miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 210 bits (106), Expect = 4e-54
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| |||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||| | ||| |||||||| |||| |||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||| | || |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| |||||| | |||| |||||||| ||| |||||||||||||||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| || ||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||||| |||| |||||||||||| ||||||||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | | |||| |||||| |||||||| ||| ||||| ||| || ||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||| ||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||||||| |||||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | | || |||||||| ||||||||||||| || |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| |||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||| | ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | | |||||| | |||| |||||||| ||||| |||||||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || |||| | |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| |||||||||||||||| | ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| || |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||| |||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| || ||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||||| |||||| |||||||| ||| |||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| | ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| |||||| |||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| ||||||| ||||| ||||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||||||||| ||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 133/147 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| | |||||| || || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacgga 147
|||||||| ||| |||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||||| |||||| | |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 178 bits (90), Expect = 1e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||| ||| | ||| |||||||| |||||||||||||||| ||||||
Sbjct: 97 atgaatctaaacatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| || ||| || | | || |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||| |||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||||||||||||||| |||||||| | |||||||||||||| ||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| | ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||||||||||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||| ||||||||| ||| |||||||||| | |||||| |||||||||||| ||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| ||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacgga 147
| |||||| ||| ||| |||||||||
Sbjct: 125 gtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||| ||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||||||| || |||||||| |||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||| |||||| |||||||||||| ||||| ||||||||||||| || |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | | |||||| | |||| |||||||| || |||||| |||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 176 bits (89), Expect = 6e-44
Identities = 141/158 (89%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||| | ||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 61 atgaatctagacatatatatctatctaaattcattaccatca----atatgaatgtgaga 116
||||||||||||||||||||||||||| |||||||| ||||| ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||| ||| ||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 135/158 (85%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat----taat 56
|||| ||||||||||||||| |||||||||||| |||||| || ||||||| | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 57 gttaatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgaga 116
||||||||||||||| | |||||| | |||| |||||||| ||||| |||||||||| ||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| | |||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||| ||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||| ||||||| |||||||||||| |||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| ||||||||| |||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
| ||||| ||| ||||||||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || |||||||||||| |||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||| |||| |||||||| || | |||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||| |||||| |||||||||||| ||||||||| ||||||||| ||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| | |||| |||||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||| |||| | |||||||||||| |||| || ||||||||| ||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||| | |||||| | | || |||||||| ||||||||||||| |||||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| |||||| |||||||| ||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| | |||||| |||||||| ||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| ||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||| |||||| | |||||| | |||| |||||||| ||||||||||||| | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||| || ||||||| |||| || |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| ||| ||| | |||||| | |||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||| ||||| ||| || |||||| | |||| ||||||||||| ||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | ||||||| | |||| |||||||| |||| ||||||||||||||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| | ||||||||||||| ||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| ||||||| |||||||||||| |||||||| ||||||||||||| | ||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| | ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | ||||| | |||| |||||||| |||||||||||||| | | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||| | |||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||||||| || ||| |||| ||||||||| ||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||| ||||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| |||||| | | |||||| | |||| |||||||| ||||||||||||| || ||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
| |||||| ||| ||||||||||||||| ||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| ||||||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| |||||||| | ||||||||||||| ||| | |||||||||| ||||||
Sbjct: 96 atgaatctag--atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||| ||| ||||||||||||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaacggaggaagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||||| |||||| |||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||||||||||| |||||| |||||||| ||| | ||||||||||| |||||
Sbjct: 65 atgaatttagacatatata--tatctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 165 bits (83), Expect = 2e-40
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatct 82
||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
||||| |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatga 4
Score = 133 bits (67), Expect = 8e-31
Identities = 97/107 (90%)
Strand = Plus / Plus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatct 82
||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
|||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||| | |||||| || ||||||||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||||||| || ||| |||| ||||||||| ||||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| |||||| | | |||||| | |||| |||||||| ||||||||||||| || ||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
| |||||| ||| ||||||||||||||| ||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 165 bits (83), Expect = 2e-40
Identities = 136/154 (88%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||
Sbjct: 92 atgaatctagacata------tatctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| |||| | |||| |||||||| ||||||||||||||| ||||||
Sbjct: 65 atgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 165 bits (83), Expect = 2e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||| |||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||| | |||| |||||||| ||||||||||||||| |||||
Sbjct: 96 atgaatctagacatatata--tgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||||||||
Sbjct: 38 ctagaatgacttacattgtggaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||| |||||| |||||||||||| ||||| ||||||||||| ||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||||||||||| | |||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatgtagacatatata--tgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||| ||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 155 bits (78), Expect = 2e-37
Identities = 108/118 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaa 118
||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||| ||||| ||||| |||||| |||| |||||||||||| || |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| |||||||| |||||||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||| ||||||| | ||| |||||||| |||| ||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| || ||||||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| || ||||||||| |||| ||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| ||||||||| |||| |||||||| |||||||||||||||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||||||||| ||||||||| | |||||| |||||| ||||| |||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||| |||||||| |||||||| ||||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| |||||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||||||||| ||||||||| || |||||| |||||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | | |||| | |||| |||||| | ||||||||| |||||| ||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
| ||||| ||| |||||||||||||| ||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatg 63
||||||||||||||||| |||||||||||| ||| ||||||||||||||| | | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 64 aatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgtta 123
|||||||||||| |||| | |||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 124 gaatgatttaaattgtgaaacggagg 149
|||||| ||| |||||||||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
Score = 151 bits (76), Expect = 3e-36
Identities = 128/146 (87%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatg 63
||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 64 aatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgtta 123
||||||||||||||| | | |||| ||||| ||||||||||||||||| ||| ||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 124 gaatgatttaaattgtgaaacggagg 149
|||||| ||| |||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||| ||||| |||||| |||||||| || | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacgga 147
||||||||| ||| ||| || ||||||
Sbjct: 38 ttagaatgacttacattatggaacgga 12
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||| |||||| || ||| |||||||||||| |||||| ||||||||||| |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||||||| | |||| |||||||| || | ||||||||||| |||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| ||| || ||||| ||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||| ||||||| ||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 96 atgaatctggacatatgc--ctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| ||| || | || | |||||||| ||||||||| || ||| ||||||
Sbjct: 65 atgaatctag--ataggcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 149 bits (75), Expect = 1e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatct 82
||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
|| || |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
Score = 117 bits (59), Expect = 5e-26
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatct 82
||||||||||| |||||| |||||||||||| ||||||||||||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
|||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 4
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||| |||||| |||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| ||||||| |||| ||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 147 bits (74), Expect = 5e-35
Identities = 133/154 (86%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||| |||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
Score = 147 bits (74), Expect = 5e-35
Identities = 133/154 (86%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||| |||||||| |||||||||||||||| ||||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 143 bits (72), Expect = 8e-34
Identities = 134/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||| | |||||| |||||||||||| ||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||| |||||||| |||||||||||| |||||||| ||||||||||||||| |||||
