miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 262 bits (132), Expect = 2e-69
Identities = 206/233 (88%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| |||||||||| | ||| |||||| ||||||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactattcatgttcaacgtttgaccgttcgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||| |||| |||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttaaaaaatttttatgattagtatttttattactattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
|| ||||||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 127 atactttatgtgtgactaaatattttcaaatttttcacaaatttttcaaataagacggac 186
Query: 182 ggttaaacgttggacacggattttcacggctgcacttattttgaaacggaggt 234
||||||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct: 187 ggttaaacgttggacacggatatccacggctgcacttattttgggacggaggt 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcag 24
||||||||||||||||||||||||
Sbjct: 239 acctccgtcccaaaataagtgcag 216
>RF01062;MIR812;AP008214.1/27600377-27600200 39947:Oryza sativa
Japonica Group
Length = 178
Score = 230 bits (116), Expect = 7e-60
Identities = 145/157 (92%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 157 tttgaccgttcgtcttatttgaaaattttttatgattactatttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 97 ataaaacatgaatagtactttatgtgtgactaattttttttaaaattttcataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggattt 204
||||||||||||||||| |||||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttggacacggattt 1
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 230 bits (116), Expect = 7e-60
Identities = 202/233 (86%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactattcacattcaacgtttgaccgttcgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
||||||||||||||||||| |||| |||||| ||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaaattttttataattagtattttcattactattaaatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 127 gtactttatgtgtgactaaatattttcaaatttttcacaaatttttcaaataagacggac 186
Query: 182 ggttaaacgttggacacggattttcacggctgcacttattttgaaacggaggt 234
||| ||||||||| ||| || | ||||||||||||||||||| ||||||||
Sbjct: 187 ggtcaaacgttgggaacgaatatccacggctgcacttattttgggacggaggt 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcag 24
||||||||||||||||||||||||
Sbjct: 239 acctccgtcccaaaataagtgcag 216
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||| ||||| ||||||||
Sbjct: 77 ttttcaaataagacgaacggtcaaacgttg 48
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 222 bits (112), Expect = 2e-57
Identities = 202/233 (86%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| ||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaatttttttatgattagtatttttattgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
|| ||||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 127 atactttatgtgtgactaaatatttttaattttttcataaattcttcaaataagacggac 186
Query: 182 ggttaaacgttggacacggattttcacggctgcacttattttgaaacggaggt 234
||| ||||||||| || ||| ||||||||||||||||||||| ||||||||
Sbjct: 187 ggtcaaacgttgggca-tgatattcacggctgcacttattttgggacggaggt 238
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 165 tttcaaataagacggacggttaaacgttg 193
|||||||||||||||||||| ||||||||
Sbjct: 76 tttcaaataagacggacggtcaaacgttg 48
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcag 24
||||||||||||||||||||||||
Sbjct: 238 acctccgtcccaaaataagtgcag 215
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 204 bits (103), Expect = 4e-52
Identities = 168/192 (87%)
Strand = Plus / Minus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| ||||
Sbjct: 239 cctccgtcccaaaataagtgcagttttgcactattcacattcaacgtttgaccgtccgtc 180
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 179 ttatttaaaaattttttatgattagtatttttattgctattagatgataaaacatgaata 120
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 119 gtactttatgtgtgactaaatgtttttaattttttcacaaatttttcaaataagacggac 60
Query: 182 ggttaaacgttg 193
||| ||||||||
Sbjct: 59 ggtcaaacgttg 48
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||| ||||||||||||||||||||| ||||||||| | ||| |||||| ||| |||
Sbjct: 6 acctccatcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgt 65
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 66 cttatttgaaaa 77
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
|||| |||||||||||||||| ||||||||
Sbjct: 169 tttttaaataagacggacggtcaaacgttg 198
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 198 bits (100), Expect = 2e-50
Identities = 165/189 (87%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| |||| |||| | ||| |||||| ||| ||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactgttcacgttcaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaaattttttatgattagtatttttattgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 127 gtactttatgtgtgactaaatgtttttaattttttcacaaatttttcaaataagacggac 186
Query: 182 ggttaaacg 190
||| |||||
Sbjct: 187 ggtcaaacg 195
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||||||||||||||||| ||||||||| | | |||||| ||| |||
Sbjct: 240 acctccgtcccaaaataagtgcagttttgcactattcacgtttagcgtttgaccgtccgt 181
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 180 cttatttgaaaa 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 77 ttttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 196 bits (99), Expect = 1e-49
Identities = 167/192 (86%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| |||||| || | ||| |||||| ||| ||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttctactatttatgttcaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaaattttttataattggtatttttattgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 127 gtactttatgtgtgactaaatgtttttaattttttcataaatttttcaaataagacggac 186
Query: 182 ggttaaacgttg 193
||| ||||||||
Sbjct: 187 ggtcaaacgttg 198
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||||||||||||||||||||||||||| | ||| |||||| ||| |||
Sbjct: 240 acctccgtcccaaaataagtgcagttttacactattcacgttcaacgtttgaccgtccgt 181
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 180 cttatttgaaaa 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 77 ttttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 196 bits (99), Expect = 1e-49
Identities = 167/192 (86%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| ||||||||| ||| |||||| ||| ||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactattcacgatcaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaaattttttatgattagtatttttgttgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 127 gtactttatgtgtgactaaatgcttttaattttttcacaaatttttcaaataagacggac 186
Query: 182 ggttaaacgttg 193
||| ||||||||
Sbjct: 187 ggtcaaacgttg 198
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||| ||||||||||||||||||||||||||||| | ||| |||||| ||| |||
Sbjct: 240 acctccgttccaaaataagtgcagttttacactattcacgttcaacgtttgaccgtccgt 181
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 180 cttatttgaaaa 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 77 ttttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AP003616.4/59947-60190 39947:Oryza sativa Japonica
Group
Length = 244
Score = 188 bits (95), Expect = 2e-47
Identities = 167/192 (86%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
|||||| || ||||||||||||||||| ||||||||| | ||| |||||| ||| ||||
Sbjct: 7 cctccgccctaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttgaaaattttttatgattagtatttttattgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| || |||| ||||||||||||||||||||||||
Sbjct: 127 gtactttatgtgtgactaaatgtttt-taattttttataaatttttcaaataagacggac 185
Query: 182 ggttaaacgttg 193
||| ||||||||
Sbjct: 186 ggtcaaacgttg 197
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 3 ctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtct 62
|||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| |||||
Sbjct: 237 ctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgtct 178
Query: 63 tatttgaaaa 72
||||||||||
Sbjct: 177 tatttgaaaa 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 77 ttttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 186 bits (94), Expect = 9e-47
Identities = 166/191 (86%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 4 tccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtctt 63
||||||||||||||||||||||||| ||||||||| | || |||||| ||| ||||||
Sbjct: 9 tccgtcccaaaataagtgcagttttgcactattcacgtttaacgtttgaccgtccgtctt 68
Query: 64 atttgaaaatttt-ttatgattactatttttattgttattacatgataaaacatgaatag 122
|||||||| |||| ||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 69 atttgaaattttttttatgattagtatttttattgctattagatgataaaacatgaatag 128
Query: 123 tattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacg 182
|| ||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 129 tactttatgtgtgactaaatatttttaattttttcataaatttttcaaataagacggacg 188
Query: 183 gttaaacgttg 193
|| ||||||||
Sbjct: 189 gtcaaacgttg 199
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||| ||||||| ||||| ||||||||| | ||| |||||| ||| |||
Sbjct: 239 acctccgtcccaaa-taagtgc-gttttgcactattcacgttcaacgtttgaccgtccgt 182
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 181 cttatttgaaaa 170
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 165 tttcaaataagacggacggttaaacgtt 192
|||||||||||||||||||| |||||||
Sbjct: 76 tttcaaataagacggacggtcaaacgtt 49
>RF01062;MIR812;AP008210.1/34581048-34581220 39947:Oryza sativa
Japonica Group
Length = 173
Score = 182 bits (92), Expect = 1e-45
Identities = 151/173 (87%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||| |||||| |||||| | ||||| |||||| |||| ||||||||||||||||||
Sbjct: 173 ctattcacctccaatgtttgaccattcgttttatttaaaaaatttttatgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 113 ttattgttattagatgataaaacatgaatagtactttatgtgtgactaactttttttaat 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|||||||||| ||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 53 tttttcataaaattttcaaataagacggacggtcaaacgttagacacggattt 1
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaatttt 76
|||||| ||| |||||||||||||||||||
Sbjct: 16 gtttgaccgtccgtcttatttgaaaatttt 45
>RF01062;MIR812;AY946549.1/36-208 4530:Oryza sativa (rice)
