miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 254 bits (128), Expect = 3e-67
Identities = 146/152 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatac 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 190 bits (96), Expect = 4e-48
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 246 bits (124), Expect = 7e-65
Identities = 142/148 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 93 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 182 bits (92), Expect = 9e-46
Identities = 134/148 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||||||||||| ||||||||||||||| |||| |||
Sbjct: 70 tctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 246 bits (124), Expect = 7e-65
Identities = 139/144 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||
Sbjct: 70 tctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattaga 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 157 acttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| |||| | |||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 97 tgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 238 bits (120), Expect = 2e-62
Identities = 144/152 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 157 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||
Sbjct: 97 tgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 214 bits (108), Expect = 3e-55
Identities = 135/144 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | |||||| | ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 70 tctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 238 bits (120), Expect = 2e-62
Identities = 141/148 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 206 bits (104), Expect = 6e-53
Identities = 137/148 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | | |||||||||||| |||||||||||||||| |||||| |||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 230 bits (116), Expect = 4e-60
Identities = 137/144 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 153 cctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
Sbjct: 93 tctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaa 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||| | |||||||||||||| ||||||||||||||||||||||
Sbjct: 66 tgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||| | |||||||||
Sbjct: 126 tagaatgacttacattgtgatacggagggagt 157
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 230 bits (116), Expect = 4e-60
Identities = 143/152 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgt 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 174 bits (88), Expect = 2e-43
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||| ||||||||||||||| |||||| |||
Sbjct: 93 tctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 230 bits (116), Expect = 4e-60
Identities = 143/152 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 157 acttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 97 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||||||||| |||||||||
Sbjct: 37 tataatgacttacattgtgaaacggagggagt 6
Score = 182 bits (92), Expect = 9e-46
Identities = 131/144 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 70 tctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaa 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 130 atgacttatattgtgaaacggagg 153
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 222 bits (112), Expect = 1e-57
Identities = 143/152 (94%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagt 156
Score = 198 bits (100), Expect = 2e-50
Identities = 134/144 (93%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | || ||| || |||||||||||||||||||||||||||||||||||| |||
Sbjct: 92 tctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 142/152 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 157 acttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 97 tgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatga 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 167 bits (84), Expect = 5e-41
Identities = 129/144 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||||| ||||||||||| |||||| |||
Sbjct: 70 tctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 139/148 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 70 tctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtgga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| ||| |||||
Sbjct: 130 atgacttacattatgaaacggaaggagt 157
Score = 186 bits (94), Expect = 6e-47
Identities = 133/146 (91%)
Strand = Plus / Minus
Query: 7 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 66
||||||||| |||||||||||||| | ||||| ||||||||||||||||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 67 tagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaat 126
|||| | |||||| | |||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 127 gacttacattgtgaaatggagggagt 152
|||||||||||||||| |||||||||
Sbjct: 31 gacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 142/152 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||| ||||||||||||||||||||||||||||||| ||||||||||||| | | |||||
Sbjct: 66 tgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 126 tagaatgacttatattgtgaaacggagggagt 157
Score = 174 bits (88), Expect = 2e-43
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||| ||||||||||||||| |||||||| ||||| |||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 142/152 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 190 bits (96), Expect = 4e-48
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||||||||||||| ||||||||||||||||||| | |
Sbjct: 93 tctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaa 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 216 bits (109), Expect = 7e-56
Identities = 142/152 (93%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6 acttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatgc 123
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||| || |||||||||
Sbjct: 124 tagaatgacttacattgtggaacggagggagt 155
Score = 184 bits (93), Expect = 2e-46
Identities = 132/144 (91%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 151 cctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| | ||||||||||||| |||||||||||||||||||||||| | ||||| |||
Sbjct: 91 tctag--acatatatatgtctacattcattaacatcaatatgaatgtagaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
||||||||||||||| || |||||
Sbjct: 33 atgacttacattgtggaacggagg 10
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||| | ||||||||||||||||| |||||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 66 tgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 126 tagaatgacttatattgtgaaacggagggagt 157
Score = 190 bits (96), Expect = 4e-48
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| |||||| | ||||||||||||||||| ||||||||||||| ||| || |||
Sbjct: 93 tctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaagttaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||
Sbjct: 66 tgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaattc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||| ||||||||| |||||||||
Sbjct: 126 taaaatgacttagattgtgaaacggagggagt 157
Score = 174 bits (88), Expect = 2e-43
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||| |||||||
Sbjct: 153 cctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 93 tctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 138/148 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| ||| || |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 70 tttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
Score = 174 bits (88), Expect = 2e-43
Identities = 133/148 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||| ||| ||||| || ||||||||||||| ||||| | |
Sbjct: 93 tctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctata 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 138/148 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 153 cctccgttccacaatataagtcattctagcatttttcacattcatattgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 167 bits (84), Expect = 5e-41
Identities = 132/148 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | | |||||||||||| ||||||||||||||| ||||| |||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||| |||||| || |||||||||
Sbjct: 130 atgacttatattgtggaacggagggagt 157
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 66 tgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 167 bits (84), Expect = 5e-41
Identities = 129/144 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| ||||||||||||||||| |||||||| |||| |||| |||
Sbjct: 93 tctagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||| ||||||| ||||||||||||||||||||||| || | |||
Sbjct: 66 tgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 182 bits (92), Expect = 9e-46
Identities = 131/144 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||| | ||||| | ||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 93 tatagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 141/152 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 157 acttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 97 tgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|| |||||||||| |||||||| |||||||||
Sbjct: 37 aaaaatgacttactttgtgaaacggagggagt 6
Score = 151 bits (76), Expect = 3e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||| |||||||||| | |||||| ||||||| ||||||||||| |||||
Sbjct: 10 cctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||| | | ||||||||||||||||||||||| ||||||||||||| | |
Sbjct: 70 tctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaa 129
Query: 125 atgacttacattgtgaaatggagg 148
||||||||| |||||||| |||||
Sbjct: 130 atgacttactttgtgaaacggagg 153
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 212 bits (107), Expect = 1e-54
Identities = 144/156 (92%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatat----tgatg 56
|||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatg 65
Query: 57 ttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaa 116
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 ttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaa 125
Query: 117 atgtaagaatgacttacattgtgaaatggagggagt 152
||| ||||||||||||||||||||| |||||||||
Sbjct: 126 atgctagaatgacttacattgtgaaacggagggagt 161
Score = 165 bits (83), Expect = 2e-40
Identities = 132/148 (89%), Gaps = 4/148 (2%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 98
Query: 65 tctagatagatatatatgtctagattcattaacatca----atatgaatgtgggaaatgt 120
|||||| | |||||| | ||||||||||||||||||| ||||||| || ||||||
Sbjct: 97 tctagacatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 208 bits (105), Expect = 2e-53
Identities = 138/148 (93%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 93 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 168 bits (85), Expect = 1e-41
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | | |||||| |||||||||||||| ||||| |||||| |||
Sbjct: 70 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 127
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagt 155
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 208 bits (105), Expect = 2e-53
Identities = 138/148 (93%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 67
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 68 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 127
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagt 155
Score = 168 bits (85), Expect = 1e-41
Identities = 133/148 (89%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | | |||||| |||||||||||||| ||||| |||||| |||
Sbjct: 91 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 206 bits (104), Expect = 6e-53
Identities = 138/148 (93%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||| ||||||||||| ||||||| ||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgttttacaatgtaagttattctagt-tttcccacattcatattgatattaatgaa 68
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 69 tctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaatattaga 128
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 129 atgacttacattgtgaaacggagggagt 156
Score = 182 bits (92), Expect = 9e-46
Identities = 135/148 (91%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaa 93
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||||||||||| |||||||||||||||||||| | |||
Sbjct: 92 tctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaaact-aga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|| ||||||||||| ||| |||||||||
Sbjct: 33 ataacttacattgtaaaacggagggagt 6
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 206 bits (104), Expect = 6e-53
Identities = 140/152 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |||
Sbjct: 6 acttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 66 tgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 190 bits (96), Expect = 4e-48
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| ||||||||| |||||||||||| |||| |||||||||||| |||| |||
Sbjct: 93 tctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
||||| |||||||||||| |||||
Sbjct: 33 atgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 206 bits (104), Expect = 6e-53
Identities = 141/152 (92%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 6 acttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||| |||||| ||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 66 tgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagt 156
Score = 159 bits (80), Expect = 1e-38
Identities = 129/144 (89%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaa 93
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| |||| | | ||||||||||||| |||||||||||||||| |||||| |||
Sbjct: 92 tctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
||||||||||||| |||| |||||
Sbjct: 33 atgacttacattgcgaaacggagg 10
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 135/146 (92%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 66
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 67 tagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaat 126
|||||||||||||||||||||||||||||| ||||| |||||| | | ||||| |||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 127 gacttacattgtgaaatggagggagt 152
|||||||||||||||| |||||||||
Sbjct: 132 gacttacattgtgaaacggagggagt 157
Score = 190 bits (96), Expect = 4e-48
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| ||| |||||
Sbjct: 33 atgacttacattgtgaaacggaaggagt 6
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| | || ||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||
Sbjct: 66 tgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||||||||| |||||||||
Sbjct: 126 taaaatgacttacattgtgaaacggagggagt 157
Score = 167 bits (84), Expect = 5e-41
Identities = 129/144 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| ||||||||||||||| || | ||||||||||||||||| |||
Sbjct: 93 tctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 6 acttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||||| |||| ||||||||| |||||||||
Sbjct: 126 tagaatggcttatattgtgaaacggagggagt 157
Score = 167 bits (84), Expect = 5e-41
Identities = 129/144 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||| |||||||||||||| |||||| ||||||||| |||||||
Sbjct: 153 cctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 93 tctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatgctaca 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 192 bits (97), Expect = 1e-48
Identities = 138/152 (90%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||| |||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 66 tgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaatgc 119
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 120 tagaatgacttatattgtgaaacggagggagt 151
Score = 161 bits (81), Expect = 3e-39
Identities = 128/144 (88%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||
Sbjct: 147 cctccgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaa 88
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||| |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 87 tctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||| |||||| | |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 70 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
||| |||||||||||||| |||||||||
Sbjct: 130 atgtcttacattgtgaaacggagggagt 157
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||
Sbjct: 153 cctccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||||||||||||| | | |||| |||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatttctagtgaaaatactaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 190 bits (96), Expect = 4e-48
Identities = 137/152 (90%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatctagaca---------ttctagattcattaacatcaatatgaatgtgggaaatgc 116
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 117 tagaatgacttacattgtgaaacggagggagt 148
Score = 190 bits (96), Expect = 4e-48
Identities = 131/144 (90%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 85
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 84 tctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 123/132 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||||||| |||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 93 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 34
