miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 252 bits (127), Expect = 1e-66
Identities = 151/159 (94%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 3 ggtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 63 taatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaa 122
Query: 127 tgttagaatgacttacattgtgaaacggaggaagtagta 165
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggaggaagtagta 161
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | | ||||||||||||||||||||||||| || |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 242 bits (122), Expect = 1e-63
Identities = 146/154 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||| |||||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | | | ||| | ||||||||||||||||||| |||||||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 242 bits (122), Expect = 1e-63
Identities = 146/154 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| | | ||| | |||||||||||||||| ||||||||||||| |||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 236 bits (119), Expect = 8e-62
Identities = 147/155 (94%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||
Sbjct: 98 aatgaatctaaacatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 206 bits (104), Expect = 7e-53
Identities = 144/155 (92%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 atgaatctag-acatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| ||||| || | | |||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagcacata--catatgtttagattcattaacatcaatatgaatgtgggaaat 122
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||| ||||
Sbjct: 123 gctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 236 bits (119), Expect = 8e-62
Identities = 146/155 (94%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagta 158
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||||| ||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 236 bits (119), Expect = 8e-62
Identities = 146/155 (94%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||||| ||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 236 bits (119), Expect = 8e-62
Identities = 146/155 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||| ||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagtag 159
Score = 234 bits (118), Expect = 3e-61
Identities = 145/154 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 236 bits (119), Expect = 8e-62
Identities = 146/155 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|| ||||||||| |||||||||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagtag 159
Score = 194 bits (98), Expect = 3e-49
Identities = 143/158 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||||||||||||||||||||| | ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagtaa 166
|| ||||||||||||||||||||||||| ||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtagtaa 1
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 234 bits (118), Expect = 3e-61
Identities = 145/154 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 192 bits (97), Expect = 1e-48
Identities = 142/157 (90%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatac 62
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||||||| | | ||| | ||||||||||||| |||||||||||||||| |||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaa 122
Query: 127 tgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||||||||||||||||| |||||
Sbjct: 123 tgttagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 228 bits (115), Expect = 2e-59
Identities = 139/147 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| | | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacgga 155
||||||||||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 174 bits (88), Expect = 2e-43
Identities = 139/156 (89%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 3 ggtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgt 62
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||||||| | | ||| | |||||||||||||| ||||| |||||| | |||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaa 122
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| |||||||||||||||||||||||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 147/158 (93%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| ||| ||| ||||||||||||||||||| |||||||||||| |||
Sbjct: 99 aatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaa 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagta 165
|||||||||||||| |||||||||||||||||||||||
Sbjct: 39 gttagaatgacttatattgtgaaacggaggaagtagta 2
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| |||||||||||| | ||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 144/154 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 142/158 (89%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgt 62
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||||||| | | ||| | ||||||||||||||||| |||||||||||| ||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaa 122
Query: 127 tgttagaatgacttacattgtgaaacggaggaagtagt 164
|| |||||||||||||||||||||||||||| ||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 224 bits (113), Expect = 3e-58
Identities = 147/158 (93%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 69 atgaatctagacatagttatctatctagattcattaacatca----atatgaatgtgaga 124
||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 145/163 (88%), Gaps = 4/163 (2%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat----tg 62
|||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtg 62
Query: 63 atgttaatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtga 122
||||||||||||||||| | | ||| | ||||||||||||||||||| ||||||||||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgg 122
Query: 123 gaaatgttagaatgacttacattgtgaaacggaggaagtagta 165
|||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 123 gaaatgctagaatgacttacattgtgaaacggagggagtagta 165
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 145/156 (92%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||| ||||||| |||||
Sbjct: 124 gctagaatgacttacattgtgatacggagggagtag 159
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | ||||||||||||||||||||||| |||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
| ||||||||||||||||||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 142/158 (89%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| | | ||| | ||||||||||||| ||||||||| |||||| |||||
Sbjct: 64 aatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagta 165
|| ||||||||| ||||||||||||||| |||||||
Sbjct: 124 tctaaaatgacttagattgtgaaacggagggagtagta 161
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 200 bits (101), Expect = 4e-51
Identities = 143/157 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | ||||||||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagta 165
| |||||||||||||| ||||||||| | |||||||
Sbjct: 125 gtggaatgacttacattatgaaacggaaggagtagta 161
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| |||||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 174 bits (88), Expect = 2e-43
Identities = 139/156 (89%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| | | | ||| | |||||||||||||||| |||||| |||||| |||||
Sbjct: 99 aatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||||||||||| |||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||| | ||||||||||||||||| |||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 192 bits (97), Expect = 1e-48
Identities = 142/157 (90%)
Strand = Plus / Plus
Query: 6 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 2 aggtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatg 61
Query: 66 ttaatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaa 125
||||||||||||| | ||| | ||||||||||||||||| ||||||||||||||||
Sbjct: 62 ttaatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaa 121
Query: 126 atgttagaatgacttacattgtgaaacggaggaagta 162
||| |||||||||||||||||||||||||||| ||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | || | |||| ||||||||||||||||||||||| | | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 216 bits (109), Expect = 7e-56
Identities = 144/157 (91%), Gaps = 9/157 (5%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagta 165
||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtagta 2
Score = 212 bits (107), Expect = 1e-54
Identities = 142/155 (91%), Gaps = 9/155 (5%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagtag 150
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 214 bits (108), Expect = 3e-55
Identities = 144/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||| |||||| |||||||||||||| ||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagtag 157
Score = 174 bits (88), Expect = 2e-43
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| |||||| | | | ||| | ||||||||||||||||||||||||||| || ||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||||||||| |||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 214 bits (108), Expect = 3e-55
Identities = 144/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||| |||||| |||||||||||||| ||||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtag 4
Score = 174 bits (88), Expect = 2e-43
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| |||||| | | | ||| | ||||||||||||||||||||||||||| || ||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||||||||| |||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 214 bits (108), Expect = 3e-55
Identities = 144/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||||| ||| | |||| |||||||||||||||||||||||| ||||
Sbjct: 97 aatgaatctagacata--tatatgtctacattcattaacatcaatatgaatgtagaaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||||||||||||||||| |||||||||||||
Sbjct: 39 gctagaatgacttacattgtggaacggaggaagta 5
Score = 196 bits (99), Expect = 7e-50
Identities = 141/154 (91%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||||||| ||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatgtagacata--tatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||| |||||||| ||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 212 bits (107), Expect = 1e-54
Identities = 142/154 (92%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 92 atgaatctagacata------tatctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 188 bits (95), Expect = 2e-47
Identities = 142/158 (89%), Gaps = 6/158 (3%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| ||| | ||||||||||||| ||||||||||||||| |||||
Sbjct: 64 aatgaatctaga------tatatgtctagattcattagcatcaatatgaatgtaggaaat 117
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagta 165
| |||||||||||| ||||||||||||||| |||||||
Sbjct: 118 gctagaatgacttatattgtgaaacggagggagtagta 155
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||||||||||||||||| | | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 167 bits (84), Expect = 6e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||| |||||| | | ||| | ||||||||||||| ||||||||||||| | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||| ||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 210 bits (106), Expect = 5e-54
Identities = 143/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagta 5
Score = 190 bits (96), Expect = 4e-48
Identities = 142/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| ||||||||||||||||||| ||||| ||| || ||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
||||||||||||||||||||||||||||| ||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtagt 159
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 206 bits (104), Expect = 7e-53
Identities = 143/155 (92%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| ||| || | || |||||||||||||||||||| || ||| |||||
Sbjct: 64 aatgaatctaga--taggcatatgtccagattcattaacatcaatataaacgtgggaaat 121
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||| ||||||||||||||||||||
Sbjct: 122 gctagaatgacttatattgtgaaacggaggaagta 156
Score = 204 bits (103), Expect = 3e-52
Identities = 142/154 (92%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 atgaatctggacata--tgcctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 204 bits (103), Expect = 3e-52
Identities = 141/154 (91%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | | |||||||||||| ||||||||||||||||| ||||||
Sbjct: 92 atgaatctagacaga------tgtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
Score = 190 bits (96), Expect = 4e-48
Identities = 140/155 (90%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||
Sbjct: 65 atgaatctagac------atctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| ||||||||||| |||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagtag 153
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 142/155 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||| || | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||||| || |||||||||||||||||||| ||||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagtag 159
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||||| | | ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | | | |||||||||||||||||| |||||||| | | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||||||| ||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtagt 3
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 142/155 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|| ||||||||| |||||||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagtag 4
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||| |||| ||||||||||||||| ||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||| |||||||||||||| || | |||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 188 bits (95), Expect = 2e-47
Identities = 140/155 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||| | ||| | ||||||||||||| |||||||||| ||||||||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|| ||||||||||||||||||||||||| |||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| || ||| ||| ||||| || |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||||||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 182 bits (92), Expect = 1e-45
Identities = 140/156 (89%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| ||| ||| | | ||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||||||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||| |||||||||| | |||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| |||||||||| |||||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
Score = 165 bits (83), Expect = 2e-40
Identities = 137/155 (88%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||||
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| | | ||| | ||||||||||| ||||||||||| |||||| |||||
Sbjct: 99 aatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| | |||||||||| |||||||||||||| ||||
Sbjct: 39 gcaaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 142/156 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||| ||| |||||||||||||||||| | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
||||||||||||||||| || |||||| | ||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagtagt 3