Length = 173
Score = 182 bits (92), Expect = 1e-45
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct: 157 tttgaccgttcgtcttatttaaattttttttatgattactatttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 97 ataaaacatgaatagtattttatgtgtgactaatttttttaaaatttttcataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggattt 204
|||||||||||| || ||| |||||||||||||||
Sbjct: 37 taaataagacggatagtcaaatgttggacacggattt 1
>RF01062;MIR812;AACV01025027.1/104825-104997 39947:Oryza sativa
Japonica Group
Length = 173
Score = 178 bits (90), Expect = 2e-44
Identities = 146/167 (87%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| |||||| ||||| | |||||||||| |||||||||||||||||||
Sbjct: 173 ctattcatctccaacgtttgaccgttcatattatttgaaatttttttatgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
||||| |||||| || ||||| ||||||||||| |||||||||||||| | ||
Sbjct: 113 ttattattattagataataaagcatgaatagtactttatgtgtgactatttttctaataa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacac 198
|||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 53 attttcataaatttttcaaataagacggacagtcaaacgttggacac 7
>RF01062;MIR812;AP008208.1/14869928-14869757 39947:Oryza sativa
Japonica Group
Length = 172
Score = 176 bits (89), Expect = 9e-44
Identities = 149/170 (87%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 169 ttcatgtccaacgtttgaccgttcgtcttatttgaaaattttttatgattagtattttta 110
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
||||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 109 ttgttattagatgataaaatatgaatagtattttatgtgtgactaaatttttaaaaaaaa 50
Query: 155 ttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|| ||||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 49 tt-gtaaattttttaagtaagacggacgattaaacgttggacatggattt 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
||||||||||||||| ||||| ||||||||||||
Sbjct: 132 ttttcaaataagacgaacggtcaaacgttggaca 165
>RF01062;MIR812;AAAA02013629.1/14001-14173 39946:Oryza sativa Indica
Group
Length = 173
Score = 174 bits (88), Expect = 4e-43
Identities = 150/173 (86%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| | |||||||| | | |||||||||||||||| ||||||||||||| |||||
Sbjct: 173 ctattcattttcaaagtttaaccattcgtcttatttgaaatttttttatgattattattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 113 ttattgttattagatgataaaatatgaatagtactttatgtgtgactaatttttttaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|||| |||||||||||||||||||| || ||| |||||||||| ||||||||
Sbjct: 53 ttttttataaatttttcaaataagacagatggtcaaacgttggatacggattt 1
>RF01062;MIR812;AL731784.3/135505-135675 4530:Oryza sativa (rice)
Length = 171
Score = 172 bits (87), Expect = 1e-42
Identities = 137/156 (87%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgatcgttcgtcttatttgaaatttttttatgattaatatttttattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||| ||| |||||||| |||||| ||| |||||| |||||||
Sbjct: 98 gataaaacatgaattgtaatttatgtgcgactaaatgtttttaaatttttcacaaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggat 202
|||||||||||||||||| ||||||||| |||||||
Sbjct: 38 tcaaataagacggacggtcaaacgttgggcacggat 3
>RF01062;MIR812;AAAA02004305.1/15807-15633 39946:Oryza sativa Indica
Group
Length = 175
Score = 168 bits (85), Expect = 2e-41
Identities = 153/176 (86%), Gaps = 4/176 (2%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||| ||| |||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct: 175 ctattcatcttcaacgtttgaccgttcgtcttatgtgaaatttttttatgattactattt 116
Query: 92 ttattgttattacatgataaaacatgaatagta---ttttatgtgtgactaannnnnnna 148
| ||||||||| ||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 115 tatttgttattagatgataaaatatgaatagtacttttttgtgtgtgact-attttttta 57
Query: 149 aaaattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 aaaaaattcataaatttttcaaataagacggacggttaaacgttggacacggattt 1
>RF01062;MIR812;AC108762.2/153942-153770 39947:Oryza sativa Japonica
Group
Length = 173
Score = 168 bits (85), Expect = 2e-41
Identities = 141/162 (87%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 173 ctattcatctccaacgtttgatcgtttgtcttatttgaattttttttatgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||| ||||| || |||||||||||||| || |||||||||||||| ||||
Sbjct: 113 ttattgctattagataataaaacatgaataatactttatgtgtgactatttttttaaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttg 193
| ||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 53 aatttcataaatttttcaaataagacgaacggtcaaatgttg 12
>RF01062;MIR812;AAAA02005541.1/24465-24293 39946:Oryza sativa Indica
Group
Length = 173
Score = 168 bits (85), Expect = 2e-41
Identities = 141/162 (87%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| | ||| |||||| ||| |||||||||||||||||||||||| ||| |||||
Sbjct: 173 ctattcatgttcaacgtttgaccgtccgtcttatttgaaaattttttatggttattattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
||||| ||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 113 ttattactattagatgataaaacatgaatagtactttatgtgtgactaaatgtttttaat 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttg 193
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tttttcataaatttttcaaataagacggacggttaaacgttg 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 133 ttttcaaataagacggacggtcaaacgttg 162
>RF01062;MIR812;AACV01014398.1/6458-6286 39947:Oryza sativa Japonica
Group
Length = 173
Score = 167 bits (84), Expect = 9e-41
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||||||| || |||| | | ||||| ||||||||||||||||||||||||||||||
Sbjct: 173 ctattcatctctaatgtttaaccattcgttttatttgaaaattttttatgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| |||||||||||||||||| | |||||||||||||| ||||
Sbjct: 113 ttattgttattagatgataaaacatgaatagcactttatgtgtgactattttattaaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
| |||||||| ||||| |||||||| | ||||| | |||||||||||||||||
Sbjct: 53 aatttcataatttttttaaataagatgcacggtcatacgttggacacggattt 1
>RF01062;MIR812;AP005100.4/8478-8306 39947:Oryza sativa Japonica
Group
Length = 173
Score = 165 bits (83), Expect = 3e-40
Identities = 133/152 (87%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct: 158 gtttgaccgttcatcttatttgaaaattttttatgattaatatttttattattattataa 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||||||||||| ||||||| | ||||||||||||||
Sbjct: 98 gataaaacatgaatagtattttatgtatgactaattttttttatttttttcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacac 198
|||||||||||||||||| |||||||||||||
Sbjct: 38 tcaaataagacggacggtcaaacgttggacac 7
>RF01062;MIR812;AACV01022388.1/14766-14591 39947:Oryza sativa
Japonica Group
Length = 176
Score = 165 bits (83), Expect = 3e-40
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| || || ||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 176 ctattcatgtctaacgtttgatcggtcgtcttatttgaatattttttatgattactactt 117
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaa- 150
|||||||||||| |||||||||||||||||||| ||||||||||||||| |||
Sbjct: 116 ttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttttaaaa 57
Query: 151 -aattttcataaatttttcaaataagacgga 180
| ||||||||||||||||||||||||||||
Sbjct: 56 tatttttcataaatttttcaaataagacgga 26
>RF01062;MIR812;AP008215.1/10128587-10128414 39947:Oryza sativa
Japonica Group
Length = 174
Score = 163 bits (82), Expect = 1e-39
Identities = 104/110 (94%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaatttttt-atgattactatt 90
||||| |||||||| |||||||| |||||||||||| |||||||||| ||||||||||||
Sbjct: 174 ctatttatctccaacgtttgatcattcgtcttatttaaaaatttttttatgattactatt 115
Query: 91 tttattgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 114 tttattgttattagatgataaaacatgaatagtattttatgtgtgactaa 65
>RF01062;MIR812;ABRL01001958.1/15569-15396 65489:Oryza barthii
Length = 174
Score = 163 bits (82), Expect = 1e-39
Identities = 139/159 (87%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||| ||
Sbjct: 159 gtttgaccgttcgtcttatttgaaatttttttatgtttactattttcattgttattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgactaa-nnnnnnnaaaaattttcataaattt 165
|||||||||||||||| | ||||||| || |||| |||||||||||||||||
Sbjct: 99 gataaaacatgaatagaactttatgtatggctaatttttttttaaaattttcataaattt 40
Query: 166 ttcaaataagacggacggttaaacgttggacacggattt 204
||||||||||||||||||| |||||||||| ||||||||
Sbjct: 39 ttcaaataagacggacggtcaaacgttggatacggattt 1
>RF01062;MIR812;AAAA02018832.1/20699-20526 39946:Oryza sativa Indica
Group
Length = 174
Score = 161 bits (81), Expect = 5e-39
Identities = 150/174 (86%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||| ||| ||||| |||| || |||||||||| |||||||||||||||||||
Sbjct: 174 ctattcatcttcaacatttgaccgtttgttttatttgaaatttttttatgattactattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaa-nnnnnnnaaa 150
|||||||||||| |||||||||||| ||||||| ||||||||| ||||| |||
Sbjct: 114 ttattgttattagatgataaaacataaatagtactttatgtgtcactaactttttaaaaa 55
Query: 151 aattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|| || ||||||||||| |||||||||||||||| ||||||| |||||||||||
Sbjct: 54 aaattgcataaattttttaaataagacggacggtcaaacgttagacacggattt 1
>RF01062;MIR812;AAAA02027312.1/3814-3986 39946:Oryza sativa Indica
Group
Length = 173
Score = 161 bits (81), Expect = 5e-39
Identities = 146/170 (85%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||||| ||| |||||| |||||||||||||| |||| |||||||||||||||||||||
Sbjct: 170 ttcatcttcaacgtttgaccgttcgtcttatttaaaaaatttttatgattactattttta 111
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
||||||||| ||| |||||||||||||||||||||| ||| ||||| |||| ||
Sbjct: 110 ttgttattagatggtaaaacatgaatagtattttatatgtaactaattttaataaaattt 51
Query: 155 ttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|| |||| |||| |||||||||||||||| ||| |||||| ||||||||
Sbjct: 50 tttataatatttttaaataagacggacggtcaaatgttggatacggattt 1
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 161 bits (81), Expect = 5e-39
Identities = 167/194 (86%), Gaps = 3/194 (1%)
Strand = Plus / Minus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| ||||
Sbjct: 240 cctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgtc 181
Query: 62 ttatttgaaaat-tttttatgattactatttt-tattgttattacatgataaaacatgaa 119
|||||||||||| ||||||| |||| |||||| ||||| ||||| ||||| |||||||||