Query: 125 atgacttacatt 136
||||||||||||
Sbjct: 33 atgacttacatt 22
Score = 178 bits (90), Expect = 1e-44
Identities = 132/146 (90%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatc 66
|||||| || |||||||||||||||| ||||| |||||||||||| | ||||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 67 tagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaat 126
|||||| ||||| ||||||||||||||||||| | |||||||||||| ||||| |||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 127 gacttacattgtgaaatggagggagt 152
|||||||||||||||| |||||||||
Sbjct: 132 gacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||| ||||| ||||||||||||||||||||| ||||||||||| |||||| | |
Sbjct: 93 tctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaa 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||| ||||||| |||||||||
Sbjct: 33 atgacttacaatgtgaaacggagggagt 6
Score = 167 bits (84), Expect = 5e-41
Identities = 132/148 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||||||| | ||||||||| |||||| |||||||||||||||||| |||
Sbjct: 70 tctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 186 bits (94), Expect = 6e-47
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatatat 81
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgactt 131
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatatat 81
||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgactt 131
|||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 186 bits (94), Expect = 6e-47
Identities = 106/110 (96%)
Strand = Plus / Minus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatatat 81
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgactt 131
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatatat 81
||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgactt 131
| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 184 bits (93), Expect = 2e-46
Identities = 132/144 (91%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||| ||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 91 tctagat--atatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
Score = 161 bits (81), Expect = 3e-39
Identities = 135/152 (88%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||||| |||||| ||||||||||| | |||||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| ||| | |||||||| ||||||||||||||||| | |||||||||| |||||
Sbjct: 66 tgaatttag--acatatatatatctagattcattaacatgagtatgaatgtgaaaaatgc 123
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 124 tagaatgacttacattgtgaaacggagggagt 155
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 184 bits (93), Expect = 2e-46
Identities = 132/144 (91%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||||| ||||||| |||||||||||||||||||| || |||||||||| |||
Sbjct: 70 tctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaaatgctaga 127
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 128 atgacttatattgtgaaacggagg 151
Score = 176 bits (89), Expect = 6e-44
Identities = 137/152 (90%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||||| |||| || |||||||||||||
Sbjct: 155 acttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaa 96
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| || | || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 95 tgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 182 bits (92), Expect = 9e-46
Identities = 137/152 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||| |||| | ||||||||||||| |||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgttccacagtataagtcattctagtattttccatattcatattgatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| ||||||||||||||||| ||||||||||| ||||||||||||| || |||||||
Sbjct: 66 tgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatgt 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| |||||| || |||||||||
Sbjct: 126 tagaatgacttatattgtggaacggagggagt 157
Score = 103 bits (52), Expect = 7e-22
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||| |||||| |||||||||||| ||||| || ||||||||||||| |||||||
Sbjct: 153 cctccgttccacaatataagtcattctaacatttctcatattcatattgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | |||||| | |||| |||||||| ||||||||||||| ||| |||| |||
Sbjct: 93 tctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaatactaga 34
Query: 125 atgactta 132
||||||||
Sbjct: 33 atgactta 26
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 176 bits (89), Expect = 6e-44
Identities = 130/144 (90%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 147 cctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgag 88
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||||||||| |||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 87 tttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 161 bits (81), Expect = 3e-39
Identities = 134/152 (88%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt--- 62
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| | || ||| | |||| | |||||||||||||||||||||||| ||| |
Sbjct: 63 ---atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggc 119
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 120 tagaatgacttacattgtgaaacggagggagt 151
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 176 bits (89), Expect = 6e-44
Identities = 136/152 (89%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||| | || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 66 tgaatctag------acatctgtctagattcattgacatcaatatgaatgtgggaaatgc 119
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 120 tagaatgacttacattatgaaacggagggagt 151
Score = 176 bits (89), Expect = 6e-44
Identities = 130/144 (90%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 147 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaa 88
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| || ||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 87 tctagacag------atgtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 133/148 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| | | |||||||| || |||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||||||||||||||||||||||| |||| || |||||||||||||||||| |||
Sbjct: 70 tctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 130 atgacttacattatgaaacggagggagt 157
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| |||||||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | | |||||||| |||| || |||||||| | ||||||| |||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 33 atgacttacattatgaaacggagggagt 6
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 133/148 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||| ||| | ||||| |||||||||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||
Sbjct: 93 tctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 33 atgacttacattatgaaacggagggagt 6
Score = 151 bits (76), Expect = 3e-36
Identities = 130/148 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||| |||||||||| ||||| ||| |||
Sbjct: 70 tctagacatatatatctatctagattcattagcatcaatatggatgtgaacaatagtaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 130 atgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 2e-43
Identities = 133/148 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| ||||||||||||||||||||| |||| |||||||||||| ||||| |||
Sbjct: 93 tctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 33 atgacttacattatgaaacggagggagt 6
Score = 151 bits (76), Expect = 3e-36
Identities = 130/148 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||||| | ||||||||||||| |||| ||||| ||||| |||| |||
Sbjct: 70 tctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 130 atgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 172 bits (87), Expect = 9e-43
Identities = 134/152 (88%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 66 tgaatc------------tatgtctagtttcattaacatcaatatgaatgtgggaaatgc 113
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| ||||||||
Sbjct: 114 tagaatgacttacattgtgaaaccgagggagt 145
Score = 133 bits (67), Expect = 8e-31
Identities = 123/144 (85%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 141 cctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| | ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 81 actagaca------------tagattcattaacatcaatatgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 170 bits (86), Expect = 3e-42
Identities = 136/152 (89%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||||
Sbjct: 66 tgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatgg 122
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||||||||||||| ||||| |||||||||
Sbjct: 123 tggaatgacttacattatgaaacggagggagt 154
Score = 123 bits (62), Expect = 7e-28
Identities = 124/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||| | ||||| ||||||||||||||||| |||| |
Sbjct: 150 cctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatgga 91
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| ||||| | ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 90 tctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaatactaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 168 bits (85), Expect = 1e-41
Identities = 129/144 (89%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgag 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||||||||| |||||||||||| |||||||||||||| ||| ||||| |||
Sbjct: 70 tttagatagatacatatgtctagat------acatcaatatgaatatggaaaatgctaga 123
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 124 atgacttacattgtgaaacggagg 147
Score = 153 bits (77), Expect = 8e-37
Identities = 133/152 (87%), Gaps = 6/152 (3%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 151 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt--- 95
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| | || ||| | |||| | ||||||||||| |||||||||||| |||||
Sbjct: 94 ---atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 167 bits (84), Expect = 5e-41
Identities = 132/148 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| || | | |||||| || ||||||||||| |||| |||||||| | | |||||| |||
Sbjct: 93 tttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 159 bits (80), Expect = 1e-38
Identities = 131/148 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||||| | |||||||| |||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | |||||||||| || |||||||| |||| |||||||||||| ||||| |||
Sbjct: 70 tctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 167 bits (84), Expect = 5e-41
Identities = 135/152 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| |||||| | || | |||||||||||||||||||| |||||||| |||| ||||
Sbjct: 66 tgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 126 tagaatgacttacattatgaaacggagggagt 157
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | || ||| |||| ||||||||||||| ||||| ||||||| |||| |||
Sbjct: 93 tctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 5e-41
Identities = 130/146 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||| |||||||||||||| | |||||||||||||| || ||| |||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 125 atgacttacattgtgaaatggaggga 150
|||||||||||||||||| |||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 167 bits (84), Expect = 5e-41
Identities = 130/146 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||| | |||||||||||||| | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | ||||||||||||||||||| ||||||||||||||||| |||||| |||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 125 atgacttacattgtgaaatggaggga 150
|||||||||||||||||| |||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 5e-41
Identities = 135/152 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 157 acttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| || | |||||||||||||||||||||| |||||||| | || ||||
Sbjct: 97 tgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagt 6
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||| | | |||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | | |||| |||||||||||||||||| ||||||||||| | | || |||
Sbjct: 70 tctagacatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 130 atgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 163 bits (82), Expect = 9e-40
Identities = 125/141 (88%), Gaps = 10/141 (7%)
Strand = Plus / Minus
Query: 8 ccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatct 67
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 68 agatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatg 127
|||||||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 82 --------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 128 acttacattgtgaaatggagg 148
||||||||||||||| |||||
Sbjct: 30 acttacattgtgaaacggagg 10
Score = 161 bits (81), Expect = 3e-39
Identities = 133/152 (87%), Gaps = 10/152 (6%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatgc 115
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| || ||||||
Sbjct: 116 tagaatgacttacattgtgaaacggggggagt 147
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||||
Sbjct: 157 acttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| |||||| | || | |||||||||||||||||||| |||||||||| || ||||
Sbjct: 97 tgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagt 6
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | || ||| |||| ||||||||||||| |||| ||||||| |||| |||
Sbjct: 70 tctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctaga 129
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 130 atgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| || | ||| |||||||||||||||||| |||||||| | || ||||
Sbjct: 66 tgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 126 tagaatgacttacattatgaaacggagggagt 157
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||||||| | | |||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| | | |||| |||||||||||||||||| ||||||||||| | | || |||
Sbjct: 93 tctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 157 bits (79), Expect = 5e-38
Identities = 126/144 (87%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgta 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 70 tctagata------------tagatacattaacatcaatatgaatgtgggaaatgctaga 117
Query: 125 atgacttacattgtgaaatggagg 148
||||||||||||||| || |||||
Sbjct: 118 atgacttacattgtggaacggagg 141
Score = 149 bits (75), Expect = 1e-35
Identities = 131/152 (86%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 145 acttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaa 86
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|| ||| ||| ||||||| ||||||||||||||||||||||| |||||
Sbjct: 85 tg------------tatctatatctagatacattaacatcaatatgaatgtggaaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 155 bits (78), Expect = 2e-37
Identities = 135/152 (88%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 6 acttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgttaa 58
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 59 tgaatctagatagatat--atgtctagattcattaacatcaatatgaatatgggaaatgc 116
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||| ||||||||| |||||||||
Sbjct: 117 taaaatgacttatattgtgaaacggagggagt 148
Score = 119 bits (60), Expect = 1e-26
Identities = 90/99 (90%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 144 cctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaa 85
Query: 65 tctagatagatatatatgtctagattcattaacatcaat 103
||||| | |||||| | |||||||||||||||||||||
Sbjct: 84 tctag--acatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 153 bits (77), Expect = 8e-37
Identities = 128/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||| |||||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 151 cctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | |||||||||||| |||||||||||||| | |||||||||||||||| | |
Sbjct: 91 tcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaa 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
Score = 145 bits (73), Expect = 2e-34
Identities = 133/152 (87%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||| || | ||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 66 tgaatcaag--acatatatatgcatagattcattaacatctatatgaatgtgaaaaatgc 123
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| |||||||| |||| ||||| |||||||||
Sbjct: 124 taaaatgacttgcattatgaaacggagggagt 155
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||| || ||| || ||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| | | |||||| ||||||||||| |||| ||||||||||||| ||||
Sbjct: 66 tgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||| ||||| |||||||||
Sbjct: 126 taaaatgacttacattatgaaacggagggagt 157
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||| ||||||| |||||||||||| |||| |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | || | ||| |||||||||||||||||| ||||| || |||| || | |||
Sbjct: 93 tctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 151 bits (76), Expect = 3e-36
Identities = 128/147 (87%), Gaps = 15/147 (10%)
Strand = Plus / Minus
Query: 6 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 65
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattttc-------atattgatgttaatgaat 85
Query: 66 ctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaa 125
||||||| ||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 ctagata--------tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Query: 126 tgacttacattgtgaaatggagggagt 152
||||||||||||||||| |||| ||||
