miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 1e-56
Identities = 128/134 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||||||||||||| ||||||||||||| ||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 218 bits (110), Expect = 1e-56
Identities = 128/134 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| |||| |||||||||| |||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 210 bits (106), Expect = 4e-54
Identities = 127/134 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 178 bits (90), Expect = 1e-44
Identities = 123/134 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | || ||||||||| ||||||||||||||| ||||| ||||||| ||
Sbjct: 75 atagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 9e-52
Identities = 126/134 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 122/130 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgac 134
Query: 121 ttacattgtg 130
||| ||||||
Sbjct: 135 ttatattgtg 144
Score = 123 bits (62), Expect = 6e-28
Identities = 113/130 (86%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
|||||| |||||||||||| ||||| ||||||||||||||| |||||||||||| | |
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatattgatattaatgaatctaaatag 85
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
|||||| | | |||||||||||| | |||||| |||||| |||||| |||||| ||||||
Sbjct: 84 atatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttac 25
Query: 125 attgtgaaac 134
||||||||||
Sbjct: 24 attgtgaaac 15
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 1e-47
Identities = 122/131 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtga 131
|||||||||||
Sbjct: 135 ttacattgtga 145
Score = 149 bits (75), Expect = 1e-35
Identities = 117/131 (89%)
Strand = Plus / Minus
Query: 4 tcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagaca 63
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Query: 64 tatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataactta 123
|||||| | | |||||||||||| |||||||| |||||| |||||| | ||| |||||
Sbjct: 85 gatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgactta 26
Query: 124 cattgtgaaac 134
|||||||||||
Sbjct: 25 cattgtgaaac 15
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 186 bits (94), Expect = 5e-47
Identities = 124/134 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 186 bits (94), Expect = 5e-47
Identities = 124/134 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| | ||||||||||||| |||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 155 bits (78), Expect = 2e-37
Identities = 120/134 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| ||||||||||||||| |||||| | |||| ||
Sbjct: 75 atagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 186 bits (94), Expect = 5e-47
Identities = 125/134 (93%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctag 88
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 87 acatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actagaataac 29
Query: 121 ttacattgtgaaac 134
||||||||| ||||
Sbjct: 28 ttacattgtaaaac 15
Score = 131 bits (66), Expect = 3e-30
Identities = 118/134 (88%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 15 gttttacaatgtaagttattctagt-tttcccacattcatattgatattaatgaatctag 73
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||||||||||||| |||| ||||||| ||
Sbjct: 74 atagatatatatgtctagattcattaacatcaatatgaatgtggaaaatattagaatgac 133
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 134 ttacattgtgaaac 147
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 186 bits (94), Expect = 5e-47
Identities = 124/134 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| | | |||||| ||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||| |||||| | ||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 5e-47
Identities = 124/134 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctat 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| ||| |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 acatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 170 bits (86), Expect = 3e-42
Identities = 122/134 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| |||||||||||| || ||||| |||||| ||
Sbjct: 88 ataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 186 bits (94), Expect = 5e-47
Identities = 124/134 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| ||||||||| ||||| ||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 155 bits (78), Expect = 2e-37
Identities = 120/134 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| | ||||||||||||| ||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 178 bits (90), Expect = 1e-44
Identities = 124/134 (92%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||| || | |||||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 -cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgac 133
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 134 ttacattgtgaaac 147
Score = 170 bits (86), Expect = 3e-42
Identities = 123/134 (91%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaa 88
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||| | |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 87 acatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 178 bits (90), Expect = 1e-44
Identities = 105/110 (95%)
Strand = Plus / Minus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatct 72
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 73 atttagattcattaaaatcaatatgaatgtgagaaatgttagaataactt 122
|| |||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 131 bits (66), Expect = 3e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatct 72
||||||||||| |||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 73 atttagattcattaaaatcaatatgaatgtgagaaatgttagaataactt 122
| |||||||||||| ||||||||||||||| |||||| |||||| ||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 123/134 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| || |||||||||||| |||||| || ||| ||
Sbjct: 75 acatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgac 134
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 135 ttatattgtgaaac 148
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 148 gtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||||||||||||| | |||| || ||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 178 bits (90), Expect = 1e-44
Identities = 105/110 (95%)
Strand = Plus / Plus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatct 72
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 73 atttagattcattaaaatcaatatgaatgtgagaaatgttagaataactt 122
||||||||||||||| ||||||||||||||| |||||| |||||| ||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 131 bits (66), Expect = 3e-30
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatct 72
||||||||||| ||||||||||||||||||||||||||||||||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 73 atttagattcattaaaatcaatatgaatgtgagaaatgttagaataactt 122
| |||||||||||| ||||||||||||||| |||||| |||||| ||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 172 bits (87), Expect = 8e-43
Identities = 123/134 (91%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||| ||||| |||||||| ||||| |||||| |||||| ||
Sbjct: 75 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 132
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 133 ttacattgtgaaac 146
Score = 125 bits (63), Expect = 2e-28
Identities = 117/134 (87%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| |||||||||||| || |||||| | |||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 172 bits (87), Expect = 8e-43
Identities = 123/134 (91%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||| ||||| |||||||| ||||| |||||| |||||| ||
Sbjct: 86 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 125 bits (63), Expect = 2e-28
Identities = 117/134 (87%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 72
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| |||||||||||| || |||||| | |||| ||
Sbjct: 73 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 132
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 133 ttacattgtgaaac 146
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 170 bits (86), Expect = 3e-42
Identities = 123/134 (91%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||| ||||| ||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 87 atatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
|||||||| |||||
Sbjct: 28 ttacattgcgaaac 15
Score = 139 bits (70), Expect = 1e-32
Identities = 119/134 (88%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 15 gtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | | |||| ||| |||||||||||| || ||||| ||| || ||||||||||||| ||
Sbjct: 75 ataga-atatatatctagattcattaacattaatataaatatgggaaatgttagaatgac 133
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 134 ttacattgtgaaac 147
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 3e-42
Identities = 122/134 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| | |||||||||||| |||||| || ||| ||
Sbjct: 88 acatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| || |||||||||||| |||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 168 bits (85), Expect = 1e-41
Identities = 125/138 (90%), Gaps = 4/138 (2%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 152 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 93
Query: 61 acatatatatctatttagattcattaaaatca----atatgaatgtgagaaatgttagaa 116
|||||||||||||| |||||||||||| |||| ||||||| || |||||| |||||
Sbjct: 92 acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaa 33
Query: 117 taacttacattgtgaaac 134
| ||||||||||||||||
Sbjct: 32 tgacttacattgtgaaac 15
Score = 129 bits (65), Expect = 1e-29
Identities = 120/138 (86%), Gaps = 4/138 (2%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat----tgatgttaatgaat 56
||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgttaatgaat 74
Query: 57 ctagacatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||| | |||||| | | |||||||||||| |||| |||||||||| |||||| |||||
Sbjct: 75 ctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaa 134
Query: 117 taacttacattgtgaaac 134
| ||||||||||||||||
Sbjct: 135 tgacttacattgtgaaac 152
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| ||| |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 ataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 135 ttatattgtgaaac 148
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||||| ||| |||||||||||| || |||||||||||| ||| |||||||| ||
Sbjct: 88 atatatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || |||||||||||| ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||||||||| |||||||||||| |||||||||||||| |||||| |||||| ||
Sbjct: 88 aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| |||||||| |||||| ||||| || ||| ||
Sbjct: 75 atagatatatatttctagattcattaccatcaatattaatgtgggaaattctaaaatgac 134
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 135 ttagattgtgaaac 148
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| || || ||| ||||| || |||||||||||| ||||| || ||| ||
Sbjct: 88 acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 131 bits (66), Expect = 3e-30
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||| ||||||||||||| || ||||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||| | | |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 ctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||||| | |||||||||||| ||| |||||||| || | |||| |||||| ||
Sbjct: 88 acatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| | | |||||||||||| || ||||||||||||||||||| |||||| ||
Sbjct: 75 ttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||| ||||||||||| || |||||| ||||||||||| |||||||||||||||||
Sbjct: 15 gtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| ||||| ||||||||||||| || ||| ||||||||||| |||||| |||||| ||
Sbjct: 75 acatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||||||| | | |||||||||||| ||| |||||||||||||||||| || ||| ||
Sbjct: 88 atatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgac 29
Query: 121 ttacattgtgaaac 134
||||| ||||||||
Sbjct: 28 ttacaatgtgaaac 15
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 7e-40
Identities = 121/134 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||| | || ||||||||||||||||||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatatag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| ||||||||| |||||||||||| |||||||||||| | |||||| |||||| ||
Sbjct: 88 acatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 131 bits (66), Expect = 3e-30
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||||| | | || ||||||||| ||||||||||||| | | ||| |||||| ||
Sbjct: 75 atagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 115/127 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| ||||| ||| |||||||||||| | | ||||||||||| ||||||||||||| ||
Sbjct: 88 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 29
Query: 121 ttacatt 127
|||||||
Sbjct: 28 ttacatt 22
Score = 141 bits (71), Expect = 3e-33
Identities = 113/127 (88%)
Strand = Plus / Plus
Query: 8 aatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacatata 67
||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 68 tatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacatt 127
|| | | |||||||||||| | | ||||||||||| ||||| |||||| |||||||||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 128 gtgaaac 134
|||||||
Sbjct: 142 gtgaaac 148
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||||| ||||| |||||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||||| | |||||||||||| || | |||||||||| |||||| |||||| ||
Sbjct: 88 acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||| | || |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||||| | | ||||||||||| ||||||||| |||||||||||| || ||| ||
Sbjct: 75 acggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||| | | ||||||||||||| ||||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||| ||||||| ||||||| ||||||| ||||| |||||| ||
