miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 172 bits (87), Expect = 9e-43
Identities = 119/127 (93%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatc-tag 78
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcattg 75
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | |||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 76 attcat-taacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 139 gggagta 145
|||||||
Sbjct: 135 gggagta 141
Score = 149 bits (75), Expect = 1e-35
Identities = 116/127 (91%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-g 78
||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||| | |
Sbjct: 130 tttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatcaatg 71
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | ||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 70 attcat-taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 139 gggagta 145
|| ||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 170 bits (86), Expect = 3e-42
Identities = 117/126 (92%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 129 tttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-taacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 163 bits (82), Expect = 9e-40
Identities = 116/126 (92%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||| || |||||| |||||||||||||||| ||||||||||
Sbjct: 76 ttcat-taacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacggag 134
Query: 140 ggagta 145
| ||||
Sbjct: 135 gaagta 140
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 163 bits (82), Expect = 9e-40
Identities = 116/126 (92%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 129 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctata 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | |||| |||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 catat-taacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 114/126 (90%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgtataga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 76 ttcat-taacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 134
Query: 140 ggagta 145
||||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 155 bits (78), Expect = 2e-37
Identities = 115/126 (91%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 129 tttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatctata 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | |||| |||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 catat-taacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 113/126 (89%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgtataga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 76 ttcat-taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 140 ggagta 145
||||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 155 bits (78), Expect = 2e-37
Identities = 115/126 (91%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatattgatgtta-----tctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 71 ttcat-taacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggag 129
Query: 140 ggagta 145
||||||
Sbjct: 130 ggagta 135
Score = 149 bits (75), Expect = 1e-35
Identities = 113/126 (89%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 124 tttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatctaga 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 64 ------taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 155 bits (78), Expect = 2e-37
Identities = 114/126 (90%), Gaps = 5/126 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 125 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaga 66
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||| |||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 65 tagat-----atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 114/126 (90%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||| |||||||||||| || |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgat----atctatctaga 71
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 72 ttcat-taacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 130
Query: 140 ggagta 145
||||||
Sbjct: 131 ggagta 136
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 153 bits (77), Expect = 8e-37
Identities = 112/123 (91%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 127 tttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatctaga 68
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 67 catat---acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 gga 142
|||
Sbjct: 10 gga 8
Score = 143 bits (72), Expect = 8e-34
Identities = 112/123 (91%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatg--tctaga 73
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 74 ttcat-tgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 132
Query: 140 gga 142
|||
Sbjct: 133 gga 135
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 153 bits (77), Expect = 8e-37
Identities = 117/128 (91%), Gaps = 3/128 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 127 tttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc--ga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-tagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagtagt 147
||||||||
Sbjct: 10 ggagtagt 3
Score = 149 bits (75), Expect = 1e-35
Identities = 115/126 (91%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc--ga 73
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 74 ttcat-tagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 132
Query: 140 ggagta 145
||||||
Sbjct: 133 ggagta 138
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 153 bits (77), Expect = 8e-37
Identities = 121/135 (89%), Gaps = 8/135 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 80 -----ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtg 131
| ||| | ||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 76 cattctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 135
Query: 132 aaacggagggagtag 146
|||||||||||||||
Sbjct: 136 aaacggagggagtag 150
Score = 147 bits (74), Expect = 5e-35
Identities = 121/136 (88%), Gaps = 8/136 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
Query: 80 -----ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtg 131
| ||| | ||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 132 aaacggagggagtagt 147
||||||||| ||||||
Sbjct: 18 aaacggaggaagtagt 3
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 153 bits (77), Expect = 8e-37
Identities = 117/128 (91%), Gaps = 3/128 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat--cta 77
||||||||| |||||||||||||||||||||| |||||||||||||| |||| || |||
Sbjct: 131 tttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggatatcta 72
Query: 78 gattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
|||| || | | |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 71 gattcat-taatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgg 13
Query: 138 agggagta 145
||||||||
Sbjct: 12 agggagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 114/127 (89%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatctaga 75
Query: 80 t-tgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
| | | |||||||||||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 76 tatccattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 135
Query: 139 gggagta 145
|| ||||
Sbjct: 136 ggaagta 142
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 151 bits (76), Expect = 3e-36
Identities = 115/126 (91%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct--- 72
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 73 tttat-taacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggag 131
Query: 140 ggagta 145
||||||
Sbjct: 132 ggagta 137
Score = 135 bits (68), Expect = 2e-31
Identities = 113/126 (89%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 126 tttcacaaagtaagtcattctagcatttcccacattcatattgatgttaataaa---aga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-taccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 151 bits (76), Expect = 3e-36
Identities = 114/127 (89%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 76 ------caacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 129
Query: 140 ggagtag 146
|||||||
Sbjct: 130 ggagtag 136
Score = 131 bits (66), Expect = 3e-30
Identities = 112/126 (88%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124 tttcataatgtaagtcattctagcatttcccacattcatattgatgttg-----tctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-tgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 149 bits (75), Expect = 1e-35
Identities = 113/127 (88%), Gaps = 9/127 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatcta-- 64
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 63 -------aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagtag 146
|||||||
Sbjct: 10 ggagtag 4
Score = 107 bits (54), Expect = 4e-23
Identities = 109/127 (85%), Gaps = 9/127 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgtt--------taga 67
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| || ||| |||||||||||| ||||||||||||||
Sbjct: 68 ttcat-taacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 140 ggagtag 146
| |||||
Sbjct: 127 gaagtag 133
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 147 bits (74), Expect = 5e-35
Identities = 112/126 (88%), Gaps = 9/126 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 121 tttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctaga 62
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 t---------atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 109/126 (86%), Gaps = 9/126 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgat--------atctaga 67
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||| |||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 68 ttcat-tagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 126
Query: 140 ggagta 145
||||||
Sbjct: 127 ggagta 132
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 147 bits (74), Expect = 5e-35
Identities = 114/126 (90%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| |||||||||||| |||| ||||| |||||||||||||||||||||||||||
Sbjct: 76 catat-atacatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggag 134
Query: 140 ggagta 145
| ||||
Sbjct: 135 gaagta 140
Score = 115 bits (58), Expect = 2e-25
Identities = 110/126 (87%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||| ||||||||||| || ||||||
Sbjct: 129 tttcacaatgtaagtcattctagcattttgtacatacatattgatgtatatatgtctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gtagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 147 bits (74), Expect = 5e-35
Identities = 118/131 (90%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat----c 75
||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 16 tttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaatttgtc 75
Query: 76 tagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
|||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 76 tagatttatga-acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 134
Query: 136 ggagggagtag 146
||||| |||||
Sbjct: 135 ggaggaagtag 145
Score = 145 bits (73), Expect = 2e-34
Identities = 117/130 (90%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 133 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatctaga 74
Query: 79 ---attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
||| ||| ||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 73 caaattcatg-aacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaac 15
Query: 136 ggagggagta 145
||||||||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 147 bits (74), Expect = 5e-35
Identities = 112/126 (88%), Gaps = 9/126 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 76 t---------atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 126
Query: 140 ggagta 145
| ||||
Sbjct: 127 gaagta 132
Score = 113 bits (57), Expect = 7e-25
Identities = 109/126 (86%), Gaps = 9/126 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatattgat--------atctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||| |||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 69 ttcat-tagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 145 bits (73), Expect = 2e-34
Identities = 114/127 (89%), Gaps = 3/127 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || ||||||||||||||||| |||||| || ||||||||||||| ||||||||||
Sbjct: 76 t---agtgacatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggag 132
Query: 140 ggagtag 146
|||||||
Sbjct: 133 ggagtag 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 107/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||| ||||||||||||||||||||||||||| | | |||||||
Sbjct: 127 tttcataatgtaagtcattgtagcatttcccacattcatattgatgtcact--atctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||| |||||||||| ||||| |||||||||||| ||| |||||| |||
Sbjct: 69 ttcat-tagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaacagag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 143 bits (72), Expect = 8e-34
Identities = 114/127 (89%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatattgatgttaatgaatctaga 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | ||||||| || ||||||| ||||| |||||||||||||||| ||||||||||
Sbjct: 68 --catataacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggag 11
Query: 140 ggagtag 146
|||||||
Sbjct: 10 ggagtag 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgtta-atgaatctag 78
||||| ||| |||||||||||||||||| |||||| || ||||||||| ||| |||||
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacatttatgttgatgttatatg--tctag 73
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | ||||||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 74 attcat-taacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacgga 132
Query: 139 gggagtag 146
|| |||||
Sbjct: 133 ggaagtag 140
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 141 bits (71), Expect = 3e-33
Identities = 118/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctagc 75
Query: 80 ttgatgtta-catcaatatgaatgtgagaaatgttaga-atgacttacattgtgaaacgg 137
| | ||| |||||||||||||||| |||||| || | |||||||||||||||||||||
Sbjct: 76 tatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgg 135
Query: 138 agggagtagtt 148
|||||||||||
Sbjct: 136 agggagtagtt 146
Score = 115 bits (58), Expect = 2e-25
Identities = 114/129 (88%), Gaps = 4/129 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcat-tctagcatttcccacattcatattgatgttaatgaat--ct 76
||||||||| |||||||| | |||||||||||||||||||||||||| ||||| || ||
Sbjct: 132 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtatagct 73