Sbjct: 32 tgacttacattgtgaaacggagagagt 6
Score = 111 bits (56), Expect = 3e-24
Identities = 123/147 (83%), Gaps = 15/147 (10%)
Strand = Plus / Plus
Query: 6 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 65
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 66 ctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaa 125
| || | || ||||||||||||||||||||||||| ||||| ||||
Sbjct: 71 c--------taaacatatctagattcattaacatcaatatga-------aaatgctagaa 115
Query: 126 tgacttacattgtgaaatggagggagt 152
||||||||||||||||| |||| ||||
Sbjct: 116 tgacttacattgtgaaacggagagagt 142
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 151 bits (76), Expect = 3e-36
Identities = 131/152 (86%), Gaps = 13/152 (8%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 144 acttcctccgttttacaatgtaagtcattctagcatttcccacattcata---------- 95
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 94 ---atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagatt 90
|||||| | |||||| | ||||||||
Sbjct: 70 tctagacatatatatctatctagatt 95
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||| |||||| ||| |||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||| |||||||||||||||||||| |||||||| || | ||||
Sbjct: 66 tgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||| ||||| |||||||||
Sbjct: 126 tagaaagtcttacattatgaaacggagggagt 157
Score = 143 bits (72), Expect = 8e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| || |||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||||||||||||||||||||||||||| ||||||||||||| ||| |||
Sbjct: 93 tctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| |||||||||| ||||| |||||
Sbjct: 33 aagacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 149 bits (75), Expect = 1e-35
Identities = 133/152 (87%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| | || | ||| |||||||||||||||||||||||| ||||||
Sbjct: 66 tgaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaatgc 116
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| ||||||||
Sbjct: 117 tagaatgacttacattgtgaaaccgagggagt 148
Score = 111 bits (56), Expect = 3e-24
Identities = 123/147 (83%), Gaps = 15/147 (10%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 144 cctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
Query: 65 tctagatagatatatatgtc---tagattcattaacatcaatatgaatgtgggaaatgta 121
| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 84 ac------------tatgtcacatagattcattaacatcaatatgaatgtggaaaatgct 37
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||| ||||| |||||
Sbjct: 36 agaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | | |||||||| ||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | |||||| |||||||||||||||||| || |||||||||| ||||| | |
Sbjct: 70 tctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaa 129
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagt 157
Score = 135 bits (68), Expect = 2e-31
Identities = 128/148 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | || || |||| ||||||||| || ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||||| |||| | |||||||||||||||||||| ||||||||||| | |||| ||
Sbjct: 93 tctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctagg 34
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 157 acttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||| | |||||||||||||||||||| ||||||||||| | ||||
Sbjct: 97 tgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| || | |||||||| ||||| |||||||||
Sbjct: 37 taaaaagtcttacattatgaaacggagggagt 6
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | || ||||||| ||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | |||||| |||||||||||||||||| ||||||||||||| |||| |||
Sbjct: 70 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 129
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 130 aagtcttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||| | |||||||||||||||||||| ||||||||||| | ||||
Sbjct: 66 tgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| || | |||||||| ||||| |||||||||
Sbjct: 126 taaaaagtcttacattatgaaacggagggagt 157
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | || ||||||| ||||||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | | |||||| |||||||||||||||||| ||||||||||||| |||| |||
Sbjct: 93 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 141 bits (71), Expect = 3e-33
Identities = 130/152 (85%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||| |||||| |||||||||||||||||| | | |||||||||||||||||
Sbjct: 145 acttcctccgttccacaatataagtcattctagcatttactatattcatattgatgttaa 86
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 85 tgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatgg 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||| ||||| |||||||||
Sbjct: 37 taaaatgacttacattatgaaacggagggagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 120/144 (83%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| ||||||||||||||||||||||||||| | | ||||| |||
Sbjct: 70 tctaga------------tctagattcattaacatcaatatgaatatagtaaatgctaga 117
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| |||||| || |||||
Sbjct: 118 atgacttatattgtggaacggagg 141
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 141 bits (71), Expect = 3e-33
Identities = 130/152 (85%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||| |||||| |||||||||||||||||| | | |||||||||||||||||
Sbjct: 6 acttcctccgttccacaatataagtcattctagcatttactatattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatgg 113
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||| ||||| |||||||||
Sbjct: 114 taaaatgacttacattatgaaacggagggagt 145
Score = 109 bits (55), Expect = 1e-23
Identities = 120/144 (83%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 141 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| ||||||||||||||||||||||||||| | | ||||| |||
Sbjct: 81 tctaga------------tctagattcattaacatcaatatgaatatagtaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| |||||| || |||||
Sbjct: 33 atgacttatattgtggaacggagg 10
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 139 bits (70), Expect = 1e-32
Identities = 131/152 (86%), Gaps = 7/152 (4%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||
Sbjct: 150 acttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaa 91
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||| || || ||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 90 tgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaataa 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggagggagt 6
Score = 115 bits (58), Expect = 2e-25
Identities = 122/144 (84%), Gaps = 7/144 (4%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||| || || || || ||||||||||||||||| |||||||||||| |||
Sbjct: 70 actacatctattta-------agtttcattaacatcaatataaatgtgggaaatactaga 122
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 123 atgacttacattgtgaaacggagg 146
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 137 bits (69), Expect = 5e-32
Identities = 119/138 (86%), Gaps = 12/138 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 81 tctaca------------tctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaa 142
||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaa 16
Score = 133 bits (67), Expect = 8e-31
Identities = 129/152 (84%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6 acttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||||||||| |||||||| ||| ||| |||||
Sbjct: 66 tgaatctaga------------tgtagattcattaatatcaatataaatatggaaaatgc 113
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 114 tagaatgacttacattgtgaaacggagggagt 145
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| |||||| ||||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| | | ||| |||||||||||||||||| |||| | |||||| |||| ||||
Sbjct: 66 tgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| ||| |||||| | |||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | || ||| ||| ||||||||||||||| ||||| ||||||| |||| |||
Sbjct: 93 tctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 135 bits (68), Expect = 2e-31
Identities = 129/152 (84%), Gaps = 13/152 (8%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
| ||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 66 taaatctag-------------tctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagt 144
Score = 135 bits (68), Expect = 2e-31
Identities = 123/144 (85%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 81
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| ||||||| |||||||||||||| |||||| |||||| |||
Sbjct: 80 tctaga-------------ctagatttattaacatcaatataaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||| ||||| |||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| |||| || ||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||| ||| | ||||||||||||||||||| | | ||||||||||| |||| |||
Sbjct: 93 tctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| |||||||||| | | ||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | | ||||| | |||||||||||||||| ||||| || ||| ||||
Sbjct: 66 tgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | || ||||||| |||||||||||| |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
| |||||| ||| ||| |||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 66 taaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatgt 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | ||||| |||| |||||||||||| |||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||||| | |||||| |||| |||| ||||||||||||| |||| | |
Sbjct: 93 tctagacattattatatatatagatttattagcatctatatgaatgtgggtaatgctata 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 131 bits (66), Expect = 3e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 66 tgaatctaga 75
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 137 gtgaaatggagg 148
|||||| |||||
Sbjct: 21 gtgaaacggagg 10
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 131 bits (66), Expect = 3e-30
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 26 cattctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtct 85
|||||||||||||||||||||||||| | |||||||||||||||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 86 agattcattaacatcaatatgaatgtgggaaatgtaagaatg 127
||||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 115 bits (58), Expect = 2e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 26 cattctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtct 85
||||||| ||||| |||||||||||| | |||||||||||||||||| ||||| ||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 86 agattcattaacatcaatatgaatgtgggaaatg 119
||||||||||||| | |||||||||||| |||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatg 9
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 131 bits (66), Expect = 3e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 143 tggagggagt 152
|||||||||
Sbjct: 15 cggagggagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacatt 46
||||||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 133 acttcctccgtttcataatggaagtcattctaacatttcccacatt 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 107 aatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||| |||||||||| |||| ||||| |||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggagg 129
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 118/138 (85%), Gaps = 12/138 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| || ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 81 tctacat------------ctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaa 142
||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaa 16
Score = 125 bits (63), Expect = 2e-28
Identities = 128/152 (84%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6 acttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||||||||| |||||||| ||| ||| |||||
Sbjct: 66 tgaatctaga------------tgtagattcattaatatcaatataaatatggaaaatgc 113
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||||||||||||| |||||||||
Sbjct: 114 tataatgacttacattgtgaaacggagggagt 145
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 124/148 (83%), Gaps = 18/148 (12%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 139 acttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatgt--- 83
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ---------------atatatgtctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
Score = 123 bits (62), Expect = 7e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 130/152 (85%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| |||||| | ||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| ||| |||||| ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 66 tgaatttag------atatatctctagattcattagcatcaatataaatgtggaaaatgc 119
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| ||||||||| ||||||||| |||||||||
Sbjct: 120 taaaatgacttatattgtgaaacggagggagt 151
Score = 127 bits (64), Expect = 5e-29
Identities = 125/144 (86%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||
Sbjct: 147 cctccgtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaa 88
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| ||||||| |||| |||||||| ||||||| | |||||| |||||| | |
Sbjct: 87 tctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 129 bits (65), Expect = 1e-29
Identities = 128/152 (84%), Gaps = 14/152 (9%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 143 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttca 84
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
| |||||||| | |||||| |||||||||||||||||||||||||
Sbjct: 83 taaatctaga--------------caaattcatgaacatcaatatgaatgtgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||||| |||||||||||||| |||||||||
Sbjct: 37 tagaatggcttacattgtgaaacggagggagt 6
Score = 121 bits (61), Expect = 3e-27
Identities = 121/144 (84%), Gaps = 14/144 (9%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttcatga- 68
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|| |||||||||| || ||||||||||||||||||||||||| |||
Sbjct: 69 -------------atttgtctagatttatgaacatcaatatgaatgtgggaaatgctaga 115
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 116 atgacttacattgtgaaacggagg 139
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 101/113 (89%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | |||||||||| || |||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgg 113
|||||||||| | |||| | ||| |||||||||||||||| ||||||||||||
Sbjct: 66 tgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtgg 118
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||| || ||||||||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | | ||||||||||||||||||||||||| |||||||||| | |||| |||
Sbjct: 93 tctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 127/152 (83%), Gaps = 18/152 (11%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 139 acttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaa 80
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 79 tgaatct------------------agattcattaacatcaatatgaatatgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 117 bits (59), Expect = 5e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 65 tctagat 71
|||||||
Sbjct: 70 tctagat 76
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 127/152 (83%), Gaps = 18/152 (11%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 66 t------------------atgtatagattcattaacatcaatatgaatgtgggaaatgc 107
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 108 tagaatgacttatattgtgaaacggagggagt 139
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Query: 65 tcta 68
||||
Sbjct: 75 tcta 72
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 131 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 72
Query: 65 tctagatagatat 77
|||||||||||||
Sbjct: 71 tctagatagatat 59
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 143 tggagggagt 152
|||||||||
Sbjct: 126 cggagggagt 135
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 127 bits (64), Expect = 5e-29
Identities = 127/152 (83%), Gaps = 17/152 (11%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 66 tgaatc-----------------attgattcattaacatcaatatgaatgtgagaaatgc 108
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||| ||||||||||||| |||||||||
Sbjct: 109 tagaatgaattacattgtgaaacggagggagt 140
Score = 111 bits (56), Expect = 3e-24
Identities = 119/144 (82%), Gaps = 17/144 (11%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 136 cctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaa 77
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|| | ||||||||||||||||||||||||||||||||| |||
Sbjct: 76 tcaat-----------------gattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||| | | ||| |||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||| | ||||||||||||||||||||||||| ||||||||||||| ||| |||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagt 157
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||| ||| |||||||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||| |||||| ||||||||||||| |||||||| |||| | | |||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | |||||||||| ||||||||| || |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | ||||| | | |||||||||||||||| ||||||||| ||| ||||
Sbjct: 66 tgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| || ||||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||| ||||| ||||||||||||||| |||| || |||||||||| |||| |||