Sbjct: 88 acatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| |||||||||||| | ||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 135 ttatattgtgaaac 148
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 155 bits (78), Expect = 2e-37
Identities = 119/134 (88%), Gaps = 9/134 (6%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| | |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 acat---------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 125
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 126 ttacattgtgaaac 139
Score = 145 bits (73), Expect = 2e-34
Identities = 119/134 (88%), Gaps = 9/134 (6%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| || || |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 79 a-----atgtc----tagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 3e-36
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| | | | |||||||| | ||||||||||||||||| ||| |||||| ||
Sbjct: 88 acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 143 bits (72), Expect = 7e-34
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||| || |||||||||||||| | |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||| |||| | | |||||||||| | |||||||||||||||||||||| |||||| ||
Sbjct: 75 acatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 149 bits (75), Expect = 1e-35
Identities = 120/134 (89%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||||||| || |||||||||||||||||||| |
Sbjct: 146 gtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctgg 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||| |||| |||||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 86 ac--atatgcctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 125 bits (63), Expect = 2e-28
Identities = 117/134 (87%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| || | | ||||||||||| |||||||| || ||| |||||| |||||| ||
Sbjct: 75 --ataggcatatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgac 132
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 133 ttatattgtgaaac 146
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 149 bits (75), Expect = 1e-35
Identities = 114/126 (90%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
||||| | | |||||||||||| ||||||||||||||| |||||| |||||| ||||||
Sbjct: 79 atata--tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 136
Query: 125 attgtg 130
||||||
Sbjct: 137 attgtg 142
Score = 149 bits (75), Expect = 1e-35
Identities = 114/126 (90%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 83
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
||||| | | || ||||||||| |||||||||||||| ||||| |||||| ||||||
Sbjct: 82 atata--tgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttac 25
Query: 125 attgtg 130
||||||
Sbjct: 24 attgtg 19
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||| ||||||| ||||| |||||| ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatataagccattctagcatttttcacatttatattgatgataatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||||||| || |||||||||||| |||||| || ||| ||
Sbjct: 88 acatatatatctatctagattcattaacataaatatgaatgtgggaaatgctacaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
Score = 131 bits (66), Expect = 3e-30
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| |||||||| ||||||| ||||| |||||| |
Sbjct: 75 atagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggc 134
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 135 ttatattgtgaaac 148
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 4e-35
Identities = 119/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||| |||||||||| | ||||||||||||| ||||||||||| ||||||||||
Sbjct: 15 gtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| ||||| |||||||||||| |||||||| |||||| |||||| || ||| ||
Sbjct: 75 acatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaaatgac 134
Query: 121 ttacattgtgaaac 134
|||| |||||||||
Sbjct: 135 ttactttgtgaaac 148
Score = 115 bits (58), Expect = 2e-25
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 148 gtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | | |||| | | ||||||||| || |||||||| |||||| |||||| | ||| ||
Sbjct: 88 atagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgac 29
Query: 121 ttacattgtgaaac 134
|||| |||||||||
Sbjct: 28 ttactttgtgaaac 15
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 7e-34
Identities = 90/96 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatat 96
|||||||||||||| |||||||||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatat 53
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||| | | ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| ||||||||||||||| ||||| |||||| |
Sbjct: 75 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 141 bits (71), Expect = 3e-33
Identities = 119/134 (88%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct: 15 gtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||| ||| |||||||||||| || | ||||||||||| ||||| |||||| ||
Sbjct: 75 acatatata--tatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgac 132
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 133 ttacattgtgaaac 146
Score = 109 bits (55), Expect = 1e-23
Identities = 115/134 (85%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||||| | ||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| | | || ||||||||| || | |||||||||| |||||| ||||| ||
Sbjct: 86 --atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 3e-33
Identities = 118/134 (88%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||| | |||||||||| | ||||||||||||||| |||||| |||||| ||
Sbjct: 75 ac------atctgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgac 128
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 129 ttacattatgaaac 142
Score = 133 bits (67), Expect = 7e-31
Identities = 117/134 (87%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 142 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | | | |||||||||| | ||||||||||||||| |||||| |||||| ||
Sbjct: 82 acaga------tgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 141 bits (71), Expect = 3e-33
Identities = 118/134 (88%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||
Sbjct: 142 gtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctag 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| | |||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 82 acatatatct------agattcattagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 131 bits (66), Expect = 3e-30
Identities = 118/134 (88%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| || ||||||||||| |||||||||||||| |||||| |||||| ||
Sbjct: 75 --atatatgtc----tagattcattagcatcaatatgaatgtaggaaatgctagaatgac 128
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 129 ttatattgtgaaac 142
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 141 bits (71), Expect = 3e-33
Identities = 117/134 (87%), Gaps = 10/134 (7%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| ||||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 acatatat----------attcattaacatcaatatgaatgtgggaaatgctagaatgac 124
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 125 ttacattgtgaaac 138
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%), Gaps = 10/134 (7%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 138 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat---- 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| || |||||||||||| || ||||| |||||| |||||| |||||| ||
Sbjct: 82 --atatatgtc----tagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||||||||||||||| || |||| |||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| |||||||| ||| || |||||||| | |||||| |||||| ||
Sbjct: 88 acatatatatctatatagattcactaacctctatatgaatataggaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||||| | |||||||| || |||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatctat 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||| ||| || ||||||||||| |||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||| |||||||||||| |||| |||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| ||||||||||| ||||||||| |||||| ||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 91.7 bits (46), Expect = 2e-18
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||| ||| ||||||||||| ||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||| ||||||||| |||| |||||||||||| |||| ||||||||||||
Sbjct: 15 gtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||| | |||||||||||| ||||||||||||||| ||||| |||||| ||
Sbjct: 75 gcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||||||| | ||||||||||| ||| ||||||||||| |||| |||||| ||
Sbjct: 88 acttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
|||||||||||||
Sbjct: 28 atacattgtgaaac 15
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||| |||||||||||| |||| |||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| ||| ||||||||||| ||| ||||| |||||| |||| |||||| ||
Sbjct: 75 acatatatatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 91.7 bits (46), Expect = 2e-18
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| ||||| ||||| |||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||| ||| ||||||||||| ||||| |||||| ||
Sbjct: 88 ataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| || | |||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||| | || ||| |||||||||||| ||| ||||||||||||| | || |||||| ||
Sbjct: 75 acatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| || | | ||||||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||| | | | | |||||||||||| ||| |||||||| | | |||| |||||| ||
Sbjct: 88 atatatgtctatgtctagattcattaacatctatatgaatataggcaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatatata 69
|||||||||
Sbjct: 75 acatatata 83
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 127 bits (64), Expect = 4e-29
Identities = 117/134 (87%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||| | ||||||||||||||||||||||| |||| ||||||
Sbjct: 145 gtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatggatctag 86
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| ||
Sbjct: 85 ac---tatatctatctagattcattagtatcaatatgaatgtgggaaatactagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
Score = 95.6 bits (48), Expect = 1e-19
Identities = 113/134 (84%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||||| | ||||| |||| ||||||||||||||| |||||| | |||| ||
Sbjct: 75 atagatata---gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgac 131
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 132 ttacattatgaaac 145
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 117/134 (87%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||||||||||||||| | |||||||||||||| ||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| | |||||||||||| ||| |||||||||||| ||||| || ||| ||
Sbjct: 75 acatatatatgca--tagattcattaacatctatatgaatgtgaaaaatgctaaaatgac 132
Query: 121 ttacattgtgaaac 134
|| |||| ||||||
Sbjct: 133 ttgcattatgaaac 146
Score = 101 bits (51), Expect = 2e-21
Identities = 114/134 (85%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||| |||||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 146 gtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaatctat 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||| | || |||||||||| ||| | ||||||||| |||||| || ||| ||
Sbjct: 86 gcatatatatgtctt--gattcattaacatctacatgaatgtgggaaatgctaaaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 125 bits (63), Expect = 2e-28
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 61 acatata 67
|||||||
Sbjct: 75 acatata 81
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 116/134 (86%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgt------atctag 68
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||||||| || | ||||||| ||||||||||||||| ||| | |||||| ||
Sbjct: 69 acatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctagaatgac 128
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 129 ttacattgtgaaac 142
Score = 93.7 bits (47), Expect = 6e-19
Identities = 112/134 (83%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| | ||| |||||||||||||||||||||||| | |||
Sbjct: 142 gtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtttag 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||| || | | ||||| | ||||||||||||||| ||||| |||||| ||
Sbjct: 82 atagatacatatgtctagat------acatcaatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||| | | |||||||| |||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatctat 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||||| | |||| |||||||| ||| ||||||||||| ||||| |||||| ||
Sbjct: 75 acgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaatttaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| | ||||||||||| ||| |||||||| | |||||||||||| ||
Sbjct: 88 acatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| || | |||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||| | || ||| |||||||||||| ||| ||||||||||||| | || |||||| ||
Sbjct: 88 atatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| || | | ||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||| | | ||| |||||||||||| ||| |||||||| | | |||| |||||| ||
Sbjct: 75 atatatgtctatatctagattcattaacatctatatgaatataggcaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 123 bits (62), Expect = 6e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaa 74
Query: 61 acatat 66
||||||
Sbjct: 75 acatat 80
Score = 109 bits (55), Expect = 1e-23
Identities = 113/134 (84%), Gaps = 15/134 (11%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 133 gtttcacaatgtaagtcattctagcattt-------tcatattgatgttaatgaatctag 81
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| || | ||||||||||||| ||||||||||||||| ||||||||||||| ||
Sbjct: 80 atatgt--------ttagattcattaacatcaatatgaatgtgggaaatgttagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 6e-28
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||| | | |||||||||||| ||| |||||||| |||| |||| ||||| |
Sbjct: 75 acatatatatgtgtctagattcattaacatctatatgaatatgagcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| | || |||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| |||||| | | |||||||||||| ||| ||||||||||| | ||| ||||| ||
