF01058;MIR806;AC133860.5/76754-76494 39947:Oryza sativa Japonica
Group
Length = 261
Score = 186 bits (94), Expect = 1e-46
Identities = 122/130 (93%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 111 attcattgttaaatatactttcatgtacacatgtagttttacatatttcactaacttttt 170
|||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||
Sbjct: 132 attcatggttaaatatactttcatatacacatatagttttacatatttca-taaattttt 190
Query: 171 tgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaac 230
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 191 tgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaac 250
Query: 231 ggagggagta 240
||||||||||
Sbjct: 251 ggagggagta 260
Score = 99.6 bits (50), Expect = 2e-20
Identities = 113/137 (82%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct: 3 ctccctccgttttaaaatgtttgacaccgttgactttttagtatgtgtttgactgttcgt 62
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
| ||||||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 63 -------caaaaaatttaagtaattatttatttttttcatatcatttgattcatggttaa 115
Query: 123 atatactttcatgtaca 139
|||||||||||| ||||
Sbjct: 116 atatactttcatataca 132
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 258 ctccctccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccattcgt 199
Query: 63 tttattc 69
||||||
Sbjct: 198 cttattc 192
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 178 gacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 63 gacgaacagtcaaacacatactaaaaagtcaacggtgtcaaacattttaaaacggaggga 4
Query: 238 g 238
|
Sbjct: 3 g 3
>RF01058;MIR806;AACV01022161.1/13533-13298 39947:Oryza sativa
Japonica Group
Length = 236
Score = 186 bits (94), Expect = 1e-46
Identities = 188/219 (85%), Gaps = 2/219 (0%)
Strand = Plus / Plus
Query: 22 tttgacaccgctgactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaa 81
|||||||||| |||| ||||| ||||||||||| ||||||| ||||| ||||
Sbjct: 19 tttgacaccgttgaccttttaatacgtgtttgaccattcgtcttatta-aaaaaatttaa 77
Query: 82 gtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacaca 141
||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||
Sbjct: 78 ataattatttattcttttcatattatttgattcattattaaatatactttcatgtacaca 137
Query: 142 tgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaa 201
||||||||||||||||| || ||||| |||||||||||| || |||||||||||||
Sbjct: 138 tgtagttttacatattt-tttatttttttaaaataagacgaacagttaaacatgtgctaa 196
Query: 202 aaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| | ||||||||||| ||||||||||||||
Sbjct: 197 aaagtcaacaatatcaaacattttaaaacggagggagta 235
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaa 219
|||||| ||||||||||| ||||||||| || ||||| |||||||||||||||
Sbjct: 72 tttttttaataagacgaatggtcaaacacgtattaaaaggtcaacggtgtcaaa 19
Score = 44.1 bits (22), Expect = 9e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||||||| ||||||||||| | | ||||||||||| || |||||
Sbjct: 233 ctccctccgttttaaaatgtttgatattgttgactttttagcacatgttt 184
>RF01058;MIR806;AC105928.2/57418-57177 39947:Oryza sativa Japonica
Group
Length = 242
Score = 186 bits (94), Expect = 1e-46
Identities = 149/165 (90%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 78 ttaagcaattatttattcttttcatatcatttaattcattgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttga--ataagacgaacggtcaaacatg 195
||||| ||||||||||||||||| ||| |||||| | ||||||||||| |||||||||
Sbjct: 138 cacatatagttttacatatttca-taattttttttaatataagacgaacagtcaaacata 196
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||| |||||||| |||||||||| |||||||||
Sbjct: 197 tattaaaaagtcaacagtgtcaaatattttgaaacagagggagta 241
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| ||||||||| || |||||| | |||||||| || |||||
Sbjct: 76 ttttttaaataagatgaatggtcaaacacgtattaaaaaattaacggtgtgcaatatttt 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
>RF01062;MIR812;AP008217.1/21142327-21142498 39947:Oryza sativa
Japonica Group
Length = 172
Score = 184 bits (93), Expect = 4e-46
Identities = 154/174 (88%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 172 gacttcttagtacgtgtttgaccattcgtcttattc-aaaaaatttaagtaattatttat 114
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
| |||| ||||||||||||||||||||||||||||||| || ||||||| || |||||||
Sbjct: 113 tattttcatatcatttgattcattgttaaatatacttttatatacacatataattttaca 54
Query: 154 tatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 53 tatttcac-aaatttttttaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| ||||||||| || |||| |||||
Sbjct: 131 ttttttgaataagacgaatggtcaaacacgtactaagaagtc 172
>RF01058;MIR806;AAAA02002805.1/52701-52461 39946:Oryza sativa Indica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 142/157 (90%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||
Sbjct: 79 ttaagtaattatttatttttttcatatcatttaattcattgttaaatatactttcacata 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||| |||| |||||| || || |||||| |||||||||||||||||||||||||
Sbjct: 139 tacatatagatttatatattttacaaattttttt-aataagacgaacggtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggag 234
||||||||| |||||||||||||||||| ||||||||
Sbjct: 198 ctaaaaagttaacggtgtcaaacattttaaaacggag 234
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||| |||||||||||||||| | ||||||||| || ||||||| | ||||| |||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtctta 175
Query: 67 tt 68
||
Sbjct: 174 tt 173
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||||||| ||||||||| ||| | ||||||| ||| ||||||||||||
Sbjct: 76 tttttttaataagacgaatggtcaaacacgtgtttaaaaagttaact-tgtcaaacattt 18
Query: 225 tgaaacggagggagta 240
| ||||||||| ||||
Sbjct: 17 taaaacggaggaagta 2
>RF01058;MIR806;AP004140.3/16042-16282 39947:Oryza sativa Japonica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 138/153 (90%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttgatttattgttaaatatacttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||||| ||||| |||||||||| |||||
Sbjct: 138 tacatatagttttacatatttcacaaaagtttttgaaaaagacaaacggtcaaatatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaac 230
|||||||||||||||||||||| |||| |||||
Sbjct: 198 ctaaaaagtcaacggtgtcaaatatttagaaac 230
>RF01058;MIR806;AAAA02019059.1/8776-9013 39946:Oryza sativa Indica
Group
Length = 238
Score = 184 bits (93), Expect = 4e-46
Identities = 144/160 (90%), Gaps = 2/160 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 77 ttaagtaattattaattcttttcctatcattcgattcgttgttaaatatactttcatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||| |||||||||| || |||| ||||||||||||||| |||||||||
Sbjct: 137 tacatatagttttccatatttcacaaatatttt--aataagacgaacggttaaacatgtg 194
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 195 ctaaaaaatcaacggtgtcaaacatttagaaacggaggga 234
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
|||||||||||| ||||||||||||||| ||| ||||||| || |||||
Sbjct: 234 tccctccgtttctaaatgtttgacaccgttgattttttagcacatgttt 186
>RF01058;MIR806;AACV01022578.1/12222-12463 39947:Oryza sativa
Japonica Group
Length = 242
Score = 184 bits (93), Expect = 4e-46
Identities = 132/145 (91%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 75 ttaagtaattattaatttttttcttatcatttgattcattgttaaatatactttcatgta 134
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||| ||| || |||||||||||||||||||||||||| |||||
Sbjct: 135 tacatatagttttacatattacacaaatttttttgaataagacgaacggtcaaatatgtg 194
Query: 198 ctaaaaagtcaacggtgtcaaacat 222
||||||||||||||| | ||||||
Sbjct: 195 ttaaaaagtcaacggtattaaacat 219
>RF01062;MIR812;AP002537.2/60669-60502 39947:Oryza sativa Japonica
Group
Length = 168
Score = 182 bits (92), Expect = 2e-45
Identities = 120/128 (93%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aagtaattatttatttttttcatatcatttgattcattgttaaatatactttcatgtaca 68
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| |||||||| |||||||| ||| |||||| ||||||||||||||||||| |||||||
Sbjct: 67 catatagttttatatatttca-taaatttttttaataagacgaacggtcaaatatgtgct 9
Query: 200 aaaaagtc 207
||||||||
Sbjct: 8 aaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||| ||||||||||| ||||||||| |||||||||||||
Sbjct: 127 ttttttaaataagacgaatggtcaaacacgtgctaaaaagtc 168
>RF01058;MIR806;AAAA02035816.1/5791-6029 39946:Oryza sativa Indica
Group
Length = 239
Score = 182 bits (92), Expect = 2e-45
Identities = 149/164 (90%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| || ||||||||||||||||||||||||||| || ||
Sbjct: 77 ttaagtaattattaattattttcctaccatttgattcattgttaaatatacttttatata 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||
Sbjct: 137 tacatatagttttacatatttca-taa-tttttttaataagacgaacggtcaaatatgtg 194
Query: 198 c-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 195 cttaaaaagtcaacggtgtcaaacatttagaaacggagggagta 238
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 236 ctccctccgtttctaaatgtttgacaccgttgacttttta 197
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 182 bits (92), Expect = 2e-45
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 55 ttaagtaattattaattcttttcctatcatttaattcattgttaaatatacttatatgta 114
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 115 tacatatagttttatatatttcacaaaagtttttgaataagacgaacggtcaaacatgtg 174
Query: 198 ctaaaaagtcaacggtgtca 217
||||||||||||||||||||
Sbjct: 175 ctaaaaagtcaacggtgtca 194
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacat 194
|||||||||||||||||||||| ||||||
Sbjct: 53 ttttttgaataagacgaacggttaaacat 25
Score = 44.1 bits (22), Expect = 9e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 24 tgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||||| ||||||||||| || ||||||| | ||||| ||||||
Sbjct: 194 tgacaccgttgactttttagcacatgtttgaccgttcgtcttattc 149
>RF01058;MIR806;AP008212.1/26338977-26339216 39947:Oryza sativa
Japonica Group
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 194/229 (84%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
|||||||||||||| ||||| |||| ||||||||||||| |||||||| |||| | |||
Sbjct: 8 ctccgtttcaaaatatttgataccgttgactttttagtatgtgtttgaccatttatctta 67
Query: 67 ttccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatat 126
|| ||||||||||||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 68 ttt-aaaaaatttaagtaattatttattatttttatattatttgattcattattaaatat 126
Query: 127 actttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacgg 186
||||| ||||||| || ||||||||||||||| | || |||||| ||||| ||||| ||
Sbjct: 127 acttttatgtacatatatagttttacatattttataaaatttttttaataaaacgaatgg 186
Query: 187 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
| ||| |||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 187 ttaaatatgtgctaaaaaattaacggtgtcaaacaatttgaaacggagg 235
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| || ||||||||| | |||||||||||||||| ||||| |||||
Sbjct: 76 ttttttaaataagataaatggtcaaacacatactaaaaagtcaacggtatcaaatatttt 17
Query: 226 gaaacggagggagta 240
||||||||| |||||
Sbjct: 16 gaaacggagtgagta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttt 65
||||||||||||| |||||||||||| | | ||||||| || | ||| | ||||||||||
Sbjct: 235 cctccgtttcaaattgtttgacaccgttaattttttagcacatatttaaccattcgtttt 176
Query: 66 att 68
|||
Sbjct: 175 att 173
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 182 bits (92), Expect = 2e-45
Identities = 143/160 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 77 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||| |||||| || || ||||||||||||||||||||| |||||||||
Sbjct: 137 ggcatataattttatatattttacaaaagtttttgaataagacgaacggttaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||||||| ||||||||||||||| |||||||
Sbjct: 197 ctaaaaagtcaacggtatcaaacattttgaaatggaggga 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
|||||||||||||||||||||||||||| || |||||||||| ||| ||||| ||||
Sbjct: 75 ttttttgaataagacgaacggtcaaacaggtttaaaaaagtcaatggtatcaaatattt 17
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
||||||| ||||||||||||||| |||| ||||||||||| || ||||| | | |||||
Sbjct: 236 tccctccatttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttcgtc 177
Query: 64 ttattc 69
||||||
Sbjct: 176 ttattc 171
>RF01058;MIR806;AAAA02007632.1/1496-1239 39946:Oryza sativa Indica
Group
Length = 258
Score = 182 bits (92), Expect = 2e-45
Identities = 148/164 (90%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 95 ttaaataattatttatttttttcatatcatttgattcattgttaaatatactttcatata 154
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| | |||||||||||||||| || |||||| |||||||||||||||||||||| |