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||| |||||| || |||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| || | |||||||||||||||| | ||||||||||| |||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||| || | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| |||| || |||||||||||||||||||| ||||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
Score = 159 bits (80), Expect = 1e-38
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||||| | | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | | |||||||||||||||||||| |||||||| | | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||||||| ||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtagt 160
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||| ||||||||||| ||||||||| ||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||||||||||||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 194 bits (98), Expect = 3e-49
Identities = 107/110 (97%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatct 90
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgactt 140
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 147 bits (74), Expect = 6e-35
Identities = 101/110 (91%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatct 90
|||||||||||||||||| |||||||||||||||||||||||||||||| | | ||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgactt 140
|||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||| || ||| | |||||||||||| |||| ||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||| |||||||||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 142/158 (89%)
Strand = Plus / Plus
Query: 5 caggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct: 1 caggtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagat 60
Query: 65 gttaatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgaga 124
| |||||||||||| |||| ||| |||||||||||||||||||||||||||||| |
Sbjct: 61 gctaatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaa 120
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||||||||||||||||||||||||| ||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | ||| || | |||||||||||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||| ||||||||||||| ||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
Score = 188 bits (95), Expect = 2e-47
Identities = 140/155 (90%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||| ||||||||||| || |||||| ||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||| |||||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 143/156 (91%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaat-gtgagaaat 127
||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtga-aaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagtag 4
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||| |||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 133/146 (91%)
Strand = Plus / Plus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
|||||||||||||||||||||||||||||||||| || |||||||||||||| | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 72 aatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgtta 131
|||||||||||| ||| | |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 132 gaatgacttacattgtgaaacggagg 157
||||||||||||||||||||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
Score = 182 bits (92), Expect = 1e-45
Identities = 132/146 (90%)
Strand = Plus / Minus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 72 aatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgtta 131
|||||||||||| | | | |||||||||| | ||||||||||||||||| ||| ||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 132 gaatgacttacattgtgaaacggagg 157
||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 188 bits (95), Expect = 2e-47
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||||||| ||| ||||||||||||||||||| | ||||||||||| |||||
Sbjct: 65 atgaatttagacata--tatatatctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 174 bits (88), Expect = 2e-43
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtt 98
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| ||| ||| | |||| |||||||||||| | |||||||||| |||||
Sbjct: 97 aatgaatctagatata--tatatgtctaaattcattaacatgagtatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||||||||| ||||||||||||||||||||
Sbjct: 39 gccagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||| ||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||| |||| ||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 139/155 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | | | |||||| ||||||||||||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||| |||| | | | |||||||||||||||||| |||||||| || | ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 178 bits (90), Expect = 2e-44
Identities = 137/155 (88%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||| ||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 86 atgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
Score = 155 bits (78), Expect = 2e-37
Identities = 134/155 (86%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | ||||| |||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||||||||| |||| |||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagtag 147
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| ||||||||||||||| |||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||| |||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | ||| | |||||||||||| |||| ||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 178 bits (90), Expect = 2e-44
Identities = 105/110 (95%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatct 90
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgactt 140
|| |||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 147 bits (74), Expect = 6e-35
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatct 90
||||||||||||||||||||||||||||||||||||||||||||||| | | | ||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgactt 140
|||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 137/153 (89%)
Strand = Plus / Minus
Query: 10 actccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 69
||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 70 tgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgt 129
|||||||||||||| ||||||| |||||||| |||| || |||||||| | ||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 130 tagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||||||||||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||| | | | ||| | |||||||||| |||| || ||||||||||| ||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggagg 157
|||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 176 bits (89), Expect = 6e-44
Identities = 139/156 (89%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt- 62
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||||||| |||||||||| | ||||||||||||||||||||||| |||
Sbjct: 63 -----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||||||||||| |||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagtag 153
Score = 149 bits (75), Expect = 1e-35
Identities = 134/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||| | |||| | | || | ||||||| ||||||||||||||||| |||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 174 bits (88), Expect = 2e-43
Identities = 139/154 (90%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 89 atgaatctagacata--tatctatctagattcattaacatc------aatgtgggaaatg 38
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| ||||||||||||||||| |||||||||
Sbjct: 37 ctagaa-gacttacattgtgaaacagaggaagta 5
Score = 137 bits (69), Expect = 5e-32
Identities = 135/155 (87%), Gaps = 9/155 (5%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 4 gtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtt 56
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| ||| ||| | ||||||||||||||||||||||||||| || |||||
Sbjct: 57 aatgaatctaga--tagatatatgtctagattcattaacatcaatatgaatatgggaaat 114
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| || ||||||||| ||||||||||||||| ||||
Sbjct: 115 gctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 174 bits (88), Expect = 2e-43
Identities = 137/155 (88%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||| ||| | ||||||||||||||||| ||||| |||||| |||||
Sbjct: 89 aatgaat----------atatatgtctagattcattaacattaatataaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 172 bits (87), Expect = 1e-42
Identities = 130/146 (89%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| || ||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagacata----------tatattcattaacatcaatatgaatgtgggaaatg 114
Query: 129 ttagaatgacttacattgtgaaacgg 154
|||||||||||||||||||||||||
Sbjct: 115 ctagaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||| | | | |||||| ||||||||||||| |||| ||||| | |||
Sbjct: 64 aatgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||| ||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||| |||| | | | |||||||||||||||||| |||||||||| | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 172 bits (87), Expect = 1e-42
Identities = 139/154 (90%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||| |||||||| || ||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 95 atggatctagac-ta--tatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 137/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| |||| ||| ||||||| |||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctag--atagatat-agtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
| |||||||||||||| ||||||||||| ||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagtagt 157
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 168 bits (85), Expect = 2e-41
Identities = 134/153 (87%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagt 161
|||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
Score = 137 bits (69), Expect = 5e-32
Identities = 127/149 (85%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 14 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 73
||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 74 tctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgttaga 133
||||| ||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 70 tctag-------------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 134 atgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||| ||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 168 bits (85), Expect = 2e-41
Identities = 138/156 (88%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||||||| |||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 94 -----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| |||||||||||||||||||||||||||| |||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtag 4
Score = 141 bits (71), Expect = 3e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||| | |||| | | || | ||||||| |||||||||||||| || |||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 168 bits (85), Expect = 2e-41
Identities = 135/154 (87%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 126/147 (85%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 75
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 76 tagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgttagaat 135
||| || |||||||||||| |||||||| ||| || ||||| ||||||
Sbjct: 72 tag------------atgtagattcattaatatcaatataaatatggaaaatgctagaat 119
Query: 136 gacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||| ||||
Sbjct: 120 gacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||| |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| ||||| | | |||||||||||||||||||| ||||| || || | ||
Sbjct: 99 aatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaag 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagt 164
| |||||||||||||||| ||||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagtagt 3
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||| || |||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| |||| || | | ||||||||||| |||| ||||||||||| | ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||||| ||||||||||| ||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 168 bits (85), Expect = 2e-41
Identities = 135/154 (87%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||| |||||| || ||||| |||||||||||||||||||||| ||||||
Sbjct: 65 atgtatctag------------atatagatacattaacatcaatatgaatgtgggaaatg 112
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||| |||||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagta 146
Score = 161 bits (81), Expect = 4e-39
Identities = 134/154 (87%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||| ||||| ||||||||| |||||||||||||||||||||| |||||
Sbjct: 86 atgtatcta------------tatctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 167 bits (84), Expect = 6e-41
Identities = 141/159 (88%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| |||| ||| | ||| |||||||||||||| | ||||||||| |||||
Sbjct: 97 aatgaatctatgcata--tatatgtcttgattcattaacatctacatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagtaa 166
| || ||||||||||||||||||||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagtagtaa 1
Score = 157 bits (79), Expect = 6e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||| ||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 65 atgaatcaagacata--tatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| |||||||| |||| ||||||||||| ||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | | |||||||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | ||| |||||||||||||||||||| || |||||||| | ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
||| || | |||||||||||||||||||| ||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagtagt 160
Score = 153 bits (77), Expect = 9e-37
Identities = 137/157 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | || || |||| |||||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | | | |||||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagta 165
||| | | |||||||||||||||||||| |||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagtagta 2
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||| |||||| ||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| | |||||||||||||||||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
||||| | |||||||| ||||||||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagtagt 160
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | |||||||||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | ||| | |||||||||||||||||| ||||||||||| | |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||||||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| |||||| |||||||| ||||||| | |||||||||||||
Sbjct: 92 atgaatctagagata------tatctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 134/157 (85%), Gaps = 6/157 (3%)
Strand = Plus / Plus
Query: 6 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||| ||||||||||||||||||||||||| ||||||||| |||||| | |||||||
Sbjct: 2 aggtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatg 61