Sbjct: 95 atggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 129/154 (83%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | ||||| |||| || |||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
| |||||| ||| ||| ||||||||||| ||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| ||||||| ||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat-gtgagaaat 119
||||||||||||||||||||||||||| |||||||| ||||||||| | |||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtga-aaat 40
Query: 120 gttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcac-attcatattaatgtt 59
|||||||||||||||||||| |||||||||||| |||| |||| | ||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt-tcactagaaatattgatgtt 63
Query: 60 aatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaat 119
|||||||||||| | |||||| | |||| |||||||| ||||||||||||||| |||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 120 gttagaatgatttaaattgtgaaacggaggaagta 154
||||||| ||| ||||||||||||||| ||||
Sbjct: 124 actagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 3e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||| |||| |||| ||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagac------atctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
Score = 141 bits (71), Expect = 3e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||||| |||||||||||| |||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | | |||| ||||||| |||||||||||||||| ||||||
Sbjct: 92 atgaatctagacaga------tgtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 141 bits (71), Expect = 3e-33
Identities = 126/146 (86%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 121 ttagaatgatttaaattgtgaaacgg 146
|||||||| ||| ||||||||||||
Sbjct: 115 ctagaatgacttacattgtgaaacgg 140
Score = 117 bits (59), Expect = 5e-26
Identities = 129/154 (83%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||| |||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||| |||||| | |||| |||||||| ||| ||||| |||||| ||||||
Sbjct: 88 atga----------atatatatgtctagattcattaacattaatataaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||| | || |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | || | ||||||||||||||| |||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||| | ||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||| ||| || | | |||| |||||||| |||| |||||||| || | ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||| |||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | |||||| | |||| ||||||| |||| ||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||| | | |||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||||| | || |||||| |||||||| |||| ||||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| || | ||||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||| | | | |||| |||||||| |||| |||||||| | | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||| |||||| ||||| ||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||| |||||||||||| ||||||| | |||||||||||||
Sbjct: 92 atgaatctagagatatat------ctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || ||||||||||||| | ||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||| ||||||| ||| |||||||| ||||||||| |||||| |||||
Sbjct: 65 atgaatttaga----tatatct--ctagattcattagcatcaatataaatgtggaaaatg 118
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||| ||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||| |||||||||||| |||||| |||||||||||||||| ||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
Score = 101 bits (51), Expect = 3e-21
Identities = 128/154 (83%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| | ||| |||||||||||| ||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||| | |||| | ||| || | |||| || |||||||||||||||| |||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 133 bits (67), Expect = 8e-31
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatcta 87
|||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatcta 91
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 64 aatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgtta 123
|||||||| | |||||| | |||| |||||||| ||||||||||||| ||||||||| ||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 124 gaatgatttaaattgtgaaacggaggaagta 154
|||||| ||| ||| ||||||||||| ||||
Sbjct: 35 gaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||| | |||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | || | ||||||||||||||| |||| |||| ||||| | ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||| | ||||| |||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||| ||| || | | |||| |||||||| |||| |||||||||| | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||| | | |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||| | || |||||| |||||||| |||| ||||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| || | ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||| | | |||||| |||||||| |||| |||||||| | | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 131/153 (85%)
Strand = Plus / Minus
Query: 2 actccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaa 61
||||||||||||||| ||| |||||||||||| |||||| ||||||||||| | ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 62 tgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgt 121
||||||||||||||||||||||| || ||||| || | || |||||||| | ||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 122 tagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||||| | |||||||| | ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||| | | |||||| | |||| ||||| || | || ||||||||||| ||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggagg 149
|||||||| ||| ||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 131/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| || ||||||||| ||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||| |||||||||||| |||||| |||| ||||||||||| |||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||| | |||| | ||| || | |||| || ||||||||||||| || |||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| | |||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| || |||||| | | ||||||||||| |||| ||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| || |||||||||| | || |||||||| |||| |||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | | ||| |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | |||| |||||| |||||||| |||| || |||||||| | ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||| || | ||| ||||||||||||||| ||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | || || |||| | |||||||| || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||| | | |||| |||||||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||| | | ||| ||||||||||||||| ||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| |||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| |||||| | |||| |||||||| |||| ||||||||||| | |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| || ||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||| ||||| ||| | ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||| | |||| |||||||| |||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 94/104 (90%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || |||||| || ||||||||| ||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaat 104
|||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 89 atgaatctagacat--atatctatctagattcattaacatcaat 48
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 55 atgttaatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtga 114
||||||||||||||||| | |||||| | ||| |||||||| ||||||||||||| ||
Sbjct: 52 atgttaatgaatctagatagatatatgt--ctagattcattaacatcaatatgaatatgg 109
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| || ||||| ||| ||||||||||||||| ||||
Sbjct: 110 gaaatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||| || ||||| |||||||||||| ||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||||| | ||| |||||||| |||| | ||||||||| ||||||
Sbjct: 96 atgaatctatgcatatata--tgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| ||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||| |||||||||||| | || |||||||| |||| |||||||||||| |||||
Sbjct: 65 atgaatcaagacatatatatgca--tagattcattaacatctatatgaatgtgaaaaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| || ||| ||||||||||| ||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatata 79
|||||||||||||||||||
Sbjct: 65 atgaatctagacatatata 83
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 15 cggaggtagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||| ||||||||||||||| |||||||||||| |||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcattt 102
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatg 63
||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 64 aatctagacatata 77
||||||||||||||
Sbjct: 75 aatctagacatata 62
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| ||||||| ||| ||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 144 cggagg 149
||||||
Sbjct: 128 cggagg 133
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 9/155 (5%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaa-attcattaccatcaatatgaatgtgagaaat 119
||||| | || |||||| ||| ||||||| ||||||||| |||||| |||||
Sbjct: 65 atgaaac--------tacatctatttaagtttcattaacatcaatataaatgtgggaaat 116
Query: 120 gttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 117 actagaatgacttacattgtgaaacggaggaagta 151
Score = 87.7 bits (44), Expect = 4e-17
Identities = 126/154 (81%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||| || || || || || ||||||| |||||||||||||||| |||||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | || || |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | |||| | |||| |||||||| |||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||| | | |||| |||||||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| || | ||| ||| ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | || || |||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| | |||| | |||| |||||||| |||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||||| | | |||| |||||||| |||| ||||||||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| || | ||| ||| ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||| ||||||| || |||||||| |||||||||||||||| |||||
Sbjct: 86 atgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | |||| ||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||||||| |||| ||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||| ||||||| ||| ||| ||||| |||||||||||||||| ||||||
Sbjct: 65 atgtatctagatatagata------------cattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagta 146
Score = 97.6 bits (49), Expect = 4e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||| |||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||| ||||| |||||| || ||||| |||||||||||||||| |||||
Sbjct: 86 atgtatcta------------tatctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 7e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatata 77
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagt 26
|||||||||||||||||||| |||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 61 atgaatctagacatat 76
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 61 at 62
||
Sbjct: 65 at 66
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 134
Query: 149 gaagta 154
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| ||| |||||||||||| |||||| |||||||| ||| |||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 120 aacggagggagta 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| ||| |||||||||||| |||||| |||||||| ||| |||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| |||||||||||||||| ||||||||||||||| ||| |||||||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 123 aacggagggagta 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 61 atgaatctagacatatata 79
|||||||||||||||||||
Sbjct: 75 atgaatctagacatatata 57
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| || |||||||||||| |||||| |||||||| ||| |||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 125 cggaggaagta 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatta 54
|||||||||| ||||||||| |||||||||||| |||||| |||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatta 58
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| |||||| |||||||| ||| ||||||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
||||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||| ||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 137 tgtgaaacggaggaagta 154
||||||||||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| |||||||||||||||||||||| |||||||| ||| |||||||
Sbjct: 77 tatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtga 18
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 67 atgaatctaga 57
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 81 ctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtg 140
||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 141 aaacggaggaagta 154