Query: 77 agattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 136
||||| || | |||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 72 agattcat-tagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 137 gagggagta 145
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 141 bits (71), Expect = 3e-33
Identities = 118/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 tttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctagc 73
Query: 80 ttgatgtta-catcaatatgaatgtgagaaatgttaga-atgacttacattgtgaaacgg 137
| | ||| |||||||||||||||| |||||| || | |||||||||||||||||||||
Sbjct: 72 tatacattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacgg 13
Query: 138 agggagtagtt 148
|||||||||||
Sbjct: 12 agggagtagtt 2
Score = 115 bits (58), Expect = 2e-25
Identities = 114/129 (88%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcat-tctagcatttcccacattcatattgatgttaatgaat--ct 76
||||||||| |||||||| | |||||||||||||||||||||||||| ||||| || ||
Sbjct: 16 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatgtatagct 75
Query: 77 agattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 136
||||| || | |||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 76 agattcat-tagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 134
Query: 137 gagggagta 145
|||| ||||
Sbjct: 135 gaggaagta 143
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 137 bits (69), Expect = 5e-32
Identities = 115/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
Sbjct: 124 tttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatct-ca 66
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || |||||| |||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 65 ttaat-----atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggag 11
Query: 140 ggagtagtt 148
|||||||||
Sbjct: 10 ggagtagtt 2
Score = 109 bits (55), Expect = 1e-23
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||
Sbjct: 16 tttcacaatataagtcattctagcatttcacacattcacattgatattaatg-----aga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | | |||||| |||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 71 ttcat-taatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggag 129
Query: 140 ggagtag 146
| |||||
Sbjct: 130 gaagtag 136
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 135 bits (68), Expect = 2e-31
Identities = 112/127 (88%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 124 tttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatctcat 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| | ||||||||||||||||||||||| ||||||||||||||| ||||||| |||
Sbjct: 64 tag------catcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagag 11
Query: 140 ggagtag 146
|||||||
Sbjct: 10 ggagtag 4
Score = 115 bits (58), Expect = 2e-25
Identities = 110/126 (87%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| || ||||||||||||||||||| |||||||||||||||| |||||| ||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga-----ga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 71 ttcat-tagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 129
Query: 140 ggagta 145
| ||||
Sbjct: 130 gaagta 135
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 133 bits (67), Expect = 8e-31
Identities = 112/125 (89%), Gaps = 4/125 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 134 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctaga 75
Query: 80 -ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
| ||| | |||||||||| ||||||||||||| |||||||||||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 136 ggagg 140
|||||
Sbjct: 14 ggagg 10
Score = 117 bits (59), Expect = 5e-26
Identities = 114/131 (87%), Gaps = 6/131 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||| ||| ||||||||||||||||||| |||||| |||||||||||||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatctagt 75
Query: 79 ----attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
||| || | |||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 76 ctagattcat-taacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 134
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 135 cggagggagta 145
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 133 bits (67), Expect = 8e-31
Identities = 117/132 (88%), Gaps = 5/132 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 135 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactaga 76
Query: 79 -attgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
|| ||| | ||||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 75 catagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Query: 135 cggagggagtag 146
|||||| |||||
Sbjct: 15 cggaggaagtag 4
Score = 131 bits (66), Expect = 3e-30
Identities = 117/133 (87%), Gaps = 7/133 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 77
||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatctatg 75
Query: 78 ----gattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 133
| || || | ||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 tctagtttcat-taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 134
Query: 134 acggagggagtag 146
|| ||||||||||
Sbjct: 135 accgagggagtag 147
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 133 bits (67), Expect = 8e-31
Identities = 114/128 (89%), Gaps = 5/128 (3%)
Strand = Plus / Minus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga--t 80
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatctatatct 73
Query: 81 tgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 72 agatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgg 13
Query: 138 agggagta 145
||||||||
Sbjct: 12 agggagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 116/131 (88%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatctaga 75
Query: 79 -attgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
|| ||| | ||||||||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 76 tatagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaa 135
Query: 135 cggagggagta 145
|||||| ||||
Sbjct: 136 cggaggaagta 146
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 133 bits (67), Expect = 8e-31
Identities = 112/126 (88%), Gaps = 7/126 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattgatgttaat------aga 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| ||||||||||||||||||||||| |||
Sbjct: 66 ttcat-taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 124
Query: 140 ggagta 145
||||||
Sbjct: 125 ggagta 130
Score = 119 bits (60), Expect = 1e-26
Identities = 109/126 (86%), Gaps = 7/126 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 62
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||||||| ||||| || ||||||||| |||||||||| |||
Sbjct: 61 -----ttaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagag 7
Query: 140 ggagta 145
| ||||
Sbjct: 6 gaagta 1
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 133 bits (67), Expect = 8e-31
Identities = 113/126 (89%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||
Sbjct: 127 tttcacaatataagtcattctactatttcctacattcatattgatgttaat--atctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 69 ttcat-taacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || | |||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 76 t--at-taacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggag 132
Query: 140 ggagta 145
| ||||
Sbjct: 133 gaagta 138
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 131 bits (66), Expect = 3e-30
Identities = 117/133 (87%), Gaps = 7/133 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctaga 75
Query: 79 -attgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtga 132
|| || || ||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 76 catatatattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 135
Query: 133 aacggagggagta 145
||||| |||||||
Sbjct: 136 aacggggggagta 148
Score = 129 bits (65), Expect = 1e-29
Identities = 117/134 (87%), Gaps = 9/134 (6%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa------ 73
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatatata 78
Query: 74 --tctagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtg 131
|||||||| || | |||| ||||| |||||| |||||| |||||||||||||||||||
Sbjct: 77 tgtctagattcat-taacattaatataaatgtgggaaatgctagaatgacttacattgtg 19
Query: 132 aaacggagggagta 145
||||||||| ||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 113/129 (87%), Gaps = 5/129 (3%)
Strand = Plus / Minus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctagattg 82
||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagatct 73
Query: 83 atgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
| || ||||||||||||||||| |||||| || ||||||||||||| ||||||||
Sbjct: 72 agattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacgg 13
Query: 138 agggagtag 146
|||||||||
Sbjct: 12 agggagtag 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 110/131 (83%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 135 cggagggagta 145
|||||| ||||
Sbjct: 136 cggaggaagta 146
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 113/129 (87%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctagattg 82
||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagatct 78
Query: 83 atgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
| || ||||||||||||||||| |||||| || ||||||||||||| ||||||||
Sbjct: 79 agattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacgg 138
Query: 138 agggagtag 146
|||||||||
Sbjct: 139 agggagtag 147
Score = 93.7 bits (47), Expect = 7e-19
Identities = 110/131 (83%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctaga 76
Query: 80 ttgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 135 cggagggagta 145
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 129 bits (65), Expect = 1e-29
Identities = 112/126 (88%), Gaps = 5/126 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat----atttatctaaa 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | | |||||||| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 69 tttat-taatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 123 bits (62), Expect = 7e-28
Identities = 110/126 (87%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaatttaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || ||||||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 76 taaat-----atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 130
Query: 140 ggagta 145
| ||||
Sbjct: 131 gaagta 136
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 127 bits (64), Expect = 5e-29
Identities = 97/108 (89%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 38 tctagcatttcccacattcatattgatgttaatgaatctagattgatgttacatcaatat 97
|||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctagatagat-----atcaatat 89
Query: 98 gaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| || |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 90 gaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 115 bits (58), Expect = 2e-25
Identities = 112/127 (88%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||| |||||||||||| || |||||||
Sbjct: 126 tttcacaatgtaagtcattctagcatttcccatattcatattgat----atctatctaga 71
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatg-acttacattgtgaaacgga 138
|| || | ||||||||||||||||| ||||||||||| | |||||||||||||||||||
Sbjct: 70 ttcat-taacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaacgga 12
Query: 139 gggagta 145
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 127 bits (64), Expect = 5e-29
Identities = 118/136 (86%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 77
||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatctatg 75
Query: 78 -------gattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgt 130
| || || | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 76 tgacatagtttcat-taacatcaatatgaatgtgagaaatgctagaatgacttacattgt 134
Query: 131 gaaacggagggagtag 146
||||| ||||||||||
Sbjct: 135 gaaaccgagggagtag 150
Score = 111 bits (56), Expect = 3e-24
Identities = 116/136 (85%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatc---- 75
||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaaactatg 79
Query: 76 -----tagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgt 130
|||||| || | ||||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 78 tcacatagattcat-taacatcaatatgaatgtggaaaatgctagaatgacttacattat 20
Query: 131 gaaacggagggagtag 146
|||||||||| |||||
Sbjct: 19 gaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 127 bits (64), Expect = 5e-29
Identities = 115/130 (88%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| || ||| |||||||||||||| ||||||||
Sbjct: 134 tttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatctaga 75
Query: 80 ttgatgt---ta-catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
| ||| | || |||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 74 tagatctatctatcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 136 ggagggagta 145
||||| ||||
Sbjct: 14 ggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 115/131 (87%), Gaps = 6/131 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgtta-----atgaat 74
||||||||| ||||||||| |||||||||||||||||||||||||| || || ||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatgatagatagatctat 75
Query: 75 ctagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
||||||| || | |||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 76 ctagatttat-taacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 135 cggagggagta 145
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 127 bits (64), Expect = 5e-29
Identities = 120/139 (86%), Gaps = 11/139 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctaga 75
Query: 80 ttgatgt-ta----------catcaatatgaatgtgagaaatgttagaatgacttacatt 128
| |||| || ||||||||||||||| |||||| |||||||||||| |||
Sbjct: 76 tatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatatt 135
Query: 129 gtgaaacggagggagtagt 147
|||||||||||||||||||
Sbjct: 136 gtgaaacggagggagtagt 154
Score = 121 bits (61), Expect = 3e-27
Identities = 119/137 (86%), Gaps = 11/137 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 141 tttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctaga 82
Query: 80 --------ttgat--gtta-catcaatatgaatgtgagaaatgttagaatgacttacatt 128
| ||| ||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 81 catatatctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 129 gtgaaacggagggagta 145
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 127 bits (64), Expect = 5e-29
Identities = 110/126 (87%), Gaps = 7/126 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 123 tttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatcaaga 64