Sbjct: 93 tctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 33 aagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||| ||| |||| | ||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||| ||| ||||||||||||||||||||||| | |||||| |||| |||| |||
Sbjct: 93 tctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| ||| |||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | || ||| | | |||||||||||||||| ||||| | ||||| |||
Sbjct: 66 tgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatac 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 125 bits (63), Expect = 2e-28
Identities = 78/83 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaa 70
Query: 61 tgaatctagatagatatatatgt 83
|||||||||||||||||| ||||
Sbjct: 69 tgaatctagatagatataaatgt 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||||| | ||| ||||| | |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 143 tggagg 148
|||||
Sbjct: 120 cggagg 125
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||| ||||||||||||||| ||| |||| ||||||| ||||
Sbjct: 10 cctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||| |||||||||||| | ||||||||||||||| ||| |||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagt 6
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 129/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 3 ttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatg 62
||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 63 aatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaa 122
||||| | | |||||| || |||||||||||| ||| ||| ||||||||| ||| |
Sbjct: 68 aatctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 123 gaatgacttacattgtgaaatggagggagt 152
|||||||||| ||||||||| |||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagt 155
Score = 113 bits (57), Expect = 7e-25
Identities = 123/144 (85%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| ||||||||||||| ||| |||||||| ||| ||| |||||||
Sbjct: 151 cctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| | ||||||||| ||||||||||||||| ||||||||||||| |||| |||
Sbjct: 91 tctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||| ||| ||||| |||||
Sbjct: 33 atgacttatattatgaaacggagg 10
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaa 65
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 66 tgaatctaga 75
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 141 aatggagg 148
|| |||||
Sbjct: 17 aacggagg 10
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 58
||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 130 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 95 aacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 134
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 7e-28
Identities = 128/152 (84%), Gaps = 16/152 (10%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||
Sbjct: 141 acttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaa 82
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|| ||||| ||||||||||||| ||||||||||||||| ||||||
Sbjct: 81 tg----------gatat------ctagattcattaatatcaatatgaatgtgagaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaa 69
Query: 65 tctagata 72
||||||||
Sbjct: 70 tctagata 77
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 123 bits (62), Expect = 7e-28
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 133 acttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaa 74
Query: 61 tgaatctagatagatatatatg 82
||||||||||| |||||||||
Sbjct: 73 tgaatctagatgaatatatatg 52
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||| ||||||||| ||| ||||| |||| ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 143 tggagg 148
|||||
Sbjct: 124 cggagg 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| ||||||||||||||| ||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagt 6
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 126/152 (82%), Gaps = 18/152 (11%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta- 64
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 65 -----------------atatgtatagattcattaacatcaatatgaatgtggaaaatgc 107
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||||| |||||||||
Sbjct: 108 tagaatgacttatattgtgaaacggagggagt 139
Score = 119 bits (60), Expect = 1e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Query: 65 tcta 68
||||
Sbjct: 75 tcta 72
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaa 65
Query: 61 tgaatctagatag 73
||||| |||||||
Sbjct: 66 tgaatgtagatag 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 143 tggagg 148
|||||
Sbjct: 15 cggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
||||||||||| ||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 121 bits (61), Expect = 3e-27
Identities = 130/152 (85%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 155 acttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaa 96
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | ||||| |||||||||||||||||||||||||| | || ||||
Sbjct: 95 tgaatctagacacgcatata--cctagattcattaacatcaatatgaatataggcaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||| ||||| |||||||||
Sbjct: 37 tagaaagtcttacattatgaaacggagggagt 6
Score = 97.6 bits (49), Expect = 4e-20
Identities = 121/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| | | |||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| | |||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 70 tctaggt--atatgcgtgtctagattcattaacatttatatgaatgtggacaatgctaga 127
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||| ||||| |||||
Sbjct: 128 aagtcttacattatgaaacggagg 151
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 121 bits (61), Expect = 3e-27
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaa 65
Query: 61 tgaat 65
|||||
Sbjct: 66 tgaat 70
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 6 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
|||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
|||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||| ||| ||||| ||||||||||||||| ||||| |||| ||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagt 128
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaa 70
Query: 61 tgaatctagatagatat 77
|||||||||||||||||
Sbjct: 69 tgaatctagatagatat 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 143 tggagg 148
|||||
Sbjct: 120 cggagg 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 10 cctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||| ||||||||||||||||| ||| |||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagt 6
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 126 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaa 67
Query: 61 tgaatctagatag 73
|||||||||||||
Sbjct: 66 tgaatctagatag 54
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 143 tggagg 148
|||||
Sbjct: 117 cggagg 122
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattt 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 129 acttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaa 70
Query: 61 tgaatctagatagatat 77
|||||||||||||||||
Sbjct: 69 tgaatctagatagatat 53
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 143 tggagg 148
|||||
Sbjct: 120 cggagg 125
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagt 6
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | || ||| ||| ||||||||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | || ||||| ||||| |||||||||||| |||||||| |||| ||| |||
Sbjct: 93 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||| ||| ||||| |||||||||
Sbjct: 33 aagtcttatattatgaaacggagggagt 6
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||| |||| | |||||| ||| ||| |||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||| ||| ||||||||||||||||||||||| |||||||||||| ||| | |
Sbjct: 70 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 129
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 119 bits (60), Expect = 1e-26
Identities = 127/152 (83%), Gaps = 13/152 (8%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat----- 60
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| || | |||||||| |||||||||||||| ||| || ||||||
Sbjct: 61 --------gatagatagatctatctagatttattaacatcaatataaatatgagaaatgc 112
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagt 144
Score = 103 bits (52), Expect = 7e-22
Identities = 119/144 (82%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaa 81
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||||||| ||| || ||||||||||||||||||||||| | |
Sbjct: 80 tctagatagatctat-------------ctatcatcaatatgaatgtgggaaatgctaaa 34
Query: 125 atgacttacattgtgaaatggagg 148
|||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 114 acttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaa 55
Query: 61 tgaatctagata 72
||||||||||||
Sbjct: 54 tgaatctagata 43
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 78 atatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattg 137
|||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 138 tgaaatggagg 148
||||| |||||
Sbjct: 100 tgaaacggagg 110
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcat 36
||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcat 41
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||| |||| | |||||| ||| ||| |||||||| ||||||||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||||| ||| ||||||||||||||||||||||| |||||||||||| ||| | |
Sbjct: 93 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 34
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagt 6
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | || ||| ||| ||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | || ||||| ||||| |||||||||||| |||||||| |||| ||| |||
Sbjct: 70 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||| ||| ||||| |||||||||
Sbjct: 130 aagtcttatattatgaaacggagggagt 157
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 133 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaa 74
Query: 61 tgaatctagata 72
|||||| |||||
Sbjct: 73 tgaatcaagata 62
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 87 gattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatgga 146
||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 147 gg 148
||
Sbjct: 128 gg 129
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagt 6
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||| ||| | |||||||||| |||||||||| | ||||||||
Sbjct: 6 acttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| | | ||||||||||||||||||||||||||| || | | | || |||||
Sbjct: 66 tgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatgt 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
Score = 79.8 bits (40), Expect = 1e-14
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 53 gatgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtg 112
|||||||||||||||||| | |||||| ||| |||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 113 ggaaatgtaagaatgacttacattgtgaaatggagg 148
|| |||| |||| | ||| |||| ||||| |||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaacggagg 10
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaa 69
Query: 65 tctagata 72
||||||||
Sbjct: 70 tctagata 77
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 143 tggagggagt 152
|||||||||
Sbjct: 15 cggagggagt 6
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||
Sbjct: 137 acttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgttaa 78
Query: 61 t 61
|
Sbjct: 77 t 77
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 117 bits (59), Expect = 5e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaa 65
Query: 61 tgaatct 67
|||||||
Sbjct: 66 tgaatct 72
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaat 61
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 132 cctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 75
Query: 65 tctaga 70
||||||
Sbjct: 74 tctaga 69
Score = 113 bits (57), Expect = 7e-25
Identities = 126/152 (82%), Gaps = 19/152 (12%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gttaa 59
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 tgaatct-------------tgtctagattcattaacatcaatatgaatatgggaaatgc 106
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 107 tagaatgacttacattgtgaaacggagggagt 138
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 128 acttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaa 69
Query: 61 tgaatctaga 70
|| |||||||
Sbjct: 68 tggatctaga 59
Score = 113 bits (57), Expect = 7e-25
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 57 ttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaa 116
|||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 35 ttaatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgggaa 92
Query: 117 atgtaagaatgacttacattgtgaaatggagg 148
||| ||||||||||||||| ||||| |||||
Sbjct: 93 atgctagaatgacttacattatgaaacggagg 124
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 97/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaat 109
||||||||| | | | ||||||||||||||||||||||| | ||||||
Sbjct: 66 tgaatctag--acacacatatgtctagattcattaacatctagatgaat 112
Score = 97.6 bits (49), Expect = 4e-20
Identities = 121/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | || ||||||| | |||||| | ||||||||||||
Sbjct: 151 cctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgttaatgaa 92
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||| | |||||||||||||||||||| ||||||||||||| |||| |||
Sbjct: 91 tctagaca--tatgtgtgtctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| |||||||||| ||||| |||||
Sbjct: 33 aagacttacattatgaaacggagg 10
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaa 69
Query: 65 tctagatagatata 78
|||| |||||||||
Sbjct: 70 tctatatagatata 83
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
||||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagt 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcat 28
||||||||||||||||||||||||
Sbjct: 121 cctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
Score = 113 bits (57), Expect = 7e-25
Identities = 126/152 (82%), Gaps = 19/152 (12%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||
Sbjct: 138 acttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gttaa 85
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 84 tgaatct-------------tgtctagattcattaacatcaatatgaatatgggaaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 143 tggagggagt 152
|||||||||
Sbjct: 125 cggagggagt 134
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 130 cctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaa 71
Query: 65 tctagata 72
||||||||
Sbjct: 70 tctagata 63
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 94 taacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 134 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaa 75
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 74 tgaatctaga 65
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 75 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttaca 134
|||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 135 ttgtgaaatggagg 148
|||||||| |||||
Sbjct: 117 ttgtgaaacggagg 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10 cctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 acttcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaa 79
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 78 tgaatctaga 69
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 137 gtgaaatggagg 148
||||| |||||
Sbjct: 123 atgaaacggagg 134
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaa 65
Query: 61 tgaatctag 69
|||||||||
Sbjct: 66 tgaatctag 74
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 84 ctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaat 143
|||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 144 ggagg 148
|||||
Sbjct: 14 ggagg 10
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 125 cctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaa 66
Query: 65 tctagatagatat 77
|||||||| ||||
Sbjct: 65 tctagatatatat 53
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 76 atatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacat 135
|||||| ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 136 tgtgaaatggagggagt 152
|||||| |||||||||
Sbjct: 113 ggtgaaacggagggagt 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||||||||||||||| |||||| | |||||||| || ||||||||
Sbjct: 10 cctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 113 bits (57), Expect = 7e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 113 acttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaa 54
Query: 61 tgaat 65
|||||
Sbjct: 53 tgaat 49
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 148 g 148
|
Sbjct: 109 g 109
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcat 49
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 104 atgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 142 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaa 83
Query: 61 tgaatctag 69
|||||||||
Sbjct: 82 tgaatctag 74
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 84 ctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaat 143
|||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 144 ggagg 148
|||||
Sbjct: 134 ggagg 138
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 113 bits (57), Expect = 7e-25