Sbjct: 88 acacatatatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 121 bits (61), Expect = 3e-27
Identities = 114/134 (85%), Gaps = 12/134 (8%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 136 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactag 77
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| |||||||||||| ||||||||||||||| ||||| |||||| ||
Sbjct: 76 aca------------tagattcattaacatcaatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 105 bits (53), Expect = 1e-22
Identities = 112/134 (83%), Gaps = 12/134 (8%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta- 73
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||| |||||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 74 -----------tgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgac 122
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 123 ttacattgtgaaac 136
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctag 74
Query: 61 acatatatatctatttagatt 81
|||||||||||||| ||||||
Sbjct: 75 acatatatatctatctagatt 95
Score = 83.8 bits (42), Expect = 5e-16
Identities = 109/134 (81%), Gaps = 13/134 (9%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||| |||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 135 gttttacaatgtaagtcattctagcatttcccacattcata-------------atctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | |||||||||||| |||||||||||| ||||||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 67
Query: 61 a 61
|
Sbjct: 66 a 66
Score = 103 bits (52), Expect = 6e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 67 atatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacat 126
|||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 127 tgtgaaac 134
||||||||
Sbjct: 119 tgtgaaac 126
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 87/96 (90%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
|||||| ||||||||||||||||||| || ||||||||||||| ||||||||||| ||||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatctaaacat 85
Query: 65 atatatctatttagattcattaaaatcaatatgaat 100
|||||||||| || |||||||| ||||||||||||
Sbjct: 84 atatatctatctaaattcattagcatcaatatgaat 49
Score = 117 bits (59), Expect = 4e-26
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 12 taagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatc 71
|||||||||||| |||| ||| ||||||||||||| |||||||| |||| | ||||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaatttagatagatatata 85
Query: 72 tatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtg 130
| ||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||
Sbjct: 86 tgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtg 144
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 117 bits (59), Expect = 4e-26
Identities = 115/134 (85%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||
Sbjct: 142 gtttcacaatgtaagtcattctagcattttccatattcatattgatgt------atctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||||||| || | ||||||| ||| ||||||||||| ||||| |||||| ||
Sbjct: 88 acatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 85.7 bits (43), Expect = 1e-16
Identities = 111/134 (82%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| | |||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||| || | | ||||| | |||||||||||| || ||||| |||||| ||
Sbjct: 75 atagatacatatgtctagat------acatcaatatgaatatggaaaatgctagaatgac 128
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 129 ttacattgtgaaac 142
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 117 bits (59), Expect = 4e-26
Identities = 86/94 (91%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||
Sbjct: 139 gtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctag 80
Query: 61 acatatatatctatttagattcattaaaatcaat 94
|||| |||||||| |||||||||||| ||||||
Sbjct: 79 acat--atatctatctagattcattaacatcaat 48
Score = 87.7 bits (44), Expect = 4e-17
Identities = 113/134 (84%), Gaps = 9/134 (6%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtc-ttctagcatttcccacatt------gatgttaatgaatctag 67
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||| | | ||||||||||| |||||||||||| || |||||| || ||| ||
Sbjct: 68 atagatatatgtct--agattcattaacatcaatatgaatatgggaaatgctaaaatgac 125
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 126 ttatattgtgaaac 139
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | || | ||| || ||||||||| ||| ||||| ||||| | |||| |||||| ||
Sbjct: 88 acacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| ||||||| ||||| ||||||||||||| |||
Sbjct: 15 gtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||| || | | | |||||||||||| ||| |||||||| || | |||| |||||| ||
Sbjct: 75 atatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || ||||||| |||||||||| || |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||| | | | |||||||||||| ||| ||||||||||||| |||| ||| | |
Sbjct: 88 atatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtc 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | | ||| |||| | ||||||||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | |||| ||| |||||||||||| ||| || |||||||| | ||||||| || |
Sbjct: 75 acacacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 113 bits (57), Expect = 6e-25
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatctag 66
Query: 61 a 61
|
Sbjct: 65 a 65
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaac 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 50
|||||||||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 113 bits (57), Expect = 6e-25
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 17 cattctaacatttcccacattcatattgatgttaatgaatctagacatatatatctattt 76
||||||| ||||| |||||||||||| | ||||||||||||||||||| ||||| ||| |
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaat 117
||||||||||| | | ||||||||||| |||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaat 101
Score = 97.6 bits (49), Expect = 4e-20
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 17 cattctaacatttcccacattcatattgatgttaatgaatctagacatatatatctattt 76
|||||||||||||||||||||||||| | |||||||||||||||| ||||||| | | |
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaat 117
||||||||||| | | ||||||||||| ||||| ||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaat 2
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 113 bits (57), Expect = 6e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 125 gtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctag 66
Query: 61 acatatata 69
|||||||||
Sbjct: 65 acatatata 57
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| || |||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
|||||||||||| |||||| |||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 111 bits (56), Expect = 2e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 119 gtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctag 60
Query: 61 acatatat 68
||||||||
Sbjct: 59 acatatat 52
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| |||||| ||||||||||||||| |||||| |||||| ||||||||| ||||||
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 119
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 70
Query: 61 aca 63
|||
Sbjct: 69 aca 67
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||||||| || |||||| |||||| ||||||||||||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaac 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcat 40
|||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 74
Query: 61 aca 63
|||
Sbjct: 75 aca 77
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 49
|||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 125 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| ||||||||| ||||||
Sbjct: 80 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 125
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Query: 61 aca 63
|||
Sbjct: 75 aca 77
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||||||| || |||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaac 15
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcat 40
|||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 129 gtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
|||||||||| ||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 11 gtttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 83 attaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| ||||||||||||||| ||||| || ||| ||||| ||||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 129 gtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatctag 70
Query: 61 acatata 67
|||||||
Sbjct: 69 acatata 63
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||||||||| ||||| ||| ||||||
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaac 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 50
|||||| |||||||||||||||| ||||| |||||| || |||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 4e-23
Identities = 112/134 (83%), Gaps = 13/134 (9%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 135 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctag 76
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||||| ||||| |||||||| ||||||||||||| |||||| ||
Sbjct: 75 ac-------------tagatttattaacatcaatataaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 83.8 bits (42), Expect = 5e-16
Identities = 109/134 (81%), Gaps = 13/134 (9%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||| |||||| |||||||||||||| |||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| |||||||||||| |||||||||||| || ||||| |||||| ||
Sbjct: 75 -------------tctagattcattaacatcaatatgaatatggaaaatgctagaatgac 121
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 122 ttacattgtgaaac 135
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 107 bits (54), Expect = 4e-23
Identities = 115/137 (83%), Gaps = 15/137 (10%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta- 59
|||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatctat 74
Query: 60 --gacatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaat 117
|||| ||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 75 gtgaca------------tagtttcattaacatcaatatgaatgtgagaaatgctagaat 122
Query: 118 aacttacattgtgaaac 134
||||||||||||||||
Sbjct: 123 gacttacattgtgaaac 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/134 (84%), Gaps = 9/134 (6%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |
Sbjct: 139 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaaac--- 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| || | |||||||||||| ||||||||||||||| ||||| |||||| ||
Sbjct: 82 -----tatgtc-acatagattcattaacatcaatatgaatgtggaaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| || |||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | || | ||| || ||||||||| ||| |||| ||||| | |||| |||||| ||
Sbjct: 75 acacacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||| ||||||| |||| ||||||||||||| |||
Sbjct: 148 gtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatttag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||| || | | | |||||||||||| ||| |||||||||| | |||| |||||| ||
Sbjct: 88 atatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||||||| || ||||| |||||||| | ||||||| |||||||||
Sbjct: 148 gtttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||||| || ||||||||| ||| ||| |||| ||| ||||||||| |||||| ||
Sbjct: 88 acatatatacatacttagattcactaacatctatatcaatatgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
Score = 75.8 bits (38), Expect = 1e-13
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||| || ||| |||| ||||||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatctaa 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||||| | | |||||||| ||| ||| | ||||||||| ||||| || ||| ||
Sbjct: 75 gtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| |||| |||||| | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||| |||||||||||||||| ||| ||||| | ||| | ||| ||||| |
Sbjct: 75 acatatgtatgtatttagattcattaacatccatatgtacgtgggcaatactagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 67.9 bits (34), Expect = 3e-11
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| ||| ||||| | ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||| || | | |||||||||||| ||| | |||||| || | |||| ||||| |
Sbjct: 88 atacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatg 110
| |||||| | | | |||||||||||| ||| ||||||||||||| ||||
Sbjct: 88 aaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Score = 91.7 bits (46), Expect = 2e-18
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | || || |||| | ||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | |||| | | |||||||||||| ||| ||||||||||| | |||| ||||| |
Sbjct: 75 acacacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatg 110
| |||||| | | | |||||||||||| ||| ||||||||||||| ||||
Sbjct: 75 aaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Score = 91.7 bits (46), Expect = 2e-18
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | || || |||| | ||||||||||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| | |||| | | |||||||||||| ||| ||||||||||| | |||| ||||| |
Sbjct: 88 acacacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatctat 71
Query: 61 acatat 66
||||||
Sbjct: 70 acatat 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 130
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 105 bits (53), Expect = 1e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 57
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 57
|||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 131 gtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 112/134 (83%), Gaps = 12/134 (8%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| ||| |||||||| ||||||||||||
Sbjct: 136 gtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatctac 77
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 76 a------------tctagattcattaacatcaatatgaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 105 bits (53), Expect = 1e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 109/130 (83%), Gaps = 12/130 (9%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||||| |||||| ||||||||||||||| |||||| |||||| ||