||||||||||||||
Sbjct: 114 aaacggaggaagta 127
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttc 40
|||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 107 bits (54), Expect = 4e-23
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| |||||||| | || ||||||| |||||||||||||||| ||||||
Sbjct: 85 ataaatctagatagatctatctat-------------catcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 79 atctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattg 138
||||||||| ||| |||| ||||||||| ||| ||||||||| |||||||| ||| ||||
Sbjct: 70 atctatctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattg 129
Query: 139 tgaaacggaggaagta 154
||||||||||| ||||
Sbjct: 130 tgaaacggagggagta 145
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| ||||||||| || |||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||| | | |||||| |||||||| |||| ||||| || || | || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| | || | || || ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||| | || | | || ||||||||||||| ||||||||||| | ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||| ||||||||||| ||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| || ||||||||| ||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 79 atgaatctagaca 67
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| ||||||||||||| || |||||| |||||||| ||| |||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 129 cggagggagta 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatg 57
|||| ||||||||||| ||| |||||||||||| |||||| || |||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatgttaatg 61
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 126/153 (82%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| || ||||||||| ||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||| ||| |||| ||||||||| |||||||||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagt 153
|||||||| ||| ||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 6 cctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaa 65
||||||||||| ||| |||||||||||| ||||||||||||| ||||| |||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 66 tctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttaga 125
||||| |||| |||||||| ||||||||||||| || ||||| ||||
Sbjct: 70 tctag-------------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 126 atgatttaaattgtgaaacggaggaagta 154
|||| ||| ||||||||||||||| ||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 127/154 (82%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||| |||||| ||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| |||||||||||||| ||||||||| ||||| |||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatataaatgtagaaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||||||| ||||||||||||||| ||||
Sbjct: 113 ctaaaatgatttacattgtgaaacggagggagta 146
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaa 142
||||| |||||||| ||||||||||||||||| ||||| |||||| | ||| ||||||||
Sbjct: 76 atctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaa 17
Query: 143 acggaggaagta 154
||||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||| | ||| || | || |||||||| |||||||||||||||| |||||
Sbjct: 89 atgaaac--------tatgtc-acatagattcattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 127/157 (80%), Gaps = 15/157 (9%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatcta---gacatatatatctatctaaattcattaccatcaatatgaatgtgagaa 117
||||||||| |||| || ||||||| ||||||||||||||||||||
Sbjct: 65 atgaatctatgtgaca------------tagtttcattaacatcaatatgaatgtgagaa 112
Query: 118 atgttagaatgatttaaattgtgaaacggaggaagta 154
||| |||||||| ||| |||||||||| |||| ||||
Sbjct: 113 atgctagaatgacttacattgtgaaaccgagggagta 149
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 127/154 (82%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| || ||| ||||| || |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | |||| |||||||| |||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaatc 67
||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 68 taga 71
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| ||||||||||||| || |||||| |||||||| ||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatg 57
|||| ||||||||||| ||| |||||||||||| |||||| || |||||| ||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatgttaatg 83
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 127/154 (82%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||| ||| ||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctaga------------tctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| ||||||||||||||| ||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
Score = 73.8 bits (37), Expect = 6e-13
Identities = 123/154 (79%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||| |||||||| ||||| ||||||||||| ||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| ||| ||||| |||||||| ||||||||| ||| ||| ||||
Sbjct: 86 atgaatttag------------atctagattcattagcatcaatataaatatgaaaaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 87 atgaatctagaca 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||||||||| || ||||| ||| |||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 137 cggagggagta 147
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 61 atgaatctagacatat 76
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 61 at 62
||
Sbjct: 65 at 66
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| ||||| |||||||| ||| ||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 149 gaagta 154
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaatc 67
||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 68 taga 71
||||
Sbjct: 72 taga 75
Score = 97.6 bits (49), Expect = 4e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||| || ||| ||||| || |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | |||| |||||||| |||||||||||||||||||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||| |||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatat 76
||||||||| ||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/148 (81%), Gaps = 15/148 (10%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||| |||||||||||||| |||||||||||| ||||| ||||||| ||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtta 91
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| || | || |||||||| |||||||||||||||| ||||||
Sbjct: 90 atgaatctagatatgtttag--------attcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggag 148
||||||||| ||| ||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggag 11
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 71 acatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgat 130
||||||||||||||||| |||||||| ||||||||| ||| |||||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 131 ttaaattgtgaaacggaggaagta 154
||| ||||||||||||||||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||||| ||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 61 atgaatctagacatatatat 80
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttc 40
|||||||||||||||| ||| ||||||||| || ||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 61 atgaatc 67
|||||||
Sbjct: 81 atgaatc 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatc 67
|||||||
Sbjct: 65 atgaatc 71
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggag 135
Query: 149 gaagta 154
| ||||
Sbjct: 136 ggagta 141
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||| ||||| |||||||| ||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 108 aatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| ||||||||||||||| || ||| ||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacatt 47
|||| ||||||||||| ||| ||||||||||| |||||| ||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||||| || ||||||||| ||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 80 atgaatctaga 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaa 142
||||| |||||||| ||||||||||||| || |||||| |||||||| ||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 143 acggaggaagta 154
||||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 61 atgaatctagacatatat 78
||| ||||||||||||||
Sbjct: 69 atggatctagacatatat 52
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 92 cattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaa 151
||||| |||||||||||||||| |||||| |||||||| ||| ||| |||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 152 gta 154
|||
Sbjct: 127 gta 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagt 26
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
||||||
Sbjct: 10 gaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 61 atgaatct 68
||||||||
Sbjct: 65 atgaatct 72
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 61 at 62
||
Sbjct: 77 at 76
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 attaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaag 152
|||| |||||||||||||||| |||||| |||||||| ||| |||||||||||||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 153 ta 154
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 129
Query: 149 gaagta 154
||||||
Sbjct: 130 gaagta 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 61 atgaatct 68
||||||||
Sbjct: 75 atgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| ||||||| || |||||||||||| ||||||||||||||||||| ||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 91 tcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagga 150
|||||| ||||||||||||||||||||||| |||||||| ||| || ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| ||| | ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat 110
|||||||||||||||||| | ||||||||||||| |||| ||||||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaat 49
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| | | | || |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||||| |||| | |||| |||||||| |||| ||||||||||| | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 61 atgaatctag 70
||||||||||
Sbjct: 71 atgaatctag 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||| |||| ||||| |||||||| ||| ||||||||||||||
Sbjct: 66 attcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggag 125
Query: 149 gaagta 154
| ||||
Sbjct: 126 ggagta 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagg 149
|||||||| ||||||||| |||||||| ||| |||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||| ||| ||||||||| || ||||| ||||||||| | ||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||| || || ||||| || |||| |||| ||| |||||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||||||| ||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||| || ||||| | |||| ||||| || |||| | ||||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||| |||||| |||| ||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 61 atgaatctagacatatat 78
||||||||||||||||||
Sbjct: 70 atgaatctagacatatat 53
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||| ||||||||||||||| ||||| |||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||||| |||||| | ||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 61 atgaatctagacatatat 78
||||||||||||| ||||
Sbjct: 65 atgaatctagacaaatat 82
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||| ||||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||||||| |||||||| ||| ||| ||||| ||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 27 cattctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatct 86
||||||| ||||| ||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 87 aaattcattaccatcaatatgaatgtgagaaatgttagaatg 128
| |||||||| || | ||||||||||| ||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 27 cattctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatct 86
||||||| |||||| ||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 87 aaattcattaccatcaatatgaatgtgagaaatgttagaatg 128
| |||||||| || | ||||||||||| ||||| |||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| ||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtt 59
|||||||||||||||| ||| |||||||||||| |||||| |||||||||||| |||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| |||||| |||||||| ||| ||| ||||||||||| ||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| ||||||||| || |||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| ||||| |||||||| ||||||||||||| | |||||
Sbjct: 65 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||||||||
Sbjct: 113 ctagaatgacttatattgtggaacggaggaagta 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/154 (80%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||| |||||| |||||||||||| ||||| | ||||||||| ||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||| |||||||| |||||||||||||||| ||||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||| ||||||||||| ||||
Sbjct: 38 gtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 61 atgaatcta 69