Identities = 126/152 (82%), Gaps = 14/152 (9%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta- 64
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 65 -------------atatatatatctagatttattaacatcactatgaatgtgggaaatac 111
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| ||||||||
Sbjct: 112 tagaatgacttacattatgaaacagagggagt 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| |||||| ||||||||||||||||| |||| ||||||||||| |||||||||| ||
Sbjct: 139 cctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaa 80
Query: 65 tctagatagatatat 79
|||||||| ||||||
Sbjct: 79 tctagatatatatat 65
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 7e-25
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | || ||||||| |||||||| || | ||| ||||
Sbjct: 155 acttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatattaa 96
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||| || ||| | |||||||||||||||||| |||| |||||| ||||
Sbjct: 95 tgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatgg 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||| ||||| |||||||||
Sbjct: 37 tagaaagtcttacattatgaaacggagggagt 6
Score = 89.7 bits (45), Expect = 1e-17
Identities = 120/144 (83%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | ||||| |||| ||||||| |||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctaccattgtccacat--atatagatgttaatgaa 67
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||| |||| |||||||||||||| ||| | || ||||||| |||| | |
Sbjct: 68 tctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatgctaaa 127
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 128 aagtcttacattgtgaaacggagg 151
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 118 cctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaa 59
Query: 65 tctagata 72
||||||||
Sbjct: 58 tctagata 51
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 143 tggagggagt 152
|||||||||
Sbjct: 113 cggagggagt 122
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttcca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttcca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 125/148 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||| ||||||| | |||||| | | ||| |||||||| ||||||||||||
Sbjct: 10 cctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||| | ||||||||||||||||||||||||| |||||||| |||| ||| |||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaatactaga 129
Query: 125 atgacttacattgtgaaatggagggagt 152
| | |||||||||||||| |||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagt 157
Score = 103 bits (52), Expect = 7e-22
Identities = 124/148 (83%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||| ||| ||| |||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | |||| |||||| ||||||||||||| |||||||| |||| | | |||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
| | ||||||| |||||| |||||||||
Sbjct: 33 aagtcttacatggtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaa 69
Query: 65 tcta 68
||||
Sbjct: 70 tcta 73
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 119 cctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 123
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | || ||||||| ||| |||||| | ||||||||
Sbjct: 157 acttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | || ||| ||| ||||||||||||| || ||||| || || | ||||
Sbjct: 97 tgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 37 tagaaagtcttacattgtgaaacggagggagt 6
Score = 103 bits (52), Expect = 7e-22
Identities = 121/144 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| || || ||||| || |||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | ||| ||||||||||||||||||||||| | |||||| |||| |||| | |
Sbjct: 70 tctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaa 129
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 130 aagtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaa 75
Query: 65 tctagatagata 76
|||| |||||||
Sbjct: 74 tctatatagata 63
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
|||||| |||||||||||||| | ||||| ||||| ||||||||||||||||||||| |
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 145 gagggagt 152
||||||||
Sbjct: 131 gagggagt 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||| ||||||||||||||||||| ||||||||| |||| | ||||||||
Sbjct: 10 cctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 125/148 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| |||||| ||||||||||||| ||||||||| |||||||| | ||||||| ||||
Sbjct: 153 cctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| | ||||| || |||||||| ||||||| |||| ||| || |||||| |||
Sbjct: 93 tctagacatatatacatacttagattcactaacatctatatcaatatgagaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 33 atgacttacattatgaaacggagggagt 6
Score = 111 bits (56), Expect = 3e-24
Identities = 125/148 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| || ||| |||| ||||||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| || |||||||||||||||||| ||||||| | |||||||| ||||| | |
Sbjct: 70 tctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctaca 129
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| ||||||||
Sbjct: 130 atgacttacattatgaaacagagggagt 157
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||
Sbjct: 131 acttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaa 72
Query: 61 tgaatcta 68
||||||||
Sbjct: 71 tgaatcta 64
Score = 107 bits (54), Expect = 4e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 80 atgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtg 139
|||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 140 aaatggagg 148
||| |||||
Sbjct: 119 aaacggagg 127
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 95 aacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 125 cctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 66
Query: 65 tcta 68
||||
Sbjct: 65 tcta 62
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 145 gagggagt 152
||||||||
Sbjct: 122 gagggagt 129
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 acttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgttaa 61
Query: 61 t 61
|
Sbjct: 62 t 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 92 attaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||||||| ||||| | ||||||||| |||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaa 12
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgaa 64
||||
Sbjct: 66 tgaa 69
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 89 ttcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 111 bits (56), Expect = 3e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| |||||||||||| ||||||||||||||||||| |||||| || ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
||||||||||||| ||||||||||||| ||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatg 100
Score = 103 bits (52), Expect = 7e-22
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| |||||||||||| ||||||||||||||||| | |||||||| |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
|||||||||||| ||||||||||||| ||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatg 15
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 129 acttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaa 70
Query: 61 tgaatcta 68
||||||||
Sbjct: 69 tgaatcta 62
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||| || ||||||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| |
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 145 gagg 148
||||
Sbjct: 122 gagg 125
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | || ||| ||| | ||||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| | | || |||||||||||||| ||||||||| | ||| ||||||| ||||
Sbjct: 66 tgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||||||||| |||||||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagggagt 157
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| |||||| ||| | ||||||||| ||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatg 110
|||||| | ||| |||||| |||||||||||||||| | |||||||
Sbjct: 93 tctagacatatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 109 bits (55), Expect = 1e-23
Identities = 123/148 (83%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||| ||||| |||||||||| ||||| ||||||||| |||||||
Sbjct: 141 cctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||| ||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 81 tttaga------------tctagattcattagcatcaatatgaatgtgaaaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|| ||||||||||||||| |||||||||
Sbjct: 33 ataacttacattgtgaaacggagggagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaa 69
Query: 65 tctagat 71
|||||||
Sbjct: 70 tctagat 76
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 109 bits (55), Expect = 1e-23
Identities = 121/148 (81%), Gaps = 20/148 (13%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 133 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 74
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|| ||||||||| ||||||||||||||||||||||| |||
Sbjct: 73 tc--------------------gattcattagcatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 121/148 (81%), Gaps = 20/148 (13%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|| ||||||||| ||||||||||||||||||||||| |||
Sbjct: 70 tc--------------------gattcattagcatcaatatgaatgtgggaaatgctaga 109
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||| ||||| |||||||||
Sbjct: 110 atgacttacattatgaaacggagggagt 137
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 109 bits (55), Expect = 1e-23
Identities = 123/148 (83%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||
Sbjct: 141 cctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaa 82
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
| |||| ||||||||||||| ||||||||| ||| || |||| |||
Sbjct: 81 tttaga------------tctagattcattagcatcaatataaatatgaaaaatactaga 34
Query: 125 atgacttacattgtgaaatggagggagt 152
|||||||||||||||||| |||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 123/148 (83%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||||||| ||||| || ||| ||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||||| |||| |||||||| ||||||||||||||| | ||||| |||
Sbjct: 70 tctaga------------tctaaattcattagcatcaatatgaatgtagaaaatgctaga 117
Query: 125 atgacttacattgtgaaatggagggagt 152
|||| ||||||||||||| |||||||||
Sbjct: 118 atgatttacattgtgaaacggagggagt 145
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatga 63
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggaggg 149
|||||||||||||||||||||||| ||||| | ||||||||||||||||||| ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 59
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 123 cctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 94 taacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||||| ||||| | ||| | ||||||||||||| |||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagt 127
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 109 bits (55), Expect = 1e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||||||| |||| || ||| ||||||||| |||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataa 65
Query: 61 tgaatctagatagatatatatgt 83
|||||||||||||||||||||||
Sbjct: 66 tgaatctagatagatatatatgt 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
|||||| | ||||||||||||| ||||||||| ||| || ||||| |||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 134 attgtgaaatggagg 148
||||||||| |||||
Sbjct: 24 attgtgaaacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattt 38
||||||||||| ||||||||||||| ||||||||
Sbjct: 123 cctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 70
Query: 61 tga 63
|||
Sbjct: 69 tga 67
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 93 ttaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 125
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaa 65
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 66 tgaatctaga 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 76 atatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacat 135
|||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 136 tgtgaaatggagg 148
| ||||| |||||
Sbjct: 22 tatgaaacggagg 10
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagt 129
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||| ||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 125 cctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 107 bits (54), Expect = 4e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 58
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 130 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 103 bits (52), Expect = 7e-22
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaa 68
Query: 65 tcta 68
||||
Sbjct: 69 tcta 72
Score = 81.8 bits (41), Expect = 2e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 80 atgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtg 139
|||| ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 140 aaatggagggagt 152
||| |||||||||
Sbjct: 18 aaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 95 aacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 126
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||| |||
Sbjct: 6 acttcctctgtttcataatataagtcattctagcattttccacattcatactgatgctaa 65
Query: 61 tgaatctagatag 73
|||||||||||||
Sbjct: 66 tgaatctagatag 78
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||| ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 133 cctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| ||||| ||||||||||| ||||| ||||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||
Sbjct: 125 acttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaa 66
Query: 61 tgaat 65
|||||
Sbjct: 65 tgaat 61
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 148 g 148
|
Sbjct: 121 g 121
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaa 69
Query: 65 tctagatagatat 77
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 135 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||| ||| ||||| |||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 143 tggagggagt 152
|||||||||
Sbjct: 15 cggagggagt 6
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 105 bits (53), Expect = 2e-22
Identities = 63/65 (96%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgttaa 64
Query: 61 tgaat 65
|||||
Sbjct: 65 tgaat 69
Score = 73.8 bits (37), Expect = 6e-13
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcat 49
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcatttt-cacattcat 64
Score = 65.9 bits (33), Expect = 1e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 122 agaatgacttacattgtgaaatggaggg 149
||||||||||||||||||||| ||||||
Sbjct: 81 agaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaa 65
Query: 61 tgaat 65
|||||
Sbjct: 66 tgaat 70
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 125 cctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||| ||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagt 129
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaa 65
Query: 61 t 61
|
Sbjct: 66 t 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 79 tatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgt 138
||||| || ||| |||||||||||||||||||||| |||| | |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 139 gaaatggagg 148
|||| |||||
Sbjct: 19 gaaacggagg 10
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 130 acttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaa 71
Query: 61 tgaat 65
|||||
Sbjct: 70 tgaat 66
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
|||||||||||||||||| || ||| ||||| ||||||||||||||||||||| ||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 148 g 148
|
Sbjct: 126 g 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttc 40
||||||||||||||||||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttc 45
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 124 aatgacttacattgtgaaatggagggagt 152
||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 40 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacat 99
|||||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacat 80
Query: 100 caatatgaatgtg 112
| |||||||||||
Sbjct: 81 ctatatgaatgtg 93
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 41 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatc 100
||||||||||| ||||| |||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 101 aatatgaatgtggg 114
|||||||||||||
Sbjct: 33 tatatgaatgtggg 20
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 124/148 (83%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| ||||| ||||| ||||||||
Sbjct: 157 acttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||| | | || ||||||||| ||||||||||||| | |||||||| || ||| |
Sbjct: 97 tgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaatat 38
Query: 121 aagaatgacttacattgtgaaatggagg 148
| || | |||||||||| ||| |||||
Sbjct: 37 taaaaagtcttacattgtaaaacggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 121/148 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||| |||||||||| | || || ||| | |||||||| | ||||||||
Sbjct: 6 acttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||| |||| | || || ||| |||||||||||||||| ||||| ||||| | ||||
Sbjct: 66 tgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagg 148
|||| | |||||||||||||| |||||
