miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 66 tgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
|||||||||||| |||| |||||||| || | |||| |||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 144 ggagg 148
|||||
Sbjct: 14 ggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| ||||||||| || ||||||||| ||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatga 95
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| ||||||||| || |||||||||||| ||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgt 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 115 bits (58), Expect = 2e-25
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
|||||||| |||||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 137 bits (69), Expect = 5e-32
Identities = 128/152 (84%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 66 tga------atctagatatatgtctagattcattagcatcaatatgaatgtaggaaatgc 119
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||| |||||||||||||||||||
Sbjct: 120 tagaatgacttatattgtgaaacggagggagt 151
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 131 bits (66), Expect = 3e-30
Identities = 127/152 (83%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| |||||||||||||||| ||||||
Sbjct: 66 tgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatgc 116
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 117 tagaatgacttacattgtgaaacggagggagt 148
Score = 121 bits (61), Expect = 3e-27
Identities = 120/144 (83%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 85
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 84 tctagaat---------gtctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 129 bits (65), Expect = 1e-29
Identities = 127/152 (83%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| || ||||||||||| |||||||||||||||| ||||||
Sbjct: 66 tgaatctagcacatacatat-gtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagt 156
Score = 115 bits (58), Expect = 2e-25
Identities = 119/144 (82%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
| |||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 92 tctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||| | || |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 66 tgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|| |||||||||||||||||||||||||||||
Sbjct: 126 taaaatgacttacattgtgaaacggagggagt 157
Score = 107 bits (54), Expect = 4e-23
Identities = 117/144 (81%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| || | |||||||||| |||||| ||||
Sbjct: 93 tctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 157 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 98
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| || ||||||||||| ||||||||||||| || |||||
Sbjct: 97 tgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 123 bits (62), Expect = 7e-28
Identities = 119/144 (82%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 70 tctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 157 acttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaa 98
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| |||||||||||||||| ||||||
Sbjct: 97 tgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 123 bits (62), Expect = 7e-28
Identities = 119/144 (82%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
||||| |||||||| |||||||||||||||| ||||| |||||
Sbjct: 70 tctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattaga 129
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 123 bits (62), Expect = 7e-28
Identities = 126/152 (82%), Gaps = 18/152 (11%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 139 acttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaa 80
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| ||||||||||||| || ||||||
Sbjct: 79 tgaa------------------tctagattcattaacatcaatatgaatatgggaaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 118/144 (81%), Gaps = 18/144 (12%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
||||||||||||| ||||||||||||| || |||||| ||||
Sbjct: 70 ------------------tctagattcattaacatcaatatgaatatgggaaatgctaga 111
Query: 125 atgacttacattgtgaaacggagg 148
|||||||||||| |||||||||||
Sbjct: 112 atgacttacattatgaaacggagg 135
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||
Sbjct: 157 acttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaa 98
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| |||||||||||||||| | ||||
Sbjct: 97 tgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|| |||||||||||||||||||||||||||||
Sbjct: 37 tataatgacttacattgtgaaacggagggagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/144 (79%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
||||||||||||| ||| |||||||||||| |||||| || |
Sbjct: 70 tctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaa 129
Query: 125 atgacttacattgtgaaacggagg 148
|||||||| |||||||||||||||
Sbjct: 130 atgacttatattgtgaaacggagg 153
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 143 cggagggagt 152
||||||||||
Sbjct: 126 cggagggagt 135
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||
Sbjct: 131 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 73
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 7e-28
Identities = 126/152 (82%), Gaps = 16/152 (10%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 141 acttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaa 82
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
|| ||||||||||||| ||||||||||||||||||||||
Sbjct: 81 tggata----------------tctagattcattaatatcaatatgaatgtgagaaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 86 catcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 137
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 117 bits (59), Expect = 5e-26
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 144 ggagg 148
|||||
Sbjct: 14 ggagg 10
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 87 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 95
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 117 bits (59), Expect = 5e-26
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaa 83
Query: 61 tga 63
|||
Sbjct: 82 tga 80
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 144 ggagg 148
|||||
Sbjct: 134 ggagg 138
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 76 gtctagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 88 tctagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatga 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 143 cggagggagt 152
||||||||||
Sbjct: 136 cggagggagt 145
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| ||||||||||||||| ||||||
Sbjct: 66 tgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||||||| |||||||||||
Sbjct: 126 tagaatgacttacattgtgatacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/144 (79%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||
Sbjct: 153 cctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| ||||||||| |||||| |||||| | |
Sbjct: 93 tctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaa 34
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 87 gattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 146
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 147 gggagt 152
||||||
Sbjct: 11 gggagt 6
Score = 111 bits (56), Expect = 3e-24
Identities = 121/148 (81%), Gaps = 20/148 (13%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
| |||||||||||||||||||||||||| |||||| ||||
Sbjct: 70 --------------------tcgattcattagcatcaatatgaatgtgggaaatgctaga 109
Query: 125 atgacttacattgtgaaacggagggagt 152
|||||||||||| |||||||||||||||
Sbjct: 110 atgacttacattatgaaacggagggagt 137
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||| |||| | ||||||||| ||| |||| |||||||||||||||||||||
Sbjct: 6 acttcctccgttccacagtataagtcattctagtattttccatattcatattgatgctaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 66 tgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatgt 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||| |||||| ||||||||||||
Sbjct: 126 tagaatgacttatattgtggaacggagggagt 157
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||| |||||| ||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 153 cctccgttccacaatataagtcattctaacatttctcatattcatattgatgctaatga 95
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||||||||||||||||| || |||| |||||||||||| | |||| ||
Sbjct: 75 tctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatactgtggaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
|||| |||||
Sbjct: 15 cggaaggagt 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 115/146 (78%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgannn 66
||||||||||||||||||||||| || |||||| || ||||||||||||| ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 67 nnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttagaat 126
|||||||||||||| ||||| |||||| | ||||| ||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 127 gacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||| |||||| ||||||| ||| |||||||| ||||||||
Sbjct: 6 acttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 66 tgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/144 (79%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
| ||||||||||||||||| ||||||||||| |||| ||||
Sbjct: 93 tctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
||||| ||||||||||||||||||
Sbjct: 33 atgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 143 cggagggagt 152
||||||||||
Sbjct: 125 cggagggagt 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||| ||||||||| |||||||| ||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagcattttccacattcatattgatg 61
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| || ||||||||| ||||||||||||| ||||||
Sbjct: 130 cctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatga 72
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||| |||||||| |||||||||||||| | | |||
Sbjct: 66 tgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| ||| |||||||||||| ||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| || |||||||||||| |||||| || |||||||||||||||||||
Sbjct: 75 tctagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||| ||| || |||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| || ||||||||||||| |||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatac 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 126 tagaatgacttacattgtgaaacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 87 gtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 146
Query: 142 acggaggga 150
|||||||||
Sbjct: 147 acggaggga 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 99 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 150
||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 144 ggagggagt 152
|||||||||
Sbjct: 122 ggagggagt 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 150
|||||||| ||||||||| |||||||||||| |||||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 126 cctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||| ||||||||| || |||||| || ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 111 bits (56), Expect = 3e-24
Identities = 124/152 (81%), Gaps = 17/152 (11%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| | ||||||||| |||||||||||||||||||||||
Sbjct: 66 tgaatca-----------------ttgattcattaacatcaatatgaatgtgagaaatgc 108
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||| |||||||||||||||||||||||
Sbjct: 109 tagaatgaattacattgtgaaacggagggagt 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 87 gattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 146
||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 147 gg 148
||
Sbjct: 11 gg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||| ||||| ||||||||| || ||||||||||||| ||||||
Sbjct: 136 cctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatga 78
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 143 cgga 146
||||
Sbjct: 15 cgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| |||
Sbjct: 6 acttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||| ||| || ||||| ||||||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 145 gagggagt 152
||||||||
Sbjct: 138 gagggagt 145
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 143 cgga 146
||||
Sbjct: 15 cgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| |||
Sbjct: 6 acttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||| ||| || ||||| || |||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 145 gagggagt 152
||||||||