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||| ||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| ||||||||| || |||||| |||||||||||| ||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| ||||| |||||||| ||||||||||||| | |||||
Sbjct: 86 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| |||||| |||||||||||||
Sbjct: 38 ctagaatgacttatattgtggaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/154 (80%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||||||| |||||| |||||||||||| ||||| | ||||||||| ||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| |||| |||||||| |||||||||||||||| ||||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| ||| ||| ||||||||||| ||||
Sbjct: 113 gtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 61 atgaatcta 69
|||||||||
Sbjct: 70 atgaatcta 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||| |||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 124
Query: 149 gaagta 154
| ||||
Sbjct: 125 ggagta 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||| |||||||||| ||||||||| || ||||| |||||||||||| ||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 61 at 62
||
Sbjct: 61 at 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 93 attaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaag 152
|||| |||||||||||||||| ||||| || ||||| ||| |||||||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 153 ta 154
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 61 atgaatctagacatata 77
|||||||||||||||||
Sbjct: 79 atgaatctagacatata 63
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||||||||||||||| |||||||||||||| ||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 129 cggaggaagta 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||| ||||||| || || ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/151 (83%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||| | ||||||| ||| || ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| || |||||| | | | |||||||| |||| ||||||||||| | ||||
Sbjct: 96 atgaatctagccacatatatgt--ccagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaa 151
|||||||| ||| ||| |||||||||||||
Sbjct: 38 ctagaatgacttatattatgaaacggaggaa 8
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 6 cctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaa 65
||||||||||| ||| |||||||||||| |||| | ||||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 66 tctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttaga 125
||| ||||||||| | ||| |||||||| ||| ||| ||||||| | ||| ||||
Sbjct: 70 tctggacatatatgtgg--ctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 126 atgatttaaattgtgaaacggaggaagta 154
|||| ||| ||||||||||||||| ||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||||| ||||||||||| ||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 63 atgaatctaga 53
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| ||||||||||||||| |||||| |||||||| ||| ||| |||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 111 aacggagggagta 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||| ||||||||||||||| |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 116 aaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 7e-19
Identities = 91/108 (84%), Gaps = 12/108 (11%)
Strand = Plus / Minus
Query: 22 taagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatc 81
|||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatat----- 50
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
|||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 49 -------attcattagcatcaatatgaatgtgagaaatgctagaatga 9
Score = 69.9 bits (35), Expect = 1e-11
Identities = 88/108 (81%), Gaps = 12/108 (11%)
Strand = Plus / Plus
Query: 22 taagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatc 81
|||||||||||| ||||||||||||||||||| ||| |||||||| ||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaatata------------ 52
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
| |||| |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 53 tgtctagattcattagcatcaatatgaatgtgagaaatgctagaatga 100
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 61 atgaatc 67
|||||||
Sbjct: 65 atgaatc 71
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| |||||| |||||||||||| ||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 61 atgaatc 67
|||||||
Sbjct: 78 atgaatc 72
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
| ||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| |||||||| ||| ||| ||||||||||
Sbjct: 73 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 132
Query: 149 gaagta 154
| ||||
Sbjct: 133 ggagta 138
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/154 (81%), Gaps = 14/154 (9%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||| |||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| ||||||||| |||||||| | |||||||||||||||| ||||||
Sbjct: 84 ataaatctagac--------------aaattcatgaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||||| ||| ||||||||||||||| ||||
Sbjct: 38 ctagaatggcttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 124/154 (80%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||| || | |||| ||| || | |||||||||||||||| ||||||
Sbjct: 65 atga--------------atttgtctagatttatgaacatcaatatgaatgtgggaaatg 110
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 111 ctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 61 atg 63
|||
Sbjct: 65 atg 67
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 92 cattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaa 151
||||| ||| ||||| ||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 152 gta 154
|||
Sbjct: 7 gta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt 38
|||||| |||||| |||||| |||||||||||| ||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
||||||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||| ||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 137 tgtgaaacggaggaagta 154
| ||||||||||||||||
Sbjct: 113 tatgaaacggaggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| | ||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| ||| ||| || | |||| |||||||| |||| | |||||| || | ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | || |||||| | ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||| ||| | | || |||||||| ||| ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 81 ctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtg 140
||||||| |||||||| ||||||||||||| || |||||||||||||| ||| ||||||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 141 aaacggaggaagta 154
||||||||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| || ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||| ||||
Sbjct: 65 atgaatgtaga 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||| ||| ||||||||| || |||| ||| |||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatatt 84
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||||||| || ||||||| |||| ||||| |||||||||||| ||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 61 atgaatctagacatatat 78
||||||||||| ||||||
Sbjct: 70 atgaatctagatatatat 53
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
|||| |||||| |||||||| |||||||||||||||| |||||||||| ||| ||| ||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 137 tgtgaaacggaggaagta 154
|||||||||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||| | || ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| ||| | || |||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat 110
|||||||||||||||||| | ||||||||||||| |||| ||||||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaat 49
Score = 60.0 bits (30), Expect = 9e-09
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||||||| || |||| | ||||| | | | || |||||||| ||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||| |||||| |||| | |||| |||||||| |||| |||||||| || | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||| ||| ||| || ||| |||| |||| ||||||||||| | ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| || | ||| ||| ||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| | || || |||| | ||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|| |||||| | ||||| | |||| |||||||| |||| ||||||||||| | ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | | ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | | ||||| | |||| |||||||| |||| || |||||||| | ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| | ||||| |||| | |||||||| || ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||||| ||||| ||| || |||||||| |||| ||||||||| | | ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||| || |||||||||||| ||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 72 atgaatctaaacat 59
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| || ||| |||||||| ||| ||||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 149 gaagta 154
||||||
Sbjct: 127 gaagta 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtt 59
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| ||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
||||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| || ||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || ||||||||| ||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 61 atgaatctagacatata 77
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| ||||||||| ||| ||||||||| || ||||| ||| |||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| ||||||||| || ||||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatatt 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| ||||| || ||||| ||| ||||||||||||||| ||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||||||| ||||||||| || |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 61 atgaatcta 69
|||||||||
Sbjct: 66 atgaatcta 58
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||| ||||||||| |||||||| ||| ||| ||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 120
Query: 149 gaagta 154
| ||||
Sbjct: 121 ggagta 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| ||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||| ||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 61 atgaatctagacatata 77
|||||||||||||||||
Sbjct: 79 atgaatctagacatata 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| ||| ||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 88 atatggatgagagaaatcctagaatgacttatattgtgaaacggaggaagta 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcata 51
|||| ||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 104 tatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||| |||| |||||||| ||| ||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattcta 33
|||||||||||||||||||| ||||||| ||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatcta 79
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||| ||||| ||| |||||||||||| |||| | ||||||||||| ||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 61 atgaatctagacatatatat 80
||||||||||||||||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 75 atatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaa 134
|||||| | |||| |||||||| |||| ||||||||||| | |||| |||||||| |||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 135 attgtgaaacggaggaagta 154
||| ||||| ||||||||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt 38
|||||||||||||||| ||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 71 acatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgat 130
|||| |||||||||||| |||||||| |||||||||| | |||| ||||| || |||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 131 ttaaattgtgaaacggaggaagta 154
||| ||||||||||||||||||||
Sbjct: 107 ttacattgtgaaacggaggaagta 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || ||||| |||| | |||||| ||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||| ||||| ||||||||| || ||||| |||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| |||||| |||||||||||| || |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 61 atgaatctagacatat 76
||||||||||| ||||
Sbjct: 55 atgaatctagatatat 40
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| ||||||||||||||| |||||| |||||||| ||| ||| |||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 142 aacggaggaagta 154
|||||||||||||
Sbjct: 103 aacggaggaagta 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattcta 33
|||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | || || |||| || | |||||| | ||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||| | | | ||| |||||||| |||| ||||||||||| | ||||
Sbjct: 96 atgaatctagacatatgtgtgt--ctagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| || ||| ||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||| ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| |||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 61 atgaatc 67
|||||||
Sbjct: 74 atgaatc 68
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| || ||||| ||| ||||||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 149 gaagta 154
||||||