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 63 -------tacatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggat 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 109/127 (85%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| | |||||| |||||||||||||||||| |||| ||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgt------atcttga 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct: 70 ttcat-taacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 140 ggagtag 146
| |||||
Sbjct: 129 gaagtag 135
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 125 bits (63), Expect = 2e-28
Identities = 111/126 (88%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 128 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| | | ||| || |||||| || |||||| |||||||||||||||| ||||||||||
Sbjct: 68 --caagattcattaacatgaatatgggaaatgctagaatgacttacattatgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 110/127 (86%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt-taatgaatctag 78
||||| ||| |||||||||||||||||||||| |||||| || ||| | || |||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcccatattcatgttaatgaatcttg--tctag 73
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | |||||||||||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 74 attcat-taacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 132
Query: 139 gggagta 145
|||||||
Sbjct: 133 gggagta 139
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 114/131 (87%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || | |||||||| ||| || ||||| ||||||||||||||||||||||
Sbjct: 76 tgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaa 135
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 136 cggagggagta 146
Score = 123 bits (62), Expect = 7e-28
Identities = 110/125 (88%), Gaps = 7/125 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 77
||||||||| |||||||||||||||||| ||| ||| |||||||| ||||||||||||
Sbjct: 135 tttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatctaca 76
Query: 78 ----gattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 133
|||| || | |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 75 tctagattcat-taacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 134 acgga 138
|||||
Sbjct: 16 acgga 12
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 125 bits (63), Expect = 2e-28
Identities = 111/126 (88%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| | | ||| || |||||| || |||||| |||||||||||||||| ||||||||||
Sbjct: 76 --caagattcattaacatgaatatgggaaatgctagaatgacttacattatgaaacggag 133
Query: 140 ggagta 145
| ||||
Sbjct: 134 gaagta 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 110/127 (86%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt-taatgaatctag 78
||||| ||| |||||||||||||||||||||| |||||| || ||| | || |||||
Sbjct: 128 tttcataatgtaagtcattctagcatttcccatattcatgttaatgaatcttg--tctag 71
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | |||||||||||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 70 attcat-taacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 139 gggagta 145
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 117/137 (85%), Gaps = 11/137 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 141 tttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctaga 82
Query: 80 ttgatg-----------ttacatcaatatgaatgtgagaaatgttagaatgacttacatt 128
|||| | ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 81 cagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacatt 22
Query: 129 gtgaaacggagggagta 145
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 118/138 (85%), Gaps = 11/138 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctaga 75
Query: 80 --------ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacatt 128
| ||| | ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 76 catctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacatt 135
Query: 129 gtgaaacggagggagtag 146
|||||||||||||||||
Sbjct: 136 atgaaacggagggagtag 153
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 125 bits (63), Expect = 2e-28
Identities = 110/126 (87%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 124 tttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctaga 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | |||||||||||| |||||| |||||||||||||||||||||| ||||
Sbjct: 64 catatat------aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 111/126 (88%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||| || | ||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-atat--atg--tctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | | || |||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 71 ttcat-taatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 129
Query: 140 ggagta 145
| ||||
Sbjct: 130 gaagta 135
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 123 bits (62), Expect = 7e-28
Identities = 103/116 (88%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 30 taagtcattctagcatttcccacattcatattgatgttaatgaatctagattgatgttac 89
|||||||||||| ||||| |||||||| ||| ||||||| |||||||||| || ||
Sbjct: 117 taagtcattctaacattttccacattcgtatggatgttagtgaatctagacatat---ac 61
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 60 atccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 107/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||| |||||| ||||||||||| ||||| ||| ||||||
Sbjct: 16 tttcataatgtaagtcattctaacatttctcacattcatatggatgtatatg--tctaga 73
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | | ||||| ||| ||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 74 ttcac-taacatccatacgaatgtggaaaatgttagaatgacttacattataaaacggag 132
Query: 140 ggagta 145
||||||
Sbjct: 133 ggagta 138
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 111/126 (88%), Gaps = 5/126 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat----atttatctaaa 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | | |||||||| |||||| ||||| |||||||||||||||||||||||||||
Sbjct: 69 tttat-taatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 109/126 (86%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||||||| |||||||| ||||| ||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatttatattgatattaataaatttaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || ||||||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 76 taaat-----atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 130
Query: 140 ggagta 145
| ||||
Sbjct: 131 gaagta 136
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|||||| | | |||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 76 -------aacatcactgtaaatgtgggaaatgttagaatgacttccattatgaaacggag 128
Query: 140 ggagtag 146
| |||||
Sbjct: 129 gaagtag 135
Score = 103 bits (52), Expect = 7e-22
Identities = 103/119 (86%), Gaps = 7/119 (5%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagattgatgttaca 90
||||||||||| ||||||||||||| | | ||||||| |||||||| || | |||
Sbjct: 112 aagtcattctaacatttcccacatttacagtgatgtt------tctagattcat-taaca 60
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagttg 149
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtagttg 1
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 119 bits (60), Expect = 1e-26
Identities = 120/142 (84%), Gaps = 16/142 (11%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagc 75
Query: 79 ----attgatgtt-----------acatcaatatgaatgtgagaaatgttagaatgactt 123
| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 76 acatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 135
Query: 124 acattgtgaaacggagggagta 145
||||||||||||||||||||||
Sbjct: 136 acattgtgaaacggagggagta 157
Score = 109 bits (55), Expect = 1e-23
Identities = 119/143 (83%), Gaps = 18/143 (12%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat----- 74
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaaa 87
Query: 75 ------------ctagattgatgttacatcaatatgaatgtgagaaatgttagaatgact 122
||||||| || | ||||||||||||||||| |||||| ||||||||||
Sbjct: 86 catatgtatgtgctagattcat-taacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 123 tacattgtgaaacggagggagta 145
|||||||||||||||||| ||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 120/144 (83%), Gaps = 17/144 (11%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 80 ttgat-----------------gttacatcaatatgaatgtgagaaatgttagaatgact 122
| ||| | ||||||||||||||||| ||||| |||||||||||
Sbjct: 76 tagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgact 135
Query: 123 tacattgtgaaacggagggagtag 146
|||||||||||||||||| |||||
Sbjct: 136 tacattgtgaaacggaggaagtag 159
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 119 bits (60), Expect = 1e-26
Identities = 108/126 (85%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagt----- 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 64 ------taacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/126 (83%), Gaps = 11/126 (8%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaactcat----- 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 71 ------taacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 124
Query: 140 ggagta 145
| ||||
Sbjct: 125 gaagta 130
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 117 bits (59), Expect = 5e-26
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || | |||||||| ||| || ||||| || |||||||||||||||||||
Sbjct: 76 tgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaa 135
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 136 cggagggagta 146
Score = 115 bits (58), Expect = 2e-25
Identities = 109/125 (87%), Gaps = 7/125 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 77
||||||||| ||||||||| |||||||| ||| ||| |||||||| ||||||||||||
Sbjct: 135 tttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatctaca 76
Query: 78 ----gattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 133
|||| || | |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 75 tctagattcat-taacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 134 acgga 138
|||||
Sbjct: 16 acgga 12
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 117 bits (59), Expect = 5e-26
Identities = 112/129 (86%), Gaps = 3/129 (2%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||
Sbjct: 133 tttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaatctaga 74
Query: 80 ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 136
| || | |||||| ||||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 73 tatatatattaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacg 14
Query: 137 gagggagta 145
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 110/130 (84%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat----c 75
||||| ||| |||||||||||||||||| |||||||||| |||||||||| || |
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacattcatagtgatgttaatatatatatc 75
Query: 76 tagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
|||||| || | |||||| |||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 76 tagatttat-taacatcactatgaatgtgggaaatactagaatgacttacattatgaaac 134
Query: 136 ggagggagta 145
|||||||||
Sbjct: 135 agagggagta 144
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 147 tttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 7e-25
Identities = 119/142 (83%), Gaps = 17/142 (11%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatct--- 76
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctgga 86
Query: 77 -------------agattgatgttacatcaatatgaatgtgagaaatgttagaatgactt 123
||||| || | ||||||||||||||||| |||||| |||||||||||
Sbjct: 85 catatgcctatctagattcat-taacatcaatatgaatgtgggaaatgctagaatgactt 27
Query: 124 acattgtgaaacggagggagta 145
||||||||||||||||||||||
Sbjct: 26 acattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 101 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtagt 160
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 113 bits (57), Expect = 7e-25
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatctaga 57
Query: 80 t 80
|
Sbjct: 56 t 56
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 70 acatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttc 48
||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 112/127 (88%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgtta-atgaatctag 78
||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||||
Sbjct: 128 tttcacaatataagtcattttagcattttccacattcatattgatgctatatg--tctag 71
Query: 79 attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||| || | ||||||||| ||| ||||||||| || |||||||||||||||||||||||
Sbjct: 70 attcat-tagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgga 12
Query: 139 gggagta 145
|| ||||
Sbjct: 11 ggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 109/126 (86%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| ||||||||| || ||| ||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | |||||||||||||||| ||||| || ||||||||| ||||||||||||||
Sbjct: 76 c--atatagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggag 133
Query: 140 ggagta 145
||||||
Sbjct: 134 ggagta 139
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 111 bits (56), Expect = 3e-24
Identities = 95/108 (87%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 26 aatataagtcattctagcatttcccacattcatattgatgttaatgaatctagattgatg 85
||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 86 tt-----acatcaatatgaatgtgagaaatgttagaatgacttacatt 128
|| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 48 ttcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/101 (87%), Gaps = 7/101 (6%)
Strand = Plus / Plus
Query: 30 taagtcattctagcatttcccacattcatattgatgttaatgaa------tctagattga 83
||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaatatatgtctagattca 64
Query: 84 tgttacatcaatatgaatgtgagaaatgttagaatgactta 124
| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 65 t-tagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 88
Score = 107 bits (54), Expect = 4e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 101 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagt 160
Query: 148 tg 149
||
Sbjct: 161 tg 162
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 111 bits (56), Expect = 3e-24
Identities = 110/128 (85%), Gaps = 5/128 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 125 tttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatctaga 66
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||| |||||||| |||||| ||||||||||||||||||||
Sbjct: 65 -----ctagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggag 11
Query: 140 ggagtagt 147
| ||||||
Sbjct: 10 gaagtagt 3
Score = 83.8 bits (42), Expect = 6e-16
Identities = 107/127 (84%), Gaps = 5/127 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||| ||||||| ||||| || ||||||||||||| || | |||||