Sbjct: 155 cacatatggttttacatatttcacaaaatttttt-aataagacgaacggtcaaacatata 213
Query: 198 c-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 214 cttaaaaagtcaacagtatcaaatattttgaaacggagagagta 257
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaaca 193
|||||||||||||||||| |||||||||
Sbjct: 93 ttttttgaataagacgaatggtcaaaca 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 199 taaaaagtcaacggtgtcaaacattttgaaa 229
|||||||||||||| || |||||||||||||
Sbjct: 51 taaaaagtcaacggcgtgaaacattttgaaa 21
>RF01062;MIR812;AP008207.1/12546112-12545941 39947:Oryza sativa
Japonica Group
Length = 172
Score = 180 bits (91), Expect = 6e-45
Identities = 115/123 (93%)
Strand = Plus / Minus
Query: 82 gtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacaca 141
|||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 126 gtaattatttattcttttcatatcatttgattcattgttaaatacacttttatgtacaca 67
Query: 142 tgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaa 201
| |||||||||||||||||| || |||||| ||||||||||||||||||||||| |||||
Sbjct: 66 tatagttttacatatttcacaaattttttttaataagacgaacggtcaaacatgcgctaa 7
Query: 202 aaa 204
|||
Sbjct: 6 aaa 4
>RF01058;MIR806;AAAA02002143.1/37318-37554 39946:Oryza sativa Indica
Group
Length = 237
Score = 180 bits (91), Expect = 6e-45
Identities = 145/162 (89%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| |||||||| ||||| |||||| ||| |||||||||||||||||||
Sbjct: 77 taagtaattattaattcttttcctatcaattgatttattattaaatatactttcatgtat 136
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| |||||||||||||||| | | |||||| ||||||||||||| ||||||||||||
Sbjct: 137 acatatagttttacatatttcgc--agtttttttaataagacgaacgctcaaacatgtgc 194
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 195 taaaaagttaacggtgtcaaacatttagaaacgaagggagta 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| ||||||||||| ||||||||||||| |||||| ||||
Sbjct: 75 tttttttaataagatgaatagtcaaacatgtttaaaaaagtcaacggcgtcaaatattta 16
Query: 226 gaaacggaggg 236
|||||||||||
Sbjct: 15 gaaacggaggg 5
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||| |||||| ||||||||||||||| | ||||||||| || ||||||| | |||||
Sbjct: 234 ctcccttcgtttctaaatgtttgacaccgttaactttttagcacatgtttgagcgttcgt 175
Query: 63 tttatt 68
|||||
Sbjct: 174 cttatt 169
>RF01058;MIR806;AAAA02030555.1/1290-1052 39946:Oryza sativa Indica
Group
Length = 239
Score = 180 bits (91), Expect = 6e-45
Identities = 147/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 78 ttaagtaattattaattcttttcctatcatttgatttcttgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||| ||||||||| ||||||||||| |||
Sbjct: 138 tacatatagttttacatatttcacaaatttttttaaataagacg-acggtcaaacacgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||||| |||| |||||||||
Sbjct: 197 -taaaaagtcaacggtgtcaaacatttagaaatagagggagta 238
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||| |||| ||||||||||||||| ||||||||||
Sbjct: 236 ctccctctatttctaaatgtttgacaccgttgacttttta 197
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 180 bits (91), Expect = 6e-45
Identities = 145/163 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| |||||||||||||||||| |||||||||| ||| |
Sbjct: 79 ttaagtaattattaattattttcctatcatttgattcattgtgaaatatacttatatgca 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||| ||||||||||| |||||||||||||
Sbjct: 139 tacatatagttttacatatttcacaaaagtttttaaataagacgaatggtcaaacatgtg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 199 ctaaaaagttaacggtgtcaaatatttagaaacggagggagta 241
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| |||||||||| | ||||||||| || ||||||| |||||||
Sbjct: 239 ctccctccgtttctaaatatttgacaccgttaactttttagcacatgtttgaccattcgt 180
Query: 63 tttatt 68
|||||
Sbjct: 179 cttatt 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| ||| |||||| || | |||||| |||||||||||||| ||||
Sbjct: 76 tttttttaataagacaaacagtcaaatatattttaaaaaatcaacggtgtcaaatattta 17
Query: 226 gaaacggagg 235
|||| |||||
Sbjct: 16 gaaatggagg 7
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 180 bits (91), Expect = 6e-45
Identities = 146/163 (89%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattcttttcatatcatttgattcattgttaaatatacttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| |||||||||||||||||| || |||||||||| ||||| |||||||||||||
Sbjct: 138 tgcatatagttttacatatttcac-aaaaattttgaataaaacgaatggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 197 ctaaaaagttgacggtgtcaaatatttagaaacggagggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| |||||||||| ||||||||| || ||||||| |||||||
Sbjct: 237 ctccctccgtttctaaatatttgacaccgtcaactttttagcacatgtttgaccattcgt 178
Query: 63 tttattc 69
|||||||
Sbjct: 177 tttattc 171
Score = 48.1 bits (24), Expect = 6e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||||||| |||||| | |||||||||| || |||||| ||||
Sbjct: 76 ttttttaaataagacgaacggttaaacatatttaaaaaagtcaatggcgtcaaatattta 17
Query: 226 gaaa 229
||||
Sbjct: 16 gaaa 13
>RF01058;MIR806;AC111015.2/40203-40442 39947:Oryza sativa Japonica
Group
Length = 240
Score = 180 bits (91), Expect = 6e-45
Identities = 142/159 (89%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||||||||| || |||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 78 taagtaattattaatgattttcctatcatttgaatcattgttaaatatacttttatgtat 137
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| |||||||| ||||||||| | |||||||||||||||||||| |||||||| | |
Sbjct: 138 acatatagttttatatatttcacaattttttttgaataagacgaacgatcaaacatatac 197
Query: 199 taaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 taaaaagtcaacggtgtcaaacatttagaaacggaggga 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
|||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttagtatatgtttgatcgttcgtc 177
Query: 64 ttattc 69
||||||
Sbjct: 176 ttattc 171
>RF01058;MIR806;AP008211.1/11219819-11220068 39947:Oryza sativa
Japonica Group
Length = 250
Score = 180 bits (91), Expect = 6e-45
Identities = 149/169 (88%), Gaps = 7/169 (4%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 82 ttaagtaattattaattcttttcttatcatttgattcattgttaaatatattttcatgta 141
Query: 138 cacatgtagttttacatatttcactaactttttt-------gaataagacgaacggtcaa 190
||| || ||||||||||||||| || ||||| ||||||||| |||||||||
Sbjct: 142 ggcatataattttacatatttcacaaaagtttttaacttttgaataagacaaacggtcaa 201
Query: 191 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagt 239
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 202 acatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggagt 250
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 80 ttttttgaataagacgaacagtcaaatatgtgctaaaaagtcaacgacgtcaaacattt 22
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||||||||||||||| |||||||||| ||||||||||| || |||||||
Sbjct: 249 ctccctccgtttcaaaatatttgacaccgttgactttttagcacatgtttga 198
>RF01058;MIR806;DQ280666.1/5879-6118 39947:Oryza sativa Japonica
Group
Length = 240
Score = 180 bits (91), Expect = 6e-45
Identities = 145/163 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 77 ttaaataattataaattcttttcctatcatttgattcattgttaaatatacttatatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 137 tacatatagttttacatatttcataaaattttttgaacaagacgaacggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| ||||||||| || ||| |||||||||||||||
Sbjct: 197 ctaaaaagttaacggtgtcgaatattcagaaacggagggagta 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| |||||||||| | |||||| |||||| || || ||||
Sbjct: 76 tttttttaataagacgaatggtcaaacatatttaaaaaagacaacggcgttgaatattta 17
Query: 226 gaaacggagggagta 240
||| |||||||||||
Sbjct: 16 gaagcggagggagta 2
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 180 bits (91), Expect = 6e-45
Identities = 145/163 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| |||||||||||||||||||||| |||||| |||||
Sbjct: 78 ttaagtaattattaattttttttctatcatttgattcattgttaaaaatacttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||| | || |||| |||||||||||||||| |||||||||
Sbjct: 138 tacatatagttttatatatttcgcaaaagttttggaataagacgaacggttaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||| |||||| |||| |||||||||||||||
Sbjct: 198 ctaaaaagtcaacggcgtcaaatatttagaaacggagggagta 240
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||||||||||||||||| | |||||||||||| |||||| |||||
Sbjct: 76 tttttttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||||| ||||
Sbjct: 16 gaaacggaggaagta 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| |||||| ||| ||||||||||| || ||||| | | |||||
Sbjct: 238 ctccctccgtttctaaatatttgacgccgttgactttttagcacatgtttaaccgttcgt 179
Query: 63 tttattcc 70
|||||||
Sbjct: 178 cttattcc 171
>RF01062;MIR812;AAAA02017130.1/7803-7973 39946:Oryza sativa Indica
Group
Length = 171
Score = 178 bits (90), Expect = 2e-44
Identities = 121/130 (93%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttaagtaattattaattatttttctatcatttgattcattgttaaatatactttcatgta 70
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||
Sbjct: 69 tacatatagttttacatatttca-taattttttttaataagacgaacggtcaaacatatg 11
Query: 198 ctaaaaagtc 207
||||||||||
Sbjct: 10 ctaaaaagtc 1
>RF01062;MIR812;AP005480.2/81366-81538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 178 bits (90), Expect = 2e-44
Identities = 120/130 (92%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 130 ttaagtaattatttattcttttcatctcatttgattcattgttaaataacctttcatgta 71
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||||||||||||| | |||||| ||||||||||| |||||||||||||
Sbjct: 70 cacatatagttttacatatttcacaattttttttaaataagacgaatggtcaaacatgtg 11
Query: 198 ctaaaaagtc 207
||||||||||
Sbjct: 10 ctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 132 ttttttgaataagacgaatggttaaacacgtgctaaaaagtc 173
>RF01062;MIR812;AAAA02000693.1/35465-35637 39946:Oryza sativa Indica
Group
Length = 173
Score = 178 bits (90), Expect = 2e-44
Identities = 120/130 (92%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130 ttaagtaattatttattccttttatatcatctgattcattgttaaatatactttcatgta 71
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||| ||||||||| || |||||| ||||| ||||| ||||||||| |||
Sbjct: 70 cacatatagttttatatatttcacaaattttttttaataaaacgaatggtcaaacacgtg 11
Query: 198 ctaaaaagtc 207
||||||||||
Sbjct: 10 ctaaaaagtc 1
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
||||||||||||||| || |||||||||||||||||||||||
Sbjct: 132 ttttttgaataagacaaatggtcaaacatgtgctaaaaagtc 173
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 34 gactttttagtacgtgtttgatcattcgttttatt 68
|||||||||| |||||||||| |||||||||||||
Sbjct: 1 gactttttagcacgtgtttgaccattcgttttatt 35
>RF01058;MIR806;AAAA02035035.1/12905-13144 39946:Oryza sativa Indica
Group
Length = 240
Score = 178 bits (90), Expect = 2e-44
Identities = 204/239 (85%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| ||||||||| ||||| |||| |||||||||||||||| ||| | |||||||
Sbjct: 4 ctccctccatttcaaaatatttgataccgttgactttttagtacgttttttaccattcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| |||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 64 cttatta-aaaaaatttaagtaattatttattcttttcatatcatttgatttattgttaa 122
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| || ||||| |||||| | ||| |||||| ||||||||||
Sbjct: 123 atatactttcatgtacacatataattttatatatttta-taa-tttttttaataagacga 180
Query: 183 acggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| | ||| || | | |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 181 acgattaaatatatacttaaaaagttaacggtgtcaaatattttaaaacggagggagta 239
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||| ||| ||| | || |||||||||||||||| ||||| |||||
Sbjct: 76 tttttttaataagacgaatggtaaaaaacgtactaaaaagtcaacggtatcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||| ||||||||||
Sbjct: 16 gaaatggagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||||||| ||||| |||||||||| | ||||||||
Sbjct: 237 ctccctccgttttaaaatatttgacaccgttaacttttta 198
>RF01058;MIR806;AP008207.1/31190054-31189814 39947:Oryza sativa
Japonica Group
Length = 241
Score = 178 bits (90), Expect = 2e-44
Identities = 191/225 (84%), Gaps = 4/225 (1%)
Strand = Plus / Plus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattccn 71
||||||||||||| |||||| ||||||||||||| |||||| | ||||| | ||||||
Sbjct: 12 tttcaaaatgtttaacaccgttgactttttagtatgtgtttaaccattcatcttattcaa 71
Query: 72 nnnnnnttaagtaattatttattctttttatatcatttgattcattgttaaatatacttt 131