Sbjct: 75 ------------atatagatacattaacatcaatatgaatgtgggaaatgctagaatgac 122
Query: 121 ttacattgtg 130
||||||||||
Sbjct: 123 ttacattgtg 132
Score = 105 bits (53), Expect = 1e-22
Identities = 109/130 (83%), Gaps = 12/130 (9%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatcta----- 78
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
||| ||||| |||||| ||||||||||||||| ||||| |||||| ||||||
Sbjct: 77 -------tatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttac 25
Query: 125 attgtgaaac 134
||||||||||
Sbjct: 24 attgtgaaac 15
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 1e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 97.6 bits (49), Expect = 4e-20
Identities = 111/134 (82%), Gaps = 12/134 (8%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||| ||| ||| |||||||| ||||||||||||
Sbjct: 136 gtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatctac 77
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | |||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 76 a------------tctagattcattaacatcaatatgaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 105 bits (53), Expect = 1e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacatt 37
|||||| |||| |||||||||||||||||||||||||
Sbjct: 124 gtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 1e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 130 gtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 71
Query: 61 a 61
|
Sbjct: 70 a 70
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 103 bits (52), Expect = 6e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 120 gtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctag 61
Query: 61 acatatat 68
| ||||||
Sbjct: 60 atatatat 53
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 67 atatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacat 126
|||| ||| |||||||||||| ||||||||||||||| |||||||||| | ||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 127 tgtgaaac 134
|||||||
Sbjct: 113 ggtgaaac 120
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||||||
Sbjct: 128 gtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatctag 69
Query: 61 acatata 67
|||||||
Sbjct: 68 acatata 62
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| | || ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 128
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatcta 73
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 114 gtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 88 aatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 68 aatctatatgaatgtgggaaatgctagaatgacttacattgtgaaac 114
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct: 134 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatctag 75
Query: 61 aca 63
|||
Sbjct: 74 aca 72
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaat 70
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| | |||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
|||||||| | | |||||||||||||| ||| |||||||||||
Sbjct: 75 acatatatgtgtgtttagattcattaacatctatatgaatgtg 117
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 31 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaaaat 90
|||||||||||| |||||||||||||||| ||| | |||| | | |||||||||||| ||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 91 caatatgaatgt 102
| ||||||||||
Sbjct: 58 ctatatgaatgt 47
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 101 bits (51), Expect = 2e-21
Identities = 114/134 (85%), Gaps = 7/134 (5%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 15 gtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaaact-- 72
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| ||| || || |||||||| |||||||| |||||| ||||| |||||| ||
Sbjct: 73 acatctat-----ttaagtttcattaacatcaatataaatgtgggaaatactagaatgac 127
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 128 ttacattgtgaaac 141
Score = 95.6 bits (48), Expect = 1e-19
Identities = 112/134 (83%), Gaps = 7/134 (5%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 141 gtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaaact-- 84
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| || || ||| |||||||| ||||||||||||||| ||||| |||||| ||
Sbjct: 83 -----taaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| |||| |||||| | |||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||| | |||||||||||||| || ||||| ||||| | |||| ||||| |
Sbjct: 88 acatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 75.8 bits (38), Expect = 1e-13
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||| ||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaatctaa 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| ||| || | | ||||||||||| ||| | |||||| || | |||| ||||| |
Sbjct: 75 acacatacatatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 9e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatctat 71
Query: 61 acatat 66
||||||
Sbjct: 70 acatat 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaac 130
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 9e-21
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatct 58
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct 72
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 127 gtttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| | || |||| || ||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||| | || | ||||||||||||| ||| ||||||||||| | |||| || ||| ||
Sbjct: 75 atatagacatatgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgac 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||||||| || |||| ||||||||||||| |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| | | ||| |||||||||||| ||| ||||| || || | || | |||||| ||
Sbjct: 88 acatatgtctatatctagattcattaacatctatatgcatatgggtaaggctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||||||| | | |||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| | ||| |||||||||||||||| ||| ||||| || || |||| ||||| |
Sbjct: 75 acatgtgtatatatttagattcattaacatctatatgtatatggacaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 67.9 bits (34), Expect = 3e-11
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||| || ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||||| | | | |||||||||||| | | | ||||||||| | |||| ||||| |
Sbjct: 88 atatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || |||| |||| |||||| | |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||| | |||||||||||||| || ||||| || |||| |||| ||||| |
Sbjct: 88 acatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| | || || ||||| || |||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaatctaa 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| ||| || | | |||||||||||| ||| | |||||| || | |||| || || |
Sbjct: 75 acacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 99.6 bits (50), Expect = 9e-21
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||||||| || |||| ||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| ||||| ||| |||||||||||| ||| ||||||||| | | |||| ||||| |
Sbjct: 75 acacatataagtatatagattcattaacatctatatgaatgcgggcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 75.8 bits (38), Expect = 1e-13
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||| ||||||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatctat 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||||| | | ||||||||||| ||| || |||||||| | |||| ||||| |
Sbjct: 88 atacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 28 ttacattatgaaac 15
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 99.6 bits (50), Expect = 9e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 105 gtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatctag 46
Query: 61 acatat 66
| ||||
Sbjct: 45 atatat 40
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||||| |||||| ||||||||| ||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattcta 23
|||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatgtag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 113 gtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatctag 54
Query: 61 a 61
|
Sbjct: 53 a 53
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||||||||| |||||| |||||| ||||||||| ||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaac 113
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacattt 29
||||||||||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaga 61
||||| |||||||||||||||| |||| | ||||||||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 62 catatatat 70
|||||||||
Sbjct: 61 catatatat 53
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
|||||||||||| ||| ||||||||||| | |||| |||||| ||||||||| |||||
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||| |||||||||||||||| |||| || | ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 57
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Score = 89.7 bits (45), Expect = 9e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 57
|||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 128 gtttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 72
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 78 gattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 81.8 bits (41), Expect = 2e-15
Identities = 106/130 (81%), Gaps = 12/130 (9%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
|||||| |||||||||||| ||||| | | ||||||||||||||||||||||||||
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctag---- 77
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
|| |||||||||||| ||||||||||||||| |||||| || ||| ||||||
Sbjct: 76 --------atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttac 25
Query: 125 attgtgaaac 134
||| ||||||
Sbjct: 24 attatgaaac 15
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 136 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 77
Query: 61 a 61
|
Sbjct: 76 a 76
Score = 81.8 bits (41), Expect = 2e-15
Identities = 106/130 (81%), Gaps = 12/130 (9%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
|||||| |||||||||||| ||||| | | ||||||||||||||||||||||||||
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctag---- 74
Query: 65 atatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttac 124
|| |||||||||||| ||||||||||||||| |||||| || ||| ||||||
Sbjct: 75 --------atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttac 126
Query: 125 attgtgaaac 134
||| ||||||
Sbjct: 127 attatgaaac 136
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc 57
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 124 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc 68
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 78 gattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| ||||||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| | ||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 97.6 bits (49), Expect = 4e-20
Identities = 110/134 (82%), Gaps = 16/134 (11%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||| |||||||||||||| |||| ||
Sbjct: 132 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatggat---- 77
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| |||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 76 ------------atctagattcattaatatcaatatgaatgtgagaaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 117 gtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatctag 58
Query: 61 a 61
|
Sbjct: 57 a 57
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 71 ctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtg 130
|||| |||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 131 aaac 134
||||
Sbjct: 114 aaac 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttc 30
||||||||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 105 gaaatgttagaataacttacattgtgaaac 134
|||||| |||||| ||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| ||||||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcat-tctaacatttcccacattcatattgatgttaatg 53
||||||||||||||||||| | || ||||||||||||||||||||||| |||||
Sbjct: 133 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 80
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 95.6 bits (48), Expect = 1e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 104 gtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcat 40
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaac 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 95 atgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 133 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| ||||||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcat-tctaacatttcccacattcatattgatgttaatg 53
||||||||||||||||||| | || ||||||||||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 68
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatctag 61
Query: 61 acatatat 68
||||||||
Sbjct: 60 acatatat 53
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaac 15
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||||||||||||| |||||| |||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatctaa 63
Query: 61 acat 64
||||
Sbjct: 62 acat 59
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 49
||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 74 tttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
|||||||||||||| ||||||||||||||| || ||| |||||| ||||| |||||||||
Sbjct: 62 tttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaa 121
Query: 134 c 134
|
Sbjct: 122 c 122
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatctag 74
Query: 61 acatatat 68
||| ||||
Sbjct: 75 acaaatat 82
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa 119
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatatt 43
||||| |||||||||||||||| |||||| ||||||||||||
Sbjct: 119 tttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 61 acatata 67
|||||||
Sbjct: 75 acatata 81
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| ||||||||||| | |||| ||||| ||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaac 15