Sbjct: 180 ttatttgaaaatgtttttataattagtattttatattgctattagatgat-aaacatgaa 122
Query: 120 tagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacgg 179
||||| ||||||||||||||| || |||||| ||||||||||||||||||||
Sbjct: 121 tagtactttatgtgtgactaaatgtttttaattttttcacaaatttttcaaataagacgg 62
Query: 180 acggttaaacgttg 193
||||| ||||||||
Sbjct: 61 acggtcaaacgttg 48
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| |||
Sbjct: 6 acctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgt 65
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 66 cttatttgaaaa 77
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 170 ttttcaaataagacggacggtcaaacgttg 199
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 159 bits (80), Expect = 2e-38
Identities = 164/193 (84%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
|||||||||||||||||||||| |||| ||||||||| | || |||||| ||| ||||
Sbjct: 7 cctccgtcccaaaataagtgcattttttcactattcacgtttaacgtttgaccgtccgtc 66
Query: 62 ttatttgaaaattttttatgatt-actatttttattgttattacatgataaaacatgaat 120
|||||| |||||||||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 67 ttattttaaaattttttatgatttagtatttttattgctattagatgataaaacatgaat 126
Query: 121 agtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacgga 180
|||| | |||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 127 agtactcaatgtgtgactaaatgtttttaattttttcacaaatttttcaaataagacgga 186
Query: 181 cggttaaacgttg 193
|||| ||||||||
Sbjct: 187 cggtcaaacgttg 199
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| |||
Sbjct: 241 acctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgt 182
Query: 61 cttatttgaaaa 72
||||||||||||
Sbjct: 181 cttatttgaaaa 170
>RF01062;MIR812;AAAA02030037.1/1370-1196 39946:Oryza sativa Indica
Group
Length = 175
Score = 157 bits (79), Expect = 8e-38
Identities = 150/175 (85%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||||||| || |||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 175 ctattcatctctaacgtttgactgttcgtcttatttgaaaattttttatgattattattt 116
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaa--nnnnnnnaa 149
|||||||||||| ||||||||||||||||| || ||||||||||||||| ||
Sbjct: 115 ttattgttattagatgataaaacatgaataatactttatgtgtgactaatttttttaaaa 56
Query: 150 aaattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
||| | |||| |||||||||||||| ||||||| |||| ||||||||||||||
Sbjct: 55 aaaaaattataattttttcaaataagatggacggtcaaacattggacacggattt 1
>RF01062;MIR812;AACV01011182.1/7873-7689 39947:Oryza sativa Japonica
Group
Length = 185
Score = 157 bits (79), Expect = 8e-38
Identities = 112/123 (91%)
Strand = Plus / Minus
Query: 18 agtgcagttttacactattcatctccaaagtttgatcgttcgtcttatttgaaaattttt 77
||||||||||| ||||||||| | ||| |||||| ||| ||||||||||||||||||||
Sbjct: 185 agtgcagttttgcactattcacgttcaacgtttgaccgtccgtcttatttgaaaattttt 126
Query: 78 tatgattactatttttattgttattacatgataaaacatgaatagtattttatgtgtgac 137
|||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 125 tatgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgac 66
Query: 138 taa 140
|||
Sbjct: 65 taa 63
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||| ||||||||
Sbjct: 131 ttttcaaataagacggacggtcaaacgttg 160
>RF01062;MIR812;AAAA02014397.1/14648-14476 39946:Oryza sativa Indica
Group
Length = 173
Score = 155 bits (78), Expect = 3e-37
Identities = 146/171 (85%)
Strand = Plus / Minus
Query: 33 tattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttt 92
||||||| || || |||| ||||||||| |||||| ||||||||||||||||| ||||||
Sbjct: 172 tattcatgtctaacgtttaatcgttcgttttatttaaaaattttttatgattaatatttt 113
Query: 93 tattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaa 152
|||| ||| || |||||||||||||||||||| |||| ||||||||| ||
Sbjct: 112 tatttttactagatgataaaacatgaatagtactttacgtgtgactatttttttttaatt 53
Query: 153 ttttcataaatttttcaaataagacggacggttaaacgttggacacggatt 203
||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 52 ttttcataaattttttaaataagacggacggtcaaacgttggacacggatt 2
>RF01062;MIR812;AACV01010047.1/12882-12711 39947:Oryza sativa
Japonica Group
Length = 172
Score = 155 bits (78), Expect = 3e-37
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||| ||||||||||||| |||| |||||||||| ||||||||||| |||||||||
Sbjct: 157 tttgattgttcgtcttatttaaaaaaaatttatgattagtatttttattgctattacatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||
Sbjct: 97 ataaaacatgaatagtactttatgtgtgactaaatatttttaaatttttcataaaatttt 38
Query: 168 caaataagacggacggttaaacgttggacacggat 202
|||||||||||||||| ||||||||| |||||||
Sbjct: 37 taaataagacggacggtcaaacgttgggcacggat 3
>RF01062;MIR812;AL662961.3/176770-176941 39947:Oryza sativa Japonica
Group
Length = 172
Score = 153 bits (77), Expect = 1e-36
Identities = 143/166 (86%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||| ||| |||||| ||||| |||||| ||||||||||| |||||||||||||
Sbjct: 172 ctattcatcttcaacgtttgaccgttcatcttatgtgaaaattttt-atgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 113 ttattattattaaatgataaaatatgaatagtattttatgtgtgactattctttaaaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggaca 197
|||| |||||| ||| |||||||||||||||| ||| ||||||||
Sbjct: 53 gtttttataaatattttaaataagacggacggtcaaatgttggaca 8
>RF01062;MIR812;AACV01010653.1/22675-22848 39947:Oryza sativa
Japonica Group
Length = 174
Score = 153 bits (77), Expect = 1e-36
Identities = 149/174 (85%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| |||| | ||||| | |||||| ||| |||||||| ||||||||||
Sbjct: 174 ctattcatctccaacgtttaaccgttcattttatttaaaatttttttataattactattt 115
Query: 92 ttattgttattacatgataaaacatgaatagta-ttttatgtgtgactaannnnnnnaaa 150
|||||||||||| |||||||||||| ||||||| ||||| ||||| |||| |||
Sbjct: 114 ttattgttattagatgataaaacataaatagtacttttaagtgtggctaaattttttaaa 55
Query: 151 aattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|| ||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 54 aaaaatcataaatttttcaaataaaacggacggttaaacgttggatacggattt 1
>RF01062;MIR812;AP008209.1/687985-688157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 153 bits (77), Expect = 1e-36
Identities = 136/158 (86%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| | |||||||||||||||| ||||||| ||||| |||||||||||||| || ||
Sbjct: 158 gtttgaccattcgtcttatttgaaatttttttacgattaatatttttattgttactagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| ||||||||||||||| || || |||||||||||
Sbjct: 98 gataaaacatgaatagtactttatgtgtgactaactttttttaattttctcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggattt 204
|||||||||||||||||||||| |||| |||| |||||
Sbjct: 38 tcaaataagacggacggttaaatgttgaacacagattt 1
>RF01062;MIR812;AACV01019002.1/7055-6886 39947:Oryza sativa Japonica
Group
Length = 170
Score = 151 bits (76), Expect = 5e-36
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| | ||| |||||| ||||||| ||||||||||| |||||||||||| |||||
Sbjct: 170 ctattcatgttcaacgtttgaccgttcgttttatttgaaaaatttttatgattagtattt 111
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| | |||||||| | ||||||||||||||||||||||| |||
Sbjct: 110 ttattgttattagaagataaaacgtaaatagtattttatgtgtgactaaatattttcaaa 51
Query: 152 attttcataaatttttcaaataagacggacggttaaacgtt 192
||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 50 tttttcataatttttttaaataagacggacggtcaaacgtt 10
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 160 aaatttttcaaataagacggacggttaaacgttg 193
||||||||||||||| ||| ||||| ||||||||
Sbjct: 126 aaatttttcaaataaaacgaacggtcaaacgttg 159
>RF01062;MIR812;AP003219.3/57542-57709 39947:Oryza sativa Japonica
Group
Length = 168
Score = 151 bits (76), Expect = 5e-36
Identities = 126/145 (86%)
Strand = Plus / Minus
Query: 50 tgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgat 109
||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||
Sbjct: 155 tgatcgttcgtcttatttgaaaattttttataattagtatttttattgctattagatgat 96
Query: 110 aaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttca 169
||||||||||||||||||||||||||||||| || |||||| || ||||| |
Sbjct: 95 aaaacatgaatagtattttatgtgtgactaaatatttttaattttttcacaattttttta 36
Query: 170 aataagacggacggttaaacgttgg 194
||||||||||| ||| |||||||||
Sbjct: 35 aataagacggatggtcaaacgttgg 11
>RF01062;MIR812;AACV01004847.1/4452-4624 39947:Oryza sativa Japonica
Group
Length = 173
Score = 151 bits (76), Expect = 5e-36
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| |||||| | ||||| |||||||||| |||||||||||||||||||
Sbjct: 173 ctattcatctccaacgtttgaccattcgttttatttgaaatttttttatgattactattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||| ||||| |||||| ||||| ||||||| ||||||| ||||||| |||
Sbjct: 113 ttattgctattaaatgatagaacataaatagtactttatgtctgactaattttttttaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
| ||||||| ||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 53 aaaatcataaagttttcaaataagacggacggtcaaacgttagacacgaattt 1
>RF01062;MIR812;AAAA02023282.1/1611-1439 39946:Oryza sativa Indica
Group
Length = 173
Score = 149 bits (75), Expect = 2e-35
Identities = 119/136 (87%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 146 cgtcttatttgaaaattttttatgattagtatttttattgctattagatgataaaacata 87
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
||||||| ||||||||||||||| || |||||| ||||||||||||||||||
Sbjct: 86 aatagtactttatgtgtgactaaatgtttttaactttttcacaaatttttcaaataagac 27
Query: 178 ggacggttaaacgttg 193
||||||| ||||||||
Sbjct: 26 ggacggtcaaacgttg 11
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||||||||||||
Sbjct: 132 ttttcaaataagacggacggttaaacgttg 161
>RF01062;MIR812;AL606622.3/117271-117099 39947:Oryza sativa Japonica
Group
Length = 173
Score = 149 bits (75), Expect = 2e-35
Identities = 146/172 (84%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| ||||| |||||| |||||||||||||| ||||||| ||||||| |||||
Sbjct: 173 ctattcatgtccaacgtttgaccgttcgtcttatttagaaattttatatgattggtattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
||||||||| | ||||||||| ||||||| || ||||||||||||||| |||
Sbjct: 113 ttattgttagtggatgataaaatatgaataatagtttatgtgtgactaattttttaaaat 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggatt 203
||||||||| ||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 53 attttcatattttttttaaataagacggacggtcaaacgttggacacggatt 2