Sbjct: 126 tagaaagtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 68
Query: 65 tctagata 72
||||||||
Sbjct: 67 tctagata 60
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 143 tggagggagt 152
|||||||||
Sbjct: 122 cggagggagt 131
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| | | |||| | |||||||||| |||||||||||| |||| |||
Sbjct: 157 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgctaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||||| ||| ||| |||||||||||| |||||| |||||| ||||
Sbjct: 97 tgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgc 38
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||| | | ||||| |||||||||
Sbjct: 37 tagaaagtcttataatatgaaacggagggagt 6
Score = 101 bits (51), Expect = 3e-21
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | |||||||||| ||||| |||||| ||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 119
||| | | |||||||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 70 cctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||| |||||||| | ||||||| || |||||||||||| |||||||
Sbjct: 6 acttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | | |||||||| |||||||||| | ||| ||||||||||||| ||||
Sbjct: 66 tgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| || | |||||||| ||||| ||||||||
Sbjct: 126 taaaaagtcttacattatgaaaccgagggagt 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| |||||| |||||||| | || ||||||| |||||||||||| ||| | ||||||
Sbjct: 153 cctcggtttcataatgtaagactttttagcattgcccacattcatatagatatcaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtggg 114
|||| | | |||| | ||||||||||||||||||| |||||||||||||
Sbjct: 93 tctaaacatatatgtgtgtctagattcattaacatatatatgaatgtggg 44
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 103 bits (52), Expect = 7e-22
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 30 ctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagat 89
||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatata---atctagat 57
Query: 90 tcattaacatcaatatgaatgtgggaaatg 119
||||||| ||||||||||| ||||||||||
Sbjct: 58 tcattaatatcaatatgaacgtgggaaatg 87
Score = 95.6 bits (48), Expect = 2e-19
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 30 ctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagat 89
||||||||| |||| ||||||||||| ||||||||||||||| ||||| | |||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagat---tatatctatctagat 35
Query: 90 tcattaacatcaatatgaatgtgggaaatg 119
||||||| ||||||||||| ||||||||||
Sbjct: 34 tcattaatatcaatatgaacgtgggaaatg 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 69
Query: 65 tctagata 72
||||||||
Sbjct: 70 tctagata 77
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 131 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 143 tggagggagt 152
|||||||||
Sbjct: 15 cggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 127
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
|||| |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 118 cctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagt 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||||||| || || | ||||||||||||| ||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 134 attgtgaaatggagg 148
||| |||||||||||
Sbjct: 113 attatgaaatggagg 127
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 131 acttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaa 72
Query: 61 tgaatctagatagatatat 79
|||||||||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcatt 37
||||||||||| |||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||||||||||| ||||| |||||||||
Sbjct: 36 agaatgacttacattatgaaacggagggagt 6
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 101 bits (51), Expect = 3e-21
Identities = 80/90 (88%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 30 ctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagat 89
||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacagat------gtctagat 35
Query: 90 tcattaacatcaatatgaatgtgggaaatg 119
||||| ||||||||||||||||||||||||
Sbjct: 34 tcattgacatcaatatgaatgtgggaaatg 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 75/86 (87%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 34 cattttccacattcatattgatgttaatgaatctagatagatatatatgtctagattcat 93
||||| |||||||||||||||||| |||||||||||| | | |||||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagaca------tctgtctagattcat 58
Query: 94 taacatcaatatgaatgtgggaaatg 119
| ||||||||||||||||||||||||
Sbjct: 59 tgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||
Sbjct: 134 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaa 75
Query: 61 tgaatct 67
|||||||
Sbjct: 74 tgaatct 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatga 63
|||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 10 cctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 86 agattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatgg 145
|||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||| ||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 146 agg 148
|||
Sbjct: 128 agg 130
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggaggg 149
|||||| |||||||||||||||| |||||| |||||||||||||| |||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaa 65
Query: 61 tgaatctagatagatatat 79
|||||||||| | ||||||
Sbjct: 66 tgaatctagacatatatat 84
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
||||||||||||||||||||||||||| | |||||||||| |||| |||| | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 134 attgtgaaatggagg 148
||||||||| |||||
Sbjct: 24 attgtgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 116 aatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||| | |||||||||||||||||||||||
Sbjct: 92 aatgtaagaaagttttacattgtgaaatggagggagt 128
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%), Gaps = 13/123 (10%)
Strand = Plus / Plus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctaga----------- 70
||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatggttaatgta 60
Query: 71 --tagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatga 128
||||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tctagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Query: 129 ctt 131
|||
Sbjct: 121 ctt 123
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%), Gaps = 13/123 (10%)
Strand = Plus / Minus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatatat 81
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 82 -------------gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatga 128
||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 63 agatacattaaccatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Query: 129 ctt 131
|||
Sbjct: 3 ctt 1
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 61 tgaatctagatagatatat 79
|||||||||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
|||||||||||||||||||||| ||||||||||||| || ||||| | |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 134 attgtgaaatggagg 148
||||||||| |||||
Sbjct: 113 attgtgaaacggagg 127
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||| ||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 6 actttctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 134 acttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaa 75
Query: 61 tgaatct 67
|||||||
Sbjct: 74 tgaatct 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatga 63
||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 86 agattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatgg 145
||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||| ||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 146 agg 148
|||
Sbjct: 128 agg 130
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggaggg 149
||||||| |||||| |||||||| |||||| ||||||||||| ||||||||| ||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| | | |||| | |||||||||| |||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaa 65
Query: 61 tgaatctagatagata--tatatgtctagattcattaacatcaatatgaatgtgggaaat 118
|||||||| ||| ||| | | ||| |||||||||||||||| ||||||||||||| |||
Sbjct: 66 tgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaat 125
Query: 119 gtaagaatgacttacattgtgaaatggagggagt 152
| |||| | |||| | | ||||| |||||||||
Sbjct: 126 gctagaaagtcttataatatgaaacggagggagt 159
Score = 83.8 bits (42), Expect = 6e-16
Identities = 99/117 (84%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | |||||||||| |||||||||||| ||||||||||||
Sbjct: 155 cctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaa 96
Query: 65 tc--tagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 119
|| || | | | |||||| | |||||||||||||||| ||||||||||||| ||||
Sbjct: 95 tctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaatg 39
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 137 gtgaaatggaggga 150
|||||| |||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 65 tctaga 70
||||||
Sbjct: 73 tctaga 68
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcat-tctagcattttccacattcatattgatgttaatga 63
|||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgttaatga 69
Query: 64 atctagatagatat 77
||||||||||||||
Sbjct: 70 atctagatagatat 83
Score = 93.7 bits (47), Expect = 7e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaaga-atgacttacattgtgaa 141
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 142 atggagggagt 152
| |||||||||
Sbjct: 16 acggagggagt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 136 acttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||| ||||||||| ||||||||||||||||||||| |||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 132
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaa 65
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 66 tgaatctaga 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|||||||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 137 gtgaaatggagg 148
||||| |||||
Sbjct: 21 atgaaacggagg 10
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaa 70
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 69 tgaatctaga 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 76 atatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacat 135
|||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 136 tgtgaaatggagg 148
||||||| |||||
Sbjct: 113 tgtgaaacggagg 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||| |||||| ||||| ||||||||||||||| |||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||
Sbjct: 135 acttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaa 76
Query: 61 tgaatctaga 70
| ||||||||
Sbjct: 75 taaatctaga 66
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 75 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttaca 134
|||| ||||||||||| |||||||||||||||||| ||||||||| | |||||||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 135 ttgtgaaatggagg 148
|||||||| |||||
Sbjct: 118 ttgtgaaacggagg 131
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattca 48
||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 105 tgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 142 cctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaa 83
Query: 65 tctaga 70
||||||
Sbjct: 82 tctaga 77
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
|||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 141 aatggagggagt 152
|| |||||||||
Sbjct: 135 aacggagggagt 146
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||
Sbjct: 126 cctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaa 67
Query: 65 tctag 69
|||||
Sbjct: 66 tctag 62
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 84 ctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaat 143
|||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 144 ggagggagt 152
|||||||||
Sbjct: 122 ggagggagt 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggaggga 150
|||||||| || |||||| ||||||||||| ||||||||| |||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaa 69
Query: 65 tctagatagatat 77
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 135 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||| ||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 143 tggagggagt 152
|||||||||
Sbjct: 15 cggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 97.6 bits (49), Expect = 4e-20
Identities = 125/149 (83%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | |||||||||| |||||||||||| ||||||||||||
Sbjct: 154 cctccgtttcagattataagactttctagcattgcccacattcatatagatgttaatgaa 95
Query: 65 tctagatagatatatatgtctagattca-ttaacatcaatatgaatgtgggaaatgtaag 123
|||||||| || || |||||||||| | |||||||| ||||||||||||| |||| ||
Sbjct: 94 tctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctag 35
Query: 124 aatgacttacattgtgaaatggagggagt 152
|| | |||| | | ||||| |||||||||
Sbjct: 34 aaagtcttataatatgaaacggagggagt 6
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/149 (83%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa-tga 63
||||||||||| | | |||| | |||||||||| |||||||||||| |||||||| | |
Sbjct: 10 cctccgtttcatattataagactttctagcattacccacattcatatagatgttaaatta 69
Query: 64 atctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaag 123
||||||| | || |||| |||||||||||||||||| ||||||||||||| |||| ||
Sbjct: 70 atctagacacctacatatatctagattcattaacatctatatgaatgtgggcaatgctag 129
Query: 124 aatgacttacattgtgaaatggagggagt 152
|| | |||| | | ||||| |||||||||
Sbjct: 130 aaagtcttataatctgaaacggagggagt 158
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcat 36
||||||||||||||||||||||| ||||||||
Sbjct: 106 cctccgtttcacaatgtaagtcaatctagcat 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 126 tgacttacattgtgaaatggagggagt 152
||||||||||||||||| |||||||||
Sbjct: 84 tgacttacattgtgaaacggagggagt 110
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 131 acttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||| |||||||||||||||| |||||||| ||| ||| ||||||||| |||||||
Sbjct: 10 cctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 80 atgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtg 139
|||||||||||||||| ||||||||| ||| ||||||||| | ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 140 aaatggagggagt 152
|| |||||||||
Sbjct: 18 gaacggagggagt 6
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagg 127
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 95.6 bits (48), Expect = 2e-19
Identities = 91/104 (87%), Gaps = 6/104 (5%)
Strand = Plus / Plus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagata----gatat--atat 81
|||||||||| |||||||||||| |||||||||||||||||||| ||||| || |
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgt 64
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaa 125
||||||||||||||||||| ||||||||||||| ||||| ||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 74/86 (86%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 40 ccacattcatattgatgttaatgaatctagatagat----at--atatgtctagattcat 93
|||||||||||| |||||||||||||||||| | || || |||| |||||||||||
Sbjct: 96 ccacattcatatggatgttaatgaatctagacacattaatatccatatatctagattcat 37
Query: 94 taacatcaatatgaatgtgggaaatg 119
||||||| ||||||||||||| ||||
Sbjct: 36 taacatccatatgaatgtgggcaatg 11
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||| |||||||| | ||||||| || ||||||| |||| ||| |||
Sbjct: 6 acttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatactaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | |||| | || |||||||||||| ||| ||||||||||||| ||||
Sbjct: 66 tgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgc 125
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||| ||||| |||||||||
Sbjct: 126 tagaaagtcttacattatgaaacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| |||||||||||| ||| |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtggg 114
||||| | | |||||||||||||||||||| ||| |||| ||||||||
Sbjct: 93 tctaggcacacatatatgtctagattcattagtatctatataaatgtggg 44
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 95.6 bits (48), Expect = 2e-19
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 17 aatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagatagata 76
|||||||| | |||||||||| |||||||||||| ||| |||||||||||| | | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|||||||||||||||||| |||| ||||||||||||| ||||| |||| | ||||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 17 aatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagatagata 76
|||||||| | ||||| |||| |||||||||||| |||| |||||||||||| | |||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
| | || |||||||||||| ||| ||||||||||||| |||| |||| | ||||||||
Sbjct: 60 tgtgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| ||||||||||||| ||||||||||||||||| | ||| | || ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
||||||||||||| ||||||||||||| ||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatg 100
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| |||||||||||| ||||||||||||||||| | | ||| ||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 88 attcattaacatcaatatgaatgtgg 113
|||||||||||| ||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgg 21
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 124
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 7e-19
Identities = 97/116 (83%), Gaps = 12/116 (10%)
Strand = Plus / Plus
Query: 17 aatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagatagata 76
|||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat----------- 49