||||||||||||||||| ||||||||||||||||||| | ||||||||||||||
Sbjct: 72 aaaaatttaagtaattatttattttttttatatcatttgattcgtcgttaaatatacttt 131
Query: 132 catgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaa 191
||||||||||| ||||||||| ||||||| || | || |||||||||||||||||||
Sbjct: 132 catgtacacatatagttttacttatttca--aaaataattaaataagacgaacggtcaaa 189
Query: 192 catgtgct--aaaaagtcaacggtgtcaaacattttgaaacggag 234
|||| | ||||| |||||||||||||||||||| ||||||||
Sbjct: 190 tatgtaattaaaaaaatcaacggtgtcaaacattttaaaacggag 234
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| ||| ||||| | |||||||||||||||||| |||||||||
Sbjct: 75 ttttttgaataagatgaatggttaaacacatactaaaaagtcaacggtgttaaacatttt 16
Query: 226 gaaa 229
||||
Sbjct: 15 gaaa 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgacttttt 41
|||||||| |||||||||||||||| ||| |||||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttgatttttt 200
>RF01058;MIR806;AACV01022238.1/466-223 39947:Oryza sativa Japonica
Group
Length = 244
Score = 178 bits (90), Expect = 2e-44
Identities = 148/167 (88%), Gaps = 4/167 (2%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||
Sbjct: 77 ttaagtaattattaattctttttctatcatttgattctttgttaaatatactttcatata 136
Query: 138 ca----catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaaca 193
| ||| |||||||| ||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 137 tatatacatatagttttatatatttcacaaaattttttggataagacgaacggtcaaaca 196
Query: 194 tgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 197 tgtgctaaaatgttaacggtgtcaaccatttagaaacagagggagta 243
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 178 bits (90), Expect = 2e-44
Identities = 147/165 (89%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct: 72 ttaagtaattattaattattgtcttatcatttgattcattgttaaatatacttacatgta 131
Query: 138 cacatgtagttttacatatttcactaa--cttttttgaataagacgaacggtcaaacatg 195
|||| ||||||||||||||||| || ||||||||||||||| |||||| || ||||
Sbjct: 132 tacatatagttttacatatttcataaaagtttttttgaataagacaaacggttaagcatg 191
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 192 tgctaaaaagtcaacggtgtcaaatatttagaaacggagggagta 236
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||||||||| |||| |||||||||| |||||||||||
Sbjct: 234 ctccctccgtttctaaatatttgacaccgttgactttttag 194
>RF01058;MIR806;BX664712.3/32416-32656 4530:Oryza sativa (rice)
Length = 241
Score = 178 bits (90), Expect = 2e-44
Identities = 123/134 (91%)
Strand = Plus / Plus
Query: 86 ttatttattctttttatatcatttgattcattgttaaatatactttcatgtacacatgta 145
||||| ||| |||| ||||||||||||||||||||||||||||||| ||||| | || ||
Sbjct: 86 ttattaatttttttcatatcatttgattcattgttaaatatacttttatgtatatatata 145
Query: 146 gttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaag 205
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gttttacatatttcacaaaattttttgaataagacgaacggtcaaacatgtgctaaaaag 205
Query: 206 tcaacggtgtcaaa 219
||||| | ||||||
Sbjct: 206 tcaacagcgtcaaa 219
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||| || | ||||||||||| |||||||||||||||||||||||| |
Sbjct: 76 ttttttaaataaaacaagcggtcaaacatatgctaaaaagtcaacggtgtcaaataaaac 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01062;MIR812;AACV01009588.1/14109-13940 39947:Oryza sativa
Japonica Group
Length = 170
Score = 176 bits (89), Expect = 9e-44
Identities = 120/129 (93%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 128 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcacgta 69
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||||| |||||||| ||||||||| || || ||| ||||||||||| |||||||||||||
Sbjct: 68 cacatatagttttatatatttcac-aaattgttttaataagacgaatggtcaaacatgtg 10
Query: 198 ctaaaaagt 206
|||||||||
Sbjct: 9 ctaaaaagt 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaaca 193
|||||||||||||||||| |||||||||
Sbjct: 130 ttttttgaataagacgaatggtcaaaca 157
>RF01062;MIR812;AP005756.3/134331-134500 39947:Oryza sativa Japonica
Group
Length = 170
Score = 176 bits (89), Expect = 9e-44
Identities = 120/129 (93%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 128 ttaagtaattatttattcttttcatatcatttgattcatcgttaaatatactttcatgta 69
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||| || || |||||| |||||||||||||||||||||| ||
Sbjct: 68 tacatatagttttacatatttaac-aattttttttaataagacgaacggtcaaacatatg 10
Query: 198 ctaaaaagt 206
|||||||||
Sbjct: 9 ctaaaaagt 1
>RF01062;MIR812;AP005658.3/58267-58095 39947:Oryza sativa Japonica
Group
Length = 173
Score = 176 bits (89), Expect = 9e-44
Identities = 152/174 (87%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||
Sbjct: 173 gactttttagtacgtgtttgaccattcgtcttattc-aaaaaatttaagtatttatttat 115
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
|||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 114 tcttttcatatcatttgattcattgttaaatatatttttatgtacacatatagttttaca 55
Query: 154 tatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
||||||| || ||| |||||||| |||||||||||||||||| || |||||||
Sbjct: 54 tatttcataaattttattgaataaaacgaacggtcaaacatgtacttaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 132 ttttttgaataagacgaatggtcaaacacgtactaaaaagtc 173
>RF01058;MIR806;AAAA02025783.1/3210-3453 39946:Oryza sativa Indica
Group
Length = 244
Score = 176 bits (89), Expect = 9e-44
Identities = 192/225 (85%), Gaps = 4/225 (1%)
Strand = Plus / Plus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgacttttt--agtacgtgtttgatcattcg 61
||||||||||| ||||| |||||||||| | ||||||| ||||||||||||| ||||
Sbjct: 5 tccctccgttttaaaatatttgacaccgttaacttttttaagtacgtgtttgaccattta 64
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
| |||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 65 tcttattc-aaaaaatttaagtaattatttattcttttcatatcatttgattcattgtta 123
Query: 122 aatatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacg 181
|||||| |||||||||||||| | |||||| ||||||||| || |||||| ||||| ||
Sbjct: 124 aatatattttcatgtacacatatggttttatatatttcacaaaattttttaaataaaaca 183
Query: 182 aacggtcaaacatgtgc-taaaaagtcaacggtgtcaaacatttt 225
||||||||||||||||| || | | ||||||||||| ||||||||
Sbjct: 184 aacggtcaaacatgtgcttagataatcaacggtgtcgaacatttt 228
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct--aaaaagtcaacggtgtcaaacatt 223
|||||||||||||| || ||||||||| || || ||||||| |||||||||||| |||
Sbjct: 78 ttttttgaataagataaatggtcaaacacgtacttaaaaaagttaacggtgtcaaatatt 19
Query: 224 ttgaaacggaggga 237
|| |||||||||||
Sbjct: 18 ttaaaacggaggga 5
>RF01058;MIR806;AP008211.1/4813545-4813786 39947:Oryza sativa
Japonica Group
Length = 242
Score = 176 bits (89), Expect = 9e-44
Identities = 147/164 (89%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||
Sbjct: 80 ttaagtaattattttttcttttcatatcatttgattcatcgttaaatatactttcatata 139
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| || |||||||||||||||||| | |||||| ||||||||||| |||||||||| ||
Sbjct: 140 tatatatagttttacatatttcac--attttttttaataagacgaatggtcaaacatatg 197
Query: 198 ctaaaa-agtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| | ||||||||||||||||||| ||||||| |||||||
Sbjct: 198 ctaaaataatcaacggtgtcaaacatttcgaaacggtgggagta 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 199 taaaaagtcaacggtgtcaaacattttgaaac 230
|||||| |||| ||||||||||||||||||||
Sbjct: 43 taaaaaatcaatggtgtcaaacattttgaaac 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgact-ttttagtacgtgtttgatcattcg 61
||||| ||||||| ||||||||||||||| ||| | |||||| | ||||||| ||||||
Sbjct: 239 ctcccaccgtttcgaaatgtttgacaccgttgattattttagcatatgtttgaccattcg 180
Query: 62 ttttatt 68
| |||||
Sbjct: 179 tcttatt 173
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 176 bits (89), Expect = 9e-44
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 79 taagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtac 138
|||||| ||||| ||||| ||| |||||||||||||||||||||||||||||| |||||
Sbjct: 69 taagtagttattaattctatttctatcatttgattcattgttaaatatacttttatgtat 128
Query: 139 acatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgc 198
|||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||
Sbjct: 129 acatatagttttacatatttcacaaaattttttgaataagacgaatggtcaaacatgttt 188
Query: 199 taaaaagtcaacggtgtcaaacatt 223
||||||||||||| ||||||||||
Sbjct: 189 gaaaaagtcaacggcgtcaaacatt 213
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
|||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 66 ttttttaaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 8
>RF01058;MIR806;AP005604.3/116542-116319 39947:Oryza sativa Japonica
Group
Length = 224
Score = 176 bits (89), Expect = 9e-44
Identities = 122/132 (92%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 101 atatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttca 160
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 86 atatcatttgattcattgttaaatatactttcatgtacacatatagttttacacatttca 145
Query: 161 ctaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaac 220
| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 146 --tattttttttaataaggtgaacggtcaaacacgtgctaaaaagtcaacggtgtcaaac 203
Query: 221 attttgaaacgg 232
||||||||||||
Sbjct: 204 attttgaaacgg 215
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||
Sbjct: 76 ttttttgaataagacgaattgtcaaacacatactaaaaagtcaacggtgtcaaatatttt 17
Query: 226 gaaacggagggagta 240
||||| |||||||||
Sbjct: 16 gaaacagagggagta 2
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||| |||||||||| |||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 4 ctccctctgtttcaaaatatttgacaccgttgactttttagtatgtgtttgacaattcgt 63
Query: 63 tttattc 69
||||||
Sbjct: 64 cttattc 70
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 9 ccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 215 ccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttga 170
>RF01058;MIR806;AC136787.4/71986-72222 39947:Oryza sativa Japonica
Group
Length = 237
Score = 176 bits (89), Expect = 9e-44
Identities = 146/161 (90%), Gaps = 3/161 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttaagtgattattaattattttcttatcatttgattcattgttaaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| || |||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||
Sbjct: 138 tatatatagttttacatatttcac-aactttttt-aataagacgaatggtcaaatatgta 195
Query: 198 c-taaaaagtcaacggtgtcaaacattttgaaacggaggga 237
| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 196 cgtaaaaagtcaacggtgtcaaacatttagaaacggaggga 236
Score = 67.9 bits (34), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcgt 62
|||||||||||| ||||||||||||||| |||||||||| |||| | ||||| |||||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttacgtacatatttgaccattcgt 177
Query: 63 tttatt 68
|||||
Sbjct: 176 cttatt 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||| | |||||||||| ||||||||||||| |||||| ||||
Sbjct: 76 ttttttcaataagatgaatgatcaaacatgtttaaaaaagtcaacggcgtcaaatattta 17
Query: 226 gaaacggaggg 236
|||||||||||
Sbjct: 16 gaaacggaggg 6
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 176 bits (89), Expect = 9e-44
Identities = 147/164 (89%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||| |||||| |||||||| |||||||||||||||| | |||||||||||||| ||
Sbjct: 78 ttaagtcattattaattcttttcgtatcatttgattcattataaaatatactttcatata 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaaca-tgt 196
||||| |||||||||||||||| || |||||| ||||||||||||||| ||||| |||
Sbjct: 138 cacataaagttttacatatttca--aaatttttttaataagacgaacggttaaacattgt 195
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 196 actaaaaagttaacggtgtcaaacattttgaaacggagggagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtac 46
||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 237 ctccctccgtttcaaaatgtttgacaccgttaactttttagtac 194
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| |||| ||||| |||| ||||||||||||| |||||| ||||
Sbjct: 76 ttttttaaataagacaaacgatcaaatatgtttaaaaaagtcaacggcgtcaaatattta 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
>RF01058;MIR806;AAAA02023204.1/1421-1661 39946:Oryza sativa Indica
Group
Length = 241
Score = 174 bits (88), Expect = 4e-43
Identities = 142/160 (88%)
Strand = Plus / Plus
Query: 81 agtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacac 140
|||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 81 agtaattattaattcttttactatcatttgattcattgttaaatgtacttatatgtacaa 140
Query: 141 atgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgcta 200
| |||||||||||||||||| || |||||||||||| ||||| ||||||||||||||||