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 149 bits (75), Expect = 2e-35
Identities = 165/195 (84%), Gaps = 3/195 (1%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaag--tttgatcgttcg 59
|||||||||||||||||||| |||||| |||||||||| | || | ||||| ||| ||
Sbjct: 7 cctccgtcccaaaataagtgtagttttgcactattcatgttcaccgggtttgaccgtccg 66
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
|||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||
Sbjct: 67 tcttatttgaaaattttttatgattaatatttttattgctattagatgataaaatatgaa 126
Query: 120 tagtatttta-tgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacg 178
||||| |||| ||||||||| || |||||| |||||||||||||||||||
Sbjct: 127 tagtactttagtgtgtgactgtatgtttttaattttttcacaaatttttcaaataagacg 186
Query: 179 gacggttaaacgttg 193
|||||| ||||||||
Sbjct: 187 gacggtcaaacgttg 201
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 13 aaataagtgcagttttacactattcatctccaaagtttgatcgttcgtcttatttgaaaa 72
||||||||||||||| ||||||||| | ||| |||||| ||| |||||||||||||||
Sbjct: 231 aaataagtgcagtttcgcactattcacgttcaacgtttgaccgtccgtcttatttgaaaa 172
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 164 ttttcaaataagacggacggttaaac 189
||||||||||||||||||||| ||||
Sbjct: 79 ttttcaaataagacggacggtcaaac 54
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 149 bits (75), Expect = 2e-35
Identities = 162/192 (84%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 2 cctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgtc 61
||||||||||||||||||||||||||| |||||||||| | ||| | |||| || ||||
Sbjct: 7 cctccgtcccaaaataagtgcagttttgcactattcatgttcaacggttgactgtccgtc 66
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||| ||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 67 ttatttaaaatttttttatgattagtatttttattgctattagatgataaaacatgaata 126
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
|| ||||| |||||||| || |||||| ||||||||| ||||||||||||
Sbjct: 127 ttactttatatgtgactagatgtttttaattttttcacaaatttttc-aataagacggac 185
Query: 182 ggttaaacgttg 193
||| ||||||||
Sbjct: 186 ggtcaaacgttg 197
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 1 acctccgtcccaaaataagtgcagttttacactattcatctccaaagtttgatcgttcgt 60
|||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||| |||
Sbjct: 239 acctccgtcccaaaataagtgcagttttgcactattcacgttcaacgtttgaccgtccgt 180
Query: 61 cttatttgaaaattt 75
|||||| |||||||
Sbjct: 179 cttattgaaaaattt 165
>RF01062;MIR812;FJ032632.1/66474-66642 52545:Oryza alta
Length = 169
Score = 147 bits (74), Expect = 8e-35
Identities = 130/151 (86%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 158 gtttgaccgttcgttttatttgaaaatttgttatgattactatttttattgttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| |||||||||||||| ||||| | |||||||||
Sbjct: 98 gataaaacatgaatagtactttatgtgtgactatttttttaaaaaaaaattataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggaca 197
| |||||||||||||||| ||| |||||||
Sbjct: 38 ttaaataagacggacggtcaaatattggaca 8
>RF01062;MIR812;AACV01001613.1/49180-49352 39947:Oryza sativa
Japonica Group
Length = 173
Score = 147 bits (74), Expect = 8e-35
Identities = 130/151 (86%)
Strand = Plus / Minus
Query: 34 attcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttt 93
|||||||||||| |||||| ||||||| ||||| ||| | |||||||||||||| ||||
Sbjct: 171 attcatctccaatgtttgaccgttcgttttattcgaagaatttttatgattactgctttt 112
Query: 94 attgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaat 153
|||||||||| |||||||||||||||||||| ||||| ||||||||| |||| |
Sbjct: 111 attgttattagatgataaaacatgaatagtactttatatgtgactaatttttttaaaatt 52
Query: 154 tttcataaatttttcaaataagacggacggt 184
|||| ||||||||| ||||||||||||||||
Sbjct: 51 tttcgtaaattttttaaataagacggacggt 21
>RF01062;MIR812;AAAA02018374.1/744-916 39946:Oryza sativa Indica
Group
Length = 173
Score = 143 bits (72), Expect = 1e-33
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 143 ttatttgaaaattttttataattattatttttattgatattagatgataaaacatgaata 84
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||||||||| ||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 83 gtattttatatgtgactaaatatttttaaattttttacaaatttttcaaataagacggac 24
Query: 182 ggttaaacgttgg 194
||||||| |||||
Sbjct: 23 ggttaaatgttgg 11
>RF01062;MIR812;AC136218.2/76973-77145 39947:Oryza sativa Japonica
Group
Length = 173
Score = 143 bits (72), Expect = 1e-33
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
|||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||
Sbjct: 143 ttatttgaaaattttttatgattagtatttttattgctattagatgataaaacataaata 84
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||||| ||| |||||| ||||||||||||||||| ||||
Sbjct: 83 gtactttatgtgtgactaaatattttcaaatttttcacaaatttttcaaataagatggac 24
Query: 182 ggttaaacgttgg 194
||| |||||||||
Sbjct: 23 ggtcaaacgttgg 11
>RF01062;MIR812;AAAA02024110.1/14661-14830 39946:Oryza sativa Indica
Group
Length = 170
Score = 143 bits (72), Expect = 1e-33
Identities = 135/156 (86%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 155 gtttgaccgttcgtcttattt-aaatttttttatgattagtatttttattgctattagat 97
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct: 96 gataaaacatgaataatattt--tgtgtgactaaatatttttaaatttttcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggat 202
|||||||||||||||||| ||||||| | |||||||
Sbjct: 38 tcaaataagacggacggtcaaacgttagtcacggat 3
>RF01062;MIR812;AP002866.1/157116-157289 39947:Oryza sativa Japonica
Group
Length = 174
Score = 143 bits (72), Expect = 1e-33
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| ||||| |||||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 174 ctattcatgtccaacgtttgaccgttcgtcttatttgaaaattttttgtgattaatattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgacta 139
|||||||||||| ||||||||||||||||| || |||||| |||||||
Sbjct: 114 ttattgttattagatgataaaacatgaataatactttatgggtgacta 67
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
||||||||||||||| ||||| ||||||||||||
Sbjct: 134 ttttcaaataagacgaacggtcaaacgttggaca 167
>RF01062;MIR812;AACV01016751.1/1577-1419 39947:Oryza sativa Japonica
Group
Length = 159
Score = 141 bits (71), Expect = 5e-33
Identities = 115/132 (87%)
Strand = Plus / Minus
Query: 73 ttttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgt 132
||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 132 ttttttacgattaatatttttattgttattatatgataaaacataaatagtactttatgt 73
Query: 133 gtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacggttaaacgtt 192
|||||||| || || ||||||||||||||||||||||||||||| |||||||
Sbjct: 72 gtgactaactttttttaattttctcataaatttttcaaataagacggacggtcaaacgtt 13
Query: 193 ggacacggattt 204
||||||||||||
Sbjct: 12 ggacacggattt 1
>RF01062;MIR812;AAAA02020540.1/18625-18797 39946:Oryza sativa Indica
Group
Length = 173
Score = 141 bits (71), Expect = 5e-33
Identities = 127/148 (85%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 150 gttcggcttatttgaaatttttttatgattagtatttttattgttattagatgataaaac 91
Query: 115 atgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataa 174
|| |||| || ||||| ||||||||| ||| |||||| |||||||| ||||||
Sbjct: 90 ataaataatactttatatgtgactaaatatttttaaatttttcacaaattttttaaataa 31
Query: 175 gacggacggttaaacgttggacacggat 202
|||| ||||||||||||||| |||||||
Sbjct: 30 gacgaacggttaaacgttgggcacggat 3
>RF01062;MIR812;AAAA02029330.1/4924-4752 39946:Oryza sativa Indica
Group
Length = 173
Score = 139 bits (70), Expect = 2e-32
Identities = 126/147 (85%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 157 tttgaacgttcgtcttatttgaaaattttttatgattagtatttttattgctattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||||| ||||||| ||||||||||||||| || |||||| ||| ||||
Sbjct: 97 ttaaaacataaatagtactttatgtgtgactaaatattttcaattttttcacaaaatttt 38
Query: 168 caaataagacggacggttaaacgttgg 194
|||||||||||||| || |||||||||
Sbjct: 37 caaataagacggacagtcaaacgttgg 11
>RF01062;MIR812;AC137070.2/86863-86692 39947:Oryza sativa Japonica
Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||| |||||||||||||| |||||| |||| ||||||||||||||||| |||
Sbjct: 156 tttgaccgttcatcttatttgaaaatattttataattaatatttttattgttattagatg 97
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||||||||||| || ||||||||||||| | ||||| || |||||||||
Sbjct: 96 ataaaacatgaataatactttatgtgtgact-attttttaaaaaaaattgttaaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggat 202
|||||||||||||||| |||||||||||||||||
Sbjct: 37 taaataagacggacggtcaaacgttggacacggat 3
>RF01062;MIR812;AP008213.1/24151079-24150909 39947:Oryza sativa
Japonica Group
Length = 171
Score = 139 bits (70), Expect = 2e-32
Identities = 111/127 (87%)
Strand = Plus / Minus
Query: 73 ttttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgt 132
||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||
Sbjct: 132 ttttttatgattactatttttattgctattagatgataaaacgtgaatagtactttatgt 73
Query: 133 gtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacggttaaacgtt 192
|||||||| ||||||||||||||||||| |||||||||||||| | |||||||
Sbjct: 72 gtgactaaatattttcaaaattttcataaattttttaaataagacggacgatcaaacgtt 13
Query: 193 ggacacg 199
|| ||||
Sbjct: 12 gggcacg 6
>RF01062;MIR812;AAAA02020865.1/43524-43353 39946:Oryza sativa Indica
Group
Length = 172
Score = 137 bits (69), Expect = 8e-32
Identities = 120/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
|||||||||||||||| |||| ||||||| |||| ||||||||||||||||| |||||||
Sbjct: 152 atcgttcgtcttatttaaaaaatttttataattaatatttttattgttattagatgataa 93
Query: 112 aacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaa 171
||||||||||||| ||||||||||||| | ||||| |||||||||||||||||
Sbjct: 92 aacatgaatagtaatttatgtgtgact-attttttaaaaaaaattcataaatttttcaaa 34
Query: 172 taagacggacggttaaac 189
||||||| |||||||||
Sbjct: 33 taagacgagcggttaaac 16
>RF01062;MIR812;AAAA02004279.1/45936-45765 39946:Oryza sativa Indica
Group
Length = 172
Score = 137 bits (69), Expect = 8e-32
Identities = 126/146 (86%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||| |||||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 150 cgttcgttttatttgaaaattttttatgattagtgtttttattgctattagatgataaaa 91
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|| ||||||||||||||||||| ||| | ||||||||||||||| |||||