Sbjct: 138 gagggagt 145
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 145 gagggagt 152
||| ||||
Sbjct: 13 gagagagt 6
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 6 ctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 60/70 (85%), Gaps = 7/70 (10%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||| |||| ||||||||||||||||||||||
Sbjct: 80 tctagattcattaacatcaatatgaa-------aatgctagaatgacttacattgtgaaa 132
Query: 143 cggagggagt 152
||||| ||||
Sbjct: 133 cggagagagt 142
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 68 gtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 127
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 128 acggagggagt 138
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatga 76
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcat 49
||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| || |||||| |||||||||||||||| |||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||
Sbjct: 76 gtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 86 agattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 145
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 146 agg 148
|||
Sbjct: 128 agg 130
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| ||||||||| || |||||||||||||||||
Sbjct: 134 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaa 75
Query: 61 tga 63
|||
Sbjct: 74 tga 72
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| ||||||| |||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 10 cctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 128 acttacattgtgaaacggagggagt 152
|||||||||||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagt 106
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 86 gtctagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaa 145
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 146 acggagggagt 156
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| || |||| ||| ||||||||||||| ||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatga 94
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||| |||| | ||||| ||||||||||| |||
Sbjct: 74 tctagattcattaatatcaatatgaatgtgggaaaact-agaataacttacattgtaaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||||||| ||||||||
Sbjct: 139 acttcctccgtttcacaatgtaagtcattctagcattt 102
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||| |||| ||||| ||||||||||||||||||||||||||||
Sbjct: 84 catcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggagg 135
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatga 68
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcat 49
||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 138 acttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| || |||||| |||||||||||||||| |||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggagg 134
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 91 gtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaa 150
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 151 acggagggagt 161
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatga 99
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatga 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcata 50
||||||||||||| ||||||||||||||| |||||||||||| |||||||
Sbjct: 144 acttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 103 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggagg 140
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 133 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaa 74
Query: 61 tga 63
|||
Sbjct: 73 tga 71
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 87 gattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 146
||||||||| |||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 147 gg 148
||
Sbjct: 128 gg 129
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| |||||| ||| |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatg 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| ||||| | ||||||||||||||||||||||| |||||
Sbjct: 61 catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagt 6
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 85 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgga 144
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 145 acggagggagt 155
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 151 cctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 93
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 120/148 (81%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttaga 129
Query: 125 atgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaa 135
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 136 acggagggagt 146
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||||||
Sbjct: 142 cctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatga 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggag 151
|||| ||||||||| ||||||| |||| || |||||||||||||||||||| |||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 152 t 152
|
Sbjct: 6 t 6
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 120/148 (81%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|| |||||||||||||||| |||||||| | ||||||||||
Sbjct: 93 tttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttaga 34
Query: 125 atgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagt 6
Score = 99.6 bits (50), Expect = 1e-20
Identities = 119/148 (80%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| || ||||| | |||||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|| || ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 70 tctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctaga 129
Query: 125 atgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagt 157
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||||||| |||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 143 cggagggagt 152
||||||||||
Sbjct: 122 cggagggagt 131
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 127 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatga 69
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 120/148 (81%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| |||||||||||||||| |||||| | ||
Sbjct: 70 tctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtgga 129
Query: 125 atgacttacattgtgaaacggagggagt 152
|||||||||||| ||||||||| |||||
Sbjct: 130 atgacttacattatgaaacggaaggagt 157
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||||||||||||||||| | |||||
Sbjct: 66 tgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||| |||||||||||||||||||
Sbjct: 126 tagaatgacttatattgtgaaacggagggagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/144 (79%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||| |||||| |||||||| ||||||| ||||| ||||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||||||| |||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 131 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatga 68
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 127
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||
Sbjct: 87 tctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaa 146
Query: 143 cggagggagt 152
||||||||||
Sbjct: 147 cggagggagt 156
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 120/148 (81%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||||||| |||||||| |||| | ||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
|||||||||||||| |||| |||||||||||||||||| || |
Sbjct: 93 tctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaa 34
Query: 125 atgacttacattgtgaaacggagggagt 152
|||||||||| |||||||||||||||||
Sbjct: 33 atgacttacaatgtgaaacggagggagt 6
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||| | |||| ||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatga 68
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 107 aatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggagg 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||||||||| |||| |||||||| || |||||||||
Sbjct: 133 acttcctccgtttcataatggaagtcattctaacatttccca 92
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||| |||
Sbjct: 6 acttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||||| ||||||||| ||||||| |||||
Sbjct: 66 tgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||| |||| |||||||||||||||||||
Sbjct: 126 tagaatggcttatattgtgaaacggagggagt 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||| |||||||||||| |||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 143 cggagg 148
||||||
Sbjct: 117 cggagg 122
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||| |||
Sbjct: 126 acttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaa 67
Query: 61 tga 63
|||
Sbjct: 66 tga 64
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttc 39
||||||||||||||||||||||||||||| |||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 114 gaaatgttagaatgacttacattgtgaaacggagg 148
|||||| ||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 67 gtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaa 126
Query: 142 acggaggga 150
|||||||||
Sbjct: 127 acggaggga 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggga 150
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| ||||||||| || |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 86
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 124/152 (81%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||| ||||||| |||||||||||||||| ||||||
Sbjct: 66 tgaatctat------------gtctagtttcattaacatcaatatgaatgtgggaaatgc 113
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||| ||||||||
Sbjct: 114 tagaatgacttacattgtgaaaccgagggagt 145
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 141 cctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 83
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 124/152 (81%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| ||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| |||||||||||||||| ||||||
Sbjct: 66 tgaatctagacatct------gtctagattcattgacatcaatatgaatgtgggaaatgc 119
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||||||||||||||
Sbjct: 120 tagaatgacttacattatgaaacggagggagt 151
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 135 acttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaa 76
Query: 61 t 61
|
Sbjct: 75 t 75
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| |||| ||||||||||||| || |||||| || |||||||| |||||||||
Sbjct: 65 gtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaa 124
Query: 142 acggagg 148
|||||||
Sbjct: 125 acggagg 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattca 48
||||||||||||||||||||||||| ||| ||| |||||||| |||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 105 tgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 89 ttcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 149 gagt 152
||||
Sbjct: 145 gagt 148
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| |||||||||||||||||||| ||||||||| || ||||||||||||| ||||||
Sbjct: 144 cctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatga 86
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 103 bits (52), Expect = 7e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||| |||| ||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 143 cggagggagt 152
||||||||||
Sbjct: 135 cggagggagt 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatga 68
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 119 cctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 145 gagggagt 152
||||||||
Sbjct: 122 gagggagt 129
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 125 cctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 67
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||| |||||||||| ||||||||| |||||||| ||| ||||||||||||| |||
Sbjct: 2 acttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgttaa 61
Query: 61 t 61
|
Sbjct: 62 t 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| |||||||||||||||| ||||| || ||||||||| |||||||||| ||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagagg 6
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 145 gagggagt 152
||||||||
Sbjct: 132 gagggagt 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatga 77
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 134 acggagggagt 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 117/144 (81%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgan 64
||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatga- 82
Query: 65 nnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttaga 124