Sbjct: 16 tttcacaatgtaagtaattctagtatttctcatattcatattgatgctagt----ctaga 71
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 72 ttcat-tagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacggag 130
Query: 140 ggagtag 146
|||||||
Sbjct: 131 ggagtag 137
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 111 bits (56), Expect = 3e-24
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 120 acttacattgtgaaacggagggagta 145
||||||||||||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 109/127 (85%), Gaps = 11/127 (8%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatctag- 74
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||| ||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 75 --------aca--aatatgaatgtgagaaatgctagaatgacttacattatgaaatggag 124
Query: 140 ggagtag 146
|||||||
Sbjct: 125 ggagtag 131
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatactagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 111 bits (56), Expect = 3e-24
Identities = 106/124 (85%), Gaps = 9/124 (7%)
Strand = Plus / Plus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctagattg 82
|||||| ||||||||| |||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctaga--- 75
Query: 83 atgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 142
|||||||||||||||| |||||| ||||||| |||||||||||||||||||| |
Sbjct: 76 ------catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaa 129
Query: 143 gtag 146
||||
Sbjct: 130 gtag 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 106/126 (84%), Gaps = 9/126 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 tttcacaatgtaagacattctagcatttcccacattcatattgatg--------tctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||||||| ||| || |||||| || |||||||||||||||| |||||||
Sbjct: 69 ttcat-tagcatcaatataaatatgggaaatgctataatgacttacattgtggaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 111 bits (56), Expect = 3e-24
Identities = 114/132 (86%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 136 tttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctaga 77
Query: 79 ----attgatgtt-acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 133
||| || || |||||||||| ||||||| |||| || ||||||||||||||||||
Sbjct: 76 caacattaatattaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaa 17
Query: 134 acggagggagta 145
|| |||||||||
Sbjct: 16 acagagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 90 acatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagta 147
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 109 bits (55), Expect = 1e-23
Identities = 106/127 (83%), Gaps = 17/127 (13%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatct--- 72
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 73 --------------atatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 118
Query: 140 ggagtag 146
|||||||
Sbjct: 119 ggagtag 125
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 109/126 (86%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||||| | |||||||||||||| |||||| |
Sbjct: 128 tttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatctata 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||| | |||||||| | ||||| ||||| || ||||||||||||||||||| ||||
Sbjct: 68 tagatact--atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||||||| | |||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 82 acatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggagtagt 141
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 109 bits (55), Expect = 1e-23
Identities = 120/143 (83%), Gaps = 14/143 (9%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctaga 75
Query: 80 ttgatgt----ta----------catcaatatgaatgtgagaaatgttagaatgacttac 125
| ||| | || |||||||||||||||| |||||| | |||||||||||
Sbjct: 76 tagatatagtctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttac 135
Query: 126 attgtgaaacggagggagtagtt 148
||| |||||||||||||||||||
Sbjct: 136 attatgaaacggagggagtagtt 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| ||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||| | ||||||||||||||||||||||| |||| |||||||
Sbjct: 144 tttcataatgtaagtcattccaccatttcccacattcatattgatgccaatggatctaga 85
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 115/137 (83%), Gaps = 11/137 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 141 tttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtttaga 82
Query: 80 ttgat-----------gttacatcaatatgaatgtgagaaatgttagaatgacttacatt 128
| ||| | |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 81 tagatacatatgtctagatacatcaatatgaatgtggaaaatgctagaatgacttacatt 22
Query: 129 gtgaaacggagggagta 145
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggagggagtag 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 120/144 (83%), Gaps = 17/144 (11%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctaga 75
Query: 80 ttgatgt----------------ta-catcaatatgaatgtgagaaatgttagaatgact 122
| ||| | || |||||||||||||||| ||||||||||||||||
Sbjct: 76 tagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgact 135
Query: 123 tacattgtgaaacggagggagtag 146
||||||||||||||||||||||||
Sbjct: 136 tacattgtgaaacggagggagtag 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctaga 88
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 107 bits (54), Expect = 4e-23
Identities = 108/126 (85%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatgtaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| | ||||||||||||| ||| |||| || ||||||||||||| ||||||||||
Sbjct: 76 tag-----tcatcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggag 130
Query: 140 ggagta 145
||||||
Sbjct: 131 ggagta 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| ||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 147 tttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctaga 88
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 92 caatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct: 147 tttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctaga 88
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%), Gaps = 10/137 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta-- 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 16 tttcacaatataagtcattctattatttcccacattcatattgatgttaatgaaactaca 75
Query: 78 --gattgatgtt------acatcaatatgaatgtgagaaatgttagaatgacttacattg 129
||| | ||| |||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 76 tctatttaagtttcattaacatcaatataaatgtgggaaatactagaatgacttacattg 135
Query: 130 tgaaacggagggagtag 146
||||||||||| |||||
Sbjct: 136 tgaaacggaggaagtag 152
Score = 103 bits (52), Expect = 7e-22
Identities = 115/136 (84%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatct-ag 78
||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| || |
Sbjct: 140 tttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaacttaa 81
Query: 79 attgatgtt---------acatcaatatgaatgtgagaaatgttagaatgacttacattg 129
|| ||||| ||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 80 atagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttatattg 21
Query: 130 tgaaacggagggagta 145
||||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 105 bits (53), Expect = 2e-22
Identities = 110/129 (85%), Gaps = 10/129 (7%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||| |||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgatgtta-tgaatctaaa 74
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 75 ---------catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 125
Query: 140 ggagtagtt 148
| |||||||
Sbjct: 126 gaagtagtt 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 107/126 (84%), Gaps = 10/126 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatattgatgtt--------taga 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || ||||||||||||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 68 ttcata--acatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 105 bits (53), Expect = 2e-22
Identities = 108/126 (85%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatcta-- 73
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | ||||||| |||||||||| ||||| || ||||||||| ||||||||||||||
Sbjct: 74 --catataacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggag 131
Query: 140 ggagta 145
| ||||
Sbjct: 132 gaagta 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 105/123 (85%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||| ||||||||| ||||||||| || ||||
Sbjct: 126 tttcacaatataagtcattttagcatttttcacattcatgttgatgttat---atgtaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | | |||||||| || ||||||||| |||||||||||| ||||||||||||||
Sbjct: 69 ttcat-taatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 140 gga 142
|||
Sbjct: 10 gga 8
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 87 tacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 63 tacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Query: 147 t 147
|
Sbjct: 3 t 3
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 113 tagaatgacttacattgtgaaacggagggagtagt 147
|||| ||||||||||||||||||||||||||||||
Sbjct: 79 tagattgacttacattgtgaaacggagggagtagt 113
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 86
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 99 acatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 16 tttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||
Sbjct: 147 tttcacaatataagccattctagcatttttcacatttatattgatgataatgaatctaga 88
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||| |||||||||||| |||||| || ||||||||| ||||||||||||||| |||||
Sbjct: 62 acataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 147 tttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctaga 75
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||| |||||||||||| |||||| || ||||||||| ||||||||||||||| |||||
Sbjct: 101 acattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctaga 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctaga 88
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 101 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag 78
||||||||| || |||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 16 tttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctag 74
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 151 tttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctaga 92
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 105 acatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagt 164
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 95 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||| || |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 tttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctaga 79
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| || |||||| || ||||||||| ||||||||||||||||||||
Sbjct: 92 acatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/61 (86%), Gaps = 7/61 (11%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtc-ttctagcatttcccac------attgatgttaatgaatctaga 68
Query: 80 t 80
|
Sbjct: 69 t 69
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctaga 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 103 bits (52), Expect = 7e-22
Identities = 106/126 (84%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatc---- 64
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 63 -------tacatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||| || ||||||||| ||||||||||||||| ||||
Sbjct: 73 acatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggaggaagta 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||||||| ||||||||| | | |||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 107/126 (84%), Gaps = 7/126 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||| ||||||||||| ||| ||||||||| |||||||||||||||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatctaga 64
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || | ||||||||||| ||||| |||||||||||||||| ||||||||||
Sbjct: 63 tgaatat-------atatgaatgtggaaaatgatagaatgacttacattatgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||| || ||||| ||||| |||||||||||||||||||||| ||||
Sbjct: 77 acattaatatgaatatggaaaatgctagaaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 101 bits (51), Expect = 3e-21
Identities = 114/137 (83%), Gaps = 11/137 (8%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtttaga 75
Query: 80 ttgat-----------gttacatcaatatgaatgtgagaaatgttagaatgacttacatt 128
| ||| | ||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 76 tagatacatatgtctagatacatcaatatgaatatggaaaatgctagaatgacttacatt 135
Query: 129 gtgaaacggagggagta 145
|||||||||||| ||||
Sbjct: 136 gtgaaacggaggaagta 152
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||||||| |||||||||||||||||| ||| ||||||||||||||
Sbjct: 141 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 22 tcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagat 87
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggagggagtag 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 142
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctaga 88
Score = 89.7 bits (45), Expect = 1e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 142
||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
Score = 65.9 bits (33), Expect = 1e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattga 63
||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatntctcacattcatattga 59
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggagagagtag 4
Score = 101 bits (51), Expect = 3e-21
Identities = 111/129 (86%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaaa 75
Query: 80 ttgat---gttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 136
|| | | ||| || || ||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 76 catatctagattcattaacatcaatatga-aaatgctagaatgacttacattgtgaaacg 134
Query: 137 gagggagta 145
||| |||||
Sbjct: 135 gagagagta 143
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 107/126 (84%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatctaga 60
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
||| |||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 59 ---------cat--atatgaatgtgagaaatgctagaataacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacggaaggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||||||||||||||||||||||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 106/127 (83%), Gaps = 12/127 (9%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa------ 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|||||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 70 ------ttacatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Query: 140 ggagtag 146
||||||