Sbjct: 90 tattaatagtattttatgtgtgattaaatatttt-cattttttcataaattttttaaata 32
Query: 174 agacggacggttaaacgttggacacg 199
||||||||||||||||||||||||||
Sbjct: 31 agacggacggttaaacgttggacacg 6
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||| ||| ||||||||||||||
Sbjct: 132 ttttcaaataaaacgaacggttaaacgttg 161
>RF01062;MIR812;AAAA02020594.1/5764-5601 39946:Oryza sativa Indica
Group
Length = 164
Score = 137 bits (69), Expect = 8e-32
Identities = 116/134 (86%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 153 gtttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagat 94
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| ||||||||||||||| || | |||| |||||||||
Sbjct: 93 gataaaacatgaatagtactttatgtgtgactaatttttttaatattttttataaatttt 34
Query: 167 tcaaataagacgga 180
||||||||||||||
Sbjct: 33 tcaaataagacgga 20
>RF01062;MIR812;AP004165.3/53439-53268 39947:Oryza sativa Japonica
Group
Length = 172
Score = 137 bits (69), Expect = 8e-32
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
|||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||
Sbjct: 149 gttcatcttatttgaaatatttttatgattaatatttttattgttattagataataaaac 90
Query: 115 atgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataa 174
|||||||||| ||||||||| ||| | ||| |||| ||||| |||||||||||
Sbjct: 89 atgaatagtactttatgtgtaact-attttttaaaatttttttataaacttttcaaataa 31
Query: 175 gacggacggttaaacgttggacacggattt 204
|||||||||||||||||||||||||||||
Sbjct: 30 aacggacggttaaacgttggacacggattt 1
>RF01062;MIR812;AAAA02022475.1/22256-22085 39946:Oryza sativa Indica
Group
Length = 172
Score = 137 bits (69), Expect = 8e-32
Identities = 113/130 (86%)
Strand = Plus / Minus
Query: 73 ttttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgt 132
||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 132 ttttttatgattagtatttttattgctattagatgataaaacatgaatagtactttatgt 73
Query: 133 gtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacggttaaacgtt 192
|||||||| ||| |||||| ||||||||||||||||||||||||| |||||||
Sbjct: 72 gtgactaaatgttttcaaatttttcacaaatttttcaaataagacggacggtcaaacgtt 13
Query: 193 ggacacggat 202
| |||||||
Sbjct: 12 gagcacggat 3
>RF01062;MIR812;AACV01004255.1/9861-10031 39947:Oryza sativa
Japonica Group
Length = 171
Score = 137 bits (69), Expect = 8e-32
Identities = 138/162 (85%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||| | |||| ||||||||||||| ||||||||||||| |||||||||| |||
Sbjct: 162 tccaacgtttaaccgtttgtcttatttgaaatttttttatgattagtatttttattatta 103
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcata 160
||| |||||||||||||||||||| |||||||||||||| || |||| |||
Sbjct: 102 ttagatgataaaacatgaatagtactttatgtgtgacta--tttttttaatttttttata 45
Query: 161 aatttttcaaataagacggacggttaaacgttggacacggat 202
|||||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 44 aatttttcaaataagacgaacggtcaaatgttggacacggat 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggac 196
||||||||||||| |||||||||||||||||
Sbjct: 132 tttcaaataagacaaacggttaaacgttggac 163
>RF01062;MIR812;AACV01019813.1/5059-4888 39947:Oryza sativa Japonica
Group
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 133/157 (84%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||
Sbjct: 158 gtttgaccgtttatcttatttgaaaactttttacgattaatatttttattgttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| |||| ||| |||||| ||| || |||||||||||
Sbjct: 98 gataaaacatgaatagtactttacgtgcgactaacttttttaaattttctcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
|||||||| |||||| || |||||||| |||||||||
Sbjct: 38 tcaaataaaacggacagtcaaacgttgaacacggatt 2
>RF01062;MIR812;AAAA02007524.1/33468-33642 39946:Oryza sativa Indica
Group
Length = 175
Score = 135 bits (68), Expect = 3e-31
Identities = 127/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 59 gtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatga 118
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 148 gtcttatttgaaaaaaaattatgattactatttttattgttattagatgataaaacatga 89
Query: 119 atagtattttatgtgtgacta--annnnnnnaaaaattttcataaatttttcaaataaga 176
|||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 88 atagtactttatgtgtgactagtttttttaaaaaaaaaatcataaatttttcaaataaga 29
Query: 177 cggacggttaaacgttggacacggattt 204
|||| ||| |||||||||||||||||||
Sbjct: 28 cggatggtcaaacgttggacacggattt 1
>RF01062;MIR812;AAAA02012868.1/4891-5054 39946:Oryza sativa Indica
Group
Length = 164
Score = 135 bits (68), Expect = 3e-31
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cgttcatcttatttaaaaaaattttatgattactatttttattgttattacatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
||||||| || || || ||||||||| ||| ||||||||| ||||| |||||
Sbjct: 91 tatgaataatacttaatatgtgactaaatattttcaaatttttcataatttttttaaata 32
Query: 174 agacggacggttaaacgttggacacggat 202
||||||| ||| |||||||||||||||||
Sbjct: 31 agacggatggtcaaacgttggacacggat 3
>RF01062;MIR812;AC092390.3/19416-19244 4530:Oryza sativa (rice)
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 145/173 (83%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||| |||||||| | ||||||||||||||||||| |||| |||||||||| |||||
Sbjct: 173 ctatttatctccaacgattgatcgttcgtcttatttaaaaaagttttatgattgatattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|| ||||||||| |||| |||| |||||| ||| ||||||||||||||| ||||
Sbjct: 113 ttgttgttattagatgacaaaatatgaatggtactttatgtgtgactaaattttttaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|||| |||||||||| |||||||||| ||||| ||| |||| ||||||||||
Sbjct: 53 ttttttataaattttttaaataagacgaacggtcaaaagttgaacacggattt 1
>RF01062;MIR812;AP008209.1/6599969-6599799 39947:Oryza sativa
Japonica Group
Length = 171
Score = 135 bits (68), Expect = 3e-31
Identities = 147/173 (84%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||| |||||||| |||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 171 ctatttatctccaacgtttgaccgttcgtcttatttgaat-ttttttataattactattt 113
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| ||||||||||||| ||| || |||||||| | |||| |||
Sbjct: 112 ttattgttattagatgataaaacatgtataatactttatgtg-ggctaatttttttaaag 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
| |||||||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 53 aaaatcataaattttttaaataagacggacggtcaaacgttggacacgaattt 1
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 166 ttcaaataagacggacggttaaacgttgga 195
||||||||||||| ||||| ||||||||||
Sbjct: 133 ttcaaataagacgaacggtcaaacgttgga 162
>RF01062;MIR812;AC125471.3/27700-27871 39947:Oryza sativa Japonica
Group
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 128/149 (85%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||| |||| ||||||||||| |||||| ||||||| || |||||||||
Sbjct: 150 cgttcgtcttatttaaaaaaattttatgattagtatttt-attgttactagatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
||||||||||||||||||||||| ||| ||| |||||| |||||||| |||||
Sbjct: 91 catgaatagtattttatgtgtgattaaatatttttaaatttttcacaaattttttaaata 32
Query: 174 agacggacggttaaacgttggacacggat 202
||||||||||||||| ||||| |||||||
Sbjct: 31 agacggacggttaaatgttgggcacggat 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttg 193
||||| |||||||||| ||||||||||||||
Sbjct: 131 ttttttaaataagacgaacggttaaacgttg 161
>RF01062;MIR812;AACV01010642.1/16635-16808 39947:Oryza sativa
Japonica Group
Length = 174
Score = 135 bits (68), Expect = 3e-31
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 159 gtttgaccgttcgtcttatttgaaaattttttatgattattatttttattgctattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgact-aannnnnnnaaaaattttcataaattt 165
|||||||||| ||||||| |||||| || ||| || ||| |||||| |||| |
Sbjct: 99 gataaaacataaatagtactttatgcgtaactaaatattttttaaatttttcacaaatat 40
Query: 166 ttcaaataagacggacggttaaacgttggacacggat 202
|| ||||||||||||| || |||||||||||||||||
Sbjct: 39 tttaaataagacggacagtcaaacgttggacacggat 3
>RF01062;MIR812;AAAA02027536.1/9526-9700 39946:Oryza sativa Indica
Group
Length = 175
Score = 133 bits (67), Expect = 1e-30
Identities = 130/151 (86%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgat-aaaa 113
|||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||
Sbjct: 149 gttcgtcttatttgaaaattttttataattactatttttattattattagatgataaaaa 90
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|||||||| || ||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 89 catgaataatactttatgtatgactagtttttttaaaaattttcataaa--tttcaaata 32
Query: 174 agacggacggttaaacgttggacacggattt 204
| ||| |||||||||| || |||||||||||
Sbjct: 31 aaacgaacggttaaacattagacacggattt 1
>RF01062;MIR812;AAAA02019495.1/10640-10812 39946:Oryza sativa Indica
Group
Length = 173
Score = 133 bits (67), Expect = 1e-30
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgatcgttcgtcttatttaaaatttttttatgattattatttttattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||| ||||||| |||||||||||||||||| || |||| | |||||||
Sbjct: 98 tataaaatatgaataatattttatgtgtgactaaatatttttaatttttttacaaatttt 39
Query: 167 tcaaataagacggacggttaaacgttgg 194
|||||||||||||||| | |||||||||
Sbjct: 38 tcaaataagacggacgatcaaacgttgg 11
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 ccaaagtttgatcgttcgtcttatttgaaaa 72
|||| |||||||||| |||||||||||||||
Sbjct: 11 ccaacgtttgatcgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02018571.1/22731-22903 39946:Oryza sativa Indica
Group
Length = 173
Score = 133 bits (67), Expect = 1e-30
Identities = 132/156 (84%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||| ||||||||||| |||||||||||| |||||||||| ||||| ||
Sbjct: 158 gtttgaccgttcgttttatttgaaaactttttatgattaatatttttattactattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||||| |||||||| |||||| ||| |||| |||||||||
Sbjct: 98 cataaaacatgaatagtactttatgtgcgactaaatatttttaaattttttataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggat 202
| |||||||||||||||| |||| ||| ||||||||
Sbjct: 38 ttaaataagacggacggtcaaacattgaacacggat 3
>RF01062;MIR812;AP003512.3/72419-72259 39947:Oryza sativa Japonica
Group
Length = 161
Score = 133 bits (67), Expect = 1e-30
Identities = 132/156 (84%), Gaps = 12/156 (7%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||
Sbjct: 145 tttgatcgttcgtcttatttgaaatcttttgatgattaatatttttattgttattagatg 86