| ||||||| |||| ||||||||| ||||||||||||| ||||
Sbjct: 81 ------------atctagactagatttattaacatcaatataaatgtgagaaatgctaga 34
Query: 125 atgacttacattgtgaaacggagg 148
|||||||||||| |||||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 136 acttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 93.7 bits (47), Expect = 7e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttaga-atgacttacattgtgaa 141
||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagg 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattt-tagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||||| | || ||||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgttaatga 69
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || |||||| | |||||||||||||||||||
Sbjct: 76 gtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatga 68
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 86 agattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 145
|||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 146 agg 148
|||
Sbjct: 12 agg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggag 151
|||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 152 t 152
|
Sbjct: 136 t 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
|||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 132 cctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagt 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct: 130 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 125 acggagggagt 135
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatga 73
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 94 tagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||| |||||||| |||||| |||||||||||||||||||||
Sbjct: 64 tagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| || |||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| ||||| |||||||||||| |||||| ||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||||||| ||||||||||| | |||||||||| | |||||||||||||
Sbjct: 87 gtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || || |||| |||| |||||||| |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatga 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||| ||||||||| ||||||||||| | |||| || || | |||||||| |||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 6 ctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatg 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||| || ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 73 catcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagt 128
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||| |||||||||||||||| ||||| |||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagt 129
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| ||| ||||| || ||||||||||||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||| ||||| ||||||||||||| ||||||||| || |||||||||
Sbjct: 125 cctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || |||||| | |||||||||||||||||||
Sbjct: 85 gtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaa 144
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 145 acggagggagt 155
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatga 93
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144 cctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatga 86
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| || |||||| || ||||||||| ||||||||
Sbjct: 78 gtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaa 137
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 138 acggagggagt 148
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttccca 42
|||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 6 acttcctctgtttcacaatgtaagtc-ttctagcatttccca 46
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||| |||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 143 cggagggagt 152
||||||||||
Sbjct: 113 cggagggagt 122
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||| |||||||||| | ||||||||||||| ||||||
Sbjct: 118 cctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatga 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatatt 46
||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 115 aaatgttagaatgacttacattgtgaaacggagg 148
||||| ||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||| | ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 86 tctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaa 145
Query: 143 cggagggagt 152
||||||||||
Sbjct: 146 cggagggagt 155
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| |||||||| ||| | |||||||||| |||||| ||||||||||| ||||||||
Sbjct: 76 gtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||| || ||||||| | ||| ||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatga 93
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||| ||||||||| |||||| |||||
Sbjct: 66 tgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaattc 125
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|| ||||||||| |||||||||||||||||||
Sbjct: 126 taaaatgacttagattgtgaaacggagggagt 157
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||||| || ||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatga 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 143 cggagg 148
||||||
Sbjct: 136 cggagg 141
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 145 gagg 148
||||
Sbjct: 138 gagg 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatg 62
||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatg 67
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaa 119
Query: 143 cggagggagt 152
||||||||||
Sbjct: 120 cggagggagt 129
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
|||||||||||||||| |||||| ||||||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| ||||||||| || | |||||| ||||||||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||| |||||||||| | || ||||| ||| ||||||||||||| ||||||
Sbjct: 125 cctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatga 67
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/152 (80%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 66 tgaatttagatatatc------tctagattcattagcatcaatataaatgtggaaaatgc 119
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|| ||||||||| |||||||||||||||||||
Sbjct: 120 taaaatgacttatattgtgaaacggagggagt 151
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||||||||||| | ||||||||||||| || |||||||||||||||||||
Sbjct: 75 tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||||||||| |||||| || ||||||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 143 cggagggagt 152
||||||||||
Sbjct: 136 cggagggagt 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 141 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatga 83
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 143 cggagggagt 152
||||||||||
Sbjct: 136 cggagggagt 145
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 99.6 bits (50), Expect = 1e-20
Identities = 115/141 (81%), Gaps = 10/141 (7%)
Strand = Plus / Minus
Query: 8 ccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatgannnn 67
|||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatat 81
Query: 68 nnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgttagaatg 127
|||||||||||||| ||| ||||| |||||| |||||| |||||||
Sbjct: 80 atat----------gtctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 128 acttacattgtgaaacggagg 148
|||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagg 10
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 148 ggagt 152
|||||
Sbjct: 143 ggagt 147
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/152 (80%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||
Sbjct: 157 acttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaa 98
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||||||| | ||||||||| |||||| ||||||
Sbjct: 97 tgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgc 38
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
| |||||||||| ||||||||||||||||||
Sbjct: 37 aaaaatgacttactttgtgaaacggagggagt 6
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||| |||||| |||||| || |||||||||| ||||||||
Sbjct: 88 tctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaa 147
Query: 143 cggagg 148
||||||
Sbjct: 148 cggagg 153
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 97.6 bits (49), Expect = 4e-20
Identities = 123/152 (80%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||| ||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaa 65
Query: 61 tgannnnnnnnnnnnnnnnnngtctagattcattagcatcaatatgaatgtgagaaatgt 120
||| |||||||| |||| ||||||||||||||||| ||||||
Sbjct: 66 tgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatgg 122
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
| |||||||||||||| |||||||||||||||
Sbjct: 123 tggaatgacttacattatgaaacggagggagt 154
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatg 62
||||||||||| ||||||||||||| | ||||||||| |||||||||||||| ||||
Sbjct: 150 cctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatg 93
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| ||||||||| || |||||||||| || |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 125 cctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagt 129
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 145 gagggagt 152
||||||||
Sbjct: 132 gagggagt 139
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| |||||||| ||| ||||||||||||| ||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatga 77
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 151 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 96
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||| ||| |||||||| |||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatga 68
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 96 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 147
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 145 gagggagt 152
||||||||
Sbjct: 118 gagggagt 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||| ||||||||||||| ||||||||| |||||||||||||||
Sbjct: 121 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgat 71
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||| ||||||||| |||||||| ||| ||| |||||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||| |||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 143 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 88
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| || | |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 73 gtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 132
Query: 142 acggagg 148
|||||||
Sbjct: 133 acggagg 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||| | |||||||||||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 148 ggagt 152
|||||
Sbjct: 10 ggagt 6
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||| ||||||| |||||||| ||||||||||||| |||||| ||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagt 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||| |||||| |||||||||||||||| ||||| || ||| |||||||||
Sbjct: 138 cctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 130 acttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 75 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagg 126
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 89 ttcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| ||||| ||| |||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 149 gagt 152
||||
Sbjct: 117 gagt 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||| ||||||
Sbjct: 116 cctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatga 58
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| ||||||||| || |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||| |||||||||||||||||||||||||||
Sbjct: 79 tagattgacttacattgtgaaacggagggagt 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcat 36
||||||||||||||||||||||| | ||||||
Sbjct: 106 cctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||| || |||| ||| ||||||| |||||||||||||||||||||| | ||
Sbjct: 67 gtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaa 126
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 127 acggagggagt 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| ||||||||||||| || |||||| || |||||||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaacatttctcacattcatatggatg 61
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||| ||||| |||||||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 58 gtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaa 117