Sbjct: 124 agagtag 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||||||||||| || ||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtagt 3
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 101 acattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctaga 88
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||| || | |||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 acatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||| ||||| |||||||| | ||||| ||||||||| |||||||| ||||
Sbjct: 135 tttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaatttaga 76
Query: 80 tt--gatg--tta-catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| ||| ||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 109/131 (83%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctaga 75
Query: 80 ttgatgtt-----acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || ||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 112 tttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatctaga 53
Query: 80 t 80
|
Sbjct: 52 t 52
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 66 acatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggagtagt 125
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 4e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 62
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagat 50
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/131 (86%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||| ||||
Sbjct: 135 tttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaatttaga 76
Query: 80 tt--gatg--tta-catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| ||| ||| ||||||||| ||| ||| |||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 109/131 (83%), Gaps = 5/131 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||| |||| || ||| ||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatctaga 75
Query: 80 ttgatgtta-----catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 134
| | || ||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 135 cggagggagta 145
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatctaga 45
Query: 80 t 80
|
Sbjct: 44 t 44
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcat 45
||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 108/130 (83%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg----ttaatgaatc 75
||||||||| ||||||||||||| ||||| |||||||||||||||| || ||
Sbjct: 16 tttcacaatgtaagtcattctagtatttctcacattcatattgatgacttttcccatatt 75
Query: 76 tagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
| |||||||| ||||||||| ||||||| |||||||| ||||||||||||| ||||||
Sbjct: 76 catattgatgt--catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaac 133
Query: 136 ggagggagta 145
|||||||||
Sbjct: 134 agagggagta 143
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||| | || ||||||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatataga 88
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 4e-20
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga 49
Score = 93.7 bits (47), Expect = 7e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 64
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctaga 88
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 118 tttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctaga 59
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 72 acatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagtag 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 120 acttacattgtgaaacggagggagta 145
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 109/128 (85%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||| | |||||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 129 tttcataatataagactttctagcattacccatattcatatagatgctaatgaatctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||| |||||||| |||| |||| ||||| |||||| ||| |||||| |||
Sbjct: 69 ttcat-taacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagag 11
Query: 140 ggagtagt 147
| ||||||
Sbjct: 10 gaagtagt 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||||| |||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 16 tttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||| |||||||| || | |||| ||||| | |||| ||| ||||||||||
Sbjct: 76 ttcat-tagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggag 134
Query: 140 ggagta 145
||||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/59 (93%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 101 acatcaatataaatgtga--aatgctagaatgacttacattgtgaaacggagggagtag 157
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||
Sbjct: 145 tttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 90
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctaga 75
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 92 caatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||| |||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 caatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatattgatattaatgaatcta 90
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||| ||||| |||||||||||| |||||| |||||||||||||
Sbjct: 103 atcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 145 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctaga 86
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 99 acatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 157
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/59 (93%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 acatcaatataaatgtga--aatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 71
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/126 (83%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatctaga 60
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||| ||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 59 tagat-----------atgaatgtgagaaatactagaatgacttacattgttaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| | |||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 73 acatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 95.6 bits (48), Expect = 2e-19
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctaga 75
Query: 80 ttgatgt-tacatc---aatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
|| | | ||| | |||||||||| |||||| |||||||||||||||||| ||||
Sbjct: 76 catatatatctatctagattatgaatgtgggaaatgctagaatgacttacattgtaaaac 135
Query: 136 ggagggagta 145
||||| ||||
Sbjct: 136 ggaggaagta 145
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 62 acatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/126 (83%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 119 tttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatctaga 60
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||| ||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 59 tagat-----------atgaatgtgggaaatgctagaatgacttatattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 107/127 (84%), Gaps = 11/127 (8%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcat----------atctatctaga 65
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||||||| ||||| ||||||| |||||||| ||||||||||
Sbjct: 66 ttcat-taacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 140 ggagtag 146
| |||||
Sbjct: 125 gaagtag 131
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtagt 3
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg 65
||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 101 tgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| |||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 24 acaatataagtcattctagcatttcccaca 53
||||| ||| ||||||||||||||||||||
Sbjct: 92 acaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 74
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 103 tttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 57 acatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcat 58
||||||||| |||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 93.7 bits (47), Expect = 7e-19
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 34 tcattctagcatttcccacattcatattgatgttaatgaatctagattgatgttacatca 93
|||||||||||||||||||||||||||||||| ||||||||| |||| || | |||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc--gattcat-tagcatca 31
Query: 94 atatgaatgtgagaaatgttagaatgactt 123
||||||||||| |||||| |||||||||||
Sbjct: 30 atatgaatgtgggaaatgctagaatgactt 1
Score = 93.7 bits (47), Expect = 7e-19
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagattgatgttaca 90
||||||||||||||||||||||||||||||||||| ||||||||| |||| || | ||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc--gattcat-tagca 57
Query: 91 tcaatatgaatgtgagaaatgttagaatga 120
|||||||||||||| |||||| ||||||||
Sbjct: 58 tcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 106/126 (84%), Gaps = 11/126 (8%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| || |
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaatatata 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || |||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 76 t--at---------atatgaatatggaaaatgctagaatgacttacattgtgaaacggag 124
Query: 140 ggagta 145
||||||
Sbjct: 125 ggagta 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 92 caatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 58 caatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||| |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 102 catcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggagggagtag 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||||||||||||| | || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctaga 75
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| ||||||||| ||||| |||||||||| |||||||||||||
Sbjct: 147 tttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctaga 88
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 95 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 102 catcaatatgaatatgagaaatgttagaatgacttatattgtggaacggagggagtag 159
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 23 cacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||||||||||||| |||||| || ||||||||||||| |||||||||||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatcta 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagtt 148
||||||||||||| || |||| |||||||||||| | |||| |||||||| |||||||
Sbjct: 61 catcaatatgaatatggaaaatactagaatgacttatactgtggaacggaggaagtagtt 2
Query: 149 g 149
|
Sbjct: 1 g 1
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 100 acatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagta 157
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 146 tttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctaga 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||| | ||||| ||||||||||| ||||||||||||||
Sbjct: 59 atcaatatgaatgtgggaaaact-agaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgactt 123
||||||||||||||||| |||||| |||||||||||
Sbjct: 36 acatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgactt 123
||||||||||||||||| |||||| |||||||||||
Sbjct: 88 acatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatcta 90
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 101 acatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 62 acatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||| | ||||||||| || |||||| ||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagtagt 3
Query: 148 tg 149
||
Sbjct: 2 tg 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 73
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 114 agaatgacttacattgtgaaacggagggagtag 146
|||||||||| |||||||||||| |||||||||
Sbjct: 69 agaatgacttgcattgtgaaacgaagggagtag 101
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 116/142 (81%), Gaps = 17/142 (11%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatga------- 72
||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttaga 75
Query: 73 ---------atctagattgatgttacatcaatatgaatgtgagaaatgttagaatgactt 123
||||||||| || | |||| | ||||||||||| ||||| |||||||||||
Sbjct: 76 catatatatatctagattcat-taacatgagtatgaatgtgaaaaatgctagaatgactt 134
Query: 124 acattgtgaaacggagggagta 145
||||||||||||||||||||||
Sbjct: 135 acattgtgaaacggagggagta 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctaga 86
Query: 80 t 80
|
Sbjct: 85 t 85
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 95 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| |||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 55 tatgaatgtgggaaatgccagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 71 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 127
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||| ||| ||||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 115 tttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||| | | ||||||||||||| |||||||||||||
Sbjct: 147 tttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctaga 88
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 75 catcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggagta 131
Score = 85.7 bits (43), Expect = 2e-16
Identities = 103/123 (83%), Gaps = 10/123 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| ||||| ||| |||||||||||| ||||||||||||
Sbjct: 120 tttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatctagt 61
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| |||| ||||||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 60 t---------atca-tatgaatttgagaaatgatagaatgacttatattgtgaaacggag 11
Query: 140 gga 142
|||
Sbjct: 10 gga 8
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 16 tttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||| ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 acattaatataaatatgggaaatgttagaatgacttacattgtgaaacggagggagtagt 159
Query: 148 t 148
|
Sbjct: 160 t 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||| ||||||||| ||| ||||| |||||||||||||||||
Sbjct: 146 tttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctaga 87
Query: 80 t 80
|
Sbjct: 86 t 86
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 107/126 (84%), Gaps = 5/126 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 125 tttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctaga 66
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | || ||| |||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 65 --cattt---ataaatgtgaatgtgggaaatactagaataacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 107/126 (84%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||| ||||||| |||||||||||||| ||| || |||| ||||||
Sbjct: 16 tttcacaatgtaagttattctagtatttcccacattcacatttata--aatg--tctaga 71
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | |||||||||||||| || |||||| || |||||||| |||||||||||||||
Sbjct: 72 tttat-taacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggag 130