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||||||||||| || ||||||||||| | |||||| ||||||||||
Sbjct: 85 ataaaacatgaataatactttatgtgtgatt------------aatttttataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggatt 203
|||||||||||||| || |||||||||||| |||||
Sbjct: 37 caaataagacggacagtcaaacgttggacatggatt 2
>RF01062;MIR812;AACV01020402.1/13913-13776 39947:Oryza sativa
Japonica Group
Length = 138
Score = 133 bits (67), Expect = 1e-30
Identities = 82/87 (94%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 134 cgttagtcttatttgaaaattttttatgattagtatttttgttgttattagatgataaaa 75
Query: 114 catgaatagtattttatgtgtgactaa 140
||||||||||||||||||||||||||
Sbjct: 74 tatgaatagtattttatgtgtgactaa 48
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 133 bits (67), Expect = 1e-30
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaatttttt-atgattactatttttattgttattaca 105
|||||| ||| ||||||||||||||||||||| | ||||| ||||||| ||||||||| |
Sbjct: 159 gtttgaccgtccgtcttatttgaaaatttttttacgattagtatttttgttgttattaga 100
Query: 106 tgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattt 165
||||||||||||||||||| ||||||||||||| | ||| |||||||||| |
Sbjct: 99 tgataaaacatgaatagtactttatgtgtgacttaatttttaaaattgtttcataaatct 40
Query: 166 ttcaaataagacggacggttaaacgttggacacgga 201
||||||||||||||| ||| |||| |||||||||||
Sbjct: 39 ttcaaataagacggatggtcaaacattggacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgtt 192
||||||||||||||||||||| |||||||
Sbjct: 134 ttttcaaataagacggacggtcaaacgtt 162
>RF01062;MIR812;AP003517.3/28178-28350 39947:Oryza sativa Japonica
Group
Length = 173
Score = 133 bits (67), Expect = 1e-30
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||| ||||||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgaccgttcgtcttgtttgaaatttttttatgattagtatttttattgctattaaat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||| || ||||||||||||||| ||| |||| |||||||||
Sbjct: 98 aataaaacatgaataatactttatgtgtgactaaatatttttaaattttttataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttgg 194
|||||||| ||||||||| ||| |||||
Sbjct: 38 tcaaataaaacggacggtcaaatgttgg 11
>RF01062;MIR812;AP005493.3/5146-5314 39947:Oryza sativa Japonica
Group
Length = 169
Score = 133 bits (67), Expect = 1e-30
Identities = 82/87 (94%)
Strand = Plus / Minus
Query: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
|||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 151 atcgttcgtcttatttgaaatttttttatgattagtatttctattgttattagatgataa 92
Query: 112 aacatgaatagtattttatgtgtgact 138
||||||||||||| |||||||||||||
Sbjct: 91 aacatgaatagtactttatgtgtgact 65
>RF01062;MIR812;AAAA02027581.1/1070-897 39946:Oryza sativa Indica
Group
Length = 174
Score = 133 bits (67), Expect = 1e-30
Identities = 127/148 (85%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattacta-tttttattgttattaca 105
|||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||| |
Sbjct: 159 gtttgaccgttcgtcttatttgaaaattttttatgattagtattttttattgctattaga 100
Query: 106 tgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattt 165
|||||||| |||||||||| ||||||||||||||| || |||||||||||||
Sbjct: 99 tgataaaatatgaatagtactttatgtgtgactaaatatttttaattttttcataaattt 40
Query: 166 ttcaaataagacggacggttaaacgttg 193
|| |||||||| |||| || ||||||||
Sbjct: 39 tttaaataagatggacagtcaaacgttg 12
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||| ||||| ||||||||
Sbjct: 134 ttttcaaataagacgaacggtcaaacgttg 163
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 133 bits (67), Expect = 1e-30
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
|||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 54 atcgttcgtcttatttgaaatttttttatgattagtatttctattgttattagatgataa 113
Query: 112 aacatgaatagtattttatgtgtgact 138
||||||||||||| |||||||||||||
Sbjct: 114 aacatgaatagtactttatgtgtgact 140
>RF01062;MIR812;AACV01010207.1/458-630 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| || ||||||||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgaccgttcgtcttatttaaattttttttatgattagtatttttattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| || ||||||||| ||||| |||| |||||| |||||||
Sbjct: 98 gataaaacatgaataatactttatgtgtaactaaatattttaaaatttttcacaaatttt 39
Query: 167 tcaaataagacggacggttaaac 189
||||||||||| || ||||||||
Sbjct: 38 tcaaataagacagatggttaaac 16
>RF01062;MIR812;AAAA02017371.1/5690-5849 39946:Oryza sativa Indica
Group
Length = 160
Score = 131 bits (66), Expect = 5e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 43 caaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttatt 102
|||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 149 caaagtttgaccgttcgtcttatttaaaaattttttatgattagtatttttattgctatg 90
Query: 103 acatgataaaacatgaatagtattttatgtgtgactaa 140
| |||||||||||| ||||||| |||||||||||||||
Sbjct: 89 agatgataaaacataaatagtaatttatgtgtgactaa 52
>RF01062;MIR812;AAAA02027210.1/812-640 39946:Oryza sativa Indica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 151 cgttcgtcttatttgaattttttttatgattagtatttttattgctattagatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
||||||||||| |||||||| |||||| | |||||| ||||||||||||||
Sbjct: 91 catgaatagtactttatgtgcgactaaatatttttatttttttcacaaatttttcaaata 32
Query: 174 agacggacggttaaacgttggac 196
||| ||||||| |||||||||||
Sbjct: 31 agatggacggtcaaacgttggac 9
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 ttcaaataagacggacggttaaacgttg 193
||||||||||||| ||||||||||||||
Sbjct: 135 ttcaaataagacgaacggttaaacgttg 162
>RF01062;MIR812;AACV01011508.1/866-1027 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 5e-30
Identities = 96/106 (90%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
|||||||| || |||||| ||||||||||||||||||||||| | || ||| ||||||||
Sbjct: 159 ttcatctctaacgtttgaccgttcgtcttatttgaaaattttctgtggttagtattttta 100
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
||||||||| ||||||| ||||||||||||||||||||| ||||||
Sbjct: 99 ttgttattagatgataatacatgaatagtattttatgtgcgactaa 54
>RF01062;MIR812;AAAA02038713.1/1148-1318 39946:Oryza sativa Indica
Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
|||||||||||| | ||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 143 tcttatttgaaattattttatgattagtatttgtattgttattagatgataaaacatgaa 84
Query: 120 tagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacgg 179
||||||||||||||||||||| ||| | ||||||| ||||| ||||||||||
Sbjct: 83 tagtattttatgtgtgactaatttttt--aaattcttcataagttttttaaataagacga 26
Query: 180 acggttaaacgttggacacggat 202
||| ||||| |||||||||||||
Sbjct: 25 acgattaaatgttggacacggat 3
>RF01062;MIR812;AP008210.1/12101104-12100931 39947:Oryza sativa
Japonica Group
Length = 174
Score = 131 bits (66), Expect = 5e-30
Identities = 78/82 (95%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 151 gttcgtcttatttgaaatttttttatgattagtatttttattgttattaaatgataaaac 92
Query: 115 atgaatagtattttatgtgtga 136
|||||||||| |||||||||||
Sbjct: 91 atgaatagtactttatgtgtga 70
>RF01062;MIR812;AP008215.1/17538737-17538909 39947:Oryza sativa
Japonica Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 143/171 (83%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||| ||||| |||||| | ||||| |||||||||| ||||||||||||| |||||
Sbjct: 173 ctattcacgtccaacgtttgaccattcgttttatttgaaatttttttatgattagtattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| ||||||||||||||||| |||||| ||||||||| | |
Sbjct: 113 ttattgttattagatgataaaacatgaataatattttttgtgtgacttattatttttatt 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggat 202
||||| |||||||||| | |||||||||||||| ||| ||||||||||||
Sbjct: 53 atttttataaattttttatataagacggacggtcaaatattggacacggat 3
>RF01062;MIR812;AACV01008082.1/25543-25371 39947:Oryza sativa
Japonica Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 131/155 (84%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||| ||||||||||| ||||| || |||| ||||||||||||||||| |||
Sbjct: 157 tttgaccgttcatcttatttgaatttttttaataattagtatttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||| || |||||| || |||||||| |||||
Sbjct: 97 ataaaacatgaatagtactttatatgggactaatttttttcaattttttcatattttttt 38
Query: 168 caaataagacggacggttaaacgttggacacggat 202
||||||||||||||||| |||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttggacacggat 3
>RF01062;MIR812;AP008213.1/27685317-27685488 39947:Oryza sativa
Japonica Group
Length = 172
Score = 131 bits (66), Expect = 5e-30
Identities = 138/163 (84%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||| ||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 163 tccaacgtttgaccgtttatcttatttgaaaattttgtatgtttactacttttattgtta 104
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcata 160
||| |||||||||||||||||||| ||||||||||||| | || |||| |||
Sbjct: 103 ttaaatgataaaacatgaatagtactttatgtgtgact-atttttttaattttttttata 45
Query: 161 aatttttcaaataagacggacggttaaacgttggacacggatt 203
||| ||| |||||||||||||| | ||||||||||||||||||
Sbjct: 44 aatattttaaataagacggacgatcaaacgttggacacggatt 2
>RF01062;MIR812;AACV01006398.1/10019-9855 39947:Oryza sativa
Japonica Group
Length = 165
Score = 131 bits (66), Expect = 5e-30
Identities = 87/94 (92%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 148 gtttgaccgttcgtcttatttgaaatttttttatgattagtatttttattgctattagat 89
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||| ||||||| |||||||||||||||
Sbjct: 88 gataaaacattaatagtactttatgtgtgactaa 55
>RF01062;MIR812;AACV01004704.1/18959-18788 39947:Oryza sativa
Japonica Group
Length = 172
Score = 131 bits (66), Expect = 5e-30
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||||| |||||||| |||| ||||||||||||| ||| |||||||||||||
Sbjct: 146 cgtcttatttgaaatttttttataattagtatttttattgttgttagatgataaaacatg 87
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 86 aatagtactttatgtatgactaatttttttcaaatttttcataaatttttcaaataagac 27
Query: 178 ggacggt 184
| |||||
Sbjct: 26 gaacggt 20
>RF01062;MIR812;AACV01016077.1/12148-12316 39947:Oryza sativa
Japonica Group
Length = 169
Score = 131 bits (66), Expect = 5e-30
Identities = 137/163 (84%)
Strand = Plus / Minus
Query: 42 ccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttat 101
|||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 163 ccaacgtttgatcgttcgtcttatttaaaaaaaaattatgattactatttttattgttat 104