Sbjct: 129 gaagta 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
|||||| ||||||||||||| ||||||||| | ||||| |||||||||||| ||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacgga 147
|||||||||||||||| ||||| | ||||| ||| |||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 attaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaag 152
|||| ||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 153 ta 154
||
Sbjct: 137 ta 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 61 at 62
||
Sbjct: 78 at 77
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 82 tatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtga 141
|||||| |||||||| ||||||||||||| | ||||| |||||||| ||| |||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 142 aacggaggaagta 154
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||| ||||| ||||| || ||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 74 atgaatctaga 64
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 72 catatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatt 131
||||||||| ||||| |||||||| ||| ||||||||| || ||||| ||||| || |
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 132 taaattgtgaaacggaggaagta 154
|| ||||||||||||||||||||
Sbjct: 112 tacattgtgaaacggaggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||| ||||| |||||||| ||| ||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | || || ||| ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat 110
|||||||||||||||| ||| |||||| ||||||| |||| ||||||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaat 49
Score = 73.8 bits (37), Expect = 6e-13
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| ||| | || |||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtg 113
||||| ||||| ||||| || | |||| |||||||| |||| |||||||||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 61 atgaatctag 70
||||||||||
Sbjct: 65 atgaatctag 74
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| || ||||| ||| ||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | |||| |||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||| ||| ||| |||||| | |||| |||||||| |||| ||||||||||| | ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| | | ||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| | | |||| | ||||| |||| | ||||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||||||| | | || ||||||| |||| |||||| |||| | ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 121 ttagaa 126
|||||
Sbjct: 38 ctagaa 33
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| ||||||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 149 gaagta 154
||||||
Sbjct: 109 gaagta 114
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 61 atgaat 66
||||||
Sbjct: 54 atgaat 49
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcat 50
|||||||||||||||||||| |||||||||||| |||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 105 atgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| |||| || ||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| ||| ||| || | |||| |||||||| |||| | |||||| || | ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| || | ||| ||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | || || |||| | || |||||| | ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||| ||| | | || |||||||| | || ||||| || |||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||||| |||||||||||| ||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 61 atgaatctag 70
||||||||||
Sbjct: 83 atgaatctag 74
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| || ||||| ||| ||||||||||||||
Sbjct: 78 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 137
Query: 149 gaagta 154
||||||
Sbjct: 138 gaagta 143
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| | || |||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||||| ||| ||| || |||||||| |||| ||||| | ||| | |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| ||| | ||| | ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | | ||| || | |||| |||||||| |||| | |||||| || | ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
||||||||||| |||||||| ||||||||| | |||| ||||| |||||||| ||| ||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 137 tgtgaaacggaggaagta 154
||||||||||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||| | ||||| ||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||| ||||| |||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||||| |||||||| ||| ||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | || || ||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat 110
|||||||||||||||| ||| |||||| ||||||| |||| ||||||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaat 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| ||| | || |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtg 113
||||| ||||| ||||| || | |||| |||||||| |||| |||||||||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||| ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatata 77
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||| ||||||||||| | |||| ||||| || ||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||| ||| | ||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 61 atgaa 65
|||||
Sbjct: 61 atgaa 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| ||||||||| || |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| |||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 90 ttcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagg 149
||||||| ||||| ||| |||||| |||||| |||||||| ||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 150 aagta 154
||||
Sbjct: 117 gagta 121
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaa 65
|||||
Sbjct: 65 atgaa 69
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 90 ttcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagg 149
||||||| |||||||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 150 aagta 154
|||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 61 a 61
|
Sbjct: 65 a 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 91 tcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagga 150
|||||| |||| ||||||||||| |||||| |||||||| ||| ||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 151 agta 154
||||
Sbjct: 127 agta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 61 atga 64
||||
Sbjct: 70 atga 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| ||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 100 tcaatatgaatgtgagaaatgttagaatgatttaaattgtg-aaacggaggaagta 154
|||||||||||||| |||||| |||||||| ||| |||||| ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 12 tttcacaatttaagtcattctatcatttctcacattcatatt 53
||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatatt 63
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | |||||||||| | ||||||||||| ||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 61 atgaatctagacatatatat 80
||||||||||||||||||||
Sbjct: 78 atgaatctagacatatatat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 73 atatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaa 126
|||||||| | |||| |||||||| |||| ||||||||||| | |||| |||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 110
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcat-tctatcatttctcacattcatattaatgtt 59
|||||||||||||||||||| |||||| |||| |||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 60 aatgaatctaga 71
||||||||||||
Sbjct: 65 aatgaatctaga 76
Score = 77.8 bits (39), Expect = 4e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttaga-atgatttaaa 135
||||||||||| |||||||| |||||||||||||||| ||||||||||| || ||| |
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttaca 24
Query: 136 ttgtgaaacggaggaagta 154
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| || |||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 85
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||||| || ||||||||| ||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 61 atgaatctagac 72
||||||||||||
Sbjct: 76 atgaatctagac 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||| |||||||| |||||| | ||| ||||||||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| ||||||||||||| || ||||| |||||||| ||| ||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 126 cggagggagta 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| ||||| |||||| |||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatatt 57
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||| ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 61 atgaatctaga 71
|| ||| ||||
Sbjct: 65 ataaatttaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
|||| |||||||||| |||| |||||||| |||||| ||||| |||||||| ||| ||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacat 23
Query: 137 tgtgaaacggaggaagta 154
||||||||||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||| ||| |||||||||||| ||||| |||||||||| | ||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 61 atgaatctagacatatatat 80
|| |||||||| ||||||||
Sbjct: 84 ataaatctagatatatatat 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||||||||||| ||||| ||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 61 at 62
||
Sbjct: 65 at 66
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||||| ||| || |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| |||||||| ||| || |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 61 atgaatct 68
||||||||
Sbjct: 75 atgaatct 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||| |||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggag 129
Query: 149 gaagta 154
||||||
Sbjct: 130 gaagta 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| |||||| |||||| ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 61 atgaatctaga 71
|| ||| ||||
Sbjct: 65 ataaatttaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
|||| |||||||||| |||| |||||||| |||||| |||||| |||||||| ||| ||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacat 23
Query: 137 tgtgaaacggaggaagta 154
||||||||||||| ||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 91 tcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagga 150
|||||| |||||||||||||||| ||||| || ||||| ||| |||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||| | ||| || ||||| |||||||||||| ||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| ||||| || ||| | ||| ||||||||||||||| ||||
Sbjct: 72 catcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 61 atgaatctagacatatatat 80
||||||||||||||||||||
Sbjct: 72 atgaatctagacatatatat 53
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| ||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||| | ||| |||||||||||| ||||| ||||||| ||| ||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 61 atgaatctagacatata 77
||||||||||||||||
Sbjct: 78 gtgaatctagacatata 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| ||||| || |||| ||| ||||||| |||||||||||||| ||| ||| | |||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 128 cggagggagta 138
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatc 101
||||||||||| |||| ||||||||||||||||||||| | |||| |||||||| ||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 102 aatatgaatgtg 113
|||||||||||
Sbjct: 33 tatatgaatgtg 22
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatc 101
||||||||||| ||||||||||||||||||| |||||| | |||| ||||||| ||||
Sbjct: 22 cacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatc 81
Query: 102 aatatgaatgtg 113
|||||||||||
Sbjct: 82 tatatgaatgtg 93
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaatc 67
||||||||||||| ||||||||| || ||||| ||| ||| | |||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 68 tagacatatat 78
|||||| ||||
Sbjct: 72 tagacagatat 82
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 5 ccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||| ||||||||| || ||||| ||||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagg 149
|||||||||||| |||||||| ||||| ||| |||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 77 atatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaat 136
|||||| |||| |||||||| ||| ||| | ||| ||| ||||| || ||||| ||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 137 tgtgaaacggaggaagta 154
||||||||||| ||||||
Sbjct: 22 tgtgaaacggaagaagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 88 aattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacgga 147
||||||||| ||||||||||||| || ||||| |||||||| ||| |||||||||||||
Sbjct: 71 aattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Query: 148 ggaagta 154
|||||||
Sbjct: 11 ggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| || ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
||||| |||||||||| ||| |||||||||||| ||||| || ||||||||| ||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
||||||||||||| || ||||| |||||||| ||| ||| ||||||||||