Query: 142 acggagg 148
|||||||
Sbjct: 118 acggagg 124
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 128 acttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaa 69
Query: 61 tg 62
||
Sbjct: 68 tg 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 128 acttacattgtgaaacggagggagt 152
|||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||| ||| |||| || ||||||||||||| |||||||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagt 135
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 87 gtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
|||||||||||||||||||| |||| ||| |||||||| ||||||||||||
Sbjct: 153 cctccgtttcacaatgtaagacattctagtatttcccacattcatattgat 103
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 7e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgactta 132
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 54 gtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacatt 136
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 21 taagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatga 62
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||| ||||||||| |||| | ||||||||| |||||| || ||||||||||||||||||
Sbjct: 76 gtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||| ||||||||||||||||| || |||||||| |||| ||||||
Sbjct: 151 cctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatga 93
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||
Sbjct: 113 acttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaa 54
Query: 61 tga 63
|||
Sbjct: 53 tga 51
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 148 g 148
|
Sbjct: 109 g 109
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcat 49
||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| || | ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 87 gtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| || | ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 75 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 16
Query: 143 cggagggagt 152
|||| |||||
Sbjct: 15 cggaaggagt 6
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| |||||||||||||||||| || |||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 61 tga 63
|||
Sbjct: 71 tga 69
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||||||||||||| | ||||| || ||||||||| ||||||||
Sbjct: 61 gtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaa 120
Query: 142 acggagg 148
|||||||
Sbjct: 121 acggagg 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
|||| ||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 6 actttctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
||||||||| | |||||| |||||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||
Sbjct: 59 gtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaa 118
Query: 142 acggagg 148
|||||||
Sbjct: 119 acggagg 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||||||||||||| ||| ||||||||| || ||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||||||| ||||| |||||| |||| |||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 150 agt 152
|||
Sbjct: 8 agt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||| | |||||||||||| ||| |||||||||||||
Sbjct: 123 cctccgtttcacaatgtaatttattttagcattttccacattcatattgatg 72
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| ||||| || ||| | |||||||||||||||||||||||
Sbjct: 72 catcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagt 127
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 89 ttcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 agaatgacttacattgtgaaacggagggagt 152
|||||||||| |||||||||||| |||||||
Sbjct: 69 agaatgacttgcattgtgaaacgaagggagt 99
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||||||||||||| ||| || |||||| || |||||||||||||||| |
Sbjct: 76 gtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtgga 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 10 cctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgctaatga 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||||||||||||||||||||||| |||| |||||||||||| |||||||||||||
Sbjct: 131 acttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggagg 127
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||
Sbjct: 64 gtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaa 123
Query: 142 acggagg 148
|||||||
Sbjct: 124 acggagg 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 134 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 83
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||| ||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 10 cctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 70
Query: 61 tga 63
|||
Sbjct: 69 tga 67
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 125
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 68 gtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaa 127
Query: 142 acggagg 148
|||||||
Sbjct: 128 acggagg 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| || ||||||| ||||| |||||||||||||||| |||||||||||||||
Sbjct: 61 catcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||| ||||||||| || ||||| ||| ||||||||||||| |||
Sbjct: 138 acttcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaa 79
Query: 61 tga 63
|||
Sbjct: 78 tga 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||| ||||||||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 95 agcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgct 58
||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatgct 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 109 tgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||| |||||||| ||||||||| |||||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagt 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 102 cctccgttttacaatgtaaatcattctagcatttccca 65
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 143 cggagg 148
||||||
Sbjct: 105 cggagg 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 114 acttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcat 36
||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatga 68
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| || |||||| | ||||||||||||| |||
Sbjct: 137 acttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgttaa 78
Query: 61 t 61
|
Sbjct: 77 t 77
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggagg 133
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 143 cggagg 148
||||||
Sbjct: 120 cggagg 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||| |||||| |||||||||||| |||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||||||| |||| || ||||| || ||||||||||||| |||
Sbjct: 129 acttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaa 70
Query: 61 tga 63
|||
Sbjct: 69 tga 67
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaa 65
Query: 61 t 61
|
Sbjct: 66 t 66
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| |||||||||||||||| |||| || |||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 124 aatgacttacattgtgaaacggagggagt 152
|||| ||||||||||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagt 109
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||
Sbjct: 121 acttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatg 66
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||| ||| ||||||||| || ||||||||| |||||||||||||||
Sbjct: 66 catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggagg 117
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 108 acttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggagg 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 124 aatgacttacattgtgaaacggagggagt 152
|||||||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcatttta 32
||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttta 37
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| || ||| |||||||||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 145 gagg 148
||||
Sbjct: 124 gagg 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaa 72
Query: 61 tga 63
|||
Sbjct: 71 tga 69
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||| |||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 150 agt 152
|||
Sbjct: 149 agt 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||||||| |||| ||| ||| ||||||||||||| ||||||
Sbjct: 147 cctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatga 89
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 89 ttcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 149 gagt 152
||||
Sbjct: 9 gagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||| |||
Sbjct: 150 acttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaa 91
Query: 61 tga 63
|||
Sbjct: 90 tga 88
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 89 ttcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| || |||||||| ||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatataagtcattctattatttcccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagt 122
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
|||| |||||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 118 cctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 90 tcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| |||||||||||||||| || || || ||||||||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||||||| |||||||||| | ||||||||||||
Sbjct: 125 acttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgat 71
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 148 g 148
|
Sbjct: 121 g 121
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| ||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| |||||||| || | |||| |||||||||||||||| ||||
Sbjct: 87 gtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||| ||||||| ||||||||||||| |||| ||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatga 95
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||| |||| ||||| ||||| | |||| |||||||||||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||| || | || ||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 87 gtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatat 107
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||||| || | || |||||||| | |||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| |||||||||| | |||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||| ||||||| || | |||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatga 68
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||| |||||||| |||| |||| ||||| | |||| |||||||||||||||| |||||
Sbjct: 88 tctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaa 147
Query: 143 cggagg 148
||||||
Sbjct: 148 cggagg 153
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 135 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| |||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacatttatattgat 60
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 135 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||||||| |||||||||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 131
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||||| |||| ||| | | |||||||||||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| || |||||||| | ||||||| || | ||||||||||||||
Sbjct: 88 tctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | | ||||||| | || |||||||| |||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatga 68
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 9 cgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatga 51
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagt 6
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||||||||||||||||| |||||| || |||||||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcat 49
||||||||||||||||||| ||||| ||||||||| || ||||||
Sbjct: 10 cctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| |||
Sbjct: 129 acttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaa 70
Query: 61 tga 63
|||
Sbjct: 69 tga 67
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||||| | |||| ||| |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||||||||||| |||| || ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 145 gagg 148
||||
Sbjct: 122 gagg 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| |||||| |||||||||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 1 acttcctccgttt-cacaatgtaagtcattttagcatttcccatattcatattga 54
||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 115 acttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||| || |||||||| ||||||||||||| ||| |||