Query: 102 tacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataa 161
|| |||||||||||| || |||| ||||||| |||||| ||| |||||||||
Sbjct: 103 tagatgataaaacataaaaagtactttatgtatgactattttttttaaattttttcataa 44
Query: 162 atttttcaaataagacggacggttaaacgttggacacggattt 204
|||||| ||||||||||||| || ||| ||||||||||||||
Sbjct: 43 attttttaaataagacggacagtaaaatattggacacggattt 1
>RF01062;MIR812;AACV01013166.1/3571-3410 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 80/85 (94%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 138 ttcgtcttatttgaaatttttttatgattagtatttttattgttattagatgataaaata 79
Query: 116 tgaatagtattttatgtgtgactaa 140
||||||||| |||||||||||||||
Sbjct: 78 tgaatagtaatttatgtgtgactaa 54
>RF01062;MIR812;AACV01012794.1/451-282 39947:Oryza sativa Japonica
Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 122/142 (85%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
|||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 142 tcttatttgaaatttttttatgattagtatttttattgttattaaatgataaaacatgaa 83
Query: 120 tagtattttatgtgtgacta-annnnnnnaaaaattttcataaatttttcaaataagacg 178
||||| |||||||||||||| ||| ||||||||||||||| |||||| |||
Sbjct: 82 tagtactttatgtgtgactatttttttttcaaatttttcataaattttttaaataaaacg 23
Query: 179 gacggttaaacgttggacacgg 200
||||| |||||| ||||||||
Sbjct: 22 aacggtcaaacgtcggacacgg 1
>RF01062;MIR812;AAAA02000668.1/58953-58791 39946:Oryza sativa Indica
Group
Length = 163
Score = 127 bits (64), Expect = 8e-29
Identities = 131/153 (85%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 151 gtttgattgttcgtcttatttaaaaaaaaattatgattactatttttattgttattagat 92
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaat-tttcataaattt 165
|||||||||||||||||| |||| ||||||||| |||||| |||||||||||
Sbjct: 91 gataaaacatgaatagtactttacgtgtgacta--cttttaaaaaataattcataaattt 34
Query: 166 ttcaaataagacggacggttaaacgttggacac 198
||||||||| ||||||||| |||| ||||||||
Sbjct: 33 ttcaaataaaacggacggtcaaacattggacac 1
>RF01062;MIR812;AP008213.1/17875116-17874944 39947:Oryza sativa
Japonica Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||| |
Sbjct: 158 gtttgaccgttcgtcttatttgaaaactttttacaattaatatttttattgttattaggt 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||| ||| |||||||| |||||| || || ||||||| |||
Sbjct: 98 gataaaacatgaattgtactttatgtgcgactaactttttttaattttctcataaaattt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
||||||||||||||| | ||||||||||||||||||
Sbjct: 38 tcaaataagacggacaatcaaacgttggacacggatt 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| ||||||| || |||||||||||||||||||
Sbjct: 10 tccaacgtttgattgtccgtcttatttgaaaatttt 45
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
||||||||||||||| ||||| ||||||| ||||
Sbjct: 133 ttttcaaataagacgaacggtcaaacgttagaca 166
>RF01062;MIR812;AACV01018474.1/6266-6092 39947:Oryza sativa Japonica
Group
Length = 175
Score = 127 bits (64), Expect = 8e-29
Identities = 118/137 (86%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
|||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 147 tcttatttgaaatttttttatgattactatttttatttttattagatgataaaacatgaa 88
Query: 120 tagta-ttttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacg 178
||||| |||||| ||||| | | |||||||||||||| |||||||| |||||||
Sbjct: 87 tagtatttttatatgtgattcattttttaaaaaattttcataattttttcaactaagacg 28
Query: 179 gacggttaaacgttgga 195
||||| ||||| ||||
Sbjct: 27 aacggtcaaacgctgga 11
>RF01062;MIR812;AC144737.2/50271-50443 39947:Oryza sativa Japonica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 129/153 (84%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||| |||| |||| |||||||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgaccgttcgtctcatttaaaaaatttttatgattagtatttttattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||| |||||||| |||| |||||||||| ||| |||||| ||| |||
Sbjct: 98 aataaaacttgaatagttctttacgtgtgactaaatatttttaaatttttcacaaaattt 39
Query: 167 tcaaataagacggacggttaaacgttggacacg 199
|||||||||||||||||| ||||||||||||||
Sbjct: 38 tcaaataagacggacggtcaaacgttggacacg 6
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||| ||| |||||||||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaaaatttt 45
>RF01062;MIR812;AP005163.3/84135-84299 39947:Oryza sativa Japonica
Group
Length = 165
Score = 127 bits (64), Expect = 8e-29
Identities = 138/165 (83%), Gaps = 8/165 (4%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 162 ttcatgtccaatatttgatcgttcgttttatttgaagtttttttatgattagtattttta 103
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
||||||||| ||||||||||||||||| || ||||||| ||||||| ||
Sbjct: 102 ttgttattagatgataaaacatgaatattactttatgtctgactaatttt--------tt 51
Query: 155 ttcataaatttttcaaataagacggacggttaaacgttggacacg 199
|||||| ||||||||||||||||||||| | |||||||| |||||
Sbjct: 50 ttcatatatttttcaaataagacggacgatcaaacgttgaacacg 6
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaa 72
|||||||||| |||||||||||||||
Sbjct: 16 gtttgatcgtccgtcttatttgaaaa 41
>RF01062;MIR812;AACV01010381.1/10569-10391 39947:Oryza sativa
Japonica Group
Length = 179
Score = 127 bits (64), Expect = 8e-29
Identities = 138/165 (83%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||| ||||| || ||| |||||| ||||||| ||| |||| |||||||| |||||
Sbjct: 179 ctattcacgtccaacgtgtgaccgttcgccttatttaaaatttttctatgattagtattt 120
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
||||||||| || ||||||||| || ||| |||||||||||| |||||| |||
Sbjct: 119 ttattgttagtagatgataaaatataaatggtattttatgtgcgactaaattttttaaat 60
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggac 196
||||||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 59 attttcataaaattttcaaataagacggacgatcaaacgttggac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||||||| |||||||||||||||||||
Sbjct: 16 tccaacgtttgatcgtccgtcttatttgaaaatttt 51
>RF01062;MIR812;AL662944.3/116257-116430 39947:Oryza sativa Japonica
Group
Length = 174
Score = 127 bits (64), Expect = 8e-29
Identities = 121/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 59 gtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatga 118
|||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 147 gtcttatttgaaaaagttttatgattattatttttgttgttattagatgataaaacatga 88
Query: 119 atagtattttatgtgtgactaannnnnnnaa-aaattttcataaatttttcaaataagac 177
||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 87 atagtattttatgtgtgactagcatttttaattttttttcataaatttttcaaataagat 28
Query: 178 ggacggttaaacgttggacac 198
| ||||| |||||||||||||
Sbjct: 27 gcacggtcaaacgttggacac 7
>RF01062;MIR812;AP008207.1/7388120-7387948 39947:Oryza sativa
Japonica Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 132/153 (86%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattt-tttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 157 tttgattgttcgtcttatttgaaaaaaaatttatgattactatttttattgttattagat 98
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaat-tttcataaattt 165
|||||||||| ||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 97 gataaaacataaatagtactttatgtgtgacta--tttttaaaaaataattcataaattt 40
Query: 166 ttcaaataagacggacggttaaacgttggacac 198
||||||||||||||||||| || | ||||||||
Sbjct: 39 ttcaaataagacggacggtcaagcattggacac 7
>RF01062;MIR812;AACV01025273.1/3037-2868 39947:Oryza sativa Japonica
Group
Length = 170
Score = 127 bits (64), Expect = 8e-29
Identities = 98/108 (90%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 33 tattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttt 92
||||||| || || |||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 169 tattcatgtctaatgtttgatcgttcgttttatttgaaaattttt-atgattagtatttt 111
Query: 93 tattgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
| ||||||||| |||||||||||||||||||| ||||||| |||||||
Sbjct: 110 tgttgttattagatgataaaacatgaatagtactttatgtatgactaa 63
>RF01062;MIR812;AC051633.7/116553-116379 4530:Oryza sativa (rice)
Length = 175
Score = 127 bits (64), Expect = 8e-29
Identities = 91/100 (91%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||||||||||||||||| | ||||||||||| |||||||||| |||
Sbjct: 166 tccaacgtttgaccgttcgtcttatttgaaattcttttatgattagtatttttattatta 107
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaa 140
||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 106 ttagatgataaaacatgaatagtactttatgtgcgactaa 67
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggac 196
|||||||||||||| ||||| |||||||||||
Sbjct: 136 tttcaaataagacgaacggtcaaacgttggac 167
>RF01062;MIR812;AACV01015179.1/5893-5722 39947:Oryza sativa Japonica
Group
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 133/157 (84%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||| |||
Sbjct: 156 tttgaccgttcgtcttatttataatttttttacgattaatatttttattgttattagatg 97
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||| | ||||||| || || ||||||||||||
Sbjct: 96 ataaaacatgaatagtactttatatttgactaatttattctaattttctcataaattttt 37
Query: 168 caaataagacggacggttaaacgttggacacggattt 204
||||||||| |||||| |||||||||||||||||||
Sbjct: 36 -aaataagacagacggtgaaacgttggacacggattt 1
>RF01062;MIR812;AC112209.4/58229-58057 39947:Oryza sativa Japonica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||| || ||||||| ||||| |||||||||| |||||| ||
Sbjct: 158 gtttgaccgttcgtcttatttgtaatttttttacgattaatatttttatttttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||| |||||||| | || |||||||||||| || || |||||||||||
Sbjct: 98 gataaaatatgaatagcacttcatgtgtgactaatttattttaattttctcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
|||||||||||||||||| |||||| ||||||||||
Sbjct: 38 tcaaataagacggacggtcaaacgtcagacacggatt 2
>RF01062;MIR812;AACV01015697.1/47017-46844 39947:Oryza sativa
Japonica Group
Length = 174
Score = 125 bits (63), Expect = 3e-28
Identities = 144/172 (83%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| | ||| |||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 174 ctattcatgttcaacgtttgaccgtttgtcttatttgaaaattttttatgattagtattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgact-aannnnnnnaaa 150
|||| |||| ||||||||||||||||| || ||||||||||||| || |||
Sbjct: 114 ttatgccaattagatgataaaacatgaatattactttatgtgtgactaaatattttcaaa 55