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 6e-19
Identities = 97/116 (83%), Gaps = 12/116 (10%)
Strand = Plus / Minus
Query: 12 taagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatc 71
|||||||||||| |||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatat----- 50
Query: 72 tatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacatt 127
|||||||| |||||||||||||||||||||| |||||| |||||||||
Sbjct: 49 -------attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 96/116 (82%), Gaps = 12/116 (10%)
Strand = Plus / Plus
Query: 8 aatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacatata 67
|||||||||||||||| |||||| |||||||||||||||| |||||| |||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatga--------atata 52
Query: 68 tatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataactta 123
| || ||||||||||| |||||||||||||||||||||| |||||| |||||
Sbjct: 53 tgtc----tagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 6e-19
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||||||| | ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatctaa 74
Query: 61 acatatatatctatttagattcattaa 87
|||||| ||| | ||||||||||||||
Sbjct: 75 acatatgtatgtgtttagattcattaa 101
Score = 67.9 bits (34), Expect = 3e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 45 atgttaatgaatctagacatatatatctatttagattcattaaaatcaatatgaatgtga 104
||||||||||||||| ||| ||| || | |||||||||||||| ||| | |||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 105 gaaatgttagaataacttacattgtgaaac 134
| |||| ||||| |||||||||||||||
Sbjct: 44 gtaatgctagaaagtcttacattgtgaaac 15
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 93.7 bits (47), Expect = 6e-19
Identities = 112/134 (83%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||| ||||||| ||||||||| ||||||||||||
Sbjct: 142 gtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctag 83
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||| ||| || |||||||| |||||| | ||||||||||||| || ||| ||
Sbjct: 82 agata------tatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgac 29
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 28 ttacattgtgaaac 15
Score = 75.8 bits (38), Expect = 1e-13
Identities = 111/134 (82%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||||| |||||| | ||||||| |||||||| |||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||| | ||||||||||| |||||||| |||||| ||||| || ||| ||
Sbjct: 75 ----atatatc--tctagattcattagcatcaatataaatgtggaaaatgctaaaatgac 128
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 129 ttatattgtgaaac 142
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | |||||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
|||| ||| ||| |||||| |||| ||| |||||||||||
Sbjct: 88 acattattatatatatagatttattagcatctatatgaatgtg 46
Score = 67.9 bits (34), Expect = 3e-11
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | || || |||| ||||||||||||| |||| |||| ||||||
Sbjct: 15 gtttcataatgtaagactttatagcattacccacattcatatagatgctaataaatctat 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| ||||| | | ||||||||||| ||| ||||||||||| | |||||||||| |
Sbjct: 75 atatataataatgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 93.7 bits (47), Expect = 6e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 55
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 80 ttcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| ||||||||||||||| |||||| |||||| |||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaac 15
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 93.7 bits (47), Expect = 6e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 137 gtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctag 78
Query: 61 aca 63
|||
Sbjct: 77 aca 75
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaac 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
|||||||||||||||||||| || |||| |||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagtatttgtcacatttatattgatgttaat 66
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||| |||||||||| | || ||| ||| || |||||||| | ||||||||||||| |||
Sbjct: 15 gttttacaatgtaagactttttaatattgcctacattcatttagatgttaatgaatatag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| || | |||||||||||||| ||| ||||| ||||||| |||| ||||| |
Sbjct: 75 acatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
||||||||||||||| | ||||| |||| | ||||| ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaatcta 90
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 91.7 bits (46), Expect = 2e-18
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcat-tctaacatttcccacattcatattgatgttaatgaatcta 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcccctctaacatttcccacattcatattgatgttaatgaatcta 74
Query: 60 ga 61
||
Sbjct: 75 ga 76
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 127 gtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 67 atatctatttagattcattaaaatcaatatgaatgtgagaaatgttaga 115
|||||||| |||||||||||| ||||||||||||||| |||||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| || |||||| |||||| ||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaac 127
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||
Sbjct: 134 gtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaatctag 75
Query: 61 acatatatat 70
| ||||||||
Sbjct: 74 atatatatat 65
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
|||||| |||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttttcacattcatagtgatgttaat 66
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| ||||||||||||| ||||||||||||||||| || |||||| ||| |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||||||| || ||||||||||| | |||| |||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| ||||||||||||| ||||||||||||||||| |||||||| | |||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaa 51
||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 65
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 81 tcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 84 ttaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||| ||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctag 63
Query: 61 a 61
|
Sbjct: 62 a 62
Score = 83.8 bits (42), Expect = 5e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| || |||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 122
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
|||||||||| ||||||||||||| |||| ||||||||||||||||||||| | |||||
Sbjct: 33 ttctaacattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttag 92
Query: 79 attcattaaaatcaatatgaa 99
||||||| | ||| |||||||
Sbjct: 93 attcattgacatctatatgaa 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 36 ttcatattgatgttaatgaatctagacatatatatctatttagattcattaaaatcaata 95
||||||| ||||| |||||||||| ||| |||||| | | |||||||||| | || |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 96 tgaatgtgagaaatgttagaa 116
|||||||| | ||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaa 33
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctagacatatatatct 72
||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 73 a 73
|
Sbjct: 63 a 63
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatctaga 61
||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 83.8 bits (42), Expect = 5e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| || |||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||| |||||||| || ||||||||| |||||||||||||||||| |||||||
Sbjct: 126 gtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctag 67
Query: 61 acatatata 69
|||| ||||
Sbjct: 66 acatttata 58
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattca 39
|||||||||||||||| |||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagtatttcccacattca 53
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 96 tgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| ||||| |||||||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| ||||| |||||||||||| || |||||| || ||| |||| |||||||||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaac 126
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||| ||| | ||||||||| |||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatg 101
||||||| || | |||||||||||||| ||| | |||||||
Sbjct: 88 acatatacatatgtttagattcattaacatctaaatgaatg 48
Score = 60.0 bits (30), Expect = 8e-09
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || ||| || ||||||| | ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttatagtattacctccattcatttagatgttaatgaatctaa 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||| ||| | | |||||| ||||| ||| | ||| ||||| | |||| ||||| |
Sbjct: 75 acatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaat 52
|||||||||| |||||||||||| |||||| ||||||||||||||||||||
Sbjct: 128 gtttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||||||| | ||||| |||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaac 15
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 83 attaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| |||||||||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaac 128
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || ||| |||||||||||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaat 100
|||||| ||| ||| ||| |||||||| ||| ||||||||
Sbjct: 88 acatatgtatatatctaggttcattaacatctatatgaat 49
Score = 69.9 bits (35), Expect = 8e-12
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||| | ||||| ||| |||| |||||||| |||||||||||| ||||
Sbjct: 15 gtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
| ||||| || | | |||||||||||| ||| |||||||||||
Sbjct: 75 atatatacatatgtctagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||
Sbjct: 116 gtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaac 116
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||| ||| |||||| |||||| ||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctag 89
Query: 61 acatatat 68
||||||||
Sbjct: 88 acatatat 81
Score = 75.8 bits (38), Expect = 1e-13
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| | | |||| |||||||| ||||||||||||| |||
Sbjct: 15 gtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| |||| | | |||||||||||| ||| ||||||||||| | ||| ||||| |
Sbjct: 75 acacgcatatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||||||||| || ||||| |||||| ||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaac 15
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||| |||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 119 gtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| || ||||| |||||| ||||||||| ||||||
Sbjct: 74 atcaatatgaatatggaaaatgctagaatgacttacattatgaaac 119
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 87.7 bits (44), Expect = 4e-17
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 25 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 84
|||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 87 catttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcat 31
Query: 85 taaaatcaatatgaatgtgagaaatg 110
||| ||||||||||| ||| ||||||
Sbjct: 30 taatatcaatatgaacgtgggaaatg 5
Score = 79.8 bits (40), Expect = 9e-15
Identities = 75/86 (87%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 25 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 84
|||||||||| ||||||||||| |||||||||||||| | ||||| || |||||||||
Sbjct: 5 catttcccacgttcatattgatattaatgaatctagatagatata---atctagattcat 61
Query: 85 taaaatcaatatgaatgtgagaaatg 110
||| ||||||||||| ||| ||||||
Sbjct: 62 taatatcaatatgaacgtgggaaatg 87
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| || ||||| |||||| ||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaac 120
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || ||| |||||||||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaat 100
|||||| ||| ||| ||| |||||||| ||| ||||||||
Sbjct: 75 acatatgtatatatctaggttcattaacatctatatgaat 114
Score = 69.9 bits (35), Expect = 8e-12
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||| | ||||| ||| |||| |||||||| |||||||||||| ||||
Sbjct: 148 gtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
| ||||| || | | |||||||||||| ||| |||||||||||
Sbjct: 88 atatatacatatgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | |||||||||| || | | | || |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctaacattgcctatgtacccatagatgttaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||||| | |||||||||||||| ||| | ||||||||| | |||| |||||
Sbjct: 88 acatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatgctagaa 33
Score = 69.9 bits (35), Expect = 8e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||| ||| | ||||| |||| ||||||||||| | ||||||||||||||||
Sbjct: 15 gtttcataatgcaagactttctagcattacccacattcatttagatgttaatgaatctaa 74
Query: 61 acatatatatctatttagattcattaa 87
||| |||||| | | ||||||||||||
Sbjct: 75 acacatatatatgtctagattcattaa 101
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||||||||||| |||| ||||||||||||| ||||||||||||||| |
Sbjct: 15 gtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctgg 74
Query: 61 acatatat 68
||||||||
Sbjct: 75 acatatat 82
Score = 77.8 bits (39), Expect = 3e-14
Identities = 111/134 (82%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||| ||||||||| ||| ||| ||||||||||||
Sbjct: 146 gtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaatctag 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|| ||||| | | ||||||||||| ||| ||||||||||| | |||| |||||| ||
Sbjct: 86 ccacatata--tgtccagattcattaacatctatatgaatgtgggcaatgctagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||| ||||||
Sbjct: 28 ttatattatgaaac 15
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 8 aatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacatata 67
|||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||
Sbjct: 121 aatgtaagtcattctaacattttccacattcgtatggatgttagtgaatctagacatata 62
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 15 gtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaac 15
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacatt 127
|||||||| ||| ||| ||| ||||||| |||||||||||| |||||||||