Query: 140 ggagta 145
| ||||
Sbjct: 131 gaagta 136
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatct 76
||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 16 tttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatct 72
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag 78
||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||||||||||
Sbjct: 145 tttcacaatataagtcattctaggattgcccacattcttatagatactaatgaatctag 87
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 113 tagaatgacttacattgtgaaacggagggagtag 146
|||||||||||| |||||||||||||||||||||
Sbjct: 124 tagaatgacttatattgtgaaacggagggagtag 157
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 140
||||| ||||||||||| | |||| |||||||||||| ||| |||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 89.7 bits (45), Expect = 1e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 19 ttttcacaatataagtcattctagcatttcccacattcatattga 63
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtg-aaacggagggagtagt 147
|||||||||||||| |||||| |||||||||||| |||||| ||||||||| ||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtagt 118
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctaga 88
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| |||||| || ||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||| ||||||||| | |||||||||||||| ||||||||||| |||||||||||
Sbjct: 16 tttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| |||||| |||||| | |||||||||| |||||||||||||||||||
Sbjct: 62 acatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| |||||| |||||| || |||||||||| |||||||||||||| ||||
Sbjct: 101 acatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 87.7 bits (44), Expect = 4e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 79 attgatgtta-catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
|||||||||| ||||||||| ||| ||||||||| || ||||||||||||||||||||||
Sbjct: 72 attgatgttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgg 13
Query: 138 agggagta 145
||||||||
Sbjct: 12 agggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 79 attgatgtta-catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
|||||||||| ||||||||| ||| ||||||||| || ||||||||| ||||||||||||
Sbjct: 55 attgatgttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacgg 114
Query: 138 agggagta 145
||| ||||
Sbjct: 115 aggaagta 122
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaa 69
||||||||||||||||||| ||||||||| || ||| |||||||||||||
Sbjct: 111 tttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaa 69
||||||||| ||||||||| ||||||||| || ||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 147 tttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctaga 88
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 103 atcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||| |||| | | |||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 103/126 (81%), Gaps = 15/126 (11%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat----- 61
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| ||||||| ||| |||||| |||||||||||||||||||||||||||
Sbjct: 60 ----------atatatatgaacgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagtt 148
|||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 71 atcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagtagtt 129
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 141 tttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctaga 82
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| |||||| ||||| || ||||||||| ||||||||||||||||||||
Sbjct: 96 catcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctaga 88
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 30 taagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 26 taagtcattctaacatttcccacattcatataggtgttaatgaatctagat 76
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||| ||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 56 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagtagt 3
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 97/116 (83%), Gaps = 9/116 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||
Sbjct: 121 tttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctag- 63
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 135
|||| ||||||||| | |||||| |||||||||||||||||||||||
Sbjct: 62 --------acatatatatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatat 60
||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 4e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattga 63
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagt 116
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||||||||||| |||| || |||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||||||| ||||||||| ||| |||| |||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattga 63
||||| ||| ||||||||||||| |||| ||||||||||||||
Sbjct: 105 tttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 105/126 (83%), Gaps = 11/126 (8%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| || ||||||| |||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 119 tttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctaga 60
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| || |||||||| ||||||||| || | |||||| |||||||||||||||
Sbjct: 59 t--at---------atatgaatatgagaaatgctaaattgactttcattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 73 acatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggagggagtag 131
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 62 acattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||| ||||||||||||||||||| |||||| ||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagtag 146
|||| ||||||||||||||||||| |||||| |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagtag 102
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 104/126 (82%), Gaps = 9/126 (7%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctag- 63
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|||| |||||||| | | |||| |||||||||||||||| ||||||||||
Sbjct: 62 --------acatatatatgaatataggtaatgctagaatgacttacattatgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| |||||||||||||||| ||||| ||||| ||||
Sbjct: 75 acatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggaggaagta 132
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg 65
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatatt 61
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| |||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||||||||||||| || |||||| |||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 6e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 103/126 (81%), Gaps = 13/126 (10%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga------- 68
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| ||||||||||||||||| ||||| || ||| | ||||||||||||||||||
Sbjct: 69 ------taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggag 122
Query: 140 ggagta 145
||||||
Sbjct: 123 ggagta 128
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaat 74
|||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 92 aagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 136
|||||||||||||||| |||||| || |||||||| ||||||| ||||
Sbjct: 58 catcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcat 58
||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 16 tttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 73
||||||||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 110 tttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 64 acatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| |||||| || ||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatatt 61
||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| || |||||||||| |||||||||| | ||||
Sbjct: 16 tttcataatgtaagactttctagcattgcctacattcatatagatgttaatgtgtataga 75
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||| ||||||||||| | |||| ||||| | |||||||| ||||||||||
Sbjct: 76 ttcat-taacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 140 ggagta 145
||||||
Sbjct: 135 ggagta 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 99/119 (83%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| ||||||||||||| |||||||||||||||| |
Sbjct: 129 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctata 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
|| | ||||| |||||||||| | |||| ||||| | |||||||| |||||||||
Sbjct: 69 cacat-taacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 112 tttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatga 72
||||| ||| ||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattttagcactttccacattcatattgatgttaatga 68
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| || || || ||||||||||||| ||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 102 catctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 74
||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaat 93
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||||||||||| ||||| | | |||||||| |||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatcta 73
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgat 64
||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 16 tttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||| |||||||| |||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 62 acatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||| ||||| || ||| ||||||||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| ||| |||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 61 catcaatataaatatgagaaatactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctaga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| |||||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||| ||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctaga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| |||||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctaga 88
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| ||||||| ||||| ||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatttaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||| || | |||| |||||||||||||||| ||||||||||||||||
Sbjct: 101 acatctatatgaatatgggtaatgctagaatgacttacattatgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||| ||||| | |||| |||||||||||||||| ||||||||||| |||||
Sbjct: 62 acatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatc 75
||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatc 71
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||| |||||| || ||||||||||||||||||||||||| ||||||
Sbjct: 54 atgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtagt 3
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||| ||||| || |||||||| |||| ||||||||||||||||
Sbjct: 99 acatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggagggagta 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct: 134 aagtcattttagcatttttcacattcatatagatgttaatgaatcta 88
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctaga 88
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 144
||||||||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 106 gaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| |||||||||||||||| ||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||| ||| |||||||||||||||||||| | |||||||| || |||| ||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatcta 73
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||| | |||| |||||||||||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgttggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| ||||||| |||| ||||||||||||| ||||
Sbjct: 147 tttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatttaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| |||||||||||||||| ||||||||||| ||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 86 ttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 34 ttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 24 acaatataagtcattctagcatttcccacattcatattgatgttaatga 72
||||||||||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 116 aatgacttacattgtgaaacggagggagta 145
||||||||| |||||||||||||| |||||
Sbjct: 34 aatgacttatattgtgaaacggagagagta 5
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 95 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcata 59
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 84 tttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 105 agaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttc 48
||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| |||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 99 aatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatat 60
||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatat 60
||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 137
|||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacatt 55
||||||||| ||||||||||||||||||||||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacatt 103
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 91 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||| || ||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattga 63
||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatt 46
|||||||||||||||||||||||||||
Sbjct: 93 tttcacaatataagtcattctagcatt 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagtagtt 148
|||| |||||||||||| ||||||||||||| | |||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagtagtt 107
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 106/127 (83%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatttaga 75
Query: 80 ttga-tgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
| | ||||| ||||||||||| | |||| ||||| | |||||||| |||||||||
Sbjct: 76 cacacagacacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 135
Query: 139 gggagta 145
|||||||
Sbjct: 136 gggagta 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| | |||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/126 (83%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||
Sbjct: 128 tttcacaatataagtcattctaggatttctctcatccatataattgttaatgaatctaga 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | | | | |||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 68 --catataataactctatgaatgtggaaaatactagaatgacttacattgtgaaacggag 11
Query: 140 ggagta 145
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| ||| ||||||| |||||||||||| ||||||||||||||| ||||||
Sbjct: 88 atatggatgagagaaatcctagaatgacttatattgtgaaacggaggaagtagt 141
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 100 atgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacat 54