Sbjct: 73 catcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 6 cctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaa 65
||||||||||||||| ||||||||| || ||||| | ||||||||| ||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 66 tctagacatatatat 80
|||||||||||||||
Sbjct: 67 tctagacatatatat 53
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 75 atatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaa 134
|||||| | |||| |||||||| ||||||||||||| | ||||| || ||||| |||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 135 attgtgaaacggaggaagt 153
|||||||||||||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 gtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||| |||||||||||| |||||| | |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 88 aattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacgga 147
||||||||| ||||||||| || |||| ||||| |||||||| ||| |||||||||||||
Sbjct: 65 aattcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
Query: 148 ggaagta 154
|||||||
Sbjct: 125 ggaagta 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||| || ||||| ||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 61 atgaat 66
||||||
Sbjct: 71 atgaat 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||||||||||||||||||| ||||||||| || |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||| || |||||| || ||||||||| ||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 61 atgaatctagacatatata 79
|| ||||||||||| ||||
Sbjct: 76 ataaatctagacatttata 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| ||| |||| ||||||||||||| || |||||| || ||||| || |||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 126 cggaggaagta 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattca 49
|||| ||||||||||||||| ||||| |||||| ||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 106 tgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||||| |||||| | ||| ||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 100 tcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc-cacattcatatt 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| ||||||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| ||| || || | |||| |||||||| |||| | |||||||| | |||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||| || | ||| ||||| ||||||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 55 atgttaatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtga 114
|||||||||||| ||||||||| || | | || |||||||| |||| ||||| ||||||
Sbjct: 59 atgttaatgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtga 118
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
| |||| ||||| | ||| ||||||||||||||||||||
Sbjct: 119 gcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||| |||||| |||||||| ||| ||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 149 gaagta 154
||||||
Sbjct: 121 gaagta 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||| || |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 61 atgaat 66
||||||
Sbjct: 66 atgaat 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||||||||| |||||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||| ||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||||||||||| ||||| |||||| |||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 61 atgaat 66
||||||
Sbjct: 64 atgaat 69
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||| |||||| ||||| |||||||| ||| ||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 149 gaagta 154
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 5 ccctccgtttcacaatttaagtcattctatcatttctcacattcat 50
|||||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt-tcacattcat 64
Score = 50.1 bits (25), Expect = 9e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 105 atgaatgtgagaaatgttagaatgatttaaattgtgaaacggagg 149
|||||||||| ||||| |||||||| ||| |||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacggagg 107
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| | ||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||||||| | ||| ||| || |||||||| |||| ||||| || || ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| || || ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| | ||||| | | |||| |||||||| || | | ||||||||| | ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatta 54
|||| ||||||||||||||| |||||||||||| |||||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatta 66
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacgga 147
||||||||||||| || |||||| |||||||| ||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
||||||||||||| |||||||||||| |||||| || |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatatt 57
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 97/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt-tctcacattcatattaatgtt 59
|||| ||||||||||| ||| |||| | ||||| |||| ||| |||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgtt 63
Query: 60 aatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtg 113
||||||||||||||||||| | | | || |||||||| |||| |||||||||||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtg 117
Score = 69.9 bits (35), Expect = 1e-11
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| || ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgaga-aat 119
||||||||| ||| | |||| | |||| |||||||| |||| |||||||||| ||| |||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgt-agacaat 40
Query: 120 gttagaatgatttaaattgtgaaacggaggaagta 154
| ||||| | ||| ||| ||||||||||||||||
Sbjct: 39 gctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 64 atgaatctaaacat 77
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||| || ||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 75 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtt 59
|||| ||||||||||||||| |||||||||||| ||||| || ||||||||| |||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| ||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcat 50
|||||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 105 atgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||||| || ||||| || |||||| |||| |
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacgagg 108
Query: 149 gaagta 154
||||||
Sbjct: 109 gaagta 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 10 cgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaat 66
|||| |||||| |||||||| || |||||| |||||||||||| ||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatg 63
||||||||||||||||| |||||||||||| ||||||||| || ||||| || ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 64 aatcta 69
||||||
Sbjct: 68 aatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||||||| ||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 81 catcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || ||||| |||||||||| || ||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||| || ||||||||| |||||||| ||| ||||||||||||||
Sbjct: 70 attcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 149 g 149
|
Sbjct: 10 g 10
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||||||| |||||| ||||||||| || |||||| || ||| ||||| ||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
|||| ||||||||||||||| |||| ||||||| |||||| |||||||||||| ||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| ||||||||||||||||| |||||||| | |||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaa 126
|||||||| |||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaa 126
|||||||| ||| ||||||||||| | |||| |||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||||||| || ||||||||| ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 61 a 61
|
Sbjct: 65 a 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || ||||||||| ||| ||||| ||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 61 a 61
|
Sbjct: 62 a 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 66 catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||| ||||||||| || ||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||| |||||| ||||| |||| | ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 61 atgaatcta 69
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 76 tatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaa 135
||||||||| || |||||||| ||||||||| | |||| ||||| |||||| | ||| |
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 136 ttgtgaaacggaggaagta 154
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcat 29
|||||||||||||||||||| ||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| |||||||||||| |||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| ||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 110 tgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcaca 45
|||||||||||||| ||||| ||| |||||||| |||||| ||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctagacatatatatct 82
||||||||||| |||||| |||||||||||| ||||||||| ||||||| | ||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 83 a 83
|
Sbjct: 63 a 63
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 75 atatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatga 129
||||||||||||| || ||||| |||||||||||||||| |||||| ||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatctaga 71
||||||||||| |||||| |||||||||||| ||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||| | ||||| ||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 61 atgaatcta 69
|| ||||||
Sbjct: 79 ataaatcta 71
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 78 tatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaatt 137
||||||| || ||| |||| ||||||||| | |||| ||||| |||||||| ||| |||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 138 gtgaaacggaggaagta 154
|||||||||||| ||||
Sbjct: 123 gtgaaacggagggagta 139
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||| ||||||||||||| |||||||| ||| ||||| ||||||||||||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||| ||||| |||||||||||| ||||||||||||| ||||| |||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 61 atga 64
||||
Sbjct: 33 atga 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcatt 30
||||| |||||||||||||| |||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 6e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 61 atgaatc--tagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaa 118
||||||| || ||| | |||| ||| || |||||||| |||| ||||||||||| | ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 119 tgttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| | ||| | | ||||||||||||||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatatat 78
||||||||| | ||||||
Sbjct: 65 atgaatctatatatatat 82
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||| |||||||||||| ||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 61 atgaatcta 69
|||||||||
Sbjct: 70 atgaatcta 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||||||||||||||| |||| || ||||| ||| ||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 149 gaagta 154
||||||
Sbjct: 125 gaagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcatt 30
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| ||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 61 atgaatctagacatatatat 80
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 75 atatatctatctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaa 134
|||||| | |||| |||||||| |||| | ||||||||| |||| ||||| | |||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 135 attgtgaaacggaggaagta 154
||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 71.9 bits (36), Expect = 2e-12
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat-ta-atgt 58
|||||||||||||||||||| |||| | || || |||| ||||||| ||||| || ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 59 taatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaa 118
||||||||||| ||| ||| || | | || |||||||| |||| | ||||||||| | ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 119 tgttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| | ||| |||||||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||||||| |||| | ||||| |||| | ||||||||| | ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattacc--atcaatatgaatgtgagaaa 118
||||||||| |||||| ||| | | || |||||||| | || ||||| ||||||| ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 119 tgttagaatgatttaaattgtgaaacggaggaagta 154
|| || || | ||| ||||||||||||||| ||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | ||||| ||||| ||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 61 atgaatctagacatat 76
||||||||| ||||||
Sbjct: 76 atgaatctaaacatat 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||| ||||| ||||| | |||| ||||| | ||| ||||||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 149 gaagta 154
| ||||
Sbjct: 131 ggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | ||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 61 atgaatctagacatat 76
||||||||| ||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||| ||||| ||||| | |||| ||||| | ||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 149 gaagta 154