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 32 cacattcatattgatgttaatgaatctagacatatatatctatttagattcattaaaatc 91
||||||||||| ||||| ||||||||||||||||||||| | | |||||||||||| |||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 92 aatatgaatgtg 103
|||||||||||
Sbjct: 33 tatatgaatgtg 22
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 30 cccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaaaa 89
||||||||||||| |||||||||||||||||||| |||||| | | |||||||||| | |
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 90 tcaatatgaatgtg 103
|| |||||||||||
Sbjct: 80 tctatatgaatgtg 93
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctag 74
Query: 61 acatata 67
|||||||
Sbjct: 75 acatata 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| |||||||| ||| ||||||||| || ||| ||||||||||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaac 15
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
|||||||||| ||||||||| || ||||| |||||||||||||||||
Sbjct: 129 gtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| || ||| ||||| ||||||||||
Sbjct: 84 atcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaac 129
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaac 15
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 61 aca 63
|||
Sbjct: 75 aca 77
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 35 attcatattgatgttaatgaatctagacatatatatctatttagattcattaaaatcaat 94
|||||| | ||||||||||||||||||||||| | | | | ||||||||||| ||| ||
Sbjct: 112 attcatctagatgttaatgaatctagacatatgtgtgtct--agattcattaacatctat 55
Query: 95 atgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| | |||| ||||| ||||||||| ||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttacattatgaaac 15
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 72 tatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtga 131
|||||||||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||
Sbjct: 54 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 113
Query: 132 aac 134
|||
Sbjct: 114 aac 116
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
|||||| |||||||||||||||| |||||| || |||||||||||| ||||||||||||
Sbjct: 116 gtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatcta 58
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 15 gtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| | || ||||||||||||| ||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
||| | |||| | |||||||||||| | ||| |||||||||||
Sbjct: 75 acacacatatatgtttagattcattgatatctatatgaatgtg 117
Score = 69.9 bits (35), Expect = 8e-12
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | || || |||| ||||||||||||| ||| | ||||||||||
Sbjct: 148 gtttcataatgtaagactttttagcattgcccacattcatatagatatcaatgaatctaa 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
|||||||| | | | |||||||||||| || |||||||||||
Sbjct: 88 acatatatgtgtgtctagattcattaacatatatatgaatgtg 46
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 21 ctaacatttcccacattcatattgatgttaatgaatctagacatatatat 70
||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 ctaacatttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 21 ctaacatttcccacattcatattgatgttaatgaatctagacatatatat 70
||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 80 ttcattaaaatcaatatgaatgtgagaaatgttag 114
||||||| ||||||||||||||| ||||||||||
Sbjct: 35 ttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttag 114
|||||| |||| ||||||||||||||| ||||||||||
Sbjct: 78 tagatttattagcatcaatatgaatgtgggaaatgttag 116
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatct 58
|||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 125 gtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatct 68
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 15 gtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaac 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||||||||| |||||| |||||||| |||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaac 15
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| |||||||||| | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatctag 74
Query: 61 acatatatat 70
||||||||||
Sbjct: 75 acatatatat 84
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| ||||||||||||| |||| |||||||||||||||||||||| | | |||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtatag 71
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||| ||| |||||| |||| | |||| |||||
Sbjct: 70 gttcattaacatctatatgattgtgggcaatgctagaa 33
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| |||||| |||||| |||||||||||| ||| ||| |||||| | | |||
Sbjct: 33 ttctagcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctag 92
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||| ||| ||||||||||| | |||| |||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 83.8 bits (42), Expect = 5e-16
Identities = 109/134 (81%), Gaps = 13/134 (9%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||||||||||||||||||||| |
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgat-------------g 61
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
| | ||| |||||| |||||| ||||| |||||||| ||| ||||||||| |||||| ||
Sbjct: 62 atagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgac 121
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 122 ttacattgtgaaac 135
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||||| || ||| |||||||||||||| |||||||
Sbjct: 135 gtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatctag 76
Query: 61 acatatatatctat 74
| | || |||||||
Sbjct: 75 atagatctatctat 62
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||||||||||| |||||||| ||||||||||||| ||||||||||||
Sbjct: 126 gtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatctag 67
Query: 61 ac 62
||
Sbjct: 66 ac 65
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatatgagaaatactagaattacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
|||||||||||||||| |||||| ||||| || |||||||||||||
Sbjct: 15 gtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| |||||||||||| || ||||| |||||| ||||||||| ||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaac 126
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||| || ||||||||||||| ||||||||||||
Sbjct: 122 gtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctag 63
Query: 61 acatatatat 70
||||||||||
Sbjct: 62 acatatatat 53
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| | |||||| |||||| ||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatct 58
|||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||
Sbjct: 125 gtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatct 68
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
|||||||||| |||||||||||| |||||| |||||||| |||||| |||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| |||||| |||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaac 125
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 5e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
|||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 81 tcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||| ||||||||||||||| ||||| || ||| ||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 50
|||||||||||||| | ||| || ||||| ||||||||||||||||||||
Sbjct: 118 gtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 73 atcaatatgaatgtggaaaatgctaaaataaattacattgtgaaac 118
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||||||||| ||||||||| |||||||
Sbjct: 124 gtttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatctag 65
Query: 61 acatat 66
||||||
Sbjct: 64 acatat 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| ||||| ||| ||||||||||| | |||| ||||| |||||||||||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaac 124
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 66 tatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttaca 125
||||||||| |||||||||||| |||||||| | |||| ||||| ||||||||||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 126 ttgtgaaac 134
|||||||||
Sbjct: 23 ttgtgaaac 15
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
|||||||||||||||| |||||| ||||| ||||| | |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 81.8 bits (41), Expect = 2e-15
Identities = 72/82 (87%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 22 taacatttcccacattcatattgatgttaatgaatctagacatatatatctatttagatt 81
||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctagacatatatatc----tagatt 57
Query: 82 cattaaaatcaatatgaatgtg 103
|||||| || |||||||||||
Sbjct: 58 cattaacatatatatgaatgtg 79
Score = 63.9 bits (32), Expect = 5e-10
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 25 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 84
|||| ||||||||||||| ||||||||||||||||| |||||| || |||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagatatatatgtc----tagattcat 31
Query: 85 taaaatcaatatgaatgtgagaaatgtta 113
||| || ||||||||||| | |||||||
Sbjct: 30 taacatatatatgaatgtgggcaatgtta 2
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaatttag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 126 gtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 83 attaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| |||||||| |||||| |||||| |||||| ||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 126
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||||||||||
Sbjct: 124 gtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatctag 65
Query: 61 a 61
|
Sbjct: 64 a 64
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 62 catatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataact 121
||||||||| || |||||||||||| || ||||||||| || ||||| ||||| |||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 122 tacattgtgaaac 134
|||||||||||||
Sbjct: 112 tacattgtgaaac 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| ||||| |||||| ||||||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaac 15
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 120 gtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatctag 61
Query: 61 a 61
|
Sbjct: 60 a 60
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 67 atatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacat 126
|||||||| |||||||||||| |||||||||||||||| ||||| |||||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 127 tgtgaaac 134
| ||||||
Sbjct: 113 tatgaaac 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 79.8 bits (40), Expect = 9e-15
Identities = 89/104 (85%), Gaps = 6/104 (5%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatat--atatc----t 72
|||||||||| ||||||||||||| |||||||||||||||||||| || ||||| |
Sbjct: 108 ttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatccatat 49
Query: 73 atttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|| |||||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatat 66
||||| |||| ||||||||||||| |||||||||||||||||| ||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatat 52
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| ||| |||| |||||||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctag 89
Query: 61 acatatat 68
||||||||
Sbjct: 88 acatatat 81
Score = 60.0 bits (30), Expect = 8e-09
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||| ||||||| | ||||| | | |||| |||||||| ||||||||||||| |||
Sbjct: 15 gtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaatttag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||| |||| | | |||||||||||| ||| |||||||| || | ||| ||||| |
Sbjct: 75 acacgcatatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 135 ttacattgtgaaac 148
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatctag 62
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 15 gtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 79.8 bits (40), Expect = 9e-15
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaatctaa 73
Query: 61 acat 64
||||
Sbjct: 74 acat 77
Score = 73.8 bits (37), Expect = 5e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 74 tttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 74 tttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaa 16
Query: 134 c 134
|
Sbjct: 15 c 15
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 49
||||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| || ||||| |||||| ||||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaac 121
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacat 64
|||||||||||||||| || ||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctagacat 78
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 122 gtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| |||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaac 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtg 130
||||||||||| |||||||| ||| || |||||| || ||| ||||||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/86 (86%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 25 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 84
|||||||||||||||||||||||| ||||||||||||| |||| | |||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagac------atctgtctagattcat 58
Query: 85 taaaatcaatatgaatgtgagaaatg 110
| | ||||||||||||||| ||||||
Sbjct: 59 tgacatcaatatgaatgtgggaaatg 84
Score = 69.9 bits (35), Expect = 8e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 25 catttcccacattcatattgatgttaatgaatctagaca 63
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagaca 46
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||| ||| |||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccaca 35
|||| ||||||||| |||||||| |||||||||||
Sbjct: 97 gttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
||||||||||||||||||||||| ||||| ||||| | |||||||||||||| ||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatcta 71
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 68 tatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacatt 127
||||||| |||||| ||||| |||||||| | |||| ||||| |||||| |||||||||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 128 gtgaaac 134
|||||||
Sbjct: 123 gtgaaac 129
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 55
|||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||