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgactta 132
|||||||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 50 -atatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 77.8 bits (39), Expect = 4e-14
Identities = 95/116 (81%), Gaps = 12/116 (10%)
Strand = Plus / Minus
Query: 21 taagtcattctagcattttccacattcatattgatgttaatgaatctagatagatatata 80
|||||||||||||||||| |||||||||||||||| ||||||||||||| |
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagaca-------- 53
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|| |||||||| |||||||||||||||| |||||| |||||||||||||||
Sbjct: 52 ----tatattcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/150 (83%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattc--atattgatgttaatg 62
|||||||||||||||||||| | || ||||||| ||||| | |||| |||||||||
Sbjct: 155 cctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgttaatg 96
Query: 63 aatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaa 122
|||||| | | ||| |||||| |||||||||||||||| | ||||||||||| |||| |
Sbjct: 95 aatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaatgcta 36
Query: 123 gaatgacttacattgtgaaatggagggagt 152
||| | |||||||||||||| ||||||||
Sbjct: 35 gaaagtcttacattgtgaaacagagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| ||||||||||||||| | |||||||||| |||||||||| | ||||||||||||
Sbjct: 10 cctctgtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaa 69
Query: 65 tctagatagatatatatgtctagattcattaacat 99
|||| | | || ||| ||| |||||||||||||||
Sbjct: 70 tctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 87.7 bits (44), Expect = 4e-17
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagt 124
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||||||| |||||||| || ||| ||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaa 65
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 66 tgaatctaga 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 134 cctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
||||||||||||||||||| ||||||||| ||| || |||||| | |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 137 gtgaaatggagg 148
|||||| |||||
Sbjct: 21 gtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||| ||||| | ||||||||| ||||||||| |||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagt 138
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 132 cctccgtttcataatgtaagttattctagcattgtccacattcatatagatgttaataaa 73
Query: 65 tctaga 70
||||||
Sbjct: 72 tctaga 67
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 79 tatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgt 138
|||||||||||| ||||||||| |||||||||||| |||| ||||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 139 gaaatggagggagt 152
|||| |||||||||
Sbjct: 123 gaaacggagggagt 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattca 48
||||||||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 6 acttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcata 50
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||||||| |||| | ||| ||||| ||||||
Sbjct: 138 acttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgttaa 79
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 78 tgaatctaga 69
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|||||||||||||||||||||| ||||| ||| | ||||| ||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 137 gtgaaatggagg 148
|||||| |||||
Sbjct: 123 gtgaaacggagg 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 103 tatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||| |||| ||||||||||||||||||||| |||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||||||||||||||||| |||| ||| ||||||||||||| |||||||
Sbjct: 131 cctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaa 72
Query: 65 tctaga 70
||||||
Sbjct: 71 tctaga 66
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 142 atggagggagt 152
| |||||||||
Sbjct: 125 acggagggagt 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
||||||||||||||||||||||||| ||||||| |||| || |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||| || ||||| ||||| ||||||||||||||| |||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||
Sbjct: 135 cctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaa 76
Query: 65 tctaga 70
||||||
Sbjct: 75 tctaga 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
|||||||||| ||||||||| |||||||||||| |||| |||| | ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 141 aatggagggagt 152
|| |||||||||
Sbjct: 128 aacggagggagt 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
|||||||||||||||||||| | || ||||||| |||| |||||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 91.7 bits (46), Expect = 3e-18
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 30 ctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagat 89
|||||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagata----tatatgtctagat 35
Query: 90 tcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| ||||||||||||| |||||
Sbjct: 34 tcattaacatatatatgaatgtgggcaatgt 4
Score = 69.9 bits (35), Expect = 9e-12
Identities = 69/80 (86%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 40 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacat 99
|||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||
Sbjct: 11 ccacattcatatatatgttaatgaatctagacatatatat----ctagattcattaacat 66
Query: 100 caatatgaatgtgggaaatg 119
||||||||||||| ||||
Sbjct: 67 atatatgaatgtgggcaatg 86
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 133 acttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaa 74
Query: 61 tgaatctaga 70
| ||||||||
Sbjct: 73 taaatctaga 64
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 78 atatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattg 137
||||||||||||| ||||||||| ||||||||||||| |||| |||| | |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 138 tgaaatggagg 148
||||| |||||
Sbjct: 119 tgaaacggagg 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||| | |||||| | |||||||||| | |||||||||||
Sbjct: 10 cctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcata 50
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 94 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 103 tatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 90
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattt 38
|||| |||||||||||||||||||||||||||||
Sbjct: 10 cctctgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| ||||||||
Sbjct: 36 agaatgacttacattgtgaaacagagggagt 6
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaa 65
Query: 61 tg 62
||
Sbjct: 66 tg 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 91 cattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||| ||||| |||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 7 tccgtttcacaatgtaagtcattctagcatt 37
|||||| ||||||||||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattga 54
||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 113 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagt 6
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | |||||| ||| |||| ||||||| ||||| ||||||
Sbjct: 153 cctccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaa 94
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| | | ||||||||||||||||||||| |||| ||||||||||||| ||||| |||
Sbjct: 93 tctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatgttaga 34
Query: 125 a 125
|
Sbjct: 33 a 33
Score = 79.8 bits (40), Expect = 1e-14
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 6 acttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaa 108
|||||||||| | |||||| ||| |||||||||| ||||| |||||||
Sbjct: 66 tgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 121 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaa 62
Query: 65 tcta 68
||||
Sbjct: 61 tcta 58
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
|||||||||||| |||||||||||| || |||||| ||||||||||||||| ||||| |
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 145 gagggagt 152
||||||||
Sbjct: 118 gagggagt 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||| ||||||| ||||| ||||||||||| ||||||||| |||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
|||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccaca 44
||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 102 cctccgttttacaatgtaaatcattctagcatttcccaca 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 109 tgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||| ||||||| ||||||||| ||| |||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagt 106
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 87.7 bits (44), Expect = 4e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccaca 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 acttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcat 49
||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 104 atgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||| |||||||| | ||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagt 6
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 109 tgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggagg 103
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 118 acttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
||||||||||||| |||||||||||||||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 87.7 bits (44), Expect = 4e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| ||| |||||||| |||||||||||||||| | | ||||||| ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
||||||||||||| ||||||||||||| ||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatg 100
Score = 87.7 bits (44), Expect = 4e-17
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| |||||||||||| ||||||||||||||||| | |||| |||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
|||||||||||| |||||||| |||| ||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatg 15
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 28 ttctagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
|||||||||| |||||||||||| |||||||||||||| | | ||||||||||||||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 88 attcattaacatcaatatgaatgtgggaaatg 119
||| |||||||| ||||||||||||| ||||
Sbjct: 70 atttattaacatatatatgaatgtgggcaatg 39
Score = 77.8 bits (39), Expect = 4e-14
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| | |||| | |||| ||||| |||||||||||| |||||||
Sbjct: 6 acttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 119
| |||||||| | |||||| || | |||||||||||||| ||||||||||||| ||||
Sbjct: 66 taaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatg 124
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 116 cctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 89 ttcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 149 gagt 152
||||
Sbjct: 117 gagt 120
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 77 tatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacatt 136
|||||||||||||||| ||||||| ||| |||||||| |||||| |||||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 137 gtgaaatggagggagt 152
| ||| |||||||||
Sbjct: 122 ataaaacggagggagt 137
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||| | |||||||||||||||| |||||||||||||| ||| ||||||| ||||
Sbjct: 133 cctccgttttataatgtaagtcattctaacattttccacattcgtatggatgttagtgaa 74
Query: 65 tctaga 70
||||||
Sbjct: 73 tctaga 68
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||| ||||||||||| ||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagt 6
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||| |||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattc 47
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 59
||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 136 acttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||||||||||||||||| || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 65 tcta 68
||||
Sbjct: 70 tcta 73
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
|||||||||||| |||||||| || || |||||| ||||||||||| ||||||||| |
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 145 gaggga 150
||||||
Sbjct: 13 gaggga 8
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 55
||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgttt-cacaatgtaagtcattctagcattttccacattcatattga 54
||||||||||||| |||||| |||||||||||||||||| |||||||||||||||
Sbjct: 115 acttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacatt 46
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattc 47
|||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 107 aatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagt 115
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 65 tctaga 70
||||||
Sbjct: 43 tctaga 38
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
||||||||||| |||||||| |||||||||||| |||| |||| | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 141 aatggaggga 150
|| |||||||
Sbjct: 96 aacggaggga 105
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| |||||| |||||||| | |||||||||| ||||||||||||| ||||||||||||
Sbjct: 127 cctctgtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaa 68
Query: 65 tctaga 70
||||||
Sbjct: 67 tctaga 62
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 134 attgtgaaatggagggagt 152
||| ||||| ||||||||
Sbjct: 113 attatgaaacagagggagt 131
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||| ||||| |||||||| | |||||||||| ||||||||||||| |||||
Sbjct: 6 acttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 83.8 bits (42), Expect = 6e-16
Identities = 123/152 (80%), Gaps = 11/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||||| |||||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | ||||||||||||||||| ||||| ||||||| ||||
Sbjct: 66 tgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatgc 114
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
|||| | |||||||| ||||| |||||||||
Sbjct: 115 tagaaagtcttacattatgaaacggagggagt 146
Score = 75.8 bits (38), Expect = 2e-13
Identities = 116/144 (80%), Gaps = 11/144 (7%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| |||||| ||||| ||||||||||||
Sbjct: 142 cctccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaa 83
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
||||| |||||||||||||||||||| | |||||||| | |||| |||
Sbjct: 82 tctag-----------tgtctagattcattaacatctaagtgaatgtgagcaatgctaga 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||| |||||||||||| ||||| |||||| |||||||| ||||
Sbjct: 107 acttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatattaa 48
Query: 61 t 61
|
Sbjct: 47 t 47
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattcta 32
||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcta 37
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||| ||||||||||||| ||||||||| ||||||||| || ||| | ||| |||||||
Sbjct: 6 acttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaa 65
Query: 61 tgaatctagatagatat 77
|||||||||| ||||||
Sbjct: 66 tgaatctagacagatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||| ||||||||| || |||||| |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggaggg 149
||||||||||| |||||| | ||||||||| ||||||||| ||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 76 atatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacat 135
|||| ||||||||||||||||||| ||| | ||| || ||||| | ||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 136 tgtgaaa 142
|||||||
Sbjct: 22 tgtgaaa 16
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattga 54
||||| ||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 111 cctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagt 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||||||| |||| | ||||||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 108 acttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggagg 104
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 124 aatgacttacattgtgaaatggagggagt 152
||||||||||||||||||| |||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagt 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcatt 29
|||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 56
|||| |||||| ||||||||||||| || |||||| |||||| |||||||||
Sbjct: 138 cctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||| |||||| |||||| | ||||||||||||| ||||| ||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagt 142
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||| ||||| |||||||| | |||||||||| ||||||||||||| ||||||||| ||
Sbjct: 10 cctccatttcataatgtaagactttctagcattgtccacattcatatagatgttaataaa 69
Query: 65 tctagata 72
||||||||
Sbjct: 70 tctagata 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||| ||||||||| |||||||||||| |||| |||| | |||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 143 tggagggagt 152
||||||||||
Sbjct: 15 tggagggagt 6
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| |||||||||||| ||||||||||||
Sbjct: 135 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 76
Query: 65 tcta 68
||||
Sbjct: 75 tcta 72
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 85 tagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatg 144
|||||||||||||||| ||||||||||||| |||| |||| | |||||||| ||||| |
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 145 gagggagt 152
||||||||
Sbjct: 132 gagggagt 139