||||||||| |||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| |||||||| ||||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| ||||| |||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| | |||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 62 acatcaatataattgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 117 atgacttacattgtgaaacggagggagtagt 147
|||||||||||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtagt 128
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 61 acatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 74
||||||||| |||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaatgaat 69
Score = 67.9 bits (34), Expect = 4e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 141
|||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacggaggg 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcattt 47
||||||||| ||||||||||||||||||
Sbjct: 101 tttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||| ||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 62 acatctatatcaatatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 97 tgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagttg 149
||||||||| ||||| || ||||||||||||| |||||| |||||||||||||
Sbjct: 110 tgaatgtgaaaaatgctacaatgacttacattatgaaacagagggagtagttg 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||| ||| ||||||||||||||||||| || ||| |||| ||||||| ||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatcta 73
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 125 tttcacaatataagactttctagcattacccacatacatatagatgttaatgaatcta 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||| ||||| | |||| ||||| | |||| |||||||||||||||||||||
Sbjct: 79 acatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagtag 137
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 16 tttcacaatataagactttctagcattacccacatacatatagatgttaatgaatcta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||| ||||| | |||| ||||| | |||| |||||||||||||||||||||
Sbjct: 62 acatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| || |||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 74 acatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 74
||||||||| |||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
||||| || ||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctaga 48
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 43 catttcccacattcatattgatgttaatgaatctaga 79
|||||||||||||||||||||||| ||||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctaga 41
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||| |||||||| ||| | ||||||||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatctaga 60
Query: 80 t 80
|
Sbjct: 59 t 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||| | |||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 73 acatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct: 102 catcaatatggatgtgaacaatagtagaatgacttacattatgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||| ||| ||||| |||||||||| |||||||||||||
Sbjct: 147 tttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| || | |||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||||||||||| | || |||||||||||||||| ||||||||||| |||||
Sbjct: 62 acatccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagtagtt 148
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagtagtt 161
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| | |||||||||| | |||||||||||||||||||||||||
Sbjct: 102 catctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | ||||| |||| ||||||||||||| |||| |||||||||||||
Sbjct: 147 tttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatctaga 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 40 tagcatttcccacattcatattgatgttaatgaatcta 77
||||||| ||||||||||||| |||| |||| ||||||
Sbjct: 36 tagcattacccacattcatatagatgctaataaatcta 73
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 102 catcgatatggatgtgaaaaatactagaatgacttacattatgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||| |||| ||||| ||||| |||| |||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||| | |||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 140 tataagactttctagcattgcccacattcatatagatgttaatgaatctagat 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaa 69
|||||| | |||||||||| ||||||||||||| ||||||||
Sbjct: 24 tataagactttctagcattacccacattcatatagatgttaa 65
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 74 tctagattgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 133
|||||||| || | ||||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 76 tctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaa 17
Query: 134 acggagggagta 145
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 102 acatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||||||||||||||| || | |||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctaga 75
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||||||||||| | || |||||||||||||||| ||||||||||| |||||
Sbjct: 101 acatccatatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagtagtt 148
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagtagtt 2
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagat 48
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctaga 66
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 141
|||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatat 60
||||||||||||||||||| || ||||| |||||||||||
Sbjct: 119 tttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 100 atgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| |||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtagt 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| |||||||||||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacat 54
||||| ||| |||||||||||||||||||||||||
Sbjct: 117 tttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||| ||||||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctaga 62
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctaga 88
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | ||| ||||| | |||||||||||||||||||||||||
Sbjct: 101 acatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 121 cttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||| | | |||| |||||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaatttaga 75
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| ||||||||||||| |||| ||| | | |||||||||||||||||||||||||||
Sbjct: 62 acatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagtagt 3
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| || |||||||| | ||||||| || | |||||||||||||||||||||||||||
Sbjct: 101 acatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagtagt 160
Query: 148 t 148
|
Sbjct: 161 t 161
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | | |||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | || || |||| |||||||||| || ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaatctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 123 tttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatctaga 64
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| ||||||||||| | |||| ||||| | |||||||||||||||||||| ||||||
Sbjct: 77 acatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtagt 136
Query: 148 t 148
|
Sbjct: 137 t 137
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 88
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||||| |||| || || | |||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 40 tagcatttcccacattcatattgatgttaatgaatctaga 79
||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 36 tagcattcctcacattcatatagatgttaatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| | |||||||| ||||||||||| ||||
Sbjct: 101 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 107 tataagactttctagcattgcccacattcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||||| |||| || || | |||||||| ||||||||||||||||
Sbjct: 101 acatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 40 tagcatttcccacattcatattgatgttaatgaatctaga 79
||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 127 tagcattgctcacattcatatagatgttaatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| | |||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||| |||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatctaga 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| |||||||| |||| |||| ||||| | |||||||| ||||||||||||||||||
Sbjct: 101 acatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggagggagtagt 160
Query: 148 t 148
|
Sbjct: 161 t 161
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 147 tttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | ||| ||||| |||||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 9e-12
Identities = 90/107 (84%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 40 tagcatttcccacattcatattgatgttaatgaatctagattgat-gttacatcaatatg 98
||||||| ||||||||||||| ||||||||||||| |||| | | ||||| |||||
Sbjct: 111 tagcattgcccacattcatatagatgttaatgaatttagacacacagacacatctatatg 52
Query: 99 aatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| | |||| ||||| | |||||||| ||||||||||||||||
Sbjct: 51 aatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgt 66
||||| ||| |||| | |||||||||| ||||||||||||| |||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| || || | ||||||| ||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggagggagta 142
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 105/128 (82%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 126 tttcataatgtaagttattctagcattgtccacattcatatagatgttaataaatcta-- 69
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| | |||| || |||||||| | |||| |||||| ||||||||| ||||||||||
Sbjct: 68 --gacatagcatctatgtgaatgtgggcaatgctagaataacttacattatgaaacggag 11
Query: 140 ggagtagt 147
| ||||||
Sbjct: 10 gaagtagt 3
Score = 69.9 bits (35), Expect = 9e-12
Identities = 106/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| ||||| ||||||||||| |||||||||| || |||| || || ||||||
Sbjct: 16 tttcataatgtaagttattctagcattgcccacattcacatagatgcta-tg--tctaga 72
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
|| || | ||||| ||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 73 tttat-taacatctatatgaatgtggacaatgctagaataacttacattatgaaacggag 131
Query: 140 ggagta 145
||||||
Sbjct: 132 ggagta 137
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagggagtagt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacatt 55
||||||||| |||||||||||||||||| |||||||
Sbjct: 105 tttcacaatgtaagtcattctagcattttccacatt 70
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagatt 81
|||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagatt 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagat 42
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaat 70
||||||||| ||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 116 aatgacttacattgtgaaacggagggagta 145
|||| |||||||||||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 113 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||| |||| || || | |||||||||||||||||||||||||
Sbjct: 109 atatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| | |||| ||||| | ||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||| ||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||
Sbjct: 147 tttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatcta 90
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||||| || |||| || ||||| ||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| | |||| || ||||||||||||| ||||||||||||||||
Sbjct: 102 catctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagtagtt 148
|||||||||||||||| ||||||||||| |||||||
Sbjct: 37 tagaatgacttacattatgaaacggaggaagtagtt 2
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| ||| ||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 100 atgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| |||| |||||||||||| ||||||||||| ||||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcattt 47
||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattctagtattt 43
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||||||||||||||||||| ||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcat 58
||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccaca 53
||||||||| |||||||||||||||||| |||||
Sbjct: 97 tttcacaatgtaagtcattctagcattttccaca 64
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| |||||||||||| ||||||||| ||||||||
Sbjct: 129 tttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaatctaga 70
Query: 80 ttgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 139
| |||||| |||||||| || |||| || || | |||||||||||||||||||
Sbjct: 69 caca-catacatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggag 11
Query: 140 ggagta 145
||||||
Sbjct: 10 ggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| ||||||||||| |||| ||||| | ||||||||||||||||||||||||||
Sbjct: 83 acatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggagtag 141
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 113 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctag 78
|||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||||||| |||||||||||| |||||||||||||||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctaga 51
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatcta 90
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||| | | |||| ||||| | |||||||||||||||||||||||||
Sbjct: 101 acatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| |||||||||| || |||| |||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 97 tgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||| | |||| ||||| | |||||||| ||||||||||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||| | |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 141 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 92
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| | |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 103 acatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctag 78
|||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctag 78
|||||||||| |||| |||||||| ||||||||||||||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctag 50
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 35 cattctagcatttcccacattcatattgatgttaatgaatctagat 80
||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagat 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 35 cattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctaga 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatg 119
||||||||||| ||||||||||||||
Sbjct: 77 atatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctag 78
|||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagat 52
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||| ||||||| |||| ||||||||||| |||||||||||||||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaat 70