Sbjct: 141 gtatagttttacatatttcacgaaattttttgaataaaacgaatggtcaaacatgtgcta 200
Query: 201 aaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| ||||| | || ||||||||| |||||
Sbjct: 201 aaaagtcaacggtatcaaatacttagaaacggagagagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtttta 66
||||||||| || | ||||| |||| ||||||||||| || ||||||| |||||||||||
Sbjct: 234 ctccgtttctaagtatttgataccgttgactttttagcacatgtttgaccattcgtttta 175
Query: 67 ttc 69
|||
Sbjct: 174 ttc 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||||| |||||||| | |||| |||||||| | ||| ||||
Sbjct: 76 ttttttgaataagatgaacgatcaaacatatttaaaaaggtcaacggcgctaaatattta 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 taaacggagggagta 2
>RF01058;MIR806;AP003432.2/54591-54357 39947:Oryza sativa Japonica
Group
Length = 235
Score = 174 bits (88), Expect = 4e-43
Identities = 140/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 75 ttaagtaattatttatttttttcatatcatttaatttattgttaaatatactttcatgta 134
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||| ||||||||||| || || |||||| |||||||||||| || |||||||||
Sbjct: 135 tacatatagatttacatattttac-aaatttttttaataagacgaacagttaaacatgtg 193
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacgga 233
|| |||||| |||||||||||||||||| |||||||
Sbjct: 194 ctgaaaagttaacggtgtcaaacattttaaaacgga 229
>RF01058;MIR806;ABRL01001931.1/4966-5201 65489:Oryza barthii
Length = 236
Score = 174 bits (88), Expect = 4e-43
Identities = 201/238 (84%), Gaps = 6/238 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| || ||||||||||||| | | || || || ||||||||||||||||
Sbjct: 4 ctccctccgttttaatatgtttgacaccgttaatttcttttta-gtgtttgatcattcgt 62
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||| || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 cttattc-aaaatatttaattatttatttatttttttcatatcatttgattcattgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
|||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||
Sbjct: 122 atatactttcatgtacacatatagttttacatatttcacaaaaaaatttaaataagacga 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| ||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 182 atggt----catatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 235
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 233 ctccctccgttttaaaatatttgacaccgttgactttttag 193
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 208 aacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||| || ||||||||||||||
Sbjct: 34 aacggtgtcaaacatattaaaacggagggagta 2
>RF01058;MIR806;AC137620.2/65289-65525 39947:Oryza sativa Japonica
Group
Length = 237
Score = 174 bits (88), Expect = 4e-43
Identities = 133/148 (89%)
Strand = Plus / Plus
Query: 86 ttatttattctttttatatcatttgattcattgttaaatatactttcatgtacacatgta 145
||||| |||||||| |||||||||||||||||||||||||| ||| ||||| ||| ||
Sbjct: 82 ttattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatata 141
Query: 146 gttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaaaag 205
||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 attttacatatttcacgaaagtttttgaataagacgaacggttaaacatgtgctaaaaag 201
Query: 206 tcaacggtgtcaaacattttgaaacgga 233
|||||||||| ||| |||||||||||||
Sbjct: 202 tcaacggtgttaaatattttgaaacgga 229
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgt 196
|||||| ||||||||||||||||||||||||
Sbjct: 72 ttttttaaataagacgaacggtcaaacatgt 42
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
||||||||||||| ||| |||||| ||||||||||| || ||||| | | ||||| ||||
Sbjct: 229 tccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccgttcgtcttat 170
Query: 68 tc 69
||
Sbjct: 169 tc 168
>RF01058;MIR806;AACV01019673.1/9923-9682 39947:Oryza sativa Japonica
Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 146/164 (89%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttg-attcattgttaaatatactttcatgt 136
||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttttattcattgttaaatatacttttatgt 137
Query: 137 acacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgt 196
| |||| ||||| |||||||||||| || |||||| |||| ||||||||||||||||||
Sbjct: 138 atacatatagttatacatatttcacaaaagtttttgtataaaacgaacggtcaaacatgt 197
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||| |||||| ||||| |||||||||| |||| ||||||||||
Sbjct: 198 gctacaaagtctacggtatcaaacatttagaaatggagggagta 241
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacat 194
||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagacgaacggtcaaacat 48
>RF01058;MIR806;AACV01022117.1/107-349 39947:Oryza sativa Japonica
Group
Length = 243
Score = 174 bits (88), Expect = 4e-43
Identities = 142/160 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 80 ttaagtaatcattagttcttttcctatcatttgattcattgttaaatatacttttatgta 139
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||||||||| |||||||||||||||| ||
Sbjct: 140 tacatatagttttacatatttcacaaaagtttttgaataaaacgaacggtcaaacatctg 199
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||| || || ||| |||| ||||||||||||
Sbjct: 200 ctaaaaagtcaatggcgttaaatatttagaaacggaggga 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||||||| ||| |||||| | | ||||||||||| | |||||| ||||
Sbjct: 77 tttttttaataagacgaatggttaaacatatttttaaaaagtcaacagcgtcaaatattt 18
Query: 225 tgaaacggagggagta 240
|||||| ||||||||
Sbjct: 17 agaaacgcagggagta 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 4 tccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgtt 63
|||||||||||| |||| ||| || || ||||||||||| | ||||||| | ||||||
Sbjct: 239 tccctccgtttctaaatatttaacgccattgactttttagcagatgtttgaccgttcgtt 180
Query: 64 ttattc 69
||||||
Sbjct: 179 ttattc 174
>RF01058;MIR806;AACV01025108.1/1606-1848 39947:Oryza sativa Japonica
Group
Length = 243
Score = 174 bits (88), Expect = 4e-43
Identities = 206/241 (85%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||| ||||| |||| ||||||||| | | ||||| || |||| ||
Sbjct: 4 ctccctccgtttcaaaatatttgaaaccgttgactttttggcaggtgttggaccattggt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
| |||| |||||||||||||||||||||| |||||||| |||||||||| ||
Sbjct: 64 ctaattc-aaaaaatttaagtaattatttattcttttcatatcattggattcattgt-aa 121
Query: 123 atatacttt-catgtacac-atgtagttttacatatttcactaacttttttgaataagac 180
||||||||| ||||||||| || ||| |||||||||||||| || |||||| ||||||||
Sbjct: 122 atatacttttcatgtacaccatataggtttacatatttcaccaaattttttaaataagac 181
Query: 181 gaacggtcaaa-catgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagt 239
||| ||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 182 gaatggtgaaaacacgtgctaaaaaggaaacggtgtcaaacattttgaaacggagggagt 241
Query: 240 a 240
|
Sbjct: 242 a 242
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||| |||| || |||| |||| ||| |||||||||||||| ||||| |||||
Sbjct: 76 ttttttgaattagaccaatggtccaacacctgccaaaaagtcaacggtttcaaatatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
||||||||||||||||||||||||||||| | |||||||| ||||||||
Sbjct: 240 ctccctccgtttcaaaatgtttgacaccgtttcctttttagcacgtgttt 191
>RF01058;MIR806;AP008218.1/24274484-24274243 39947:Oryza sativa
Japonica Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 139/156 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 79 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatacttatatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||||| || |||| |||||||| ||| |||||||||||||
Sbjct: 139 tacatatagttttagatatttcacaaaagttttcgaataagaggaatggtcaaacatgtg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacgga 233
|||||||||||||||| ||||| |||| ||||||||
Sbjct: 199 ctaaaaagtcaacggtatcaaatatttagaaacgga 234
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
|||||||| |||| ||||| |||| ||||||||||| || ||||||| ||||| | ||||
Sbjct: 234 tccgtttctaaatatttgataccgttgactttttagcacatgtttgaccattcctcttat 175
Query: 68 tc 69
||
Sbjct: 174 tc 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaaca 193
|||||||||||| |||||||||||||||
Sbjct: 77 ttttttgaataatacgaacggtcaaaca 50
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa Indica
Group
Length = 240
Score = 172 bits (87), Expect = 1e-42
Identities = 126/139 (90%)
Strand = Plus / Plus
Query: 102 tatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcac 161
|||| ||||||||||||||||||||||||||| ||| || | ||||||||||||||| |
Sbjct: 101 tatcgtttgattcattgttaaatatactttcacgtatacttatagttttacatattttat 160
Query: 162 taacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 221
|| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 161 aaaagtttttgaataagacgaacgttcaaatatgtgctaaaaagtcaacggtgtcaaaca 220
Query: 222 ttttgaaacggagggagta 240
|||||||| ||||||||||
Sbjct: 221 ttttgaaatggagggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| |||||||||||||||||||| ||||||||||| || | ||||| | |||||
Sbjct: 237 ctccctccatttcaaaatgtttgacaccgttgactttttagcacatatttgaacgttcgt 178
Query: 63 tttattc 69
||||||
Sbjct: 177 cttattc 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| || |||||||||| | |||| |||||| | |||||| ||||
Sbjct: 76 tttttttaataagacaaatggtcaaacatatttaaaaaggtcaacagcgtcaaatattta 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 172 bits (87), Expect = 1e-42
Identities = 141/159 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| |||||||||||||||| |||||||||||| |||||
Sbjct: 78 ttaagtaattattaattattttcctatcatttgattcattattaaatatacttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 138 tacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggg 236
|||||| ||||||||| | ||| |||| |||||||||||
Sbjct: 198 ctaaaatgtcaacggtattaaatatttagaaacggaggg 236
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| |||||||||||||||||||||| | |||||||||||||| |||||| |||| |
Sbjct: 75 tttttaaataagacgaacggtcaaacatattttaaaaagtcaacggcgtcaaatatttag 16
Query: 227 aaa 229
|||
Sbjct: 15 aaa 13
>RF01058;MIR806;AL713932.4/119735-119496 4530:Oryza sativa (rice)
Length = 240
Score = 172 bits (87), Expect = 1e-42
Identities = 126/140 (90%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||
Sbjct: 4 ctccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccgttcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 64 cttattc-aaaaaatttaagtaattattttttcttttcatatcatttgattcattgttaa 122
Query: 123 atatactttcatgtacacat 142
||||||||||||||||||||
Sbjct: 123 atatactttcatgtacacat 142
Score = 133 bits (67), Expect = 1e-30
Identities = 73/75 (97%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 76 ttttttgaataagacgaacggtcaaacacgtactaaaaagtcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AAAA02031464.1/18598-18832 39946:Oryza sativa Indica
Group
Length = 235
Score = 172 bits (87), Expect = 1e-42
Identities = 144/163 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| || ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 72 ttaagtaattattaattattcttatatcatttgattcattgttaaatatatttttatgta 131
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||| |||| ||| || |||||||||||||||||| |||||| |||||
Sbjct: 132 ggcatataattttatatatctcataaaagtttttgaataagacgaacagtcaaaaatgtg 191
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 192 ctaaaaagtcaacggtgtcaaacatttcgaaatggagggagta 234
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||||||| |||| ||||||||||||||| |||||||||||
Sbjct: 232 ctccctccatttcgaaatgtttgacaccgttgactttttag 192
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacg 211
|||||| ||||||||||||| | |||||| || |||||||||||||
Sbjct: 70 ttttttaaataagacgaacgataaaacatttgataaaaagtcaacg 25
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa Indica
Group
Length = 238
Score = 172 bits (87), Expect = 1e-42
Identities = 145/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 76 ttaaataattattaattcctttcctatcatttgattcattgttaaatatattttcatgta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||||||||||||||| |||||||| ||||
Sbjct: 136 tacatatagttttacatatttcac-aaaatttttgaataagacgaatggtcaaacttgtg 194
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||| |||||| |||| |||||| || |||||
Sbjct: 195 ctaaaaagtcaacggggtcaaatatttagaaacgaagcgagta 237
Score = 48.1 bits (24), Expect = 6e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 10 cgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||| |||| |||||| ||| ||||||||||| || |||||| ||||||| ||||||
Sbjct: 228 cgtttctaaatatttgaccccgttgactttttagcacaagtttgaccattcgtcttattc 169
>RF01058;MIR806;AAAA02013988.1/6415-6174 39946:Oryza sativa Indica
Group
Length = 242
Score = 172 bits (87), Expect = 1e-42