Query: 66 ttaatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaa 125
|||||||| |||| ||| | ||||||||||||| ||||||||| |||||| ||
Sbjct: 62 ctaatgaatttaga------tatatctctagattcattagcatcaatataaatgtggaaa 115
Query: 126 atgttagaatgacttacattgtgaaacggaggaagta 162
||| || ||||||||| ||||||||||||||| ||||
Sbjct: 116 atgctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| || ||||| ||| | ||||||||||| |||| |||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||| | | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| || | ||| | | || |||||||| |||| ||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 161 bits (81), Expect = 4e-39
Identities = 134/154 (87%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||| |||||||| ||| ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 125/147 (85%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 75
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 76 tagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgttagaat 135
||| || |||||||||||| |||||||| ||| || ||||| || |||
Sbjct: 72 tag------------atgtagattcattaatatcaatataaatatggaaaatgctataat 119
Query: 136 gacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||| ||||
Sbjct: 120 gacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 137/156 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||| |||||| |||||||||||| |||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||||| |||||||||| |||||||| ||||||||||||| || ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||| | |||| |||||||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagtagt 3
Score = 141 bits (71), Expect = 3e-33
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||| |||| | ||||||||||||| |||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||| | | ||| | | ||||||||||| ||||||||||||| |||||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||| |||||| |||||||| |||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagtag 159
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 157 bits (79), Expect = 6e-38
Identities = 137/158 (86%), Gaps = 15/158 (9%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 69 atgaatcta---gacatagttatctatctagattcattaacatcaatatgaatgtgagaa 125
||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 65 atgaatctatgtgacatagt------------ttcattaacatcaatatgaatgtgagaa 112
Query: 126 atgttagaatgacttacattgtgaaacggaggaagtag 163
||| ||||||||||||||||||||||| |||| |||||
Sbjct: 113 atgctagaatgacttacattgtgaaaccgagggagtag 150
Score = 155 bits (78), Expect = 2e-37
Identities = 136/155 (87%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||| ||| | || | |||||||||||||||||||||||||||| |||||
Sbjct: 89 atgaaacta--------tgtc-acatagattcattaacatcaatatgaatgtggaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 157 bits (79), Expect = 6e-38
Identities = 134/155 (86%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatctagat-------------tatgaatgtgggaaat 110
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||| ||||||||||||||
Sbjct: 111 gctagaatgacttacattgtaaaacggaggaagta 145
Score = 125 bits (63), Expect = 2e-28
Identities = 130/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 146 gtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata-------- 95
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||| | | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 94 -----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 136/155 (87%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | || ||||||| | ||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||| | ||| | |||||||||||||||||| ||||||||||| | |||
Sbjct: 64 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||| ||||||||||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggaggaagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | | | |||||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||| ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | || ||||||| | ||||||||||| ||||||
Sbjct: 159 gtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||| | ||| | |||||||||||||||||| ||||||||||| | |||
Sbjct: 99 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||| ||||||||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggaggaagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| | | | |||||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||| ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 153 bits (77), Expect = 9e-37
Identities = 134/156 (85%), Gaps = 14/156 (8%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||| || | |||||||| || |||||||||||||||||| |||||
Sbjct: 64 catga--------------atttgtctagatttatgaacatcaatatgaatgtgggaaat 109
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| ||||||||||||||||||||||||||||||||||
Sbjct: 110 gctagaatgacttacattgtgaaacggaggaagtag 145
Score = 141 bits (71), Expect = 3e-33
Identities = 131/154 (85%), Gaps = 14/154 (9%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| ||||||||| | |||||| |||||||||||||||||| ||||||
Sbjct: 84 ataaatctagac--------------aaattcatgaacatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||||| |||||||||||||||||||| ||||
Sbjct: 38 ctagaatggcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 153 bits (77), Expect = 9e-37
Identities = 129/148 (87%), Gaps = 15/148 (10%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||| ||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctaaaca--------tatctagattcattaacatcaatatga-------aaatg 109
Query: 129 ttagaatgacttacattgtgaaacggag 156
|||||||||||||||||||||||||||
Sbjct: 110 ctagaatgacttacattgtgaaacggag 137
Score = 153 bits (77), Expect = 9e-37
Identities = 131/149 (87%), Gaps = 15/149 (10%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtt 92
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| || ||| |||||||||||||||||||||||||||| |||||
Sbjct: 91 aatgaatctagatat-gtt-------tagattcattaacatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggag 156
|||||||||||||||||||||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggag 11
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 153 bits (77), Expect = 9e-37
Identities = 135/155 (87%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||| ||| | || ||| || ||||||||||||||||| |||||| |||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||||||||||||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacggaggaagtag 152
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||| || | |||| || ||| |||||||||||||||||||||||| |||||
Sbjct: 91 atgaaact-taaatag------atgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||||||||||||| ||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||||||| |||| |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| | | ||||||||||||||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
||||| | |||||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagtagt 3
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| ||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||| | || | ||||||||||||| |||| | |||||| || | ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 151 bits (76), Expect = 4e-36
Identities = 132/155 (85%), Gaps = 18/155 (11%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||| |||||||||||||||||||||||||||| || |||||
Sbjct: 64 aatga------------------atctagattcattaacatcaatatgaatatgggaaat 105
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||| ||||||||||||||||
Sbjct: 106 gctagaatgacttacattatgaaacggaggaagta 140
Score = 133 bits (67), Expect = 8e-31
Identities = 129/154 (83%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 80 atgaatc------------------tagattcattaacatcaatatgaatatgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 151 bits (76), Expect = 4e-36
Identities = 132/155 (85%), Gaps = 18/155 (11%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| |||| |||||||| |||||||||||| |||||
Sbjct: 81 aatgaatctatacat------------------attaacattaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 130/155 (83%), Gaps = 18/155 (11%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||| || || |||||||||||||||||||||||||||| |||||
Sbjct: 64 aat--atgta----------------tagattcattaacatcaatatgaatgtgggaaat 105
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||| ||||||||||||||| ||||
Sbjct: 106 gctagaatgacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 149 bits (75), Expect = 1e-35
Identities = 132/155 (85%), Gaps = 17/155 (10%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 82 aatgaatcaa-----------------tgattcattaacatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 131/154 (85%), Gaps = 17/154 (11%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatc-----------------attgattcattaacatcaatatgaatgtgagaaatg 107
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||| ||||||||||||||||||| ||||
Sbjct: 108 ctagaatgaattacattgtgaaacggagggagta 141
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||| |||| ||| |||||| |||| |||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||| ||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||| |||||||| | || ||||||| ||||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 68 aatgaatctagacatagttatc-tatctagattcattaacatcaatatgaatgtgagaaa 126
||| |||||| | ||| | || | ||||||||||||| |||| ||||||||||| | ||
Sbjct: 64 aataaatctatatata-taataatgtctagattcattagcatctatatgaatgtgggcaa 122
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|||||||| | |||||||||||||||||||| ||||
Sbjct: 123 tgttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 145 bits (73), Expect = 2e-34
Identities = 132/154 (85%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| |||||||||||||||||||||||||||| | |||||
Sbjct: 65 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 112
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| |||||||||||||
Sbjct: 113 ctagaatgacttatattgtggaacggaggaagta 146
Score = 141 bits (71), Expect = 3e-33
Identities = 133/156 (85%), Gaps = 12/156 (7%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||| |||||| |||||||||||||||||| | | |||||||||||||||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 87 aatgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| || ||||||||||||| ||||||||||| |||||
Sbjct: 39 ggtaaaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 145 bits (73), Expect = 2e-34
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 67 taatgaatctagacata 83
|||||||||||||||||
Sbjct: 63 taatgaatctagacata 79
Score = 127 bits (64), Expect = 5e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 83 agttatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttac 142
|||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 84 agttatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 25
Query: 143 attgtgaaacggaggaagta 162
||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagt 34
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 acttacattgtgaaacggaggaagta 162
||||||||||||||||||||| ||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 145 bits (73), Expect = 2e-34
Identities = 132/154 (85%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| |||||||||||||||||||||||||||| | |||||
Sbjct: 86 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| |||||||||||||
Sbjct: 38 ctagaatgacttatattgtggaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 133/156 (85%), Gaps = 12/156 (7%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||| |||||| |||||||||||||||||| | | |||||||||||||||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 64 aatgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaat 111
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| || ||||||||||||| ||||||||||| |||||
Sbjct: 112 ggtaaaatgacttacattatgaaacggagggagtag 147
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 145 bits (73), Expect = 2e-34
Identities = 133/155 (85%), Gaps = 16/155 (10%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||| |||| |||| |||||||||||||| || |||||
Sbjct: 64 aatgaatctaga------tatc----------cattgacatcaatatgaatatgggaaat 107
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 108 gctagaatgacttacattgtgaaacggaggaagta 142
Score = 145 bits (73), Expect = 2e-34
Identities = 131/154 (85%), Gaps = 16/154 (10%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct: 82 atggat----------------atctagattcattaatatcaatatgaatgtgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 143 bits (72), Expect = 9e-34
Identities = 131/155 (84%), Gaps = 18/155 (11%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| |||| |||||||| |||||||||||| |||||
Sbjct: 81 aatgaatctatacat------------------attaacattaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 129/155 (83%), Gaps = 18/155 (11%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||| || || |||||||||||||||||||||||||||| ||||
Sbjct: 64 aat--atgta----------------tagattcattaacatcaatatgaatgtggaaaat 105
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||| ||||||||||||||| ||||
Sbjct: 106 gctagaatgacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 143 bits (72), Expect = 9e-34
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 68 aatgaatctagacata 83
||||||||||||||||
Sbjct: 64 aatgaatctagacata 79
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 15 cggaggtagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 141 bits (71), Expect = 3e-33
Identities = 134/156 (85%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatga 62
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
|| |||| ||||||||||||| |||||||||||||| ||| |||||||
Sbjct: 63 tag-----------atag--atctatctagatttattaacatcaatataaatatgagaaa 109
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| |||||||||||||||||||||||||||| ||||
Sbjct: 110 tgctagaatgacttacattgtgaaacggagggagta 145
Score = 135 bits (68), Expect = 2e-31
Identities = 133/154 (86%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| ||||||| |||| ||||||| || |||||||||||||||| ||||||
Sbjct: 85 ataaatctag--atag--atctatc---------tatcatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 139 bits (70), Expect = 1e-32
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 68 aatgaatctagaca 81
||||||||||||||
Sbjct: 80 aatgaatctagaca 67
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 129 cggagggagta 139
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 139 bits (70), Expect = 1e-32
Identities = 91/97 (93%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 69 atgaatctagacatagttatctatctagattcattaa 105
||| ||||||||||| ||||||||||||| ||||||
Sbjct: 69 atggatctagacata--tatctatctagatccattaa 35
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 152 cggaggaagtag 163
||||||||||||
Sbjct: 119 cggaggaagtag 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagt 34
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 137 acttacattgtgaaacggaggaagta 162
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 139 bits (70), Expect = 1e-32
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 68 aatgaatctagaca 81
||||||||||||||
Sbjct: 64 aatgaatctagaca 77