Sbjct: 111 gtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||||||||||||| || |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
|||||||||| ||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct: 120 gtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatcta 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||||||||||||| |||| || ||| ||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaac 120
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 113 gtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
|||||| ||||||||||||| || || || ||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattttagcactttccacattcatattgatgttaatga 68
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||| || |||||| ||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 81 tcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||| ||||||||||||||| || || || ||| ||||||||| ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaac 15
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||| ||||||||| |||||||||||| ||||||||| | |||| ||||| || ||| ||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 121 ttacattgtgaaac 134
||||||||||||||
Sbjct: 107 ttacattgtgaaac 120
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || ||||| ||| | |||||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatctag 61
Query: 61 a 61
|
Sbjct: 60 a 60
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||| ||||||||||||||| || |||||||||||| ||||
Sbjct: 15 gtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 126 gtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||||||| |||||||| ||||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaatttag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 83 attaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| |||||||| |||||| ||||| |||||| ||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||| |||||||| |||| ||||||| ||||| |||||||||||||||||
Sbjct: 122 gtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctag 63
Query: 61 ac 62
||
Sbjct: 62 ac 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| ||||| ||||| | |||| |||||| | ||||||| ||||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaac 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||| |||||||||||||||| |||| |||| || |||||
Sbjct: 15 gtttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 122 gtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Query: 61 acatatatat 70
|||| |||||
Sbjct: 62 acatctatat 53
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||||||||| ||||||||||| |||||||| ||| |||||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatctag 74
Query: 61 acatatatat 70
| | ||||||
Sbjct: 75 atagatatat 84
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatattga 45
||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 88 aatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 61 aatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 15
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 90 tcaatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
|||||||||||||| |||||| |||||| ||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||| |||||| |||| |||||||||||| ||||||||| |||||||
Sbjct: 127 gtttcataatgtaagttattctagcattgtccacattcatatagatgttaataaatctag 68
Query: 61 acata 65
|||||
Sbjct: 67 acata 63
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| ||||| ||| ||||||||||| |||| |||||||||||||||| ||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaac 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 96 tgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| | |||| |||||||||||||||| ||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaac 15
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 128 gtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| |||||| || ||| ||||||||| ||||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaac 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 71 ctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtg 130
|||| ||||||||||| |||| |||||||||| ||||| |||||| ||||| ||| ||
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
Query: 131 aaac 134
||||
Sbjct: 18 aaac 15
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 8 aatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacatata 67
|||||||| | |||||||||| ||||||||||||| |||| ||||||||||||||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 68 t 68
|
Sbjct: 60 t 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 8 aatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctagacatata 67
|||||||| | ||||| |||| ||||||||||||| ||| |||||||||||| || | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 68 tatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
||| | | |||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaa 109
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 13 aagtcattctaacatttcccacattcatattgatgttaatgaatc 57
||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 16 tcattctaacatttcccacattcatattgatgttaatgaatc 57
|||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 gattcattaaaatcaatatgaatgtgagaaatgttagaataactt 122
||||||||| ||||||||||||||| |||||| |||||| ||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 gattcattaaaatcaatatgaatgtgagaaatgttagaat 117
||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaat 85
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 5e-13
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatc--tagacatatatatctattt 76
||||| |||| ||||||||||||| |||||||||||||| || ||| | |||| ||| |
Sbjct: 132 ttctagcattgcccacattcatatagatgttaatgaatctatacacacacatatatatat 73
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatata--tatctattt 76
||||| |||| ||||||||||||| |||||||||||||||| | ||||| | | | | |
Sbjct: 33 ttctagcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtat 92
Query: 77 agattcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 93 agattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||| |||||||| ||||| | ||||||||||||||| |||||||| |||
Sbjct: 136 gtttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaatttag 77
Query: 61 a 61
|
Sbjct: 76 a 76
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| |||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcata 41
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 85 gtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 94 tatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaac 85
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttc 30
||||||||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 104 agaaatgttagaataacttacattgtgaaac 134
||||||| |||||| ||||||||||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatctag 61
Query: 61 a 61
|
Sbjct: 60 a 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 67 atatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacat 126
|||||||| |||||||||||| |||||||| | |||| ||||| |||||| ||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 127 tgtgaaac 134
||||||||
Sbjct: 113 tgtgaaac 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 15 gtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaac 15
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||||||||||||| || |||| |||||||||||||||||||||| ||| ||
Sbjct: 15 gtttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaatttat 74
Query: 61 acata 65
|||||
Sbjct: 75 acata 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 83 attaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||| ||||||||||||||| |||| || ||| ||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatg 53
||||||||||||||||||||||| |||||| |||||| ||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 82 cattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| || ||||| ||||||||||||| |||||| ||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattga 45
|||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 104 gtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 60.0 bits (30), Expect = 8e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcattt-ccacattcatattgat 59
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 90 tcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaac 104
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 88 aatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 60 aatcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatat 70
||||| |||| ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 110 ttctatcattgcccacattcatatagatgctaatgaatctagacatatatat 59
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 71.9 bits (36), Expect = 2e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaatgaat 69
Score = 63.9 bits (32), Expect = 5e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| ||||||||| |||||| ||||| |||||| ||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaac 15
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacattt 29
||||||||||||||||||||||| |||||
Sbjct: 102 gtttcacaatgtaagtcattctagcattt 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 95 atgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 64 atgaatgtga-aaatgctagaatgacttacattgtgaaac 102
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||||||||||||||||| ||| |||| || ||||| ||| |||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaatctag 74
Query: 61 acatatat 68
|| |||||
Sbjct: 75 acttatat 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| ||||| || || | ||| ||||||| ||||||||| ||||||
Sbjct: 73 tagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaac 15
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||| |||||||||||||||| |||| | ||||||||||
Sbjct: 126 gtttcataatgtaagtcattctagcattgtctacattcatat 85
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatat 70
||||| |||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 104 ttctagcattacccacattcatatatatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||| |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcat 40
|||||||||||||| |||||||| |||||| |||||||||
Sbjct: 15 gtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 95 atgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||| |||||| | ||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaac 15
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtg 130
|||||||| ||||||||||||||| |||||| || ||| |||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||| |||||||| || |||| ||||| |||||| ||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaac 121
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 8e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||||||||||||| ||||||||||||| |||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatttag 74
Query: 61 aca 63
|||
Sbjct: 75 aca 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||| |||||||| | ||||| |||| ||||||||||||| |||||
Sbjct: 132 gtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 8e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| |||||||||||| ||||||||| |||||||
Sbjct: 130 gtttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaatctag 71
Query: 61 aca 63
|||
Sbjct: 70 aca 68
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
|||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 109 gtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||| |||||| ||||| ||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaac 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| || |||||| |||||| ||||| ||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 69.9 bits (35), Expect = 8e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaac 115
Score = 69.9 bits (35), Expect = 8e-12
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaac 15
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatg 47
|||||| ||||||||||||| |||||||| |||||| |||||||||
Sbjct: 133 gtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 8e-12
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaa-tgaatctagacatatatatctattta 77
||||| |||| ||||||||||||| |||||||| | |||||||||| || || ||| ||
Sbjct: 33 ttctagcattacccacattcatatagatgttaaattaatctagacacctacatatatcta 92
Query: 78 gattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 93 gattcattaacatctatatgaatgtgggcaatgctagaa 131
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatat 66
||||| |||| ||||||||||||| |||||||||||||||||| ||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagatatat 84
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
|||||| |||||||| | ||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 130 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| ||||||||||| | |||| ||||| |||||||| ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaac 130
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaac 15
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaac 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgat 46
|||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||| | ||||| |||| ||||||| ||||| ||||||||||||||||
Sbjct: 126 gtttcacaatataagactttctagcattacccacatacatatagatgttaatgaatctaa 67
Query: 61 acatat 66
||||||
Sbjct: 66 acatat 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||| || | |||||||||||||| ||| ||||| ||||| | |||| ||||| |
Sbjct: 53 acatatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtc 112
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 113 ttatattgtgaaac 126
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||| | ||||| |||| ||||||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagactttctagcattacccacatacatatagatgttaatgaatctaa 74
Query: 61 acatat 66
||||||
Sbjct: 75 acatat 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
||||||| || | |||||||||||||| ||| ||||| ||||| | |||| ||||| |
Sbjct: 88 acatatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtc 29
Query: 121 ttacattgtgaaac 134
||| ||||||||||
Sbjct: 28 ttatattgtgaaac 15
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 31 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaaaat 90
|||||||||||| |||||||||||||||||||| ||| | | |||||||||||| ||