Identities = 141/159 (88%)
Strand = Plus / Plus
Query: 82 gtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacaca 141
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| | |
Sbjct: 83 gtaattattaattcttttcctatcatttgattcattgttaaatatatttatatgtatata 142
Query: 142 tgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaa 201
| |||||||||||||||||| || |||| ||||||||||||||||||||||| |||| |
Sbjct: 143 tatagttttacatatttcacaaaaattttcgaataagacgaacggtcaaacatatgctta 202
Query: 202 aaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| ||||||| |||| |||||||||||||||
Sbjct: 203 aaagtcaacgatgtcaaatatttggaaacggagggagta 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| ||||||| || |||||||| || | ||||||| | |||||
Sbjct: 239 ctccctccgtttccaaatatttgacatcgttgacttttaagcatatgtttgaccgttcgt 180
Query: 63 tttattc 69
||||||
Sbjct: 179 cttattc 173
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 172 bits (87), Expect = 1e-42
Identities = 202/238 (84%), Gaps = 7/238 (2%)
Strand = Plus / Plus
Query: 5 ccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttt 64
||||||||||| |||| |||||| | | ||||||||| || ||||||||||||||| |
Sbjct: 6 ccctccgtttctaaatatttgacgctgttgacttttttaaacatgtttgatcattcgtct 65
Query: 65 tattccnnnnnnnttaagtaattatt-tattctttttatatcatttgattcattgttaaa 123
|||| ||||||||||||| |||| |||| ||||||||||||||||||||||
Sbjct: 66 tatt---aaaaaattaagtaattattatatttttttcctatcatttgattcattgttaaa 122
Query: 124 tatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaa 183
|||| ||||||||| |||| ||||||||||||| ||| || ||||| |||||||||||
Sbjct: 123 tatattttcatgtatacatatagttttacatatatca--aaaatttttaaataagacgaa 180
Query: 184 cggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 181 aggtcaaacatgtgcttaaaaagtcaacggtgtcaaatatttagaaacggagggagta 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| ||||||||||| | |||||||||| ||||||||||| | |||||| |||| |
Sbjct: 75 ttttttaataagacgaatgatcaaacatgtttaaaaaagtcaacagcgtcaaatatttag 16
Query: 227 aaacggaggg 236
||||||||||
Sbjct: 15 aaacggaggg 6
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
||||||||||||| |||| |||||||||| ||||||||||
Sbjct: 236 ctccctccgtttctaaatatttgacaccgttgacttttta 197
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 172 bits (87), Expect = 1e-42
Identities = 144/163 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| ||||||||||||||| |||||||||| || |||||
Sbjct: 78 ttaagtaattattaattattttcctatcatttgattcatggttaaatatatttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||||| || |||||| | |||||| ||| ||||||||||||
Sbjct: 138 tacatatagttttacatatttcataaattttttttagtaagacaaacagtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 198 ctaaaaagtcaacggtgtcaaatatttggaaacggagggagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||| |||| |||||||||| ||||||||||| || |||||||
Sbjct: 238 ctccctccgtttccaaatatttgacaccgttgactttttagcacatgtttga 187
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaa-agtcaacggtgtcaaacattt 224
|||||| ||||||||||||||||||| || | ||||| ||||||| |||| ||| ||||
Sbjct: 77 tttttttaataagacgaacggtcaaatatattttaaaagagtcaactgtgttaaatattt 18
Query: 225 tgaaacggag 234
|||||||||
Sbjct: 17 agaaacggag 8
>RF01058;MIR806;AP008214.1/2109258-2109019 39947:Oryza sativa
Japonica Group
Length = 240
Score = 170 bits (86), Expect = 6e-42
Identities = 147/165 (89%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 76 ttaaataattattaattcttttcctatcatttgattcattgttaaatatactttcattta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| |||||||| ||| |||||| ||||||||||||||| ||||||||
Sbjct: 136 tacatatagttttatatatttca-taatttttttaaataagacgaacggttaaacatgta 194
Query: 198 ct--aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| ||||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 195 cttaaaaaaatcaacggtgtcaaacgtttagaaacggagggagta 239
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| |||||||||||| | |||||| || ||||| ||| ||||
Sbjct: 75 ttttttgaataagacgaatggtcaaacatgt-tttaaaagttaatggtgttaaatattta 17
Query: 226 gaaacgga 233
||||||||
Sbjct: 16 gaaacgga 9
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttt 41
||||||||||||| ||| ||||||||||| ||| |||||
Sbjct: 237 ctccctccgtttctaaacgtttgacaccgttgatttttt 199
>RF01058;MIR806;AC116601.1/158497-158738 39947:Oryza sativa Japonica
Group
Length = 242
Score = 168 bits (85), Expect = 2e-41
Identities = 142/161 (88%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| ||||||| |||||||| ||| |||||||||||||| | ||||| |
Sbjct: 81 aagtaattattaattctttccctatcattttatttgttgttaaatatactattatgtata 140
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| ||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 141 catatagttttacatattttacaaaagtttttgaataagacgaacggtcaaacatgtgct 200
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 201 aaaaagtcaacgctgtcaaatgtttagaaacggagggagta 241
Score = 54.0 bits (27), Expect = 9e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| ||| ||||||| || ||||||||||| || ||||||| | |||||
Sbjct: 239 ctccctccgtttctaaacatttgacagcgttgactttttagcacatgtttgaccgttcgt 180
Query: 63 tttattc 69
||||||
Sbjct: 179 cttattc 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacat-gtgctaaaaagtcaacggtgtcaaacattt 224
|||||||||||| ||||||||||||| || | ||||| ||||||| ||||| ||||
Sbjct: 77 ttttttgaataaaacgaacggtcaaatatatttaaaaaaaatcaacggagtcaactattt 18
Query: 225 tgaaacggagggagta 240
|||||||||||||||
Sbjct: 17 agaaacggagggagta 2
>RF01058;MIR806;AACV01024998.1/37983-37736 39947:Oryza sativa
Japonica Group
Length = 248
Score = 168 bits (85), Expect = 2e-41
Identities = 142/161 (88%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| | | |||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 87 aagtaattattaaattttttcctatcatttgattcattgttaaatatacttacatgtata 146
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| |||||||||||||||||| || ||||||||||||||||||| |||||||||||||
Sbjct: 147 catatagttttacatatttcacaaaagtttttgaataagacgaacgatcaaacatgtgct 206
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| ||||| ||| ||| |||| |||| ||||||||||
Sbjct: 207 aaaaaaccaacgatgttaaatatttagaaatggagggagta 247
>RF01062;MIR812;AACV01009485.1/6761-6934 39947:Oryza sativa Japonica
Group
Length = 174
Score = 167 bits (84), Expect = 9e-41
Identities = 151/173 (87%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 34 gactttttagtacgtgtttgatcattcgttttattccnnnnnnnttaagtaattatttat 93
||||||||||||| || |||| ||||||| |||||| | ||| ||||||||||
Sbjct: 174 gactttttagtacatgcttgaccattcgtcttattcaaaaaaattaaagcaattatttat 115
Query: 94 tctttttatatcatttgattcattgttaaatatactttcatgtacacatgtagttttaca 153
|||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||
Sbjct: 114 tcttttcatatcatttgattcattattaaatatactttcatgtacacatatagctttaca 55
Query: 154 tatttcactaa-cttttttgaataagacgaacggtcaaacatgtgctaaaaag 205
||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 -atttcacaaattttttttgaataagacgaacggtcaaacatgtgctaaaaag 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
|||||||||||||||||| |||||| ||||| ||||||||||
Sbjct: 133 ttttttgaataagacgaatggtcaagcatgtactaaaaagtc 174
>RF01062;MIR812;AAAA02019701.1/16876-17044 39946:Oryza sativa Indica
Group
Length = 169
Score = 167 bits (84), Expect = 9e-41
Identities = 119/130 (91%), Gaps = 3/130 (2%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 127 ttaagtaattattaattatttttctatcatttgattcattgttaaatatacttttatgta 68
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| || ||||||||||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 67 catatatagttttacatattt---taaatttttttaataagacgaacggtcaaacatgtg 11
Query: 198 ctaaaaagtc 207
||||||||||
Sbjct: 10 ctaaaaagtc 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 207
||||| ||||||||||| ||||||||| || ||||||||||
Sbjct: 129 ttttttaataagacgaatggtcaaacacgtcctaaaaagtc 169
>RF01058;MIR806;AACV01010936.1/13716-13952 39947:Oryza sativa
Japonica Group
Length = 237
Score = 167 bits (84), Expect = 9e-41
Identities = 145/163 (88%), Gaps = 3/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 73 ttaagtaattattaattctttttctatcatttgattcattgttaaatatacttgtatgca 132
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaaca--tg 195
|||| ||||||||||||||||| ||| | |||| |||||| || || ||||||| ||
Sbjct: 133 tacatatagttttacatatttca-taaatatttttaataagttgatcgatcaaacatgtg 191
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagggag 238
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 192 tgctaaaaagtcaacggtgtcaaacatttagaaacggagggag 234
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 234 ctccctccgtttctaaatgtttgacaccgttgactttttag 194
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||| ||| ||| ||||||||||| |||||||||||||||
Sbjct: 42 aaaaaatcaccggcgtcaaacatttagaaacggagggagta 2
>RF01058;MIR806;AAAA02017468.1/3478-3717 39946:Oryza sativa Indica
Group
Length = 240
Score = 167 bits (84), Expect = 9e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 77 ttaaataattattaattcttttccaatcatttgattcattgttaaatatacttatatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||| |||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 137 tacatatagttctacatatttcacaaaagtatttgaataagacgaacggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacgga 233
||||||||||||||| ||| || |||| ||||||||
Sbjct: 197 ctaaaaagtcaacggcgtcgaatatttagaaacgga 232
Score = 44.1 bits (22), Expect = 9e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
|||||||| |||| || ||| ||| ||||||||||| || ||||||| | ||||| ||||
Sbjct: 232 tccgtttctaaatattcgacgccgttgactttttagcacatgtttgaccgttcgtcttat 173
Query: 68 tc 69
||
Sbjct: 172 tc 171
>RF01058;MIR806;AAAA02005830.1/14101-14346 39946:Oryza sativa Indica
Group
Length = 246
Score = 167 bits (84), Expect = 9e-41
Identities = 135/151 (89%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 79 ttaagtaattattaattcttttcatatcatttgattcatggttaaatatactttcatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||| |||||||| || |||||| |||||| |||||||||||||| |
Sbjct: 139 tacgtatagttttatatatttcataaattttttt--ataagatgaacggtcaaacatata 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaa 228
|||||||||||||||||| ||||||||||||
Sbjct: 197 ctaaaaagtcaacggtgttaaacattttgaa 227
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 13 ttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||||||||| |||||| ||||||||||||| |||||||
Sbjct: 227 ttcaaaatgtttaacaccgttgactttttagtatatgtttga 186
>RF01058;MIR806;AP008211.1/28894889-28894644 39947:Oryza sativa
Japonica Group
Length = 246
Score = 167 bits (84), Expect = 9e-41
Identities = 145/164 (88%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||| ||| | |||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 82 ttaagtaatcattaactcttttcctatcatttgattcattgttaaatatacttttatgta 141
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
|||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 142 tacatctagttttacatatttcacaaaagtttttttaataagacgaacgatcaaacatgt 201
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| |||||||||||||||| ||| |||| |||| |||||||||
Sbjct: 202 gccaaaaagtcaacggtgttaaatatttaaaaacagagggagta 245
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgt 196
|||||||||||||||||||| ||||||||||
Sbjct: 77 ttttttgaataagacgaacgatcaaacatgt 47
>RF01058;MIR806;AAAA02017197.1/13871-14114 39946:Oryza sativa Indica
Group
Length = 244
Score = 167 bits (84), Expect = 9e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||| ||||| ||||||||| ||||||||||||| |||||||||||| ||| |||||
Sbjct: 81 ttaagtagttattaattctttttctatcatttgattctttgttaaatatatttttatgta 140
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||||||||||||| || ||||||||||||| ||| ||| |||||||||
Sbjct: 141 ggcatataattttacatatttcacgaaagtttttgaataagaagaatggttaaacatgtg 200
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacgga 233
|||||||||||||||||| ||| |||||||||||||
Sbjct: 201 ctaaaaagtcaacggtgttaaatattttgaaacgga 236
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacgg 212
|||||| ||||||||||||||| |||||||| |||||| || |||||
Sbjct: 79 ttttttaaataagacgaacggttaaacatgtactaaaatgttaacgg 33
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttat 67
||||||||||||| ||| |||||| ||||||||||| || ||||| | ||||| | ||||
Sbjct: 236 tccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccattcttcttat 177
Query: 68 tc 69
||
Sbjct: 176 tc 175
>RF01058;MIR806;AAAA02024901.1/17755-17517 39946:Oryza sativa Indica
Group