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| |||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| ||| |||||||||||||||| ||||| | ||| | |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 8e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||| ||| ||||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | | | || | |||||||||||||||||| | |||||| || | ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 137 bits (69), Expect = 5e-32
Identities = 132/158 (83%), Gaps = 20/158 (12%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 78 atgaatc--------------------gattcattagcatcaatatgaatgtgggaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagtaa 166
|||||||||||||||||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtagtaa 1
Score = 129 bits (65), Expect = 1e-29
Identities = 128/154 (83%), Gaps = 20/154 (12%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatc--------------------gattcattagcatcaatatgaatgtgggaaatg 104
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 105 ctagaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 137 bits (69), Expect = 5e-32
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 60 tatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacatt 119
Query: 146 gtgaaacggaggaagta 162
|||||||||||| ||||
Sbjct: 120 gtgaaacggagggagta 136
Score = 133 bits (67), Expect = 8e-31
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 76 atgaatctaga 66
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 135 bits (68), Expect = 2e-31
Identities = 131/151 (86%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||||||||||| ||| ||||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| || | ||| | || ||||||||||||||| ||||||||||| | ||||
Sbjct: 96 atgaatctagccaca--tatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaa 159
|||||||||||| ||| |||||||||||||
Sbjct: 38 ctagaatgacttatattatgaaacggaggaa 8
Score = 133 bits (67), Expect = 8e-31
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 14 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 73
||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 74 tctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgttaga 133
||| |||||| ||| | |||||||||||| ||| ||| ||||||| | ||| ||||
Sbjct: 70 tctggacata--tatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 134 atgacttacattgtgaaacggaggaagtag 163
|||||||| ||||||||||||||| |||||
Sbjct: 128 atgacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 133 bits (67), Expect = 8e-31
Identities = 129/155 (83%), Gaps = 21/155 (13%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtt 79
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||| || |||||||||| |||||||||||||||| |||||
Sbjct: 78 aataaa---------------------agattcattaccatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| |||||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 69 atgaatct 76
||||||||
Sbjct: 65 atgaatct 72
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | || ||||||| | | |||||| | |||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | | | |||||||||||||||||| ||||||||||| | ||||
Sbjct: 96 atgaatctagacata--tgtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||||||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||| | || | |||||||||||||||||| | |||||| | || |||
Sbjct: 64 aatgaatctagacaca--catatgtctagattcattaacatctagatgaatataagcaat 121
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| || || | |||||||| ||||||||||| ||||
Sbjct: 122 gctacaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||| | |||||| | | |||| |||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||| |||||| ||| | |||||||||||||||||| ||||||||||| | |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||| ||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | | |||| ||||||||||||| |||||||| || | | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||||||| ||| ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | | ||| | ||||||||||||| |||| || |||||||| | ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
||||| | |||||||| |||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtag 4
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| | |||||||||| |||||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | || ||| |||||||||||||||| ||||||||| | | ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 133 bits (67), Expect = 8e-31
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 152 cggaggaagtagt 164
|||||| ||||||
Sbjct: 15 cggagggagtagt 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 116 aatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
|||||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagtag 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 55
|||| ||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | || ||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| ||||||| |||||||||||| |||||||| || | |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||| ||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||| ||||| ||| || | |||||||||||||||||| ||||||||||| |||
Sbjct: 64 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||||||||||||||| ||||
Sbjct: 124 cctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| ||||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||| ||| ||| |||||||||||||||| ||||| || || ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||| | |||||||||| ||| || ||||| ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| | ||| | | |||||||||||||||| | | ||||||||| | |||
Sbjct: 99 aatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | || ||||||| |||| |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| | | ||||||||||||| || ||||| || |||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||| | |||||||||| | || || ||||| || |||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| ||| | || | |||||||||||||||||| | |||||| || | |||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
| || || | ||||||||||||||||||||||||||
Sbjct: 124 gctaaaaagtcttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| |||||| ||||||||||||| |||||||| |||||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||||| || || |||||||| ||||||| |||| ||| |||||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||| || ||| | |||||||||| ||||||| | ||||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagt 164
|| ||||||||||||| |||||| |||| ||||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagtagt 160
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | || ||| ||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| ||||||| |||||||||||| |||||||| || | |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||| ||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||||||
Sbjct: 159 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||| ||||| ||| || | |||||||||||||||||| ||||||||||| |||
Sbjct: 99 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||||||||||||||| ||||
Sbjct: 39 cctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 131 bits (66), Expect = 3e-30
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 89 ctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtg 148
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 149 aaacggaggaagta 162
||||||||||||||
Sbjct: 114 aaacggaggaagta 127
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtt 69
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 68 aatgaatctaga 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttc 48
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 123 gaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 130/154 (84%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||| ||||| |||||||| | ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatatgaatgtgaaaaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaataacttacattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| ||||| |||||||| ||||||||| ||||| |||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatataaatgtagaaaatg 112
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| ||||| ||||||||||||||||||| ||||
Sbjct: 113 ctaaaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 69 atgaatctagaca 81
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 104 aacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 136
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 69 atgaatcta 77
|||||||||
Sbjct: 65 atgaatcta 73
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 154 gaggaagtag 163
|||| |||||
Sbjct: 13 gagggagtag 4
Score = 103 bits (52), Expect = 8e-22
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 1e-29
Identities = 130/154 (84%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| ||| |||||||||||||| ||||||||| ||| ||| ||||
Sbjct: 86 atgaatttag------------atctagattcattagcatcaatataaatatgaaaaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||||||||||| |||| || ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| ||||| |||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||| ||||||||||||||||||| ||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 69 atgaatcta 77
|||||||||
Sbjct: 70 atgaatcta 62
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 122 gagggagta 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||| |||||||||| ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 69 at 70
||
Sbjct: 61 at 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 101 attaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaag 160
||||||||||||||||||||| ||||| || ||||||||| |||||||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 161 ta 162
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 127 bits (64), Expect = 5e-29
Identities = 132/156 (84%), Gaps = 14/156 (8%)
Strand = Plus / Minus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 146 ggtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgt 87
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
|||| |||||||| ||| ||| |||||||||| ||||||||||| |||
Sbjct: 86 taataaatctagatata--tat------------attaacatcactatgaatgtgaaaaa 41
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| |||||||||||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/154 (81%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|| ||| |||||||||| |||||||||| |||||||||| |||||
Sbjct: 65 at--------------atatatatctagatttattaacatcactatgaatgtgggaaata 110
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| |||||| |||| ||||
Sbjct: 111 ctagaatgacttacattatgaaacagagggagta 144
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 63 atgaatctaga 53
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 150 aacggaggaagtagta 165
|||||||| |||||||
Sbjct: 111 aacggagggagtagta 126
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 124 aaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcattt 47
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 135/158 (85%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | |||||||||| || | |||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||||||| ||| | | ||||||||||||||||| ||||||||||| |||
Sbjct: 64 aatgaatctaggtata--tgcgtgtctagattcattaacatttatatgaatgtggacaat 121
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagta 165
| ||||| | |||||||| |||||||||||||||||||
Sbjct: 122 gctagaaagtcttacattatgaaacggaggaagtagta 159
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||||| | || || |||||||||||||||||||||||||| | | ||||
Sbjct: 96 atgaatctagac--acgcatatacctagattcattaacatcaatatgaatataggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | |||||| || |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgaga-aat 127
||||||||| ||| | ||| | |||||||||||||||||| |||||||||| ||| |||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgt-agacaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||| ||||||||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| | |||||||||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | | | | |||||||||||||||| ||||||||||| ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 125 bits (63), Expect = 2e-28
Identities = 132/157 (84%), Gaps = 11/157 (7%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | |||||||||| ||||||| ||||| ||||||
Sbjct: 148 gtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtt 89
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||||||| | |||||||||||||||||| | |||||||||| |||
Sbjct: 88 aatgaatctag-----------tgtctagattcattaacatctaagtgaatgtgagcaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagtagt 164
| ||||| | |||||||||||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagtagt 3
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/154 (81%), Gaps = 11/154 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| | |||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| ||||||||||||||||| ||||| ||||| | ||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| ||||||||||| ||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 123 aacggagggagta 135
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 75 atgaatctagacata 61
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 125 cggaggaagta 135
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| |||||||||||||||||||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 123 bits (62), Expect = 8e-28
Identities = 130/155 (83%), Gaps = 17/155 (10%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||| || | |||||||||||| |||||||||||||||| |||||
Sbjct: 83 aatgtat----------------agctagattcattagcatcaatatgaatgtgggaaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| || ||||||||||||||||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 69 atgaatctag 78
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 123 bits (62), Expect = 8e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 6 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 135 aggtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatg 76
Query: 66 ttaatgaatctaga 79
|||||||||||||
Sbjct: 75 ctaatgaatctaga 62
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
||||||||||||||| ||| |||||||||||| |||||| |||||||||||| |||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 120 aacggagggagta 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 123 bits (62), Expect = 8e-28
Identities = 130/155 (83%), Gaps = 17/155 (10%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||| || | |||||||||||| |||||||||||||||| |||||
Sbjct: 65 aatgtat----------------agctagattcattagcatcaatatgaatgtgggaaat 108
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| || ||||||||||||||||||||||||||||||
Sbjct: 109 gctaaaatgacttacattgtgaaacggaggaagta 143
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 69 atgaatctag 78
||||||||||
Sbjct: 83 atgaatctag 74
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 123 bits (62), Expect = 8e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 6 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2 aggtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatg 61
Query: 66 ttaatgaatctaga 79
|||||||||||||
Sbjct: 62 ctaatgaatctaga 75
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
||||||||||||||| ||| |||||||||||| |||||| |||||||||||| |||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 123 bits (62), Expect = 8e-28