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatgt 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatgt 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 34 cattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 87
||||| ||||||||||||||||| |||| ||||||| | ||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctag--acatatatatgtctag 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 34 cattttccacattcatattgatgttaatgaatctagatagatatat 79
||||| ||||||||||||||||| ||||||| ||||| | ||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||| ||
Sbjct: 92 acttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaaa 33
Query: 61 tga 63
|||
Sbjct: 32 tga 30
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 90 tcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||| |||||||||| |||||| |||||| ||||||||||| ||||| ||| |||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagg 88
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 59
||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattt 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 125 acttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 94 taacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||| ||||||||||||||| ||||| ||||| ||||||||| |||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 95 agaatgacttacattgtgaaacggagg 121
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct: 135 acttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 76 atatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacat 135
||||| ||||||||||||||| ||| ||||| || |||| ||| | ||||||||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 136 tgtgaaatggagggagt 152
| ||||| |||||||||
Sbjct: 22 tatgaaacggagggagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||||||||||| ||| ||| || ||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatat 51
|||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacatt 46
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 8 ccgtttcacaatgtaagtcattctagcattttccacattcatat 51
||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||| ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 107 aatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 148
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 102 atatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||| ||||||||||||| |||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaa 95
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 124/152 (81%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | || |||| || |||||||||| | ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaa 65
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgt 120
|||||||||| | || ||| | ||||||||||||||| |||| ||||||| | ||
Sbjct: 66 tgaatctagacatatgtattt----agattcattaacatctttatgtatgtgggtagtgc 121
Query: 121 aagaatgacttacattgtgaaatggagggagt 152
| || | |||| ||||||||| |||||||||
Sbjct: 122 taaaaagtcttatattgtgaaacggagggagt 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 118/144 (81%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||| | || ||||| | |||||| |||| ||||||||||||
Sbjct: 149 cctccgtttcacaatataagactttttagcactacccacatacataaagatgttaatgaa 90
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaaga 124
|||| ||| |||| ||||||||||||||||||| | ||||||||||| || | | |
Sbjct: 89 tctaaatacatat----gtctagattcattaacatctaaatgaatgtgggcaacgctaca 34
Query: 125 atgacttacattgtgaaatggagg 148
| | |||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattga 54
|||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 99 tcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||| || |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcatt 37
||||| ||||||||||||| |||||||||||||||||
Sbjct: 103 acttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| |||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 69
Query: 65 tctaga 70
| ||||
Sbjct: 70 tttaga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
|||||| ||||||||||||| ||||||||||||| |||| |||| | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 141 aatggagggagt 152
|| |||||||||
Sbjct: 17 aacggagggagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 57
||||||||||| |||||||| | |||||||||| |||||||||||| |||||
Sbjct: 137 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 96 acatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||| ||||||||||||| |||| |||| | |||||||| ||||| |||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagt 141
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||| |||||| ||||||| ||||||||||||| |||||| ||||| ||||||||||||
Sbjct: 127 cctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaa 68
Query: 65 tctaga 70
||||||
Sbjct: 67 tctaga 62
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaa 141
||||||||||||||||||| ||||| ||||||| |||| ||||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 142 atggagggagt 152
| ||||||||
Sbjct: 121 acagagggagt 131
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcatt 37
||||||||||||||| |||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattt 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||| | | |||| | |||||||||| |||||||||||| ||||||||
Sbjct: 125 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaa 66
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 65 tgaatctaga 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 80 atgtctagattcattaacatcaatatgaatgtgggaaatg 119
||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatg 92
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacat 45
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 108 atgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
|||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcatt 37
||||||||||||||||||| |||||||||||||
Sbjct: 90 cctccgtttcacaatgtaaatcattctagcatt 58
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||| ||||||||||||| |||||||||
Sbjct: 64 agaatgatttacattgtgaaacggagggagt 94
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 6 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 65
|||||||||| |||||||| | |||||||||| |||| ||| |||| |||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 66 ctaga 70
|||||
Sbjct: 71 ctaga 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 79 tatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgt 138
|||||||||||||||||||||| |||| ||| ||| |||| |||| | |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 139 gaaatggagggagt 152
|||| |||| ||||
Sbjct: 123 gaaacggagagagt 136
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacat 45
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 6 acttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagc 34
||||||||||||||||||||||||||||||
Sbjct: 89 cctccgtttcacaatgtaagtcattctagc 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 122 agaatgacttacattgtgaaatggagggagt 152
||||||||||||||||||||| |||||||||
Sbjct: 63 agaatgacttacattgtgaaacggagggagt 93
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 108 atgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||| |||||||||||||||||| || |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggagg 10
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 22 aagtcattctagcattttccacattcatattgatgttaatgaatc 66
||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 25 tcattctagcattttccacattcatattgatgttaatgaatc 66
|||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 87 gattcattaacatcaatatgaatgtgggaaatgtaagaatgactt 131
||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 87 gattcattaacatcaatatgaatgtgggaaatgtaagaatga 128
||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 9 cgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 65
|||| ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcat 49
||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 10 cctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 88 attcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtg 139
|||||||| ||||||||||||||||||||||| | |||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 104 atgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||| |||||| ||||||| ||||||||||||| |||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||| ||||||||||||| ||||| ||||||||| || ||| |||||||| |||||||
Sbjct: 101 cctccatttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaa 42
Query: 65 tctagata 72
||||||||
Sbjct: 41 tctagata 34
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| |||||||| ||| || ||||| | ||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 143 tggagggagt 152
||||||||||
Sbjct: 96 tggagggagt 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcatt 29
|||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||||||||| |||||||| || ||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||||||||||||||||| ||||||||| |||||||| || ||| |||||||||||||
Sbjct: 121 acttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 93 ttaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagggagt 152
||||||||||||| ||| || |||||| | ||||||||||||||||||| |||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 93 ttaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
||||||||||||| ||| || |||||| | ||||||||| ||||||||| |||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggagg 117
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||||||||| ||| ||| |||| |||||||||||||
Sbjct: 139 acttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 52
||||||||||||||||||||||||| ||| || |||| ||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgggaaatgtaagaatgacttacattgtgaaatggagg 148
|||||||||||||||||| | ||| ||||||||||||||| |||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggagg 135
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||||||||||||||||| | |||||||| || |||||||||| | |||||||
Sbjct: 138 acttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgttat 80
Query: 61 tgaatcta 68
||||||||
Sbjct: 79 tgaatcta 72
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcatt 37
||||||||||||||||||| |||| | ||||||||||
Sbjct: 6 acttcctccgtttcacaatctaagcctttctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 78 atatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattg 137
|||||| |||||||| ||||||| | |||||||||| || || |||| | |||||||||
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacattg 123
Query: 138 tgaaatggagg 148
||||| |||||
Sbjct: 124 tgaaacggagg 134
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||| | |||||||||| |||||| ||||| ||||||||||||
Sbjct: 131 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 72
Query: 65 tcta 68
||||
Sbjct: 71 tcta 68
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 78 atatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattg 137
|||||| |||||||||||||||| ||||| ||||||| |||| |||| | |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 138 tgaaatggagggagt 152
||||| |||||||||
Sbjct: 121 tgaaacggagggagt 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacatt 46
||||||||||||||||||| |||| | || | ||||| ||||||||
Sbjct: 6 acttcctccgtttcacaatataagactttttggcattgtccacatt 51
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||||||| |||| | |||||||||| |||||| ||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 69
Query: 65 tcta 68
||||
Sbjct: 70 tcta 73
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 78 atatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattg 137
|||||| |||||||||||||||| ||||| ||||||| |||| |||| | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 138 tgaaatggagggagt 152
||||| |||||||||
Sbjct: 20 tgaaacggagggagt 6
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacatt 46
||||||||||||||||||| |||| | || | ||||| ||||||||
Sbjct: 135 acttcctccgtttcacaatataagactttttggcattgtccacatt 90
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||| ||| |||||| |||||||||| || |||||||| ||||||||
Sbjct: 6 acttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgttaa 65
Query: 61 tgaatctagat 71
|||||||||||
Sbjct: 66 tgaatctagat 76
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| ||| |||| | |||||||||| ||| |||||||| |||| |||||||
Sbjct: 135 cctccgtttcataatataagactttctagcattacccatattcatatagatgctaatgaa 76
Query: 65 tctagat 71
|||||||
Sbjct: 75 tctagat 69
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
||||||||||||| |||| |||||||| |||| |||| |||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 143 tggagggagt 152
|||||||||
Sbjct: 130 cggagggagt 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 83 tctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtgaaa 142
|||||||||||||||||| |||||||| || | |||| |||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
|||||||||||||||||||||| |||| ||||||||||||| |||| |||| | ||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 134 attgtgaaatggagggagt 152
| | ||||| |||||||||
Sbjct: 119 aatatgaaacggagggagt 137
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | ||||| |||| |||||||||||| |||| |||||||
Sbjct: 133 cctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaa 74
Query: 65 tctagatagatatatat 81
|||||| | ||||||||
Sbjct: 73 tctagacatatatatat 57
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
|||||||||||||||||||| | |||||| ||| |||||||| || | ||||||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 65 tct 67
|||
Sbjct: 53 tct 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccaca 44
|||||||||||||||||||| | |||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaaggctttctagcattgtccaca 49
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 74 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttac 133
|||||||||||||||||||||||||| ||||||||||||| |||| |||| | ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 134 attgtgaaatggagggagt 152
| | ||||| |||||||||
Sbjct: 113 aatttgaaacggagggagt 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| | | |||| | |||||||||| |||||||||||| |||||||||||
Sbjct: 127 cctccgtttcaaattataagactttctagcattacccacattcatatatatgttaatgaa 68
Query: 65 tctagatagatatat 79
|||||| | ||||||
Sbjct: 67 tctagacatatatat 53
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||| | | |||||||||| |||||||||| |
Sbjct: 10 cctccgtttcataatgtaagactttctagcactgtttacattcatatagatgttaatgga 69
Query: 65 tctagatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 119
|||| | | || || |||||||||||||| ||||| || |||| ||||| ||||
Sbjct: 70 tctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Score = 69.9 bits (35), Expect = 9e-12
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||||| |||| ||| |||| | |||||||||| |||| |||| || ||||| ||
Sbjct: 157 acttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtcaa 98
Query: 61 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgt 111
|||||||||| | || || ||| ||||| |||||||||| ||||||||||
Sbjct: 97 tgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgt 47
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
||||| |||||||||||||||||| | |||||||||| |||||||||||| ||| |||
Sbjct: 125 acttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaa 66
Query: 61 tgaatctaga 70
||||| ||||
Sbjct: 65 tgaatttaga 56
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 79 tatgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgt 138
|||||||| |||||||| ||| ||||||||||||| |||| |||| | ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 139 gaaa 142
||||
Sbjct: 112 gaaa 115
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattt 38
|||| |||||||||||||||||||||||||||||||||
Sbjct: 88 acttactccgtttcacaatgtaagtcattctagcattt 51
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattctag 33
|||||||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctag 38
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 107 aatgtgggaaatgtaagaatgacttacattgtgaaatggag 147
||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggag 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 agaatgacttacattgtgaaatggagg 148
||||||||||||||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 64
||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 65 tctaga 70
||||||
Sbjct: 70 tctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaatgacttacattgtga 140
||||||||||| |||||||| |||||||| ||| |||| |||| | |||||||| |||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 141 aatggaggga 150
|| |||||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaa 60
|||||||| |||||| | | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 134 acttcctctgtttcatattataagactttctagcattgtccacattcatatatatgttaa 75
Query: 61 tgaatctaga 70
||||||||||
Sbjct: 74 tgaatctaga 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 81 tgtctagattcattaacatcaatatgaatgtgg 113
||||||||||||||||||| ||||||||||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtgg 95
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 40 ccacattcatattgatgttaatgaatctagatagatatatatgtcta--gattcattaac 97
|||||||||||| |||||||||||||||| | | | |||| ||| || |||||||||||
Sbjct: 120 ccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaac 61
Query: 98 atcaatatgaatgtggg 114
||| |||||||||||||
Sbjct: 60 atctatatgaatgtggg 44
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 40 ccacattcatattgatgttaatgaatctagatagatatatatgtcta--gattcattaac 97
|||||||||||| |||||||||||||||| | | | |||| ||| || |||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaac 104
Query: 98 atcaatatgaatgtggg 114
||| |||||||||||||
Sbjct: 105 atctatatgaatgtggg 121