Length = 239
Score = 167 bits (84), Expect = 9e-41
Identities = 141/159 (88%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtaca 139
||||||||||| ||||||| ||||||||||||||||||||||||||||| || || |
Sbjct: 80 aagtaattattaattctttccctatcatttgattcattgttaaatatactt--atatata 137
Query: 140 catgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgct 199
||| |||| ||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 138 catatagtattacatatttcacaaaagtttttgaataagacgaacggtcaaatatgtgct 197
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacggagggag 238
|||||||||| |||||||| |||| |||||||||||||
Sbjct: 198 aaaaagtcaatagtgtcaaatatttagaaacggagggag 236
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 tgctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattc 60
||||||||||||||| |||| |||||||| ||||||||||| || | ||||| | |||
Sbjct: 238 tgctccctccgtttctaaatatttgacactattgactttttagcacatatttgaccgttc 179
Query: 61 gttttattc 69
|| ||||||
Sbjct: 178 gtcttattc 170
>RF01058;MIR806;AP008212.1/224770-225009 39947:Oryza sativa Japonica
Group
Length = 240
Score = 167 bits (84), Expect = 9e-41
Identities = 142/160 (88%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttgattcattgttaaatatatttttatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || |||||||||||||| ||| |||| ||||||||||||||||||| |||||
Sbjct: 138 ggcatataattttacatatttca-taaaagtttttaataagacgaacggtcaaatatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||| ||||| |||||||| |||||| |||||
Sbjct: 197 ctaaaaagtcaatggtgttaaacatttcgaaacgaaggga 236
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagt 206
|||||| |||||||| |||||| ||| ||||||||||||||
Sbjct: 76 ttttttaaataagacaaacggttaaatatgtgctaaaaagt 36
>RF01058;MIR806;AACV01001351.1/16768-16517 39947:Oryza sativa
Japonica Group
Length = 252
Score = 167 bits (84), Expect = 9e-41
Identities = 145/165 (87%), Gaps = 4/165 (2%)
Strand = Plus / Plus
Query: 80 aagtaattatttattctttttatatcatttgattcattgttaa----atatactttcatg 135
||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 87 aagtaattattaattcttttcctatcatttgattcattgttaattaaatatactttcatg 146
Query: 136 tacacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatg 195
| ||| ||||||||||||||| | || | |||||||||||||||||||| |||||||
Sbjct: 147 tttgcatatagttttacatattttataaaatattttgaataagacgaacggttaaacatg 206
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 207 tattaaaaagtcaacagtgtcaaacattttgaaacggagggagta 251
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||||||||||||||||| | |||||||||| ||| ||||| | | |||||
Sbjct: 249 ctccctccgtttcaaaatgtttgacactgttgactttttaatacatgtttaaccgttcgt 190
Query: 63 tttattc 69
||||||
Sbjct: 189 cttattc 183
Score = 52.0 bits (26), Expect = 4e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 193 atgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 234
||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 56 atgtgctaaaaagtcaacggtatcaaa-atttagaaacggag 16
>RF01058;MIR806;AL928758.3/19554-19792 4530:Oryza sativa (rice)
Length = 239
Score = 167 bits (84), Expect = 9e-41
Identities = 146/164 (89%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 76 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatactttcatgta 135
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
|| | ||| |||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 136 tacgtatag-tttacatatttcacaaaaattttttgaataagacgaacggtcaaacatat 194
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| ||||| || |||| ||| |||| ||| ||||||
Sbjct: 195 gctaaaaagttaacggcgttaaacgtttagaaatggaaggagta 238
>RF01058;MIR806;AC136525.2/10815-11055 39947:Oryza sativa Japonica
Group
Length = 241
Score = 167 bits (84), Expect = 9e-41
Identities = 142/160 (88%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 79 ttaagtaattattaattcttttcctatcatttgattcatcgttaaatatacgtatatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||||||||||| |||||||||| |||||
Sbjct: 139 tacatatagttttacatatttcacaaaagtttttgaataagac-aacggtcaaatatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||||||| ||||| ||||| ||| |||||||
Sbjct: 198 ctaaaaagtcaacggtatcaaatattttaaaagggaggga 237
>RF01062;MIR812;AP008214.1/19430842-19430670 39947:Oryza sativa
Japonica Group
Length = 173
Score = 165 bits (83), Expect = 4e-40
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 130 ttaattaattattaattctttttctatcatttgattcattgttaaatatacttttatgta 71
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgt 196
|||| |||||||||||||||||| || |||||| ||||||||||||||||||||||||
Sbjct: 70 tacatatagttttacatatttcacaaaattttttaaataagacgaacggtcaaacatgt 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 166 ttttttgaataagacgaacggtcaaacatgt 196
||||||||||||||| || ||||||||||||
Sbjct: 132 ttttttgaataagacaaatggtcaaacatgt 162
>RF01058;MIR806;AAAA02025946.1/5563-5811 39946:Oryza sativa Indica
Group
Length = 249
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||
Sbjct: 86 ttaagtaattatttattctttttttatcattttatttattgttaaatatatttttatgta 145
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||| |||||| || |||||||||||||||||| |||||||||||
Sbjct: 146 tacatatagttttacacatttcataaaagtttttgaataagacgaacagtcaaacatgtt 205
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||| |||||||||||||| || | ||||||||||
Sbjct: 206 taaaaaagtcaatggtgtcaaacatttagagatggagggagta 248
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||| ||||||||||||||||||| || | ||||||||| || ||||||||||||
Sbjct: 84 ttttttaataagacgaacggtcaaatattttaaaaaaagtcagtggcgtcaaacatttt 26
>RF01058;MIR806;AP003911.3/90546-90311 39947:Oryza sativa Japonica
Group
Length = 236
Score = 165 bits (83), Expect = 4e-40
Identities = 144/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||| ||| |||||||| |||||||||||| ||||||||||||| ||| |||||
Sbjct: 74 ttaagtaatcattaattcttttcctatcatttgatttattgttaaatatatttttatgta 133
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||| ||||||||||| ||| |||||||||
Sbjct: 134 tacatatagttttacatatttcacaaaagttttt-aataagacgaatggttaaacatgtg 192
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||| |||||| |||| || ||||||||||||
Sbjct: 193 ctaaaaagtcaacggcgtcaaatatttagagacggagggagta 235
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||| || |||| |||||| ||| ||||||||||| || ||||| | |||||||
Sbjct: 233 ctccctccgtctctaaatatttgacgccgttgactttttagcacatgtttaaccattcgt 174
Query: 63 tttatt 68
|||||
Sbjct: 173 cttatt 168
>RF01058;MIR806;AP008208.1/31541510-31541755 39947:Oryza sativa
Japonica Group
Length = 246
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 83 ttaaataattattaattcttttcctatcatttgattcattgttaaatatacttttatgta 142
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| || ||| ||||||||||| | |||| |||||||| |||||| |||||||||
Sbjct: 143 gacatataatttcacatatttcacacaaattttcaaataagacaaacggttaaacatgtg 202
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 203 ctaaaaagtcaacggtgccaaatatttagaaacggagggagta 245
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgttt 52
||||||||||||| |||| |||| ||||| ||||||||||| || |||||
Sbjct: 243 ctccctccgtttctaaatatttggcaccgttgactttttagcacatgttt 194
>RF01058;MIR806;AACV01022462.1/1486-1246 39947:Oryza sativa Japonica
Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 78 ttaagtaattattgattcttttcctagcatttgattcattgttaaatatactcatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||| ||||| | |||||||||||||||||
Sbjct: 138 tacatatagttttacatatttcacaaaagtttttaaataaaatgaacggtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||| | ||| |||| ||| |||||||||||
Sbjct: 198 ctaaaaagtcaacggtattaaatatttagaatcggagggagta 240
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||| ||||||||||||| | |||||||||| ||| ||||| ||||
Sbjct: 76 ttttttaaataagagaaacggtcaaacatattttaaaaagtcaccggcatcaaatattta 17
Query: 226 gaaacggagggagta 240
|||| ||||||||||
Sbjct: 16 gaaatggagggagta 2
Score = 44.1 bits (22), Expect = 9e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||| ||| |||| ||| | |||| ||||||||||| || ||||||| | ||| |
Sbjct: 238 ctccctccgattctaaatatttaataccgttgactttttagcacatgtttgaccgttcat 179
Query: 63 tttatt 68
||||||
Sbjct: 178 tttatt 173
>RF01058;MIR806;AACV01005659.1/15097-14857 39947:Oryza sativa
Japonica Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| ||||||||||||| |||||||||||||||| ||| |
Sbjct: 78 ttaaataattattaattcttttcctatcatttgattcgttgttaaatatacttttatgca 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 138 tacgtatagttttacatatttcacaaaaatttttgaataagacgaacggtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||| |||||| | |||||||||||||||
Sbjct: 198 ataaaaagtcaacggcgtcaaataaaacgaaacggagggagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaag 205
||||||||||||||||| |||| |||||||||||||||||
Sbjct: 76 ttttttgaataagacgagcggtaaaacatgtgctaaaaag 37
>RF01058;MIR806;AAAA02016981.1/697-450 39946:Oryza sativa Indica
Group
Length = 248
Score = 165 bits (83), Expect = 4e-40
Identities = 206/246 (83%), Gaps = 10/246 (4%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta-gtacgtgtttgatcattcg 61
|||||| | ||||||||||||| ||||| |||||||||| |||||| ||||| |||||
Sbjct: 4 ctccctgcatttcaaaatgtttaacaccattgactttttaagtacgtatttgaccattca 63
Query: 62 ttttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgtta 121
|||||||| || |||||||||||||| |||| ||||||||| ||||||| |||
Sbjct: 64 ttttattc-aaaaattttgagtaattatttatttttttcatatcattttattcattatta 122
Query: 122 aatatactttcatgtaca-------catgtagttttacatatttcactaacttttttgaa 174
|||||||||| ||||| | ||| |||||||||||||||||| || |||||| ||
Sbjct: 123 aatatacttttatgtataatgtatacatatagttttacatatttcacaaattttttt-aa 181
Query: 175 taagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 234
||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct: 182 taagacgaacggttaaacatatgctaaaaagttaacggtgtcaaacattttgaaatagag 241
Query: 235 ggagta 240
||||||
Sbjct: 242 ggagta 247
Score = 54.0 bits (27), Expect = 9e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 225
||||||||||| | ||| ||||||| | || || |||||||||| ||||| |||||||||
Sbjct: 76 tttttgaataaaatgaatggtcaaatacgtacttaaaaagtcaatggtgttaaacatttt 17
Query: 226 gaaacggagggagta 240
|||| | ||||||||
Sbjct: 16 gaaatgcagggagta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
||||||| |||||||||||||||||||| | |||||||||
Sbjct: 245 ctccctctatttcaaaatgtttgacaccgttaactttttag 205
>RF01058;MIR806;AAAA02000446.1/9700-9460 39946:Oryza sativa Indica
Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| ||||||||||| |||| |||||||||||| || ||
Sbjct: 78 ttaaataattattaattcttttcctatcatttgatccattattaaatatacttatatata 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 138 tacatatagttttatatatttcacaaaagttttttaataagatgaacggtcaaacatgtg 197
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 198 ctaaaaagtcaacggtgtcaaatatttagaaacgaagggagta 240
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
|||||| |||||| |||| |||||||||| ||||||||||| || |||||||
Sbjct: 238 ctcccttcgtttctaaatatttgacaccgttgactttttagcacatgtttga 187
>RF01058;MIR806;AC120307.3/45731-45972 39947:Oryza sativa Japonica
Group
Length = 242
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| ||| |||| ||| |||||||||||||||| |||||
Sbjct: 79 ttaagtaattattaattctttttctattatttaatttattgttaaatatacttatatgta 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || |||||||||||| | || | |||||||||||||||||||||||| |||||
Sbjct: 139 tacaaataattttacatattttataaaatcttttgaataagacgaacggtcaaatatgtg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||||| ||||||| |||| |||||||||||||||
Sbjct: 199 ctaaaaagtcaacgatgtcaaatatttagaaacggagggagta 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 168 ttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattttg 226
|||||||||||||||||||| ||| ||||| | |||||||||||||||||||| |||| |
Sbjct: 75 ttttgaataagacgaacggttaaatatgtgtttaaaaagtcaacggtgtcaaatatttag 16
Query: 227 aaacggagggag 238
|||||||||||
Sbjct: 15 taacggagggag 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| |||| ||||||| || ||||||||||| || | ||||| | |||||
Sbjct: 239 ctccctccgtttctaaatatttgacatcgttgactttttagcacatatttgaccgttcgt 180
Query: 63 tttattc 69
||||||
Sbjct: 179 cttattc 173
>RF01058;MIR806;AAAA02015480.1/17515-17756 39946:Oryza sativa Indica
Group
Length = 242
Score = 165 bits (83), Expect = 4e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| ||||| |||||||||||||||||||| || || ||