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 35 cattctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatct 94
||||||||||||| |||||||||||| | ||||||||||||||||||| ||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 95 agattcattaacatcaatatgaatgtgagaaatgttagaatg 136
||||||||||||| | ||||||||||| ||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 35 cattctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatct 94
||||||| |||||||||||||||||| | |||||||||||||||| ||| || | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 95 agattcattaacatcaatatgaatgtgagaaatgttagaatg 136
||||||||||||| | ||||||||||| ||||| |||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 123 bits (62), Expect = 8e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 68 aatgaatctagaca 81
||||||||||||||
Sbjct: 88 aatgaatctagaca 75
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 137 cggagggagta 147
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 123 bits (62), Expect = 8e-28
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 54 tatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacatt 113
Query: 146 gtgaaacggaggaagtag 163
|||||||||||||||||
Sbjct: 114 atgaaacggaggaagtag 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| |||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||| |||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 121 bits (61), Expect = 3e-27
Identities = 121/146 (82%), Gaps = 20/146 (13%)
Strand = Plus / Minus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 72 aatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgtta 131
|||||||||||| |||||||||||||||||||||||| ||
Sbjct: 75 aatctagacata--------------------tacatcaatatgaatgtgagaaatgcta 36
Query: 132 gaatgacttacattgtgaaacggagg 157
||||||||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
Score = 113 bits (57), Expect = 8e-25
Identities = 120/146 (82%), Gaps = 20/146 (13%)
Strand = Plus / Plus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatg 67
Query: 72 aatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatgtta 131
|||||||||||| |||| ||||||||||||||||||| ||
Sbjct: 68 --------------------tctagattcattgacataaatatgaatgtgagaaatgcta 107
Query: 132 gaatgacttacattgtgaaacggagg 157
||||||||||||||||||||||||||
Sbjct: 108 gaatgacttacattgtgaaacggagg 133
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| ||||||||||||||| | |||||||||| ||||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaac--atcaatatgaatgtgagaaa 126
||||||||| ||||| ||| | | ||||||||||||| || ||||| ||||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| || || | |||||||||||||||||||| ||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat--gt 66
||||||||||||||||||||||||| | || ||||||| | ||||| ||||| || ||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||||| ||| | || | | |||||||||||||||| | ||||||||| | ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| ||||| | ||||||||||||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||| ||||||| | |||||| | | |||| |||||||| ||||||
Sbjct: 4 gtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||||||| |||||| ||| | |||||||||||||||||| |||||||| || | |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||| ||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | | |||| ||||||||||||| |||||||| || | | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | ||||||| |||||||||||| ||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 55 atgaatctaga 45
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 150 aacggaggaagta 162
|||||||||||||
Sbjct: 103 aacggaggaagta 115
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcat 45
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 130 tagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 69 atgaatctagaca 81
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagtag 131
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 117 bits (59), Expect = 5e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 69 atgaatc 75
|||||||
Sbjct: 74 atgaatc 68
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 150 aacggaggaagtag 163
||||||||||||||
Sbjct: 122 aacggaggaagtag 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||||
Sbjct: 4 gtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 155
||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/155 (84%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||||||||||||||||||| | |||||||||| ||||||| ||| | ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtt 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||| |||||||||||| || | | |||||||||||||||| | ||||||| | |||
Sbjct: 99 aataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaat 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||||||||||||||||||||
Sbjct: 39 actataaagtcttacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | || ||| ||| || ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||||| ||| | |||||||| ||||||||| | ||| ||||| | ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||| |||||||||| | || || ||| || |||||||| | |||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||| |||||||| || | | |||||||||||||||| ||||| ||||||| ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| | ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||| || | |||| ||||||||||||| | |||||||| | |||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||| || | |||||||||| ||||||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 89 ctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtg 148
||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 149 aaacggaggaagta 162
||||||||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 69 atgaatctaga 79
|||||| ||||
Sbjct: 65 atgaatgtaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||||||||||||| ||||||||||||| ||| |||| || |||||||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 69 atgaat 74
||||||
Sbjct: 54 atgaat 49
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 157 gaagtag 163
|||||||
Sbjct: 109 gaagtag 115
Score = 101 bits (51), Expect = 3e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 58
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 113 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 69 atgaatctagacat 82
||||||||| ||||
Sbjct: 72 atgaatctaaacat 59
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||||||||||||||| || ||| |||||||||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 154 gaggaagtag 163
||||||||||
Sbjct: 124 gaggaagtag 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 104 aacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 157 gaagta 162
||||||
Sbjct: 10 gaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Query: 68 aatgaat 74
|||||||
Sbjct: 64 aatgaat 70
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||| || ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 63
Query: 68 aa 69
||
Sbjct: 64 aa 65
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 69 atga 72
||||
Sbjct: 70 atga 67
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 159 agta 162
||||
Sbjct: 127 agta 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 102 ttaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagt 161
|||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 162 a 162
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
|||||||||||||||||||||||||||||| | |||| ||||| || |||||||||||||
Sbjct: 54 tatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacatt 113
Query: 146 gtgaaacggaggaagta 162
|||||||||||||||||
Sbjct: 114 gtgaaacggaggaagta 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| |||||||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||| ||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 69 atgaatctagacatagt--tatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||||| ||| | ||| ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| ||||| | |||| | | ||||||||||||||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 69 atgaatc--tagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
||||||| || | ||| | | | | |||||||||||||||| ||||||||||| | ||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| ||||| | |||| | | ||||||||||| ||||
Sbjct: 125 tgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 113 bits (57), Expect = 8e-25
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 68 aatga 72
|||||
Sbjct: 64 aatga 68
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||
Sbjct: 130 ggtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgt 71
Query: 67 ta 68
||
Sbjct: 70 ta 69
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 159 agta 162
||||
Sbjct: 8 agta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 103 taacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||| ||||| || ||| | ||||||||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||||
Sbjct: 54 tatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacatt 113
Query: 146 gtgaaacggaggaagta 162
|||||||||||||||||
Sbjct: 114 gtgaaacggaggaagta 130
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 113 bits (57), Expect = 8e-25
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 atgaa 73
|||||
Sbjct: 65 atgaa 69
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 98 ttcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 157
|||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 158 aagtagt 164
|||||||
Sbjct: 9 aagtagt 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattct 40
|||||||| |||||||||||| ||||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 68 aatgaatctagacata 83
||||||||||||||||
Sbjct: 64 aatgaatctagacata 79
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||||||||||| | |||| ||||| |||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatt 46
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 95 agattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 154
|||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 155 aggaagta 162
||||||||
Sbjct: 128 aggaagta 135
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 69 atgaatct 76
||||||||
Sbjct: 75 atgaatct 68
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 69 atga 72
||||
Sbjct: 65 atga 68
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
|||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 159 agtag 163
|||||
Sbjct: 8 agtag 4
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 69 atgaatctagac 80
||||||||||||
Sbjct: 76 atgaatctagac 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| ||||||||||||| || ||||| |||||||||||||||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 152 cggaggaagtag 163
|||||| |||||
Sbjct: 126 cggagggagtag 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
|||| ||||||||||||||||||||| ||||||| ||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Minus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||| |||||| |||||||| | || ||||||| ||||||||||||| ||| |
Sbjct: 160 ggtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatat 101
Query: 67 taatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaa 126
|||||||||| ||||| | | | ||||||||||||||||| ||||||||||| | ||
Sbjct: 100 caatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaa 41
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||| |||||| |||||||||
Sbjct: 40 ggctagaaagtcttacattatgaaaccgaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||| |||||| |||||||| | ||||||| || ||||||||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| | ||| | | |||||||||| | ||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||| |||||| |||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 111 bits (56), Expect = 3e-24
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagt 164
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtagt 3
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcat 45
|||||||||||||||||||||||||||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 130 tagaatgacttacattgtgaaacggaggaagtagta 165
|||| ||||||||||||||||||||||| |||||||
Sbjct: 79 tagattgacttacattgtgaaacggagggagtagta 114
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 152 cggaggaagtag 163
||||||||||||
Sbjct: 129 cggaggaagtag 140
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 79 atgaatctagacata 65
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 109 bits (55), Expect = 1e-23
Identities = 99/116 (85%), Gaps = 12/116 (10%)
Strand = Plus / Minus
Query: 30 taagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatc 89
||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagaca-------- 53
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 52 ----tatattcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 101 bits (51), Expect = 3e-21
Identities = 98/116 (84%), Gaps = 12/116 (10%)
Strand = Plus / Plus
Query: 26 aatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagt 85
||||||||||||||||||||||| |||||||||||||||| |||||||| ||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaatata-------- 52
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgactta 141
| ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 53 ----tgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||
Sbjct: 3 ggtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgt 62
Query: 67 taatgaatcta 77
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||||| ||||||||||||||||||||| | |||| ||||| |||||| |||||||||
Sbjct: 81 tatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttacatt 22
Query: 146 gtgaaacggaggaagta 162
|||||||||||| ||||
Sbjct: 21 gtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 134 atgacttacattgtgaaacggaggaagtagtaa 166
|||||||||||||||||||||||| ||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtagtaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcat 37
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||||||| |||||| |||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||| ||| ||| | ||| | ||||||||||||| |||| ||||||||||| | ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
||||| | |||| | | |||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagtag 159
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| | | ||| |||||||||||| |||||| |||| | ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 58 tatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtga 117
Query: 150 aacggaggaagtag 163
|||||||| |||||
Sbjct: 118 aacggagggagtag 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||||||| |||||| | ||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||| ||||||||| || | |||||| |||||||||||||||| ||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 70 atgaatctagacata 56
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| | |||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 120 cggaggaagta 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||| ||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 69 atgaatctaga 79
|| ||| ||||
Sbjct: 65 ataaatttaga 75
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||| ||| ||||| |||||||| |||||| |||||| ||||||||||||||||||||