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| ||||| |||||| |||||| |||||||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 111 gtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcac 44
|||| ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||| |||||||| |||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 61 atgaatctagacatat 76
|| |||||||||||||
Sbjct: 74 ataaatctagacatat 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| ||| |||| |||| ||||||||||| | |||| ||||| | ||| |||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 124 cggaggaagta 134
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 55 atgttaatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtga 114
|||||||||||||||||||||||||| | | || |||||||| |||| | |||||||||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgg 45
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
| |||| ||||| | || ||| ||||||||||||||||
Sbjct: 44 gtaatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| ||| | ||||| |||| | ||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatc 101
||||||||| ||| |||||| | |||| |||||||| ||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatc 105
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||||||| |||||||||||| |||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacatt 47
|||||||||||||||||||| |||||||||||| |||||| ||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 9 ccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||| |||||||||||| |||||| |||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 108 aatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacgg 146
|||| |||||| |||||| |||||||| ||| ||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| ||||| |||||| |||| ||||||||||| ||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 61 atgaatctagacata 75
|| ||||||||||||
Sbjct: 77 ataaatctagacata 63
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 69.9 bits (35), Expect = 1e-11
Identities = 76/90 (84%), Gaps = 6/90 (6%)
Strand = Plus / Plus
Query: 31 ctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaaat 90
|||||||||| |||||||||||| |||| ||||||||||||| |||| |||| ||
Sbjct: 1 ctatcatttcccacattcatattgatgtcaatgaatctagac------atctgtctagat 54
Query: 91 tcattaccatcaatatgaatgtgagaaatg 120
||||| |||||||||||||||| ||||||
Sbjct: 55 tcattgacatcaatatgaatgtgggaaatg 84
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 35 catttctcacattcatattaatgttaatgaatctagaca 73
|||||| |||||||||||| |||| ||||||||||||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagaca 46
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| |||| | ||||| |||| ||||||||||| |||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaat 110
||||||||||||| ||| || ||| |||||||| |||||||||||||
Sbjct: 96 atgaatctagacacgcata--tacctagattcattaacatcaatatgaat 49
Score = 61.9 bits (31), Expect = 2e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | | ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| ||||| | |||| |||||||| ||| ||||||||||| ||||
Sbjct: 65 atgaatctag--gtatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| ||||||||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 104 tatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||| |||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcata 51
|||| ||||||||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttct 41
||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttct 45
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 1e-11
Identities = 105/127 (82%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 61 a-tgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaat 119
| | |||||||||| || || |||||| |||||||| |||| ||||||||||| | |||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 120 gttagaa 126
| |||||
Sbjct: 125 gctagaa 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 61 atgaatctagacatat 76
||||||||||| ||||
Sbjct: 99 atgaatctagatatat 84
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| | ||||| ||| | ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatg 111
|| |||||||||||||| || | | || |||||||| |||| | |||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
Score = 56.0 bits (28), Expect = 1e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 55 atgttaatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtga 114
||||||||||||||| |||||| ||| | |||| ||| |||| |||| | ||| |||||
Sbjct: 59 atgttaatgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgg 118
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
| |||| ||||| | ||| ||||||||||||||| ||||
Sbjct: 119 gcaatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacat 46
|||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 109 atgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||||||| ||||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt 38
|||||||||||||||||||| ||| |||||||| ||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
|||||||||||||||||||| ||||||||| || |||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||||| |||| || ||||| ||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||| ||||| ||| |||||||||||| |||| |||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatatt 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 100 tcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| |||| |||||||| ||| ||| ||||| ||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
|||||||||| || | |||| | |||| |||||||| ||| |||| |||||| | || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| |||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 59 taatgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaa 118
|||||||||||||||||||| | | ||| |||||||| ||| ||||||||||| | ||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 119 tgttagaatgatttaaattgtgaaacggaggaagta 154
|| ||||| | ||| ||| ||||||||||| ||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgt 58
|||||||||||||||| ||| ||||||||| || |||||| |||||||||||| ||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||| |||||| ||| |||||||||||| ||||| |||||||||| | ||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||| |||||| || ||||| ||| ||| ||||||||||| ||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatcta 83
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 cacattcatatatatgttaatgaatctagacatatatatcta 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatcta 83
||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 79 cacattcatatatatgttaatgaatctagatatatatgtcta 38
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| ||||| |||||| ||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatatt 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| ||||| |||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| ||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| ||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
||||||||| |||||||||| |||||||||||| || ||| ||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatatt 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| ||| ||||||||| || || || |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 91 tcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggagga 150
|||||| |||||||||||||||| || || || ||||| ||| ||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| ||| || |||||||| ||| |||||||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||| ||||||||||||||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||||||||| || ||| | ||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatta 54
|||| ||||||||||||||| ||||| ||| || ||||| |||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatta 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| ||||| || ||| | ||| ||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| |||||||||||| |||||| ||| || |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatatt 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 100 tcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||| || ||| |||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 tccgtttcacaatttaagtcattctatcatt 38
||||||||||||| |||||||||||| ||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||| ||| ||||||||||||| ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagaca 73
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
||||||||||||| |||| ||||||||||| | |||| ||||| | ||| ||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||| ||| |||| | ||||| |||| | |||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 91
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| ||||| |||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatatt 53
|||||||||||||||||||| ||||| |||||| ||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| ||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||||||| ||||| |||||| | ||| ||||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| | | |||| | ||||| |||| | ||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaa 109
|||||||||||||||||||| | | || ||||||| |||| |||||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 89/109 (81%)
Strand = Plus / Minus
Query: 46 ttcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatcaata 105
||||||| |||| |||||||||| ||| |||||| | |||| ||||||| ||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 106 tgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| | |||||||||| | ||| | | ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| | ||||| |||| ||||||||||| ||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 61 atgaatctagaca 73
|| ||||||||||
Sbjct: 80 ataaatctagaca 68
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatc 101
||||||||||| |||||||||||||||||||| ||| | | ||| |||||||| ||||
Sbjct: 22 cacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacatc 81
Query: 102 aatatgaatgtgagaaatgttagaa 126
||||||||||| | |||| |||||
Sbjct: 82 tatatgaatgtgggcaatgctagaa 106
Score = 50.1 bits (25), Expect = 9e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| |||||||||||||||| || | ||| | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 89 attcattaccatcaatatgaatgtg 113
|||||||| ||| |||||||||||
Sbjct: 46 attcattaacatatatatgaatgtg 22
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | ||||| |||| |||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | ||||| ||||| ||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 61 atgaatctag 70
||||||||||
Sbjct: 87 atgaatctag 78
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 86 taaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacg 145
|||||| |||| |||||||||||||||| |||| || ||||| ||| |||||||||||
Sbjct: 73 taaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacg 14
Query: 146 gaggaagta 154
|||||||||
Sbjct: 13 gaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||| || |||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 61 atgaatctagacata 75
|| ||| || |||||
Sbjct: 65 ataaatttatacata 79
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcatt 30
|||||||||||||||||||| |||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 61 atgaatcta 69
|||||||||
Sbjct: 80 atgaatcta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggag 148
|||||||| |||| ||||||||||| | |||| ||||| | ||| ||| ||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 149 gaagta 154
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||||||||||||||||| ||| ||| ||||||| ||||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacat 46
|||||||||||||||| ||| |||||||||||| |||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||| ||||||| ||| |||||||||||| ||||||||||||| |||| | |||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 61 atgaatctagacatata 77
|||||||||| |||||
Sbjct: 65 gtgaatctagatatata 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 109 atgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||| |||||||| ||| ||| ||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||| ||| ||| |||||||| |||| | ||||| ||||| ||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 61 atgaatctagac 72
||||||||||||
Sbjct: 72 atgaatctagac 61
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||| ||||| ||||| | |||| |||||||||||| ||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 144 cggaggaagta 154
| |||| ||||
Sbjct: 122 cagagggagta 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt 38
|||| ||||||||||| ||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||| ||| ||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||| ||| |||| | ||||| |||| ||||||||||| ||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 61 atgaatctagacatatatat 80
|||||||||||||| |||||
Sbjct: 72 atgaatctagacatctatat 53
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 6e-10
Identities = 73/86 (84%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 35 catttctcacattcatattaatgttaatgaatctagacatatatatctatctaaattcat 94
|||||| ||| |||||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcat 31