Sbjct: 79 ttaagtaattattaattcttttcctatcacttgattcattgttaaatatagttatatata 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||
Sbjct: 139 tgcatatagttttacatatttcataaaagtttttgaataagacgaacggtcaaacatatg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| ||||||||| |||| |||| ||||||||||
Sbjct: 199 ctaaaaagtcaatggtgtcaaatatttagaaatggagggagta 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||| |||| |||| ||||||||| ||||||||||| | ||||||| | |||||
Sbjct: 239 ctccctccatttctaaatatttgacaccattgactttttagcatatgtttgaccgttcgt 180
Query: 63 tttattc 69
||||||
Sbjct: 179 cttattc 173
>RF01058;MIR806;AAAA02022891.1/7277-7039 39946:Oryza sativa Indica
Group
Length = 239
Score = 165 bits (83), Expect = 4e-40
Identities = 144/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 77 ttaagtaattattatttatttttctatcatttgatttattgttaaatatactttcatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| ||||||||||||||| || || |||||| |||||||||||| ||||||||||||
Sbjct: 137 tacatatagttttacatattttac-aaatttttttaataagacgaacagtcaaacatgtg 195
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| ||| |||| ||| |||| |||||||||||||||
Sbjct: 196 ctaaaaaaccaatagtgttaaatatttagaaacggagggagta 238
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 125/139 (89%)
Strand = Plus / Plus
Query: 102 tatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcac 161
|||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||
Sbjct: 101 tatcatttgattcattgttaaatatacttttatgtatacatatagttttatatatttcac 160
Query: 162 taacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 221
|| ||||||||||||| ||| |||||||||||||||||||||| |||||||| ||| |
Sbjct: 161 aaaaatttttgaataagatgaatggtcaaacatgtgctaaaaagttaacggtgtaaaata 220
Query: 222 ttttgaaacggagggagta 240
||| |||||||||| ||||
Sbjct: 221 tttagaaacggaggaagta 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
|||||||||||||||||||||||||||||| ||||||||||||| || || |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcgaatatttag 16
Query: 227 aaacggagggagta 240
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AACV01017341.1/5880-5641 39947:Oryza sativa Japonica
Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 144/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttgatttattgttgaatatactttcatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
| || ||||||| ||||||||| ||| |||||| ||||||||||| || ||| ||||
Sbjct: 138 tatatatagttttgcatatttca-taaatttttttaataagacgaatagttaaatatgta 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 197 ctgaaaagttaacggtgtcaaacatttagaaacggagggagta 239
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtac 46
||||||||||||| ||||||||||||||| | |||||| |||||
Sbjct: 237 ctccctccgtttctaaatgtttgacaccgttaacttttcagtac 194
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||| | | |||||||| ||||| ||||||| | |||| ||||
Sbjct: 76 ttttttgaataagacgaatgattaaacatgtttaaaaaaatcaacggcgccaaatattta 17
Query: 226 gaaacggagggagta 240
| || ||||||||||
Sbjct: 16 ggaatggagggagta 2
>RF01058;MIR806;CR855238.1/21532-21767 4530:Oryza sativa (rice)
Length = 236
Score = 163 bits (82), Expect = 1e-39
Identities = 127/142 (89%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| ||| |||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 73 ttaaataactattaattcttttgctatcatttgattcattgttaaatatacttttatgca 132
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 133 tacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgta 192
Query: 198 ctaaaaagtcaacggtgtcaaa 219
||||||||||||| ||||||||
Sbjct: 193 ctaaaaagtcaacagtgtcaaa 214
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 22 tttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
|||||||| | |||||||||||||| ||||||| | ||||| ||||||
Sbjct: 214 tttgacactgttgactttttagtacatgtttgaccgttcgtcttattc 167
>RF01058;MIR806;CR855125.1/44115-44358 4530:Oryza sativa (rice)
Length = 244
Score = 163 bits (82), Expect = 1e-39
Identities = 139/158 (87%)
Strand = Plus / Plus
Query: 83 taattatttattctttttatatcatttgattcattgttaaatatactttcatgtacacat 142
|||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||| | ||
Sbjct: 86 taattattaattatttttctatcatttgattcattgttaaatatacttttatgtataaat 145
Query: 143 gtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaaa 202
|||||||||||||||||| || ||||||||||||||||| |||||| || |||||||
Sbjct: 146 atagttttacatatttcacaaaagtttttgaataagacgaatagtcaaatatttgctaaa 205
Query: 203 aagtcaacggtgtcaaacattttgaaacggagggagta 240
|||| || ||||| ||| |||| |||||||||||||||
Sbjct: 206 aagttaatggtgttaaatatttagaaacggagggagta 243
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||| |||||||||||| ||| ||||||| |||| |||||||| |||||| |||| |
Sbjct: 75 ttttttaataagacgaacagtcgaacatgtttaaaaaggtcaacggcgtcaaatatttag 16
Query: 227 aaacggagggagta 240
| || |||||||||
Sbjct: 15 agacagagggagta 2
>RF01058;MIR806;AC210447.1/112690-112455 4538:Oryza glaberrima
(African rice)
Length = 236
Score = 161 bits (81), Expect = 6e-39
Identities = 136/153 (88%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 78 ttaagtaattattaattattttcctatcatttgattcattgttaaatatatttttatgta 137
Query: 138 cacatgtagttttacatatttcactaac-ttttttgaataagacgaacggtcaaacatgt 196
||| || |||||||||||||| || |||||||||||||||||| | ||||||||||
Sbjct: 138 ggcatataattttacatatttcataaaagttttttgaataagacgaatgatcaaacatgt 197
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaa 229
||||||||||||||||||| |||||||||||||
Sbjct: 198 gctaaaaagtcaacggtgttaaacattttgaaa 230
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| |||||||| |||||| ||| |||||||||||||| ||||| ||||| |||||
Sbjct: 76 tttttttaataagacaaacggtaaaatatgtgctaaaaagttaacggcctcaaatatttt 17
Query: 226 gaaacggagggagta 240
||||||||| |||||
Sbjct: 16 gaaacggagcgagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 12 tttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgttttattc 69
||||||||||||| |||||| ||||||||||| || ||||||||||||||| ||||||
Sbjct: 230 tttcaaaatgtttaacaccgttgactttttagcacatgtttgatcattcgtcttattc 173
>RF01058;MIR806;AAAA02035408.1/5345-5101 39946:Oryza sativa Indica
Group
Length = 245
Score = 161 bits (81), Expect = 6e-39
Identities = 141/160 (88%), Gaps = 2/160 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||
Sbjct: 79 ttaagtaattatttattcttttcatatcatttgatttattgttaaatatactttcgtgta 138
Query: 138 cacatgtagttttacatatttcac--taacttttttgaataagacgaacggtcaaacatg 195
||| | |||||||||||||||||| || ||||||| |||||||||| ||||||||
Sbjct: 139 cacctatagttttacatatttcacaaaaaaaattttgaaaaagacgaacgatcaaacata 198
Query: 196 tgctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
| ||||||| || |||||||||||||||||||||||||
Sbjct: 199 tatcaaaaagttaatggtgtcaaacattttgaaacggagg 238
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 cctccgtttcaaaatgtttgacacc 30
|||||||||||||||||||||||||
Sbjct: 238 cctccgtttcaaaatgtttgacacc 214
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||||||||| |||| ||| ||||||||||||| ||||||
Sbjct: 44 ctaaaaagtcaatagtgttaaatattttgaaacggatggagta 2
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 161 bits (81), Expect = 6e-39
Identities = 138/157 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| |||||||||||||||||||| ||||| ||| |||||
Sbjct: 77 ttaagtaattattaatttttttcctatcatttgattcattgttatatatatttttatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| ||||||||| || |||| || ||||||||||||||||||||||
Sbjct: 137 gacatatagttttatatatttcacaaaagcttttaaaaaagacgaacggtcaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggag 234
|||||||||||| ||||||||| |||| |||||||||
Sbjct: 197 ctaaaaagtcaatggtgtcaaatatttagaaacggag 233
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 7 ctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||| |||| ||||||||| ||||||||||| || |||||||
Sbjct: 233 ctccgtttctaaatatttgacaccattgactttttagcacatgtttga 186
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgt 196
|||||||||||||||||| |||||| |||||
Sbjct: 75 ttttttgaataagacgaatggtcaatcatgt 45
>RF01058;MIR806;AP008212.1/5644176-5643940 39947:Oryza sativa
Japonica Group
Length = 237
Score = 161 bits (81), Expect = 6e-39
Identities = 199/236 (84%), Gaps = 9/236 (3%)
Strand = Plus / Plus
Query: 7 ctccgtttcaaaatgtttgacaccgctgacttttt-agtacgtgtttgatcattcgtttt 65
||||||||||||||||||||||||| | | ||||| ||||||||||||| ||||||| ||
Sbjct: 8 ctccgtttcaaaatgtttgacaccgttaaattttttagtacgtgtttgaccattcgtctt 67
Query: 66 attccnnnnnnnttaagtaattatttattctttttatatcat-ttgattcattgttaaat 124
||| ||||||||||||||| |||| | |||| |||||||||||||||||
Sbjct: 68 attaaaaaa-----aagtaattatttattgttttcacatcaaattgattcattgttaaat 122
Query: 125 atactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaac 184
||||||| |||||||||| ||||||||||||||||| | |||||| ||||||| ||||
Sbjct: 123 atacttttatgtacacatatagttttacatatttca--tattttttttaataagatgaac 180
Query: 185 ggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| | | || ||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 181 ggttagatatatgctaaaaagtcaacagtgtcaaatattttgaaacggatggagta 236
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtc-aacggtgtcaaacattt 224
|||||| ||||||||||| ||||||||| || ||||||| | |||||||||||||||||
Sbjct: 77 tttttttaataagacgaatggtcaaacacgtactaaaaaatttaacggtgtcaaacattt 18
Query: 225 tgaaacggag 234
||||||||||
Sbjct: 17 tgaaacggag 8
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttag 43
|||| ||||||||||||| |||||||| | |||||||||||
Sbjct: 234 ctccatccgtttcaaaatatttgacactgttgactttttag 194
>RF01058;MIR806;AACV01032451.1/2709-2462 39947:Oryza sativa Japonica
Group
Length = 248
Score = 159 bits (80), Expect = 2e-38
Identities = 123/136 (90%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 106 atttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaa- 164
|||| |||||||| |||||||||||||||||| |||| |||||||||||||||||| ||
Sbjct: 112 atttaattcattgctaaatatactttcatgtatacatatagttttacatatttcacaaaa 171
Query: 165 cttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 224
||||||||||||||| |||||||||||||| |||||||| || ||||||| ||||||||
Sbjct: 172 cttttttgaataagaagaacggtcaaacatatgctaaaatatctacggtgttaaacattt 231
Query: 225 tgaaacggagggagta 240
|||||||||||||||
Sbjct: 232 agaaacggagggagta 247
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 200 aaaaagtcaacggtgtcaaacattttgaaacgga 233
||||| ||||||| |||||| |||||||||||||
Sbjct: 43 aaaaaatcaacggcgtcaaatattttgaaacgga 10
>RF01058;MIR806;AACV01000504.1/7262-7027 39947:Oryza sativa Japonica
Group
Length = 236
Score = 159 bits (80), Expect = 2e-38
Identities = 144/163 (88%), Gaps = 3/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 76 ttaaataattattaattcttttcctattatttgattcattgttaaatatacttttatgta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| || |||||||||||||| ||| |||||| |||||||||| |||||||||| ||
Sbjct: 136 tacatatatttttacatatttca-taattttttt--ataagacgaatggtcaaacatatg 192
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 193 ctaaaaagttagcggtgtcaaacaattagaaacggagggagta 235
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
||||||||||||| || |||||||||||||| ||||||||| | ||||||| |||||||
Sbjct: 233 ctccctccgtttctaattgtttgacaccgctaactttttagcatatgtttgaccattcgt 174
Query: 63 tttat 67
||||
Sbjct: 173 cttat 169
>RF01058;MIR806;AAAA02022756.1/988-749 39946:Oryza sativa Indica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 144/164 (87%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 76 ttaagtaattattaattctttttctatcatttgattcattgttaaatatatttttatgta 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
||| || ||||| ||||||||| || ||||| ||||||| || ||||| |||||||
Sbjct: 136 ggcatataattttatatatttcacaaaagtttttaaataagatgattggtcagacatgtg 195
Query: 198 c-taaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 196 cttaaaaagttaacggtgtcaaacattttaaaacggagggagta 239
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||||||| |||||||||||||||| | ||||||||
Sbjct: 237 ctccctccgttttaaaatgtttgacaccgttaacttttta 198
>RF01058;MIR806;AC134046.4/162313-162553 39947:Oryza sativa Japonica
Group
Length = 241
Score = 159 bits (80), Expect = 2e-38
Identities = 145/164 (88%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||| |||||||| |||||||| |||||||||||| |||||||||||| |||||||||
Sbjct: 78 ttaaataattattaattcttttcctatcatttgatttgttgttaaatatattttcatgta 137
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
|||| |||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 138 tacatatagttttacatatttcacaaaagttttttgaataagacgaacggtcaaacatgt 197