Sbjct: 21 ccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacat 80
Query: 91 caatatgaatgtgagaaatgttagaa 116
| ||||||||||| | |||| |||||
Sbjct: 81 ctatatgaatgtgggcaatgctagaa 106
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| ||||||||||||| ||||||||||||||||| || | ||| | | |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 79 attcattaaaatcaatatgaatgtg 103
||||||||| || |||||||||||
Sbjct: 46 attcattaacatatatatgaatgtg 22
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 50
|||||||||| ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 15 gtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| |||||||| |||||| |||||||||||| ||||||||||
Sbjct: 60 atcaatgtgaatgtgggaaatgctagaataacttatattgtgaaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 101 gtgagaaatgttagaataacttacattgtgaaac 134
|||||||||| |||||| ||||||||||||||||
Sbjct: 83 gtgagaaatgctagaatgacttacattgtgaaac 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttc 30
||||||||||||||||||||||| ||||||
Sbjct: 116 gtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| |||| |||||||| |||||||||||||||| |||| |||| | |||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 79 attcattaaaatcaatatgaatgtgagaaatgttagaa 116
||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatat 68
||||| |||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 96 gtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacatt 37
||||||||||||||||||||||| |||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||| |||||| |||||| |||||| ||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||| |||||| |||||| |||||| ||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaac 96
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 98 aatgtgagaaatgttagaataacttacattgtgaaac 134
|||||| |||||| |||||| ||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaac 139
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacat 64
||||| |||| ||||||||||||| |||||||||||||||||||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctagacat 53
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || | || ||||||||||| | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaatgaatctag 74
Query: 61 acatat 66
||||||
Sbjct: 75 acatat 80
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| ||||||||||||| ||| |||||||| |||
Sbjct: 116 gtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatttag 57
Query: 61 acata 65
|||||
Sbjct: 56 acata 52
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattga 45
||||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 90 tcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
||||||| || ||| |||||| |||||| ||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||||||||| ||||||||||||||||
Sbjct: 146 gtttcataatgtaagactttctagcattgtccacattcatataaatgttaatgaatctag 87
Query: 61 acatatatatctatttagattcattaaaatcaatatgaat 100
||| ||| || |||||||||||| ||||||||||||
Sbjct: 86 acacgcata--tacctagattcattaacatcaatatgaat 49
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| || | ||||||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacat 36
||||||||||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacat 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 99 atgtgagaaatgttagaataacttacattgtgaaac 134
||||| |||||| |||||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||||||| ||||| |||||||||||||||||
Sbjct: 137 gtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaatctag 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | ||||| |||| | |||||||| | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattgctcacattcacttagatgttaatgaatctag 74
Query: 61 aca 63
|||
Sbjct: 75 aca 77
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 25 catttcccacattcatattgatgttaatgaatctagacatatatatctatttagattcat 84
|||| ||||||||||||| |||||||| ||||||||||||||||| | ||||||||
Sbjct: 39 cattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagattcat 98
Query: 85 taaaatcaatatgaatgtgagaaatgttagaa 116
||| || ||||||||||| | |||| |||||
Sbjct: 99 taacatatatatgaatgtgggcaatgctagaa 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 78
||||| |||| ||||||||||||| |||||||||||||| | || |||||| | | |||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 79 attcattaaaatcaatatgaatgtg 103
||| ||||| || |||||||||||
Sbjct: 70 atttattaacatatatatgaatgtg 46
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaa 51
|||||||||||||||||||| || |||||| || ||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 84 ttaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||| |||||||| ||| ||||||||| || ||| ||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaa 51
|||||||||| ||||||||| || |||||| || ||| |||||||||||||
Sbjct: 112 gtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||||| || ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaac 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 130 gtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||||||||||||| ||| ||||||||||||
Sbjct: 148 gtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaatctag 89
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtg 103
|| | |||| | | ||||||||||| ||| |||| ||||||
Sbjct: 88 gcacacatatatgtctagattcattagtatctatataaatgtg 46
Score = 60.0 bits (30), Expect = 8e-09
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| | || |||||||| |||| ||| ||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcgttgcccacatttatatagatactaatgaatctag 74
Query: 61 acatatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaataac 120
|||||||| | | ||||||||||| || ||||||||||| | |||| ||||| |
Sbjct: 75 acatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtc 134
Query: 121 ttacattgtgaaac 134
||||||| ||||||
Sbjct: 135 ttacattatgaaac 148
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| ||||||||||||||||||| |||||| |||| || ||| |||||||||
Sbjct: 15 gtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatctag 74
Query: 61 acatata 67
| |||||
Sbjct: 75 atatata 81
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacat 36
|||||| |||||||||||||||| ||||||||||||
Sbjct: 118 gtttcataatgtaagtcattctagcatttcccacat 83
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| ||| || |||| |||||||||||||||||||| ||||| ||| ||||||
Sbjct: 73 tagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaac 15
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 98 gtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaatctag 39
Query: 61 aca 63
|||
Sbjct: 38 aca 36
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| |||||||||||| ||||| | ||| ||||| |||||||||||||||
Sbjct: 129 gtttcacaatataagtcattctaggatttctctcatccatataattgttaatgaatctag 70
Query: 61 acatata 67
|||||||
Sbjct: 69 acatata 63
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcata 41
||||||||||||||||||||||| |||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtattttccacattcata 55
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatatt 43
|||||||||||||||||||| || ||||||||||||||||||
Sbjct: 99 gtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 92 aatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||||| || ||| ||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaac 99
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 59
|||||||||| |||||||||||| |||||| || || |||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||| || ||||||||| |||||| ||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||| ||||| |||| | |||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 124 gttttacaatataagactttctaacattgcccacatatatatagatgttaatgaatctaa 65
Query: 61 acatatatat 70
||| ||||||
Sbjct: 64 acacatatat 55
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 63 atatatatctatttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||| | |||||||||||||| ||| |||| ||||| | ||||||||||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaa 106
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 54
|||| ||||| |||||||||||| |||||| |||||| |||||||||| |||||
Sbjct: 83 gttttacaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||| ||||||||||||| |||||| ||||| ||||| ||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaac 83
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatcta 59
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 74 tttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||||| ||||| |||| | || |||||||| |||||||||||||||||
Sbjct: 15 gtttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| ||| |||| | ||||| |||| |||| |||||||| |||| ||||||||||||
Sbjct: 130 gtttcataatataagactttctagcattacccatattcatatagatgctaatgaatctag 71
Query: 61 a 61
|
Sbjct: 70 a 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| ||| |||||||| |||| |||| ||||| ||||| ||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaac 15
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| ||| ||| |||| |||||||||||||||||
Sbjct: 127 gtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaatctag 68
Query: 61 acata 65
|||||
Sbjct: 67 acata 63
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacatt 37
||||||||||||||||||||||| ||||| |||||||
Sbjct: 106 gtttcacaatgtaagtcattctagcattttccacatt 70
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattc 38
||||||||||| ||||||||||| ||||| ||| ||||
Sbjct: 15 gtttcacaatgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacatt 37
||||||||||||||||||||||| ||||||| |||||
Sbjct: 79 gtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattcta 23
|||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcta 37
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 gaaatgttagaataacttacattgtgaaac 134
|||||| |||||| ||||||||||||||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaac 79
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| ||||| |||| ||||||| | || ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagattttctagcattgcccacatatacatagatgttaatgaatctaa 74
Query: 61 acatatatatcta 73
||||||| |||||
Sbjct: 75 acatatacatcta 87
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatcta 59
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 74 tttagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
|||||||||||||| ||| ||||||||||| | |||| |||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||||| ||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Query: 61 a 61
|
Sbjct: 75 a 75
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 30 cccacattcatattgatgttaatgaatc--tagacatatatatctatttagattcattaa 87
||||||||||||| |||||||||||||| || ||| |||| | | | ||||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaa 103
Query: 88 aatcaatatgaatgtg 103
||| |||||||||||
Sbjct: 104 catctatatgaatgtg 119
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 30 cccacattcatattgatgttaatgaatc--tagacatatatatctatttagattcattaa 87
||||||||||||| |||||||||||||| || ||| |||| | | | ||||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaa 62
Query: 88 aatcaatatgaatgtg 103
||| |||||||||||
Sbjct: 61 catctatatgaatgtg 46
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||||||| ||||||||| || ||||| || ||| | ||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctag 74
Query: 61 acatatat 68
||| ||||
Sbjct: 75 acagatat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 93 atatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||| |||||||| ||| ||||| ||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaac 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatat 42
|||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 120 gtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||||||||||||||||| || |||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 89 atcaatatgaatgtgagaaatgttagaataacttacattgtgaaac 134
|||||||||||||||| |||| || ||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaac 15
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 90 tcaatatgaatgtgagaaatgttagaataacttacattgtgaaa 133
||||||||||||||| |||| |||||| ||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatattga 45
||||| |||||||||||||||| |||| ||||||||||||||
Sbjct: 105 tttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 19 ttctaacatttcccacattcatattgatgttaatgaatctagacatatatat 70
||||| |||| ||||||||||||| |||||||| |||||||| |||| ||||
Sbjct: 33 ttctagcattgcccacattcatatagatgttaacgaatctaggcatacatat 84
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcat 40
|||||||||||||||||||| || |||||||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccaca 35
||||||||||||||||||||||| ||||| |||||
Sbjct: 98 gtttcacaatgtaagtcattctagcattttccaca 64
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 56
||||||||||||||| | ||||| | || ||||||||||||| ||| |||||||||
Sbjct: 104 gtttcacaatgtaagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctaacatttcccacat 36
||||||||||||||||||| ||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcatttcccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattcta 23
|||||||||||||||||||||||
Sbjct: 84 gtttcacaatgtaagtcattcta 62
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
|||||| |||||||| | ||||| |||| |||||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctaccattgtccacat--atatagatgttaatgaatctag 72
Query: 61 acatatatatctatttagattcattaa 87
| | ||| || ||| ||||||||||||
Sbjct: 73 aaacatacatatatctagattcattaa 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 60
||||||||||||||| | || || |||| ||||||| || | ||| |||||||||||||
Sbjct: 146 gtttcacaatgtaagactttttagcattgtccacatttatttagatattaatgaatctag 87
Query: 61 acatatatatctatttagattcattaaaatcaatat 96
| |||| ||| | | |||||||||||| ||| ||||
Sbjct: 86 atatatgtatgtttctagattcattaacatctatat 51
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaga 61
||||| |||||||| | ||||| |||| |||||||||||| ||||||||| ||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgtccacattcatatagatgttaataaatctaga 75
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 25 catttcccacattcatattgatgttaatgaatctagaca 63
|||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 108 cattgcccacattcatatagatgttaatgaatttagaca 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 48
|||||| |||||||| | ||||| |||| ||||||||||||| |||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