Sbjct: 133 acttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaa 74
Query: 61 tga 63
|||
Sbjct: 73 tga 71
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||| ||||||||| || ||||| ||||| ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 143 cggagg 148
||||||
Sbjct: 124 cggagg 129
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||| ||||| |||||||||||||||| |||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||| ||||||||||||| || ||||| ||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||||||||| | |||| ||||| || |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 143 cggagg 148
||||||
Sbjct: 120 cggagg 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||||||||||||||||| || | |||||||||| |||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaa 70
Query: 61 tga 63
|||
Sbjct: 69 tga 67
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||| ||||||||||||||||||| |||||||| ||| ||||
Sbjct: 10 cctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||| ||||| || ||||||||||||||| |||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagt 6
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||||||||||| | || |||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| |||||||| | | |||| |||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| ||||| | | || |||||||| |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 7 tccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 118 acttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgga 146
||||||||||||| || |||||| |||||||||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||| ||| |||||||| |||||||||||| |||||||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||| |||
Sbjct: 6 acttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatat 45
||||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 123 cctccgtttcataatgtaagtcattgtagcatttcacatat 83
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 114 gaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| || ||||||||||||| |||||||||||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagt 127
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcata 50
||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 94 acttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 103 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 113 agaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttc 39
|||| |||||||||||||||||||| |||||||||
Sbjct: 10 cctctgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| ||||||||| | |||| ||||| ||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 143 cggagg 148
||||||
Sbjct: 120 cggagg 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||||||| ||||||||
Sbjct: 129 acttcctccgtttcacaatgtaagtcattctagcattt 92
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||| ||||||||||||||| ||| ||||| || ||||||||
Sbjct: 10 cctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 91 cattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| ||||||||| || ||| ||||| ||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaa 65
Query: 61 tg 62
||
Sbjct: 66 tg 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 116 aatgttagaatgacttacattgtgaaacggagggagt 152
|||| ||||||||||||||||||| |||||| |||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagt 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 tccgtttcacaatgtaagtcattttagcatt 37
|||||| |||||||||||||||| |||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||||||||||| | || |||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 147
Query: 143 cggagg 148
||||||
Sbjct: 148 cggagg 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| |||||||| | | |||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattga 54
||||||||||||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 113 acttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| |||||| |||||||||||| |||||||||||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagggagt 6
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||| ||||||||| |||||||| ||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 81.8 bits (41), Expect = 2e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||| || || |||||||||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaa 64
Query: 61 tga 63
|||
Sbjct: 65 tga 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaacggaggg 108
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||| ||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
|||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 148 g 148
|
Sbjct: 126 g 126
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||||||||||||||||| |||||||| || || ||||||||| |||
Sbjct: 130 acttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaa 71
Query: 61 tga 63
|||
Sbjct: 70 tga 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattt 43
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 115 aaatgttagaatgacttacattgtgaaacggagggagt 152
||||| || |||||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 99 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| |||| |||||||||||||||| ||||| |||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagt 115
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||||||||| ||| |||| || |||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattga 54
||||| ||||| ||||||||||||| ||| |||| || |||||||||||
Sbjct: 111 cctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||||| || ||||||||||||| |||||||||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagt 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct: 133 cctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||||||||| |||||||||| ||||| |||||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 143 cggagg 148
| ||||
Sbjct: 15 cagagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||| |||||| ||| ||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 6 acttcctctgtttcataatataagtcattctagcattttccacattcatactgatgctaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| ||||||||| | |||| ||||| |||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||||||||| ||| |||||||| ||| | | ||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatga 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 125 atgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagt 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcat 28
||||||||||||||||||||||||
Sbjct: 121 cctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||||| | |||| || ||||||||||||| |||||||
Sbjct: 90 tagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||||||||||||||||| |||| |||||||| |||| ||||||
Sbjct: 153 cctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatga 95
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||| || || | || | |||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||| |||| ||||||||| | |||| ||||| ||||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 145 gagggagt 152
||||||||
Sbjct: 131 gagggagt 138
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
||||||||||||||||||||||||| |||||||| ||| | | ||||||||| ||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| | ||||| ||||| || ||||||||||||||||||| |||||||||
Sbjct: 60 atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatggagggagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||| ||||||||||||||||||||||||||||
Sbjct: 10 cctccatttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||||| || |||| |||| ||| ||||||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| ||||||||||||| ||||||||| |||||| |||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattgatatagatg 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||| || |||| | ||||||||| ||||| || ||||||||||||| ||||
Sbjct: 87 gtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattatgaa 146
Query: 142 acggagggagt 152
|| ||||||||
Sbjct: 147 acagagggagt 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
|||| |||||| ||||||||||||| ||||||||
Sbjct: 153 cctctgtttcataatgtaagtcattgtagcattt 120
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagt 124
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 6
Score = 71.9 bits (36), Expect = 2e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||||||| | |||||| || | |||| ||||| | |||||||||||||
Sbjct: 87 gtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || ||||||| |||| |||||| | |||||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatga 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| ||| ||||| ||||| | |||| ||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | |||| ||||| |||||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||||||||| || ||||||| |||| |||||||| |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | |||| ||||| |||||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||||||||| || ||||||| |||| |||||||| |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | |||||| | || |||| || || | |||||||| ||||
Sbjct: 85 gtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaa 144
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 145 acggagggagt 155
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | |||| |||||||||||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaa 120
Query: 142 acggagg 148
| |||||
Sbjct: 121 atggagg 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattacctatattcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||| ||||| ||||||||||||| ||||||| | || |||||||| |||| |||
Sbjct: 131 acttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaa 72
Query: 61 tga 63
|||
Sbjct: 71 tga 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 116 aatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||||||||||||| |||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagt 6
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagt 124
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| |||||||||||| | ||||| ||||| |||| |||
Sbjct: 136 acttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaa 77
Query: 61 tga 63
|||
Sbjct: 76 tga 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| |||| ||||| || |||| |||| || |||| |||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 148 g 148
|
Sbjct: 132 g 132
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | ||| ||||| | |||||||||||||
Sbjct: 87 gtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| |||||||| |||| |||||||| || | | | ||||| | |||||||||||||
Sbjct: 76 gtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || ||| ||| |||| |||||||| |||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatga 95
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | |||||||||| ||||||||||| | |||| |||
Sbjct: 157 acttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaa 98
Query: 61 tga 63
|||
Sbjct: 97 tga 95
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | |||||| || | |||| || || | |||||||||||||
Sbjct: 87 gtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaa 146
Query: 142 acggagg 148
|||||||
Sbjct: 147 acggagg 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
|||||||||||||||||||| | || ||||||| | ||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagcattgctcatatacatat 56
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| |||||||||||| | ||||| ||||| |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 88 attcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggag 147
|||||||| |||| ||||| || |||| |||| || |||| |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 148 g 148
|
Sbjct: 10 g 10
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| |||||||| |||||| |||||||||||| |||||||||||||||||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 86 agattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 145
|||||||||| |||||| |||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 146 agg 148
|||
Sbjct: 128 agg 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||
Sbjct: 134 acttcctccgtttcacaatataagtcattctagcatttcccacattcacattgat 80
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||| ||||||||| ||||||||| || ||||| ||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcacacattcacattgat 60
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||||| |||| || || | |||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||||||||| | |||| ||||| | |||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 147
Query: 143 cggagg 148
||||||
Sbjct: 148 cggagg 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | |||||||||| | || |||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatga 68