Sbjct: 77 tatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtga 18
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 107 bits (54), Expect = 5e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttaga-atgacttacat 144
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 82 tatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacat 23
Query: 145 tgtgaaacggaggaagta 162
||||||||||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 65 aatgaatctaga 76
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
|||||||||| || | ||| | ||||||||||||| ||| |||| |||||| | || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| |||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||| |||||| |||||||| | ||||||| || |||||||| |||| ||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| | | | |||||||||||| ||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 69 atgaat 74
||||||
Sbjct: 66 atgaat 61
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 157 gaagtagt 164
||||||||
Sbjct: 121 gaagtagt 128
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||| ||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
|||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 157 gaagtagtaa 166
||||||||||
Sbjct: 10 gaagtagtaa 1
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 69 atgaat 74
||||||
Sbjct: 65 atgaat 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
|||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 107 bits (54), Expect = 5e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 69 atgaatctagacat 82
||||||||| ||||
Sbjct: 64 atgaatctaaacat 77
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 104 aacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 132
Query: 164 t 164
|
Sbjct: 133 t 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 69 atgaatctagacat 82
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| ||||||||| ||| || |||||| || |||||||||||||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 69 atgaatctagacat 82
|| |||||||||||
Sbjct: 76 ataaatctagacat 63
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||| |||||||||||||||||| || |||||| || |||||||| ||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 126 cggaggaagta 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattca 57
|||||| ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 114 tgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | ||||| |||| || | | | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||||| ||| | | |||||||||||||||| | ||||||||| | ||||
Sbjct: 98 atgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | ||| |||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttgcattatgaaacggaggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||| |||| ||| | |||||||||| ||||||||||| | ||||||
Sbjct: 4 gtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||| ||| | ||| | |||||||||||||||||| || | | | | |||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagtag 163
||||||| | |||||||||||||||||||| |||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 69 atgaatcta 77
|||||||||
Sbjct: 66 atgaatcta 58
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 154 gaggaagtag 163
|||| |||||
Sbjct: 118 gagggagtag 127
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||| |||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 106 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagta 165
|||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtagta 2
Query: 166 a 166
|
Sbjct: 1 a 1
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 53
|||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 69 atgaatcta 77
|| ||||||
Sbjct: 79 ataaatcta 71
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||||| |||||| |||||||||||||| | |||| ||||| ||||||||||||||||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 146 gtgaaacggaggaagtagtaa 166
|||||||||||| ||||||||
Sbjct: 123 gtgaaacggagggagtagtaa 143
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||| |||
Sbjct: 81 tatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttatatt 22
Query: 146 gtgaaacggaggaagta 162
|||||||||||||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||| ||||||||||||| ||||| || ||| ||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgat 63
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttc 48
||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 129 gtactccctccgtttcataatgtaagtcattgtagcatttc 89
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 123 gaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||| || ||||||||||||| ||||||||||| ||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 69 atgaa 73
|||||
Sbjct: 61 atgaa 57
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 98 ttcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 157
||||||||||||| ||| |||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 158 aagta 162
||||
Sbjct: 117 gagta 121
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 69 atgaatctagacatag 84
|| |||||||||||||
Sbjct: 77 ataaatctagacatag 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||| ||||||||| ||||||||||| |||| |||||| ||||||||| |||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 127 cggagggagta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattca 57
|||| ||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 69 atgaatct 76
||||||||
Sbjct: 75 atgaatct 68
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 95 agattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 154
||||||||||| |||||| |||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 155 aggaagtag 163
|||||||||
Sbjct: 128 aggaagtag 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 69 atga 72
||||
Sbjct: 65 atga 68
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
||||||| |||||| |||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 159 agtagt 164
||||||
Sbjct: 8 agtagt 3
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 103 bits (52), Expect = 8e-22
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 160 gtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtt 101
Query: 68 aatgaatctagacatagttatctatctagattca-ttaacatcaatatgaatgtgagaaa 126
|||||||||||| ||| || | |||||||| | |||||||| ||||||||||| | ||
Sbjct: 100 aatgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaa 41
Query: 127 tgttagaatgacttacattgtgaaacggaggaagta 162
|| ||||| | |||| | | ||||||||||| ||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt- 67
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
||| |||||||||| || |||||||||||||||||||| ||||||||||| | |||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||| | | ||||||||||| ||||
Sbjct: 125 gctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 100 cattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaa 159
||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 160 gtag 163
||||
Sbjct: 7 gtag 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 69 atg 71
|||
Sbjct: 65 atg 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatt 46
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 aatgttagaatgacttacattgtgaaacgga 155
|||| ||||||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 20 tttcacaatgtaagtcattctagcatttcccacattcatattga 63
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 108 tcaatatgaatgtgagaaatgttagaatgacttacattgtg-aaacggaggaagtagta 165
|||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtagta 119
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtt 76
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 75 aatgaatctaga 64
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 150
|||||||||||||||||| ||||||||| || ||||| ||||| |||||||||||||||
Sbjct: 63 atctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaa 122
Query: 151 acggaggaagta 162
||||||||||||
Sbjct: 123 acggaggaagta 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||| ||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| ||||||||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 65 atgaatctagacata 79
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| ||||||||| ||| ||||||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||| ||||| ||||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 72 atgaatctagacata 58
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||||||||||| | |||| |||||||||||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Query: 152 cggaggaagta 162
||||||||||
Sbjct: 122 tggaggaagta 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||| ||||||||||||||||||||| || | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||||||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 69 atgaatctaga 79
|| ||| ||||
Sbjct: 65 ataaatttaga 75
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||| ||| ||||| |||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 77 tatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtga 18
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 69 atgaatctagacata 83
|| ||||||||||||
Sbjct: 74 ataaatctagacata 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||| ||||||||| ||||||||||| | |||| ||||| | ||||||||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 152 cggaggaagtagt 164
|||||||||||||
Sbjct: 124 cggaggaagtagt 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||| | |||||| | |||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 132/158 (83%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | ||||| |||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| | | || |||||||||||||||| ||| | || |||||| ||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 129 ttagaatgacttacattgtgaaacggaggaagtagtaa 166
|| || | |||||||||||||||||||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagtagtaa 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | || ||||||| ||||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||| ||| ||| | |||||||||||||||||| |||| ||||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
||||| | |||||||| ||||||||||| ||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||| |||||| ||| |||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||||| |||||| || ||||||||||||| ||||||||||| |||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 99.6 bits (50), Expect = 1e-20
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 157 gaagta 162
||||||
Sbjct: 10 gaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtt 62
Query: 68 aatgaat 74
|||||||
Sbjct: 63 aatgaat 69
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 13 ccctccgtttcacaatgtaagtcattctagcattt 47
|||||||||||||||||||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 113 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 157
|||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacggagg 107
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 69 atgaatctag 78
||||||||||
Sbjct: 71 atgaatctag 62
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 93 ctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 152
|||||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 153 ggaggaagta 162
||||| ||||
Sbjct: 122 ggagggagta 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 157
|||||||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
|||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 157 gaagta 162
||||||
Sbjct: 126 gaagta 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 69 atgaat 74
||||||
Sbjct: 71 atgaat 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcattt 47
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 124 aaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| || ||||||||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| ||||||||||||| ||||||||||||||||| || | ||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaa 134
|||||||||||| ||||||||||| | |||| |||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| ||||||||||||| ||||||||||||||||| ||| ||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaa 134
||||||||||||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | || |||| || ||||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||||||| ||| ||| |||||||||||||||| |||| ||||| | | ||
Sbjct: 65 atgaatctagaca----tatgtatttagattcattaacatctttatgtatgtgggtagtg 120
Query: 129 ttagaatgacttacattgtgaaacggaggaagtag 163
|| || | |||| ||||||||||||||| |||||
Sbjct: 121 ctaaaaagtcttatattgtgaaacggagggagtag 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||| | || ||||| | ||||||| |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| | | | | | |||||||||||||||||| | ||||||||| | || |
Sbjct: 94 atgaatctaaataca----tatgtctagattcattaacatctaaatgaatgtgggcaacg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|| || | |||||||||||||||||||||||||
Sbjct: 38 ctacaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||||
Sbjct: 141 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 82
Query: 68 aatgaatcta 77
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||| ||||||||||| | |||| ||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 97.6 bits (49), Expect = 5e-20
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 6 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacat 54
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 117 atgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatt 46
|||||||||||||||||||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||||| ||||||||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 69 atgaatctagaca 81
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||||
Sbjct: 143 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||| ||||||||||||| ||||||||||| | |||| ||||| | |||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 69 atgaatctagaca 81
|| ||||||||||
Sbjct: 80 ataaatctagaca 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||| ||||||||| ||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 152 cggaggaagtag 163
|||||| |||||
Sbjct: 130 cggagggagtag 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||||||||||||||||| | || ||||||| ||| |||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 97.6 bits (49), Expect = 5e-20
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 106 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 106 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||| ||||||| |||||||| ||||||||||||| |||||| |||| ||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||||| |||||| ||||||||||||| || ||||| |||||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 69 atgaatcta 77
|||||||||
Sbjct: 70 atgaatcta 62
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||||||||||||||| |||| || ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 154 gaggaagta 162
|||||||||
Sbjct: 122 gaggaagta 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| ||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 69 atga 72
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
||||||||||||||||||||||| || || || ||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 159 agta 162
||||
Sbjct: 8 agta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||| ||| || ||||||||||||||||||||||| |||| |||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 63