Query: 95 taccatcaatatgaatgtgagaaatg 120
|| ||||||||||| ||| ||||||
Sbjct: 30 taatatcaatatgaacgtgggaaatg 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 72/86 (83%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 35 catttctcacattcatattaatgttaatgaatctagacatatatatctatctaaattcat 94
|||||| ||| |||||||| || |||||||||||||| | ||||| ||||| ||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagatata---atctagattcat 61
Query: 95 taccatcaatatgaatgtgagaaatg 120
|| ||||||||||| ||| ||||||
Sbjct: 62 taatatcaatatgaacgtgggaaatg 87
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||| |||||| ||| |||||| ||||| |||| |||| |||||||| ||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| | || |||||||| ||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 80 atgaatctaga 70
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||||||||||||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 116 aaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaa 55
|||| ||||||||||||||| ||||||||| || ||||| ||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatattaa 55
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 aatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||||||| ||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcatt 30
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctat 34
|||||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctat 38
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 99 atcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||||||| |||| |||||||| || ||||||||||||||||||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| ||||||||||| |||| ||||||| ||||| || |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 61 at 62
||
Sbjct: 48 at 47
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 35 catttctcacattcatattaatgttaatgaatctagacatatatat 80
|||||| |||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 35 catttctcacattcatattaatgttaatgaatctagacatatatat 80
|||||| |||||||||||| ||| |||| |||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 90 ttcattaccatcaatatgaatgtgagaaatgttag 124
||||||| |||||||||||||||| ||||||||||
Sbjct: 35 ttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 67 ctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatgttag 124
|||||||||||||| | ||| ||| |||| |||||||||||||||| ||||||||||
Sbjct: 61 ctagacatatatatgt--ctagatttattagcatcaatatgaatgtgggaaatgttag 116
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| | ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 60.0 bits (30), Expect = 9e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| ||| |||||||||||| || | |||| | ||||
Sbjct: 12 ttctagcattgcccacattcatatctatgctaatgaatctaggcacacatatatgtctag 71
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaa 126
||||||| |||| ||||||||||| | ||||||||||
Sbjct: 72 attcatttgcatctatatgaatgtgggcaatgttagaa 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| ||| ||||||||||||||||||| | | |||
Sbjct: 109 ttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtgtgcctag 50
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaa 126
|||||||| ||| ||||||||||| | |||| |||||
Sbjct: 49 attcattagcatagatatgaatgtgggcaatgctagaa 12
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcat 50
|||||||||||||||||||| ||||||||| || |||||| | |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 116 aaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||| ||||||||||||||| |||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattt 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 105 atgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||| | |||||| || ||||| ||| ||||||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| | ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 68 atgaatctagacat 55
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
||||||||| |||||| ||| |||| | || || |||| | ||||||||||| || | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||| |||||||| | | |||| |||||||| ||| ||||||||||| | || |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
||||| | ||| ||| |||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| |||| |||||| ||| |||| | ||||| | || | ||||||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||||||||||| ||| | || || ||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 61 atgaatctagacatatat 78
|||||||||||| |||||
Sbjct: 65 atgaatctagacttatat 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 117 aatgttagaatgatttaaattgtgaaacggaggaagta 154
|||| |||||||| ||| ||| ||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatt 38
|||| ||||||||||| ||| |||||||||||| ||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 45 attcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatcaat 104
|||||||| |||||||||||||||| |||| |||| | ||| |||||||| |||| ||
Sbjct: 25 attcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctat 84
Query: 105 atgaatgtgagaaatgttagaa 126
||||||||| | |||| |||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatat 78
||||| |||| | ||||||||||| |||||||||||||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||| | | |||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 66 atgaatctagacat 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
|||| |||||||| |||| ||||||||||| | |||| ||||| | ||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 144 cggaggaagta 154
|||||||||||
Sbjct: 116 cggaggaagta 126
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 86 taaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacg 145
||||||||||| |||| ||||| || |||| |||| || |||| ||| |||||||||||
Sbjct: 69 taaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacg 128
Query: 146 gaggaagta 154
|||||||||
Sbjct: 129 gaggaagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| |||| || |||| |||| || ||||| ||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 61 atgaat 66
||||||
Sbjct: 77 atgaat 72
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 98 catcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||| ||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 48 catcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||||||||||||||||||| ||| |||||||| |||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacat 46
|||||||| ||||||||||| |||||||||||| |||| ||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattcta 33
|||||||||||||||||||| ||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattcta 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacat 46
|||| |||||||| |||||| |||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 109 atgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||| |||||| |||||||| ||| |||||| |||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 86 taaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaacg 145
||||||||||| |||| ||||| || |||| |||| || |||| ||| |||||||||||
Sbjct: 73 taaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacg 14
Query: 146 gaggaagta 154
|||||||||
Sbjct: 13 gaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| |||| || |||| |||| || ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 23 aagtcattctatcatttctcacattcatattaatgttaatgaatc 67
||||||||||| |||||| |||||||||||| ||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatga 129
|||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 44 attcattagcatcaatatgaatgtgggaaatgctagaatga 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 89 attcattaccatcaatatgaatgtgagaaatgttagaatga 129
|||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 47 attcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 26 tcattctatcatttctcacattcatattaatgttaatgaatc 67
|||||||| |||||| |||||||||||| ||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 42 cacattcatattaatgttaatgaatctagacatatatatctatctaaattcattaccatc 101
||||||||||| |||||||| ||||||||||||||||| | | | |||||||| |||
Sbjct: 46 cacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaacata 105
Query: 102 aatatgaatgtgagaaatgttagaa 126
||||||||||| | |||| |||||
Sbjct: 106 tatatgaatgtgggcaatgctagaa 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatatatatctatctaa 88
||||| |||| | ||||||||||| |||||||||||||| | || |||||| | ||||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 89 attcattaccatcaatatgaatgtg 113
||| |||| ||| |||||||||||
Sbjct: 70 atttattaacatatatatgaatgtg 46
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 86/104 (82%), Gaps = 6/104 (5%)
Strand = Plus / Minus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatat--atatc----t 82
||||| |||| | ||||||||||| ||||||||||||||||||| || ||||| |
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatccatat 49
Query: 83 atctaaattcattaccatcaatatgaatgtgagaaatgttagaa 126
||||| |||||||| |||| ||||||||||| | |||| |||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 29 ttctatcatttctcacattcatattaatgttaatgaatctagacatat 76
||||| |||| | ||||||||||| ||||||||||||||||| ||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatat 52
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttc 40
|||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacatt 47
|||||| ||||||||| ||| ||||||||| || |||||||||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||| ||||||||||||||| |||| | || || | || | ||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 61 atgaatctagacatat 76
||||||||||||||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||| ||||||||| ||| ||||| || ||||| ||| ||| ||||| || ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 46 atgaatctaga 36
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcatt 30
|||| ||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 125 aatgatttaaattgtgaaacggaggaagta 154
||||| ||| ||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
||||||||||||| |||| ||||||||||| | |||| || || | |||| ||| |||||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 144 cggaggaagta 154
|||||| ||||
Sbjct: 132 cggagggagta 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| ||| | || || |||| | ||||||||||| ||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 61 atgaatctagaca 73
|||||| ||||||
Sbjct: 82 atgaatttagaca 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatat 52
|||||||||||||||| ||| |||| | ||||| |||| | |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaatgatttaaattgtgaaa 143
||||||||||||| ||| ||||||||||| | |||| ||||| | ||| |||||||||
Sbjct: 56 tctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 115
Query: 144 cggaggaagta 154
|||| ||||||
Sbjct: 116 cggatgaagta 126
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 8 tccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatgaatc 67
||||||||||||| |||| | ||||| |||| | ||||||||||| || ||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 68 tagacata 75
||||||||
Sbjct: 59 tagacata 52
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||||||| |||| ||||| |||| | ||||| | || ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 61 atgaatctagacatatatatcta 83
||||||||| ||||||| |||||
Sbjct: 65 atgaatctaaacatatacatcta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 105 atgaatgtgagaaatgttagaatgatttaaattgtgaaacggaggaagta 154
||||||||||| |||| ||||| | ||| |||||| |||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcat 50
|||| |||||||| |||||| |||| | ||||| |||| |||||||||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactcacattcat 89
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcattt 39
|||||||||||||||| ||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttct 41
|||||||| ||||||| ||| |||||||||||| |||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttct 106
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgtta 60
|||||||||||||||| ||| |||| | ||||| |||| ||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 61 atgaatctagacatatatatctatctaaattcattaccatcaatatgaatgtgagaaatg 120
||||||||||| | ||| || |||||| |||||||| ||| | || |||||| ||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 121 ttagaatgatttaaattgtgaaacggaggaagta 154
|| || | ||| ||||||||||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 7 ctccgtttcacaatttaagtcattctatcatttc 40
|||||||||||||| |||||||||||| ||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttc 50
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatttaagtcattcta 33
|||| ||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattcta 37
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 122 tagaatgatttaaattgtgaaacggaggaagta 154
|||||||| ||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 115 gaaatgttagaatgatttaaattgtgaaacggaggaagta 154
|||||| |||||||| ||| |||||||||||||| |||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggagtaagta 89
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatttaagtcattctatcatttctcacattcatattaatgttaatg 63
||||||||||||| ||| |||| | ||||| |||| ||||||||||| ||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 64 aatctagaca 73
||||||||||
Sbjct: 45 aatctagaca 36