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 107 aatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 148
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||||||||||||||||||| ||||||||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttccca 107
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 145
|||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 8 ccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
|||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||||| |||| || || | |||||||| ||||
Sbjct: 87 gtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||||||||| | |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 143 cggagg 148
||||||
Sbjct: 15 cggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | |||||||||| | || |||||||| |||| ||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatga 95
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| |||||||| |||| |||| ||||| | |||||||| ||||
Sbjct: 87 gtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | ||| ||||| |||||||||| ||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| | ||||||||||| |||| ||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatga 95
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||| |||||||| ||| ||| ||||| || ||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 143 cggagggagt 152
|||||||||
Sbjct: 96 tggagggagt 105
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||| ||||||||||||| |||||||||||||| |||||| |||||||| |||||||
Sbjct: 101 cctccatttcacaatgtaaatcattttagcatttttcatatttatattgatactaatga 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcatt 29
|||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 124 aatgacttacattgtgaaacggagg 148
|||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 99 tcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| || ||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatt 37
||||| ||||||||||||| ||||||||| |||||||
Sbjct: 103 acttcttccgtttcacaatataagtcattctagcatt 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 116 aatgttagaatgacttacattgtgaaacgga 146
|||| |||||||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||| |||| ||||| |||||||||| ||||| |||||||||||||||| |||||
Sbjct: 74 tctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatgaaa 133
Query: 143 cggagggagt 152
| ||||||||
Sbjct: 134 cagagggagt 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| ||||| ||||||||||| ||||| |||||||||||||||| |||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggagg 10
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| ||||||||||||| |||||||| || ||||||| ||||| |||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgttaa 65
Query: 61 t 61
|
Sbjct: 66 t 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
|||| |||||| ||||||||||||| ||| |||||||| ||||||| ||||| ||||
Sbjct: 139 cctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaat 83
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||||||| || ||||||||| |||||||||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 145 gaggga 150
||||||
Sbjct: 13 gaggga 8
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||| |||||||||||||||||| || |||||| ||||||
Sbjct: 136 acttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatg 81
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||| |||||||||| ||||| || ||||||||| |||||||||||||||
Sbjct: 81 catcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggagg 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
||||||||||||||| ||||||||| ||||||||| ||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgat 60
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
|||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 22 aagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatga 42
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 108 atgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 116 aatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||||| |||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagt 94
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatt 37
||||||||||||||||||| ||||| |||||||
Sbjct: 90 cctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
|||||||||||||||| ||||||||||| | |||| ||||| | |||||||| ||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 144 ggagggagt 152
|||||||||
Sbjct: 149 ggagggagt 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| |||| |||||||| ||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatga 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||| ||| |||| |||||| | || | ||||| | |||||||| ||||
Sbjct: 76 gtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattatgaa 17
Query: 142 acggagg 148
|| ||||
Sbjct: 16 acagagg 10
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccc 41
|||||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcatttccc 46
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||||||| ||||||||
Sbjct: 107 acttcctccgtttcacaatgtaagtcattctagcattt 70
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 104 atgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| | |||||| || |||||||||||||||||||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 115 aaatgttagaatgacttacattgtgaaacggagg 148
||||| ||||||||||||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggagg 103
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 87 gattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
|||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 22 aagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatga 42
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 87 gattcattagcatcaatatgaatgtgagaaatgttagaatga 128
|||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 25 tcattttagcatttcccatattcatattgatgctaatga 63
||||| |||||||||||| ||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatga 49
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
||||||||||||| ||| ||| ||||||| | ||| |||||||||||| ||||||||||
Sbjct: 87 ctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaac 146
Query: 144 ggagggagt 152
|||||||||
Sbjct: 147 ggagggagt 155
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 86 agattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacgg 145
|||||||||| |||| ||||||||||| | |||| |||||||||||| ||| ||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacgg 13
Query: 146 agg 148
|||
Sbjct: 12 agg 10
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 3 ttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatg 62
||||||||||||| ||| ||||||||| ||||||| |||| |||||||| |||| |||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 63 a 63
|
Sbjct: 68 a 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| ||||||||| ||| ||| |||| |||| ||| ||| |||||||
Sbjct: 151 cctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatga 93
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||| ||||||| |||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 145 gagg 148
||||
Sbjct: 150 gagg 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | || ||||||| | || || ||||| |||| |||
Sbjct: 157 acttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaa 98
Query: 61 tga 63
|||
Sbjct: 97 tga 95
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||| ||| ||| |||||||| |||||||||
Sbjct: 139 acttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatatt 52
||||||||||||||||||||||||| ||| || ||||| || |||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 101 aatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||||| ||||| || ||| |||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggagg 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 92 attagcatcaatatgaatgtgagaaat 118
|||||||| ||||||||||||||||||
Sbjct: 90 attagcatgaatatgaatgtgagaaat 64
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggaggg 149
|||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||| ||||||||||||| |||||||||||||||||| |||||| | ||| ||| |||
Sbjct: 6 acttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||| ||| | ||| ||| ||||| || ||||||||| ||||||||
Sbjct: 76 gtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaa 17
Query: 142 acgga 146
|||||
Sbjct: 16 acgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||||| ||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagg 88
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||| ||||| ||||||||| ||||||||| || ||| |||||||||
Sbjct: 92 acttcctccgttttacaatataagtcattctagcatttctcacatttatattgatg 37
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| |||||||| |||||| |||||| ||||| |||||||||||||||||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagt 6
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 110 gtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaacggagg 121
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttc 39
||||||||||||||||||||||||||||| |||||||||
Sbjct: 125 acttcctccgtttcacaatgtaagtcattctagcatttc 87
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||| ||||| ||| |||||||||||| ||||| |||||||
Sbjct: 10 cctccgtttcacaatataagttattctagcatttcccacattcacattgatg 61
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||| | | |||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||||||| || |||||||| | |||| ||||| | |||||||| ||||
Sbjct: 76 gtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||||||| | || ||||||| |||| ||||| || ||||||||
Sbjct: 6 acttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || ||||||| ||| |||||||| |||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatga 95
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||||| | |||| ||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 145 gagggagt 152
||||||||
Sbjct: 132 gagggagt 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| |||| |||||||| |||| ||||||
Sbjct: 135 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatga 77
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||||||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 67 gtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaa 126
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 127 acggagggagt 137
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| |||| |||| ||||||||||| |||| |||||| ||||||||| ||||
Sbjct: 66 gtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaa 125
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 126 acggagggagt 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgcta 59
||||||||||||||| ||||||||| ||| ||||||| |||| ||||| || |||||||
Sbjct: 6 acttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgcta 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 94 tagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||||| || |||||||| | |||| |||||| ||||||||| |||||||||||
Sbjct: 64 tagcatctatgtgaatgtgggcaatgctagaataacttacattatgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
||||||||||| ||||||||| ||| ||||||| ||| |||||||| |||| ||||
Sbjct: 132 cctccgtttcataatgtaagttattctagcattgtccacattcatatagatgttaat 76
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| |||||||| |||| ||||||||||| | |||| ||||| | |||||||| ||||
Sbjct: 76 gtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| ||||||||||| | |||| ||||| | |||||||| |||||||||||||||
Sbjct: 86 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagt 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| |||| |||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatga 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| |||||||| | || ||||||| |||| |||||||| ||||
Sbjct: 137 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 86
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| |||||||| || | ||| ||||| | |||||||||||||
Sbjct: 87 gtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || ||| ||| ||||||||||||| |||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatga 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| |||||||| |||| |||||||| || | | | ||||| | ||||||| |||||
Sbjct: 76 gtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||| ||||||| | || ||| | | ||||||||||||| |||| ||||||
Sbjct: 10 cctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatga 68
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| |||| |||| ||||||||||| |||| ||||| | |||||||||||||
Sbjct: 69 gtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaa 128
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 129 acggagggagt 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||||||||||||||||||| | |||||||||| |||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagactttttagcattatccatattcatatagatg 61