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|| |||||||||||| ||||| |||| |||||| ||||||||
Sbjct: 198 act-aaaagtcaacggcatcaaatatttagaaacgaagggagta 240
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||||||||| | | |||| ||||||| ||| | |||||| ||||
Sbjct: 76 ttttttgaataagacgaacggttatatatgtttaaaaaagttaactgcgtcaaatattta 17
Query: 226 gaaacggagggagta 240
|||||||||| ||||
Sbjct: 16 gaaacggaggaagta 2
>RF01058;MIR806;AAAA02008185.1/15144-15373 39946:Oryza sativa Indica
Group
Length = 230
Score = 159 bits (80), Expect = 2e-38
Identities = 196/236 (83%), Gaps = 12/236 (5%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||| |||||||||||||||| ||| |||||||||||||||||| ||||| |
Sbjct: 4 ctccctccgttttaaaatgtttgacaccgttgattttttagtacgtgtttgaccattcat 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
|||||| |||| |||||||||||| |||| |||| || |||
Sbjct: 64 cttattc-aaaaaatttaaataattatttattattttcatat----------atagtttt 112
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||||||||||| || |||||||| ||||||||| || |||||| ||||||||||
Sbjct: 113 atatattttcatgtacatatatagttttatatatttcac-aattttttttaataagacga 171
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggag 238
||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 172 acggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacggatggag 227
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||| ||| ||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 76 ttttttgaataagatgaatggtcaaacacgtactaaaaaatcaacggtgtcaaacatttt 17
Query: 226 gaaacggagggagta 240
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||| ||||||| |||||||||||||||| ||||||||||| |||||||||| | |||||
Sbjct: 227 ctccatccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcgt 168
Query: 63 tttatt 68
|||||
Sbjct: 167 cttatt 162
>RF01058;MIR806;AP008214.1/20372442-20372205 39947:Oryza sativa
Japonica Group
Length = 238
Score = 159 bits (80), Expect = 2e-38
Identities = 144/164 (87%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 74 ttaagtaattattaattctttttttatcatttgatttattgttaaatatacttttatgta 133
Query: 138 cacatgtagttttacatatttcac-taacttttttgaataagacgaacggtcaaacatgt 196
|||| |||||||||| ||||||| || |||||| |||||||||||| |||||||||||
Sbjct: 134 tacatatagttttacacatttcacaaaagttttttaaataagacgaacagtcaaacatgt 193
Query: 197 gctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||||||||| |||||| |||| | || ||||||||||
Sbjct: 194 ttaaaaaagtcaacggcgtcaaatatttaggaaaggagggagta 237
>RF01058;MIR806;AAAA02025369.1/9182-8958 39946:Oryza sativa Indica
Group
Length = 225
Score = 159 bits (80), Expect = 2e-38
Identities = 126/140 (90%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 101 atatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttca 160
||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 86 atatcatttgatttattgttaaatatactttcatggacacatatagttttacatatttca 145
Query: 161 ctaacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaac 220
| || |||||| |||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 146 c-aaatttttttaataggacgaactgtcaaacatgtgctaaaaagtcaattgtgtcaaaa 204
Query: 221 attttgaaacggagggagta 240
||||| ||| || |||||||
Sbjct: 205 attttaaaatggtgggagta 224
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
||||||||||||| |||| ||||||||| || |||||||||||||||||||| |||||||
Sbjct: 76 ttttttgaataaggcgaatggtcaaacaggtactaaaaagtcaacggtgtcagacatttt 17
Query: 226 gaaacgga 233
||||||||
Sbjct: 16 gaaacgga 9
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 8 tccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcg 61
||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||
Sbjct: 9 tccgtttcaaaatgtctgacaccgttgactttttagtacctgtttgaccattcg 62
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 195/233 (83%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttgatcattcgt 62
|||||||||||||||||||||||| |||| ||||||||||| || ||||| | | |||||
Sbjct: 4 ctccctccgtttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttcgt 63
Query: 63 tttattccnnnnnnnttaagtaattatttattctttttatatcatttgattcattgttaa 122
||||| ||||||||||||| ||| ||||| ||||||||||||| |||||||
Sbjct: 64 cttatta-aaaaaatttaagtaattattaatt-tttttctatcatttgattcgttgttaa 121
Query: 123 atatactttcatgtacacatgtagttttacatatttcactaacttttttgaataagacga 182
||||| ||| ||||| | || || |||||||||||| | || |||||||||||||| |
Sbjct: 122 atatatttttatgtagatatataattttacatattttataaaagtttttgaataagacaa 181
Query: 183 acggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 235
||||| |||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 182 acggttaaacatgtgctaaaaagtcaacggtgctaaatattttgaaacagagg 234
Score = 125 bits (63), Expect = 3e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 76 tttttttaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacatttt 17
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AP005460.3/5216-5454 39947:Oryza sativa Japonica
Group
Length = 239
Score = 159 bits (80), Expect = 2e-38
Identities = 143/163 (87%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||| |||| ||||||| ||||| ||||||||||||||| || ||
Sbjct: 78 ttaagtaattattaattattttcctatcattagattccttgttaaatatactt--atata 135
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||| |||||||||||||||||||||| ||
Sbjct: 136 tacatatagttttacatatttcacaaaagtttttaaataagacgaacggtcaaacatttg 195
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||||||| |||||||||||||| |||| |||| ||||||||||
Sbjct: 196 ctaaaaaatcaacggtgtcaaatatttagaaatggagggagta 238
>RF01058;MIR806;AC138454.2/100226-100465 39947:Oryza sativa Japonica
Group
Length = 240
Score = 159 bits (80), Expect = 2e-38
Identities = 141/160 (88%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| |||||||||||| ||||||||||||| || |||||
Sbjct: 78 ttaagtaattattaattctttttctatcatttgattaattgttaaatatatttatatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|| | |||||||||||||||||| || |||||| |||||||| |||| | |||||||||
Sbjct: 138 tacctatagttttacatatttcac-aaatttttttaataagacaaacgattaaacatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggaggga 237
|||||||||||| ||||| ||| |||| ||||||||||||
Sbjct: 197 ctaaaaagtcaatggtgttaaatatttagaaacggaggga 236
>RF01058;MIR806;AAAA02013339.1/3689-3928 39946:Oryza sativa Indica
Group
Length = 240
Score = 157 bits (79), Expect = 9e-38
Identities = 130/147 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||| |||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 77 ttaagtaattattaattccttttctatcatttgattcattgttaaaaatatttttatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||
Sbjct: 137 tacatatagttttacatatttcacgaatgtttttgaataagacgaacggtcaaatatgtt 196
Query: 198 ctaaaaagtcaacggtgtcaaacattt 224
||||||||||| || |||||| ||||
Sbjct: 197 ttaaaaagtcaatggcgtcaaatattt 223
>RF01058;MIR806;AACV01025602.1/829-590 39947:Oryza sativa Japonica
Group
Length = 240
Score = 157 bits (79), Expect = 9e-38
Identities = 130/147 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| | | ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 77 ttaagtaattattaaatttttttctatcatttgattcattgttaaatatacttttatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||| |||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 137 tacatatagttttatatatttcataaaaatttttgaataagacgaatggtcaaacatgtt 196
Query: 198 ctaaaaagtcaacggtgtcaaacattt 224
||||||||||||| |||||||||||
Sbjct: 197 ttaaaaagtcaacgaggtcaaacattt 223
>RF01058;MIR806;AP006856.2/2894-3132 39947:Oryza sativa Japonica
Group
Length = 239
Score = 157 bits (79), Expect = 9e-38
Identities = 143/163 (87%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
|||||||||| || |||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 77 ttaagtaattgttaattcttttcctatcatttgatttattgttaaatatacttatatgta 136
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || ||||| ||||||||||||||||||| |||||
Sbjct: 137 tacatatagttttacatatttcacaaaagttttttaataagacgaacggtcaaatatgtg 196
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
|||||| | ||| |||||||| |||| |||||||||||||||
Sbjct: 197 ttaaaaa-taaactgtgtcaaatatttagaaacggagggagta 238
>RF01058;MIR806;AACV01004906.1/16108-16348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 157 bits (79), Expect = 9e-38
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 106 atttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaac 165
|||||||||||||||||||||||||| ||| | |||| |||||||||||||||||| ||
Sbjct: 106 atttgattcattgttaaatatacttttatgcatacatatagttttacatatttcacaaaa 165
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
|||||||||||||||| | |||||||||||||||||||||||||||||||||| |
Sbjct: 166 gtttttgaataagacgagcagtcaaacatgtgctaaaaagtcaacggtgtcaaataaaac 225
Query: 226 gaaacggagggagta 240
|||||||||||||||
Sbjct: 226 gaaacggagggagta 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtg 197
||||||||||||||||| |||| |||||||||
Sbjct: 76 ttttttgaataagacgagcggtaaaacatgtg 45
>RF01058;MIR806;AAAA02014718.1/60336-60096 39946:Oryza sativa Indica
Group
Length = 241
Score = 157 bits (79), Expect = 9e-38
Identities = 119/131 (90%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 110 gattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaactttt 169
||||||| |||||||||||||| |||||||||| |||||||| ||||||||| || ||||
Sbjct: 111 gattcatggttaaatatactttgatgtacacatatagttttatatatttcac-aattttt 169
Query: 170 ttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 229
|| ||||| |||||| || ||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 170 tttaataaaacgaacagtgaaacatgtgttaaaaagtcaacgatgtcaaacattttgaaa 229
Query: 230 cggagggagta 240
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 166 ttttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattt 224
|||||| ||||||| ||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 77 ttttttaaataagatgaatggtcaaacacgtatttaaaaagtcaacggtgtcaaacattt 18
Query: 225 tgaaacggagggagta 240
| ||| ||||||||||
Sbjct: 17 taaaagggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgacttttta 42
|||||||||||||||||||||||||| || ||||||||||
Sbjct: 238 ctccctccgtttcaaaatgtttgacatcgttgacttttta 199
>RF01058;MIR806;AACV01020588.1/927-1160 39947:Oryza sativa Japonica
Group
Length = 234
Score = 157 bits (79), Expect = 9e-38
Identities = 124/139 (89%)
Strand = Plus / Plus
Query: 102 tatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcac 161
||||||||||||||||||||||||||||| ||||| | || || |||||||||||| ||
Sbjct: 95 tatcatttgattcattgttaaatatacttatatgtatatatataattttacatattttac 154
Query: 162 taacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 221
|| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 155 aaaaatttttgaataagataaacggtcaaacatgtgctaaaaagtcaacaatgtcaaaca 214
Query: 222 ttttgaaacggagggagta 240
||| |||||||||||||||
Sbjct: 215 tttagaaacggagggagta 233
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
||||||||||||| |||||||||||| | ||||||||||| || |||||||
Sbjct: 231 ctccctccgtttctaaatgtttgacattgttgactttttagcacatgtttga 180
>RF01058;MIR806;AAAA02015190.1/1619-1379 39946:Oryza sativa Indica
Group
Length = 241
Score = 157 bits (79), Expect = 9e-38
Identities = 130/147 (88%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattcttttcctatcatttgagtcattgttaaatatacttttatgta 137
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| |||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 138 tacatatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacgtgta 197
Query: 198 ctaaaaagtcaacggtgtcaaacattt 224
||||||||||| | |||||| ||||
Sbjct: 198 taaaaaagtcaacagcgtcaaatattt 224
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 226
||||||||||||||||||||| |||||| | ||||||| ||| | |||||| |||| |
Sbjct: 75 tttttgaataagacgaacggttaaacatatttaaaaaagtaaaccgcgtcaaatatttag 16
Query: 227 aaacggaggga 237
||||| |||||
Sbjct: 15 aaacgaaggga 5
>RF01058;MIR806;AP004278.2/128439-128198 39947:Oryza sativa Japonica
Group
Length = 242
Score = 157 bits (79), Expect = 9e-38
Identities = 142/163 (87%)
Strand = Plus / Plus
Query: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 79 ttaagtaattattaattctttttctattatttgattcattgttaaatatacttatatgtg 138
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
|||| || |||||||||||||| || ||||||||||||| || |||||||||||||
Sbjct: 139 tacatatatttttacatatttcataaaagtttttgaataagataaatggtcaaacatgtg 198
Query: 198 ctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
||| |||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 199 ctataaagtcaacggtatcaaatatttagaaacggagagagta 241