||||||||| |||||||||||| |||| |||||| |||||||| |||||
Sbjct: 97 tttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| ||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatatt 61
||||||||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 129 tttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 93 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 116 aatgacttacattgtgaaacggagggagta 145
||||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatatt 61
||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 98 tttcacaatgtaagtcattttagtatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 113 tagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagta 94
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 100 atgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 23 cacaatataagtcattctagcatttcccacat 54
|||||| |||||||||||||||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 112 ttagaatgacttacattgtgaaacggagggagtagtt 148
||||||||||||||||| |||||||||||||||||||
Sbjct: 38 ttagaatgacttacattatgaaacggagggagtagtt 2
Score = 61.9 bits (31), Expect = 2e-09
Identities = 105/127 (82%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||||||||||| ||| |||| || ||||| ||| ||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaatctaga 75
Query: 80 ttgatgttacatcaatatgaatgtgaga-aatgttagaatgacttacattgtgaaacgga 138
| || ||| |||||||||| ||| |||| |||||||||||||||| |||||||||
Sbjct: 76 cttat-----atctatatgaatgt-agacaatgctagaatgacttacattatgaaacgga 129
Query: 139 gggagta 145
|| ||||
Sbjct: 130 ggaagta 136
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 1e-10
Identities = 110/135 (81%), Gaps = 8/135 (5%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag- 78
||||| ||| |||| | |||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 136 tttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaatctagt 77
Query: 79 ------attgatgttacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 132
||| || | ||||| | |||||||||| |||| ||||| | ||||||||||||
Sbjct: 76 gtctagattcat-taacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 133 aacggagggagtagt 147
|||||||| ||||||
Sbjct: 17 aacggaggaagtagt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| | |||||||| | ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgctcacattcacttagatgttaatgaatctaga 75
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 139 tataagactttctagcattgcccacattcatatagatgctaatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaa 73
|||||| | |||||||||| |||||| |||||| ||||||||||||
Sbjct: 24 tataagactttctagcattgcccacaatcatatagatgttaatgaa 69
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||| ||| |||| |||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||| || | ||| ||||| | |||||||||||||||||||||||||
Sbjct: 101 acatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctaga 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| |||| ||||| | |||||||| |||||| |||||||||
Sbjct: 75 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaacagagggagta 132
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| ||||||||||| | | ||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 96 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| | |||| ||||| | |||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| ||| || ||||| ||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaatcta 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 106 gaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||| |||||||||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 99 aatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||||| || ||||||||| ||| ||||||||| ||||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacggatggagtagt 93
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttc 48
||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacatt 55
||||| ||||||||||||| ||||||||| ||||||
Sbjct: 80 tttcataatataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 113 tataagactttctagcattacccacattcatatatatgttaatgaatctaga 62
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| |||| |||||| | ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctaga 75
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||| ||| ||||| | ||||| ||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaatcta 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 121 cttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||
Sbjct: 134 cttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctag 78
|||||| | |||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag 78
||||| ||| |||| | |||||||||| || | ||||||||||||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatctag 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| |||||||||||| |||||||||||||||||
Sbjct: 145 tttcataatgtaagactttctagcattgtccacattcatataaatgttaatgaatctaga 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||||||||| | | |||| ||||| | |||||||| ||||||||||||||||
Sbjct: 62 acatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||| |||| ||||| | |||||||| ||||||||||| ||||||
Sbjct: 105 atatgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagtagt 158
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
|||| ||||||||||| | |||| ||||| |||||||||||||||||||||||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtagt 122
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||||||||| | || | ||||| | |||||||||||||||||||| ||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg 65
||||||||| |||| | ||||||| || ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg 65
||||||||| |||| |||||||||| ||||||||||||| ||||
Sbjct: 109 tttcacaatgtaagagtttctagcattgcccacattcatatagatg 64
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagtag 146
|||||||||| | ||||||||||||||||||||||||||
Sbjct: 121 aatgttagaaagtcttacattgtgaaacggagggagtag 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatcta 77
|||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 33 ttctagcattacccacattcatttagatgttaatgaatcta 73
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||| |||||||| |||| |||| ||||| | |||||||||| |||||||||||||||
Sbjct: 51 acatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagtag 109
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctaga 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| | ||||||||||| ||||| ||||||||||||
Sbjct: 106 ttctagcatcacacacattcatatagatgtaaatgaatctaga 64
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagttg 149
||||| ||||| | |||| ||||| | |||||||||||||||||||| ||||||||
Sbjct: 56 atatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtagttg 1
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| |||| |||||| | |||| |||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaatctaga 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| | ||||| ||||| ||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaatcta 90
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||| ||||||| |||| ||||| | |||||||||||||||||||| ||||
Sbjct: 101 acatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 106 gaaatgttagaatgacttacattgtgaaacggag 139
|||||| |||||||||||||||||||||||||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggag 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacatt 55
||||||||| |||||||||||||||||||| |||||
Sbjct: 78 tttcacaatgtaagtcattctagcatttcctacatt 43
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagtag 146
|||||||||||||||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattc 56
||||||||| ||||||||||||||| || ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcactttccacattc 52
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 105 agaaatgttagaatgacttacattgtgaaacggagggagtag 146
||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacgaagggagtag 147
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 107 aaatgttagaatgacttacattgtgaaacggagggagta 145
||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccac 52
||||| |||||||||||||||||||||| ||||
Sbjct: 16 tttcataatataagtcattctagcattttccac 48
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagat 80
|||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 43 catttcccacattcatattgatgttaatgaatctaga 79
|||| ||||||||||||| |||||||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctaga 41
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatg 65
||||| |||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 113 tagaatgacttacattgtgaaacggagggagta 145
|||||||||||||||| ||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||| ||| || ||||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
|||||| | |||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 24 tataagactttctagaattgcccacattcatatagatgttaatgaatcta 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 48 cccacattcatattgatgttaatgaatcta 77
||||||||||||| ||||||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||| | |||||| ||| |||| |||||||| |||||||||||| |||||
Sbjct: 16 tttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | || ||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctaga 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 121 cttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||
Sbjct: 134 cttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 43 catttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||| ||||||| |||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactaga 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 43 catttcccacattcatattgatgttaatgaatctaga 79
||||||||||||||||||||||| |||| ||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctaga 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 catcaatatgaatgtgagaaatgttag 115
|||||||||||||||| ||||||||||
Sbjct: 27 catcaatatgaatgtgggaaatgttag 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 catcaatatgaatgtgagaaatgttag 115
|||||||||||||||| ||||||||||
Sbjct: 90 catcaatatgaatgtgggaaatgttag 116
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatct 76
|||||| | |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 139 tataagactttctagcattgcccacattcatatatatgttaatgaatct 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||| ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 24 tataagactttctggcattgcccacattcatatatatgttaataaatctaga 75
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| |||||||| | |||||| ||| |||| |||||||| |||||||||||| |||||
Sbjct: 147 tttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctaga 88
Query: 80 t 80
|
Sbjct: 87 t 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | || ||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctaga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 121 cttacattgtgaaacggagggagta 145
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| |||||||||||| ||||||||| ||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgtccacattcatatagatgttaataaatctaga 75
Query: 80 t 80
|
Sbjct: 76 t 76
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| ||||||||||| |||| ||||| | |||||||| ||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 108 aatgttagaatgacttacattgtgaaacggagggagta 145
|||| ||||| | |||||||| ||||||||||||||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 90 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
|||||||| ||| ||| ||||| || ||||| ||||||||||||| ||||||||||
Sbjct: 51 atcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatggagggagta 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 116 aatgacttacattgtgaaacggagggagta 145
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| ||| ||||| |||||||| || ||| |||||||| |||||||||||||
Sbjct: 95 tttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatctaga 36
Query: 80 t 80
|
Sbjct: 35 t 35
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | ||||| |||| ||||||||||||| |||| |||||||||||||
Sbjct: 119 tataagactttctatcattgcccacattcatatagatgctaatgaatctaga 68
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | |||||||||| ||||||||||||| ||| |||||||| ||||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatttaga 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 138
||||||||||| | |||| ||||| | ||||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 119
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||||||||| | |||| ||||| | |||||||| ||||||||||||||||
Sbjct: 107 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctag 78
||||| ||| |||| | |||||||||| ||||||||||||| ||| ||||||||||||
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaatctag 89
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||||||||| ||||||||||||| | |||||||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatatacgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||| | |||| ||||| | |||| | | ||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtagt 3
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | |||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 97 tttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaatctaga 38
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 88 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||| ||||||||||| |||| ||||| | |||||||| ||||||||||||| ||||
Sbjct: 51 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggagggaatagt 110
Query: 148 t 148
|
Sbjct: 111 t 111
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 28 tataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
|||||| | |||||||||| ||||||||||||| | |||||||||||||||
Sbjct: 109 tataagactttctagcattgcccacattcatatatacgttaatgaatctaga 58
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagtagt 147
||||||||||| | |||| ||||| | |||| | | ||||||||||||||||||
Sbjct: 77 atatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtagt 130
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 94 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagta 145
||||| || |||| |||| ||||| | |||||||||||||||||||||||||
Sbjct: 56 atatgtatatgagcaatgctagaaagtcttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||||||| |||| | || ||||||| |||| |||||| | ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatctaga 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 77
||||||||| |||| | |||||||||| | || || ||||| || |||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 121 cttacattgtgaaacggagggagtag 146
|||||||||||||||||||| |||||
Sbjct: 134 cttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 20 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctaga 79
||||| ||| |||| | ||||||| || ||||||||||||| |||||||||||||||||
Sbjct: 16 tttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 40 tagcatttcccacattcatattgatgttaatgaatcta 77
||||||| ||||||||||||| ||| | ||||||||||
Sbjct: 127 tagcattgcccacattcatatagatatcaatgaatcta 90