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaat 61
|||||||||||||||||||| | || ||||||| ||| |||||||| |||| ||||
Sbjct: 135 cctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgttaat 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 129 cttacattgtgaaacggagggagt 152
||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagt 6
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||| ||||||||||||| ||||||| ||||||| |||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||| ||||| | |||| |||||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 142 acggagggagt 152
|| ||||||||
Sbjct: 121 acagagggagt 131
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 116 aatgttagaatgacttacattgtgaaacggagg 148
|||| |||||||||||||||| |||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttc 39
||||||||||||||||||||||||||||| |||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 114 gaaatgttagaatgacttacattgtgaaacggagg 148
|||||| ||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 107 aatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||||| || ||||||||| ||| ||||||||| |||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacggatggagt 90
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tccgtttcacaatgtaagtcattttagcatttc 39
||||||||| ||| |||||||||||||||||||
Sbjct: 84 tccgtttcataatataagtcattttagcatttc 52
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||| ||||| || || | ||| ||||||||||||||||| ||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatt 37
||||||||||||||| ||||||||||||| |||||||
Sbjct: 135 acttcctccgtttcataatgtaagtcattctagcatt 99
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 116 aatgttagaatgacttacattgtgaaacggagg 148
|||| |||||||||||||||| |||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggagg 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||| ||||||||||||| || ||| ||||||| |||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaatattgcccatatgcatat 56
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | |||||||||| |||| ||||| | |||||||||||||
Sbjct: 76 gtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
|||||||||||| |||| ||||| ||||| | |||| ||||| | |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 144 ggagggagt 152
|||||||||
Sbjct: 138 ggagggagt 146
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatt 37
|||||||||||||||||||||||| | || |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| |||| || ||||| |||| ||||||
Sbjct: 142 cctccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatga 84
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | || ||||||| ||||||||||| | |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | |||||| || | |||| ||||| | |||||||||||||
Sbjct: 76 gtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||| | ||| | ||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| |||| |||| ||||||||||| | |||| ||||| | |||||||||||||
Sbjct: 63 gtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaa 122
Query: 142 acggagg 148
|||||||
Sbjct: 123 acggagg 129
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | || ||||||| |||| |||||||| |||| |||
Sbjct: 133 acttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaa 74
Query: 61 t 61
|
Sbjct: 73 t 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||||| |||| ||||| | |||||| | |||||||||||||||
Sbjct: 56 atatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagt 6
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||||||||||||| |||||||| || | |||| ||||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 143 cggagggagt 152
||||||||||
Sbjct: 130 cggagggagt 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||| |||| | || ||||||| ||||||||||||| |||||||||||
Sbjct: 135 cctccgtttcataatataagactttctagcattacccatattcatatagatgctaatga 77
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| |||||||| |||| |||| ||||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 143 cggagg 148
| ||||
Sbjct: 15 cagagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||| |||||| ||| |||||| || ||||||| | ||||||||||| |||| |||
Sbjct: 6 acttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttag 123
|||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 42 gtctagtttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttag 123
||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 75 gtctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 34 catttcccatattcatattgatgctaatga 63
||||||||| ||||||||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatga 34
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 34 catttcccatattcatattgatgctaat 61
||||||||| ||||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaat 85
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 115 aaatgttagaatgacttacattgtgaaacggagggagt 152
||||| ||||||||||||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagt 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattc 47
|||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 115 aaatgttagaatgacttacattgtgaaacggagggagt 152
||||| ||||||||||| ||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagggagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||||||||||||||||| ||||||||
Sbjct: 111 cctccgtttcacaatgtaagtcattctagcattt 78
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcata 50
||||||||||||||||||||||||||||| ||| |||| ||| |||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| || ||||| ||| ||||||| |||||||||||| ||||||||
Sbjct: 68 gtctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaa 127
Query: 142 acggagg 148
|||||||
Sbjct: 128 acggagg 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 103 tatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttc 39
||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 138 acttcctccgtttcacaatataagtcattctaggatttc 100
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttccca 42
|||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 6 acttcctccgttccacaatgtaagtcattctagcatttccca 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagt 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 108 atgtgagaaatgttagaatgacttacattgtgaaacggagg 148
||||| |||||| ||||||||||||||||||| ||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagc 34
||||||||||||||||||||||||| ||||
Sbjct: 89 cctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| ||||||||| ||| ||||||||||| | |||| ||||| | |||||||||||||
Sbjct: 55 gtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaa 114
Query: 142 acgga 146
|||||
Sbjct: 115 acgga 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||| |||||||||||||||||| | || ||||||| |||| |||||||| ||| ||||
Sbjct: 125 acttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaa 66
Query: 61 tga 63
|||
Sbjct: 65 tga 63
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 108 atgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagt 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||| |||||||||||||||||||||||||| ||| |||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacg 14
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
||||||||||| ||||||||||||| ||||||||||||
Sbjct: 123 cctccgtttcataatgtaagtcattctagcatttccca 86
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaac 143
|||||||||||| ||||||||||||| | | |||| ||||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 144 ggagggagt 152
|||||||||
Sbjct: 14 ggagggagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| |||||||| | || ||||||| || ||||||||||||||| ||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||| ||||||||||| |||| ||||| | |||||||| ||||
Sbjct: 85 gtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaa 144
Query: 142 acggagg 148
|||||||
Sbjct: 145 acggagg 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatat 51
||||||||||||||| |||||||| | || ||||||| ||| ||||||||
Sbjct: 155 acttcctccgtttcataatgtaagactttctagcattgtccacattcatat 105
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
||||||| ||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgactt 131
||||||| ||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 22 aagtcattttagcatttcccatattcatattgatgctaatg 62
|||||||| |||||||||||| ||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatg 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 22 aagtcattttagcatttcccatattcatattgatgctaatg 62
|||||||| |||||||||||| ||||||||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatg 83
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
||||||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 98 atcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||||||| ||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggagg 103
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgat 55
|||||||||||||||||||| |||||||| ||| |||| || ||| ||||||||
Sbjct: 107 acttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgat 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcatt 29
|||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcc 40
|||| |||||||||||||||||||||||| ||||||||||
Sbjct: 88 acttactccgtttcacaatgtaagtcattctagcatttcc 49
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 114 gaaatgttagaatgacttacattgtgaaacggag 147
|||||| |||||||||||||||||||||||||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggag 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcatt 29
|||||||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcatt 34
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagg 148
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| | ||||||||| | |||| ||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 102 atatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||| ||||||| |||| || || | ||||||||||||||||||||||||
Sbjct: 109 atatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagt 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatt 37
|||||||||||||||||||| | ||||||||||
Sbjct: 155 cctccgtttcacaatgtaagactttttagcatt 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||| ||||||||||||||| | || ||||||| |||| |||||| | |||| ||||||
Sbjct: 10 cctctgtttcacaatgtaagactttctagcattacccacattcatttagatgttaatga 68
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||||| ||| ||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 48 catcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagt 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||||||||||| ||||| |||||||| |||||| ||||||||
Sbjct: 99 cctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatg 48
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 108 atgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| |||| |||||||||||| ||||||||||| |||||||
Sbjct: 50 atgtgaaaaatactagaatgacttatattgtgaaacgaagggagt 6
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||| ||||| | |||| ||||| | |||| |||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 145 gagggagt 152
||||||||
Sbjct: 128 gagggagt 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| |||| | || ||||||| |||| || ||||| |||| ||||||
Sbjct: 131 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatga 73
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||| ||||| | |||| ||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 145 gagggagt 152
||||||||
Sbjct: 13 gagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||||||| |||| | || ||||||| |||| || ||||| |||| ||||||
Sbjct: 10 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatga 68
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| ||| || || | |||||||||||||
Sbjct: 87 gtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | |||||| ||| ||| |||||||| |||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatga 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||| |||| | || ||| ||| ||||||||||||| |||| ||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatga 68
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||| ||||||| |||| |||||||| || | ||| ||||| | |||| ||| |||||
Sbjct: 75 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacatt 136
||||||||||||| ||||| ||||||||||| | |||||||||| | ||||||||
Sbjct: 66 gtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 84 ctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacatt 136
|||||||||||||||| ||||||||||| | |||| ||||| | ||||||||
Sbjct: 53 ctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | ||||||||| |||| ||||| | |||||||||||||
Sbjct: 76 gtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | || ||||||| ||| |||||| | |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||||||||||||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 87 gtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaa 146