||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 108 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||| || ||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagtagt 164
|||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagtagt 106
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 16 tccgtttcacaatgtaagtcattctagcatt 46
||||||||||||| |||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| |||||| ||||||| ||||||||||||| ||||||| ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 69 atgaatctagac 80
||||||||||||
Sbjct: 72 atgaatctagac 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||||| ||||| | |||| |||||||| ||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 152 cggaggaagta 162
| |||| ||||
Sbjct: 122 cagagggagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||| ||||||||||| ||||||||||||||||||||| |||| || |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagtag 163
|||| |||||||||||||||| |||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 119 gtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 103 taacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||| |||||||| |||||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttc 48
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 93.7 bits (47), Expect = 7e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 55
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 17 ccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 116 aatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 154
|||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 93.7 bits (47), Expect = 7e-19
Identities = 79/90 (87%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctagat 98
|||||||||||||||||||||||||||| |||||||||||||| | | |||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacaga------tgtctagat 35
Query: 99 tcattaacatcaatatgaatgtgagaaatg 128
||||| ||||||||||||||||| ||||||
Sbjct: 34 tcattgacatcaatatgaatgtgggaaatg 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 76/86 (88%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 43 catttcccacattcatattgatgttaatgaatctagacatagttatctatctagattcat 102
|||||||||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagac------atctgtctagattcat 58
Query: 103 taacatcaatatgaatgtgagaaatg 128
| ||||||||||||||||| ||||||
Sbjct: 59 tgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||||||| | |||||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 65 atgaatctagacata 79
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| | ||||||||| |||| ||||| | ||||||||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
|||||||||| |||||| |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 133 gtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtt 74
Query: 68 aatgaatctagacat 82
|||||||||||||||
Sbjct: 73 aatgaatctagacat 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||||||||||| |||| ||||| | |||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 152 cggaggaagta 162
| |||| ||||
Sbjct: 122 cagagggagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||| |||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| ||||||||||| |||| ||||| | |||||||| ||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 93.7 bits (47), Expect = 7e-19
Identities = 102/123 (82%), Gaps = 13/123 (10%)
Strand = Plus / Minus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagttatct 90
||||||||||||||||||||||||||||||||||||||||| ||||||| | | |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 91 -------------atctagattcattaacatcaatatgaatgtgagaaatgttagaatga 137
|||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 63 agatacattaaccatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Query: 138 ctt 140
|||
Sbjct: 3 ctt 1
Score = 93.7 bits (47), Expect = 7e-19
Identities = 102/123 (82%), Gaps = 13/123 (10%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatctaga----------- 79
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatggttaatgta 60
Query: 80 --catagttatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatga 137
| | ||||||||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 61 tctagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Query: 138 ctt 140
|||
Sbjct: 121 ctt 123
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||| | |||||||||| ||||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 69 atgaatctagacata 83
||||||||| |||||
Sbjct: 76 atgaatctaaacata 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||| ||||| ||||| | |||| ||||| | |||| |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 154 gaggaagtag 163
|||| |||||
Sbjct: 128 gagggagtag 137
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||||||| |||| | |||||||||| ||||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 69 atgaatctagacata 83
||||||||| |||||
Sbjct: 65 atgaatctaaacata 79
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||| ||||| ||||| | |||| ||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 154 gaggaagtag 163
|||| |||||
Sbjct: 13 gagggagtag 4
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 93.7 bits (47), Expect = 7e-19
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctagat 98
|||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctaga-tta--tatctatctagat 35
Query: 99 tcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||||||| ||| ||||||
Sbjct: 34 tcattaatatcaatatgaacgtgggaaatg 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctagat 98
|||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctaga--tagatata-atctagat 57
Query: 99 tcattaacatcaatatgaatgtgagaaatg 128
||||||| ||||||||||| ||| ||||||
Sbjct: 58 tcattaatatcaatatgaacgtgggaaatg 87
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 59
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 112 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttc 48
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttc 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 122 agaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||| ||||||||||||||||||||||| |||| ||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 69 atgaatctagacata 83
|| ||| || |||||
Sbjct: 65 ataaatttatacata 79
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 101 attaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaag 160
||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 161 ta 162
||
Sbjct: 6 ta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcatt 38
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 aatgacttacattgtgaaacggaggaagta 162
|||| |||||||||||||||||||| ||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 63
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 108 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagta 165
|||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagta 117
Score = 87.7 bits (44), Expect = 4e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 64
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 107 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||| | |||||||||||||||| ||||| |||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 69 atgaatctagacata 83
||||||||||||||
Sbjct: 78 gtgaatctagacata 64
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||| ||||||| ||| ||||||| |||||||||||||||||||||| | |||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 128 cggagggagta 138
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtt 63
Query: 68 aa 69
||
Sbjct: 64 aa 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 102 ttaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagt 161
||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 162 a 162
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 102 ttaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagt 161
||||||||||||| ||| ||||||||| || ||||||||| |||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 162 a 162
|
Sbjct: 122 a 122
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||| ||||||||| || ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 69 a 69
|
Sbjct: 62 a 62
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 65
||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 106 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 155
||||||||||||| || |||||| |||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 73
||||||||||||||| ||||||||| |||||||| || ||||||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 74 tctagacata 83
||||||||||
Sbjct: 67 tctagacata 58
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 19 gtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| ||||||||||||| | ||||| || ||||||||| |||||||||
Sbjct: 62 tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121
Query: 152 cggaggaagt 161
||||||||||
Sbjct: 122 cggaggaagt 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||| | |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
||||||||| ||||||||||||| |||||||||||||||||||| | ||| | |||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctagacacatatatatgtctag 68
Query: 97 attcattaacatcaatatgaatgtg 121
||||||| ||||| |||||||||||
Sbjct: 69 attcatttacatctatatgaatgtg 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
||||||||| | ||||||||||| ||||| |||||||||||||||| ||| | |||||
Sbjct: 106 ttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgtgtctag 47
Query: 97 attcattaacatcaatatgaatgtg 121
||||||||||||| |||||||||||
Sbjct: 46 attcattaacatctatatgaatgtg 22
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacatt 55
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattc 56
||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 124 aaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||||||||||||||||||||||||| ||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 124 aaatgttagaatgacttacattgtgaaacggaggaagtagta 165
||||| ||||||||||| |||||||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagggagtagta 2
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 26 aatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagt 85
|||||||| | |||||||||| ||||||||||||| ||| |||||||||||| || |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||| | |||||||||||| |||| ||||||||||| | |||||||||| | ||||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 26 aatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacatagt 85
|||||||| | ||||| |||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
| | | |||||||||||| ||| ||||||||||| | |||| ||||| | ||||||||
Sbjct: 60 tgtgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 99 tcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagga 158
||||| |||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 159 agta 162
||||
Sbjct: 90 agta 93
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||| ||||| ||||||||||||||||||| |||||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 69 atga 72
||||
Sbjct: 33 atga 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcatt 38
||||| |||||||||||||| |||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 150
||||||||||||||||||| |||||||| |||| |||| ||||| |||||| ||| ||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17
Query: 151 acggaggaagtagta 165
|| ||||||||||||
Sbjct: 16 acagaggaagtagta 2
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| ||| |||| | |||||||||| |||| |||||||| |||| |
Sbjct: 141 gtactccctccgtttcataatataagactttctagcattacccatattcatatagatgct 82
Query: 68 aatgaatctaga 79
||||||||||||
Sbjct: 81 aatgaatctaga 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||| |||||| ||| |||||| |||||||||| | || |||||||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 150
|||||||||||||| |||| |||||||| || | |||| ||||| | |||| ||| ||||
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128
Query: 151 acggaggaagta 162
||||||| ||||
Sbjct: 129 acggagggagta 140
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 58
||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 53
|||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 124 aaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||| | |||||| || ||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||
Sbjct: 69 tctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaa 128
Query: 152 cggaggaagtagtaa 166
|||||||||||||||
Sbjct: 129 cggaggaagtagtaa 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 59
|||| ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||||||| ||||||||||||| ||||| | ||| ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 79 atgaatctagacata 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 112 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 72 atgaatctagacata 58
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||||||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 62 tctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaa 121
Query: 152 cggaggaagtag 163
|||||| |||||
Sbjct: 122 cggagggagtag 133
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 58
||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 18 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 74
|||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 113 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
|||||||| |||||||||||||||| |||||| || |||||||| ||||||| |||| |
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagg 108
Query: 157 gaagta 162
||||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
|||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtag 163
|||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 63
|||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 108 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||||||| |||| |||||||||||||||| ||||| ||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 54
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||||||||| ||| || |||| |||||||||||||||||||||||||| ||| |||
Sbjct: 77 tatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatga 18
Query: 150 aacggaggaagta 162
|||| ||||||||
Sbjct: 17 aacgaaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 117 atgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagta 165
||||| |||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtagta 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||| ||||||| ||| |||||||||||| |||||| |||||| |||| || ||
Sbjct: 4 gtacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatt 63
Query: 68 aatgaatctaga 79
| ||||||||||
Sbjct: 64 agtgaatctaga 75
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||| ||| ||| ||||||| ||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 69 atgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaatg 128
||||||||| ||| | ||| | |||||||||||| |||| ||||||||||| | ||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 129 ttagaatgacttacattgtgaaacggaggaagta 162
|||||| | |||| | | ||||||||||||||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtc 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaa 117
|||||||||||||||| ||| | | |||||||||| ||||| |||||||