Query: 142 acggagg 148
|||||||
Sbjct: 147 acggagg 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| | | |||| | || ||||||| |||| |||||||| ||||||||
Sbjct: 157 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgctaa 98
Query: 61 tga 63
|||
Sbjct: 97 tga 95
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagca 35
||||||||||||||||||||||||||||| |||||
Sbjct: 6 acttcctccgtttcacaatgtaagtcattctagca 40
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagg 148
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| |||| ||||| | |||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaa 120
Query: 142 acggagggagt 152
|| ||||||||
Sbjct: 121 acagagggagt 131
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| || | | ||||||||| | |||| ||||| | |||||||||||||
Sbjct: 76 gtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcat 49
|||||||||||||||||||||||| | || ||||||| |||| ||||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcattacccacattcat 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||| || || |||| ||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 145 gagggagt 152
||||||||
Sbjct: 150 gagggagt 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | || ||||||| |||||| ||||| |||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatga 95
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| ||| || || | |||||||||||||
Sbjct: 76 gtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaa 17
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 16 acggagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
|||||||||||||||||||| | |||||| ||| ||| |||||||| |||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatga 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||| |||| | || ||| ||| ||||||||||||| |||| ||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatga 95
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||| ||||||| |||| |||||||| || | ||| ||||| | |||| ||| |||||
Sbjct: 88 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 147
Query: 143 cggagggagt 152
||||||||||
Sbjct: 148 cggagggagt 157
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||||||| |||| |||| | ||| ||||| | |||| ||||| | |||||||||||||
Sbjct: 87 gtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaa 146
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 147 acggagggagt 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaag 24
||||||||||||||||||||||||
Sbjct: 6 acttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttccca 42
|||||||||||||||||||| | || ||||||| ||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgccca 116
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgct 58
|||| |||||||||| |||||||| | || ||||||| ||||||||||||| ||||||
Sbjct: 6 actttctccgtttcataatgtaagactttctagcattgcccatattcatatagatgct 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 129 cttacattgtgaaacggagggagt 152
||||||||||||||||||||||||
Sbjct: 74 cttacattgtgaaacggagggagt 97
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 95 agcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||||| ||||||||||| | |||| ||||| ||||||||||||||||||||||||
Sbjct: 62 agcatctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagt 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
|||||||||||||||||||||||| | || |||| || |||| |||||||| ||||
Sbjct: 6 acttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgct 58
|||||||||||||||||||| || ||||||| |||| |||||||| ||||||
Sbjct: 115 cctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatgct 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagg 148
|||| ||||||||||| | || | ||||| | ||||||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaa 148
Query: 143 cggagggagt 152
||||||||||
Sbjct: 149 cggagggagt 158
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgct 58
||||| ||||| ||| ||||||||| |||||||| ||||||| |||||||||||
Sbjct: 134 cctccatttcataatataagtcattctagcattttccatatttatattgatgct 81
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagggagt 152
|||||||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 95 agcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||||||| ||| || ||||| |||||||||||| ||| ||||| |||||||||
Sbjct: 81 agcatcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagt 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||| ||||||||||||| ||| ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagtattt 43
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||| ||| |||| ||||||||||| |||| ||||| | |||||||| ||||
Sbjct: 37 gtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaa 96
Query: 142 acggaggga 150
|||||||||
Sbjct: 97 acggaggga 105
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatg 127
||||||||||||| || | ||||||||||| ||||||||||||||
Sbjct: 58 tctagattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatg 127
|||||||||||||| || | ||||||||||| ||||| |||||||
Sbjct: 46 gtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatt 37
|||||||||||||||||||||||| | ||||||||||
Sbjct: 155 acttcctccgtttcacaatgtaagactttttagcatt 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| |||| ||||| |||| ||||| | |||||||| |||||
Sbjct: 73 tctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaa 16
Query: 143 cggagggagt 152
||||||||||
Sbjct: 15 cggagggagt 6
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 116 aatgttagaatgacttacattgtgaaacggagggagt 152
|||||||||| | ||||||||||||||||||||||||
Sbjct: 121 aatgttagaaagtcttacattgtgaaacggagggagt 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| | ||||||||| | |||| ||||| | ||| |||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||| ||| | || ||||||| |||| |||||| | |||| |||
Sbjct: 6 acttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaa 125
|||||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaa 125
||||||||||||| |||| ||||||||||| | |||| |||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| ||||||||||| | |||| ||||| | |||||||| |||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagt 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
||||| |||||||| |||| ||||||||||| | |||| || || | ||||||| ||||
Sbjct: 71 gtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaa 130
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 131 acggagggagt 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaatga 63
||||||||||| ||||||| | |||||||||| |||| |||||||| |||| ||||||
Sbjct: 137 cctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgttaatga 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||||| |||||||| | || ||||||| |||| |||||||| ||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||| |||| |||| | ||||||||| | ||| |||||| | |||| |||||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 145 gagggagt 152
||||||||
Sbjct: 116 gagggagt 123
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 113 agaaatgttagaatgacttacattgtgaaacggagggagt 152
||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacgaagggagt 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 115 aaatgttagaatgacttacattgtgaaacggagggagt 152
||||| |||||||||||| ||| |||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 9 cgtttcacaatgtaagtcattttagcatttc 39
||||||| ||||||||||||| |||||||||
Sbjct: 137 cgtttcataatgtaagtcattctagcatttc 107
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 cctccgtttcacaatgtaagtcattttagcattt 38
||||||||||| ||| ||||||||| ||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattt 43
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgaga-aatgttagaatgacttacattgtga 140
|||||||||||||| |||| |||||||||| ||| |||| ||||| | |||||||| |||
Sbjct: 76 gtctagattcattaacatctatatgaatgt-agacaatgctagaaagtcttacattatga 18
Query: 141 aacggagg 148
||||||||
Sbjct: 17 aacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| |||||||| | || ||||||| | | |||||||| |||| |||
Sbjct: 6 acttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 145 gagggagt 152
||||||||
Sbjct: 152 gagggagt 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 145 gagg 148
||||
Sbjct: 13 gagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| | | |||| | || ||||||| |||| |||||||| |||| |||
Sbjct: 6 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 97 catcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
|||| |||||||| |||| |||| ||||| | |||||||||| |||||||||||||
Sbjct: 52 catctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagt 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 5 cctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatg 56
||||||||| |||||||||| | || ||||||| | ||||||||||| ||||
Sbjct: 103 cctccgttttacaatgtaagactttctagcattgctcatattcatatagatg 52
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcat 36
||||||||||||||||| ||||||||||| ||||||
Sbjct: 6 acttcctccgtttcacagtgtaagtcattctagcat 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcattt 38
|||| |||||||||||||| ||||||||| ||||||||
Sbjct: 88 acttactccgtttcacaatataagtcattctagcattt 51
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 115 aaatgttagaatgacttacattgtgaaacggag 147
||||| |||||||||||| ||||||||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggag 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 121 tagaatgacttacattgtgaaacggagg 148
|||||||||||||| |||||||||||||
Sbjct: 37 tagaatgacttacactgtgaaacggagg 10
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| | | |||| | || ||||||| ||||||||||||| |||| |||
Sbjct: 113 acttcctccgtttcatattataagactttctagcattacccatattcatatagatgataa 54
Query: 61 tga 63
|||
Sbjct: 53 tga 51
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| ||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 61 gtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaa 120
Query: 142 acggagggagt 152
|||||||||||
Sbjct: 121 acggagggagt 131
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 110 gtgagaaatgttagaatgacttacattgtgaaacggagggagt 152
||||| |||| ||||| |||||||||| |||||||||||||||
Sbjct: 40 gtgagcaatgctagaaagacttacattatgaaacggagggagt 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtc 26
||||||||||||||| ||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtc 31
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 55 gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaa 114
Query: 142 acggagg 148
|||||||
Sbjct: 115 acggagg 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
||||||||||||||| | | |||| | || ||||||| |||| |||||||| |||| |||
Sbjct: 125 acttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaa 66
Query: 61 tga 63
|||
Sbjct: 65 tga 63
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatttcccatattcatattgatgctaa 60
|||||||||||||||||||||||| | || |||| || |||| |||||| | |||| |||
Sbjct: 6 acttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaa 65
Query: 61 tga 63
|||
Sbjct: 66 tga 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaa 141
|||||||||||||| |||| | ||||||||| | || | || || | |||||||||||||
Sbjct: 76 gtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaa 17
Query: 142 acggagg 148
|||||||
Sbjct: 16 acggagg 10
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatg 119
||||||||||||| |||||||||||||||| ||||||
Sbjct: 42 gtctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 82 gtctagattcattagcatcaatatgaatgtgagaaatg 119
||||||||||||| |||||||||||||||| ||||||
Sbjct: 47 gtctagattcattgacatcaatatgaatgtgggaaatg 84
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tagcatttcccatattcatattgatg 56
|||||||||||| |||||||||||||
Sbjct: 87 tagcatttcccacattcatattgatg 62
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
||||||||||||| |||| ||| |||||| | |||| ||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 143 cggagggagt 152
| ||||||||
Sbjct: 15 ctgagggagt 6
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 83 tctagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaa 142
|||||||| |||| |||| ||||||||||| |||| ||||| | |||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 143 cggagggagt 152
|||||||||
Sbjct: 15 tggagggagt 6
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1 acttcctccgtttcacaatgtaagtcattttagcatt 37
|||||||||||||||||||||||| | || |||||||
Sbjct: 138 acttcctccgtttcacaatgtaagactttctagcatt 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 85 tagattcattagcatcaatatgaatgtgagaaatgttagaatgacttacattgtgaaacg 144
|||||||| || |||| | ||||||||| | |||| ||||| | ||||||||||||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtg-gcaatgctagaaagtcttacattgtgaaacg 130
Query: 145 gagg 148
||||
Sbjct: 131 gagg 134