Sbjct: 64 aatgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||| |||||||| | |||||||||| |||||||||||| |||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 72 aatctagaca 81
||||||||||
Sbjct: 45 aatctagaca 36
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||| |||||||| ||||||||||| |||| ||||| | |||||||| |||||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 152 cggagg 157
||||||
Sbjct: 98 cggagg 103
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 cttacattgtgaaacggaggaagtag 163
|||||||| |||||||||||||||||
Sbjct: 29 cttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| |||| |||||||| |||||||||||||||| |||| ||| | ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaa 134
||||||||||||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| ||||||||||||| ||||||||||||||||| |||| | | | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 97 attcattaacatcaatatgaat 118
|||||||||||| ||||||||
Sbjct: 46 attcattaacatatatatgaat 25
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||||||| ||||||||||||||||||| || || |||||||| ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 72 aatcta 77
||||||
Sbjct: 68 aatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||| |||||||| || ||||||||| |||||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 154 gagg 157
||||
Sbjct: 13 gagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 103 taacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||| |||||||||| ||||| || ||||||||| ||||||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||
Sbjct: 138 gtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtt 79
Query: 68 a 68
|
Sbjct: 78 a 78
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 69 atgaatctagacat 82
||||||||||||||
Sbjct: 66 atgaatctagacat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 152 cggaggaagta 162
|||||||||||
Sbjct: 116 cggaggaagta 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 58
||||||||||||||||| | | |||| |||||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcatattataagattttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 88/104 (84%), Gaps = 6/104 (5%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctaga------catagttatct 90
|||||||||| ||||||||||||| |||||||||||||||||| ||| | || |
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgt 64
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaa 134
|||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 89/104 (85%), Gaps = 6/104 (5%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagt--tatc----t 90
||||| |||| ||||||||||||| |||||||||||||||||||| | | |||| |
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatccatat 49
Query: 91 atctagattcattaacatcaatatgaatgtgagaaatgttagaa 134
||||||||||||||||||| ||||||||||| | |||| |||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| ||||||| | || ||||||| ||||||||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 69 atgaatctagaca 81
|||||| ||||||
Sbjct: 82 atgaatttagaca 70
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 66
||||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||| ||||||||||||| ||||||||||| | |||| || || | ||||||| |||||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 132 cggagggagta 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 105 acatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| ||||||||||| | |||| ||||| | |||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcatt 38
||||||||||||||||||||||||||||||||
Sbjct: 3 ggtactccctccgtttcacaatgtaagtcatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 133 aatgacttacattgtgaaacggaggaagta 162
||||||||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 31 aagtcattctagcatttcccacattcatattgatgttaatgaatc 75
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 34 tcattctagcatttcccacattcatattgatgttaatgaatc 75
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 96 gattcattaacatcaatatgaatgtgagaaatgttagaatgactt 140
||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 96 gattcattaacatcaatatgaatgtgagaaatgttagaatga 137
||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| ||||||||||||| ||||||||||||||||| || | || | |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 97 attcattaacatcaatatgaatgtg 121
|||||||||||| |||||||||||
Sbjct: 46 attcattaacatatatatgaatgtg 22
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 37 ttctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctag 96
|||||||||| |||||||||||| |||||||||||||||||||| | | | ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaa 134
||||||||||||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 16 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 75
|||||||||||||||||| | |||||||||| ||||||||||||| ||| ||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 76 tagacata 83
||||||||
Sbjct: 59 tagacata 52
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||| |||||||| ||| ||||||||||| | |||| ||||| | ||||||||||||||
Sbjct: 56 tctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 115
Query: 152 cggaggaagta 162
|||| ||||||
Sbjct: 116 cggatgaagta 126
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| |||||||||||||||| ||| |||| || ||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 69 atgaatctagac 80
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||| ||| ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 152 cggaggaagtagt 164
|||||| ||||||
Sbjct: 15 cggagggagtagt 3
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
||||| ||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 137 gtacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 125 aatgttagaatgacttacattgtgaaacggaggaagta 162
|||| |||||||||||||||| ||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||| |||||||||| |||||||| | |||||||||| ||| ||| |||| |||||||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 77 atgaatctagacata 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| |||| ||| || |||| ||||| | |||||||| |||||
Sbjct: 67 tctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaa 126
Query: 152 cggag 156
|||||
Sbjct: 127 cggag 131
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 69 atgaatctagacata 83
|||||||||||||||
Sbjct: 78 atgaatctagacata 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 68 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 127
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 128 cggagggagta 138
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||||||||||||||||||| |||||||||| ||||||| | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 69 atgaatctagacata 83
||||||||| |||||
Sbjct: 65 atgaatctaaacata 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 113 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagt 164
||||||||||| |||| ||||| | |||| |||||| |||||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagtagt 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 94 tagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 153
|||||||||||||||| || | ||||| | |||| ||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
||||||||| |||||| |||||||| | |||||||||| |||||||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 69 atgaatctaga 79
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
|||||||||||||||||| ||| |||||| | |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 152 cggaggaagtagt 164
| |||| ||||||
Sbjct: 15 ctgagggagtagt 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||||||||| | |||| ||||| | |||||||| ||||| ||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||| |||| ||| |||| | |||||||||| ||||| |||| || |||||
Sbjct: 159 gtacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtc 100
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||||||||||||| | || | | ||||| |||||||||| |||||||||| | | |
Sbjct: 99 aatgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagt 40
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||||||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||||||||||||||| |||||||| | |||||||| | |||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtt 63
Query: 68 aatgaatctagacatagttatctatctagattcattaacatcaatatgaatgtgagaaat 127
|||| ||||| ||| || | |||||||||||| ||||| || |||| ||| | |||
Sbjct: 64 aatggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaat 123
Query: 128 gttagaatgacttacattgtgaaacggaggaagta 162
| ||||| | |||| ||| |||| |||||||||||
Sbjct: 124 gctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||| ||||| |||||||| | |||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 69 atgaatctaga 79
|| ||||||||
Sbjct: 65 ataaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 90 tatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtga 149
|||||||||| ||||||||| ||||||||||| |||| ||||| | |||||||| |||
Sbjct: 77 tatctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 18
Query: 150 aacggaggaagta 162
|| ||||| ||||
Sbjct: 17 aatggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatt 46
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 101 attaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaag 160
||||| |||||||| ||||||| |||| ||||||||||| |||||||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 161 ta 162
||
Sbjct: 107 ta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||| |||||||||||||||| |||||||||||| |||| |||||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 69 at 70
||
Sbjct: 48 at 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattcta 41
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 130 tagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
||||||||||||| ||||| || |||| |||| || |||| |||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 157 gaagta 162
||||||
Sbjct: 132 gaagta 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||| |||| ||||||| | || || ||||| ||||||
Sbjct: 138 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 79
Query: 68 aatgaat 74
|||||||
Sbjct: 78 aatgaat 72
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| | ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 69 atgaatctagacat 82
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||||| | ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Query: 152 cggaggaagtagta 165
|||||| |||||||
Sbjct: 15 cggagggagtagta 2
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 68
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| | ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 69 atgaatctagacat 82
||||||||||||||
Sbjct: 68 atgaatctagacat 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||||||||| | ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 58 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 117
Query: 152 cggaggaagtagta 165
|||||| |||||||
Sbjct: 118 cggagggagtagta 131
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagcatttc 48
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 123 gaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 116 aatgtgagaaatgttagaatgacttacattgtgaaacggaggaagtagt 164
||||||||||||| || ||||||||| ||| ||||||||| | ||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacggatggagtagt 93
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 54
|||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 7 ggtactccctccgtttcacaatgtaagtcattctagc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggtactccctccgtttcacaatgtaagtcattctagc 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 117 atgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
||||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 130 tagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||| ||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 97 attcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 156
||||||||||||| ||||| || |||| |||| || |||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 157 gaagta 162
||||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 8 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 67
||||| |||||||||||||||||||| |||| ||||||| | || || ||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 63
Query: 68 aatgaat 74
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 75.8 bits (38), Expect = 2e-13
Identities = 69/79 (87%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 43 catttcccacattcatattgatgttaatgaatctagacatagttatctatctagattcat 102
|||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagaca----tatatatctagattcat 60
Query: 103 taacatcaatatgaatgtg 121
|||||| |||||||||||
Sbjct: 61 taacatatatatgaatgtg 79
Score = 71.9 bits (36), Expect = 3e-12
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 39 ctagcatttcccacattcatattgatgttaatgaatctagacatagttatctatctagat 98
|||||||| ||||||||||||| ||||||||||||||||| | ||| | |||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagata----tatatgtctagat 35
Query: 99 tcattaacatcaatatgaatgtgagaaatgtta 131
|||||||||| ||||||||||| | |||||||
Sbjct: 34 tcattaacatatatatgaatgtgggcaatgtta 2
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 12 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 71
||||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 72 aatctagaca 81
||||||||||
Sbjct: 68 aatctagaca 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 151
||||||||| |||||||| |||||||| || |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaa 16
Query: 152 cggagg 157
||||||
Sbjct: 15 cggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 cttacattgtgaaacggaggaagtag 163
|||||||| |||||||||||||||||
Sbjct: 84 cttacattatgaaacggaggaagtag 109
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 110 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||||||||| ||||| || ||| ||||||||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 61
|||| ||||||||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 86 tatctatctagattcattaacatcaatatgaatgtgagaaatgttagaatgacttacatt 145
||||| ||||||||||||||||| ||| | ||| ||| ||||| || ||||||||| |||
Sbjct: 81 tatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatatt 22
Query: 146 gtgaaacggaggaagta 162
|||||||||| ||||||
Sbjct: 21 gtgaaacggaagaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 111 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 157
|||||||||||| |||||||| ||||||||| |||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 16 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 75
||||||||||||| ||||||||| |||||||| || ||| | ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 76 tagaca 81
||||||
Sbjct: 72 tagaca 77
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 13 ccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 60
|||||||||||||||| ||||||||| || ||||| |||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 15 ctccgtttcacaatgtaagtcattctagcatttcccacatt 55
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 130 tagaatgacttacattgtgaaacggaggaagta 162
|||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 123 gaaatgttagaatgacttacattgtgaaacggaggaagta 162
|||||| ||||||||||||||||||||||||||| |||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 9 tactccctccgtttcacaatgtaagtcattctag 42
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