Query: 151 aattttcataaatttttcaaataagacggacggttaaacgttggacacggat 202
| |||| | ||| ||||||||||||||||||||| ||| ||||| |||||||
Sbjct: 54 atttttaacaaaattttcaaataagacggacggtcaaatgttgggcacggat 3
>RF01062;MIR812;AAAA02035158.1/27030-27199 39946:Oryza sativa Indica
Group
Length = 170
Score = 125 bits (63), Expect = 3e-28
Identities = 97/107 (90%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 33 tattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttt 92
||||||| ||||| | |||| | |||||||||||| ||| ||||||||||||||||||||
Sbjct: 169 tattcatgtccaacggttgaccattcgtcttattttaaa-ttttttatgattactatttt 111
Query: 93 tattgttattacatgataaaacatgaatagtattttatgtgtgacta 139
||||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 110 tattgttattagatgataaaacatgaatagtactttatgtatgacta 64
>RF01062;MIR812;AP004989.3/37084-37251 39947:Oryza sativa Japonica
Group
Length = 168
Score = 125 bits (63), Expect = 3e-28
Identities = 145/173 (83%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||| |||| ||| |||||| |||||||||||||| |||||||| ||||||| ||
Sbjct: 168 ctatttatcttcaacgtttgaccgttcgtcttattt---aattttttt--attactaatt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| |||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 113 ttattgttattagatgataaagtatgaatagtactttatgtgtgactaatttattaaaaa 54
Query: 152 attttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
| |||||||| |||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 53 aaattcataaaatttttaaataagacgaacggtcaaacgttggacacggattt 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||| |||||||||||||| ||||||||
Sbjct: 10 tccaacgtttgaccgttcgtcttatttaaaaatttt 45
>RF01062;MIR812;AP008215.1/9852035-9851863 39947:Oryza sativa
Japonica Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 131/156 (83%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| || |||||||||| ||||||||||||| ||||||||| |||||| ||
Sbjct: 158 gtttgaccgttagttttatttgaaatttttttatgattagcatttttattattattaaat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| || |||||||||||||| || |||| ||||||||
Sbjct: 98 gataaaacatgaataatactttatgtgtgactatttttttataattttttgttaaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggat 202
|||||||||| |||||||||||||||||||| ||||
Sbjct: 38 tcaaataagatggacggttaaacgttggacatggat 3
>RF01062;MIR812;AACV01024311.1/12955-12785 39947:Oryza sativa
Japonica Group
Length = 171
Score = 125 bits (63), Expect = 3e-28
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||| |||
Sbjct: 155 tttgatcattcgtcttatttgaaatttttttataattagtatttttattgttattagatg 96
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
|||||| ||||||| ||||||||||||||||
Sbjct: 95 ataaaatatgaatattattttatgtgtgact 65
>RF01062;MIR812;AACV01013958.1/11174-11347 39947:Oryza sativa
Japonica Group
Length = 174
Score = 125 bits (63), Expect = 3e-28
Identities = 144/172 (83%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| ||||| ||||| |||||||||||||| ||| ||| ||||| |||||
Sbjct: 174 ctattcatgtccaacgtttgtccgttcgtcttatttagaaaaagattacgattagtattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 114 ttattgttattaaatgataaaacatgaatagtattttatgtgtgactattttttttaata 55
Query: 152 attttcataaatttttcaaataagacggacggt-taaacgttggacacggat 202
|||||||||||||||||||||||| ||| ||| |||||||| ||||||||
Sbjct: 54 tttttcataaatttttcaaataagatggatggtcaaaacgttgaacacggat 3
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 147 cgtcttatttgaaatatttttatgattagtatttttattgttattagatgataaaatatg 88
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
||||||| |||||| |||||| | || ||||||||||||||||||||||||
Sbjct: 87 aatagtactttatgcgtgacttaacttttcaatttttttcataaatttttcaaataagat 28
Query: 178 ggacggttaaacgttggacacgga 201
|||| || ||||||||| ||||||
Sbjct: 27 ggacagtcaaacgttgggcacgga 4
>RF01062;MIR812;AC133334.8/22904-23076 39947:Oryza sativa Japonica
Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 125/148 (84%)
Strand = Plus / Minus
Query: 57 tcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacat 116
||||||||||||||| |||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 148 tcgtcttatttgaaatttttctatgattagtatttttattgttagtagatgataaaacat 89
Query: 117 gaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataaga 176
||||||||||||||||||||||| || ||||||||||| ||||| |||||||
Sbjct: 88 aaatagtattttatgtgtgactaactttttttaatattttcataaaattttcgaataaga 29
Query: 177 cggacggttaaacgttggacacggattt 204
|| ||| | |||| || |||| ||||||
Sbjct: 28 cgaacgatcaaaccttcgacatggattt 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaatttt 76
|||||||||||||||||||| |||||||||
Sbjct: 16 gtttgatcgttcgtcttattcgaaaatttt 45
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggac 196
|||||||||||||| ||||||||||||||||
Sbjct: 134 tttcaaataagacgagcggttaaacgttggac 165
>RF01062;MIR812;AP008207.1/37699419-37699593 39947:Oryza sativa
Japonica Group
Length = 175
Score = 125 bits (63), Expect = 3e-28
Identities = 146/175 (83%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| |||||| || |||||||| |||||||||||||||||||||||
Sbjct: 175 ctattcatctccaacgtttgacttatcatcttatttcaaaattttttatgattactattt 116
Query: 92 ttattgttattacatg--ataaaacatgaatagtattttatgtgtgactaannnnnnnaa 149
|| ||||||||| ||| |||||| || ||||||| ||||||| ||| ||| ||
Sbjct: 115 ttgttgttattagatgatataaaatataaatagtactttatgtatgattaatttttttaa 56
Query: 150 aaattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|| ||||||| ||||||| |||||||||| ||||| |||| ||||||||||||||
Sbjct: 55 aatttttcatgaattttttaaataagacgtacggtcaaacattggacacggattt 1
>RF01062;MIR812;AAAA02015747.1/13525-13343 39946:Oryza sativa Indica
Group
Length = 183
Score = 125 bits (63), Expect = 3e-28
Identities = 94/103 (91%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| ||||| |||||| |||||||||||||||||| |||||||||||| |||||
Sbjct: 183 ctattcatgtccaatgtttgactgttcgtcttatttgaaaactttttatgattaatattt 124
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgt 134
| |||||||||| |||||||||||||||||||| |||||||||
Sbjct: 123 t-attgttattagatgataaaacatgaatagtactttatgtgt 82
>RF01062;MIR812;AACV01000077.1/974-1136 39947:Oryza sativa Japonica
Group
Length = 163
Score = 125 bits (63), Expect = 3e-28
Identities = 88/95 (92%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactattttt-attgttattaca 105
|||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||| |
Sbjct: 148 gtttgaccgttcgtcttatttgaaatttttttatgattaatattttttattgttattata 89
Query: 106 tgataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||||||| |||||||| |||||||||
Sbjct: 88 tgataaaacatgaataatattttatatgtgactaa 54
>RF01062;MIR812;AAAA02011317.1/27519-27679 39946:Oryza sativa Indica
Group
Length = 161
Score = 125 bits (63), Expect = 3e-28
Identities = 81/87 (93%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||| |||||||||| ||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 139 cgttcgttttatttgaaatttttttatgattagtatttttattgctattagatgataaaa 80
Query: 114 catgaatagtattttatgtgtgactaa 140
||||||||||| |||||||||||||||
Sbjct: 79 catgaatagtactttatgtgtgactaa 53
>RF01062;MIR812;AP008207.1/11558080-11557909 39947:Oryza sativa
Japonica Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 81/87 (93%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 150 cgttcgtcttattttaaaatattttatgattagtatttttattgttattagatgataaaa 91
Query: 114 catgaatagtattttatgtgtgactaa 140
||| ||||||||||||||||| |||||
Sbjct: 90 cattaatagtattttatgtgtaactaa 64
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
|||| |||||||||| ||||||||||||||
Sbjct: 132 ttttaaaataagacgaacggttaaacgttg 161
>RF01062;MIR812;AACV01018581.1/23632-23453 39947:Oryza sativa
Japonica Group
Length = 180
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 165 gtttgatcgttcgtcttatttaaaatttttttatgattagtatttttattgctattagat 106
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
| ||||| |||||||||| |||||||||||||||
Sbjct: 105 gctaaaatatgaatagtactttatgtgtgactaa 72
>RF01062;MIR812;AP008213.1/23009525-23009694 39947:Oryza sativa
Japonica Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 137/162 (84%), Gaps = 3/162 (1%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||| |||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 161 tccaatgtttgaccgtttatcttattt--aaattttttatgattagtattttttttgtta 104
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcata 160
||| | ||||||||| ||||||||||||| ||||||||| ||||| |||||
Sbjct: 103 ttagaatataaaacataaatagtattttatatgtgactaattttttaaaaaa-aatcata 45
Query: 161 aatttttcaaataagacggacggttaaacgttggacacggat 202
|| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 44 aaattttcaaataagacggacggtcaaacgttggacacggat 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||| ||| |||||||||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaaaatttt 45
>RF01062;MIR812;AJ307662.1/226897-227069 4530:Oryza sativa (rice)
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||| |||||||||| ||||||| ||||| |||||||| |||||||| ||
Sbjct: 158 gtttgaccgttcgttttatttgaaatttttttacgattaatatttttaatgttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||||||||||||| ||||||||||||||||||
Sbjct: 98 gataaaacatgaataatattttatgtgtgactaa 65
>RF01062;MIR812;AAAA02026920.1/22562-22391 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 133/159 (83%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||||| |||| |||||||||||||| ||||||||| || || |||||
Sbjct: 169 ttcatgtccaacgtttgaccgtttgtcttatttgaaaaatttttatgactaatactttta 110
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
||||||||| |||||||||||||||||||| |||||| |||||| || ||
Sbjct: 109 ttgttattagatgataaaacatgaatagtactttatgcttgactacatttttaaattttt 50
Query: 155 ttcataaatttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||||||| ||||| ||||||||
Sbjct: 49 ttcataaatttttcaaataagacaaacggtcaaacgttg 11
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 160 aaatttttcaaataagacggacggttaaacgttggaca 197
|||||||||||||||||| ||||| ||||||||||||
Sbjct: 128 aaatttttcaaataagacaaacggtcaaacgttggaca 165
>RF01062;MIR812;AAAA02017762.1/94416-94244 39946:Oryza sativa Indica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 158 gtttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||||||||||||| ||||||||||||||||||
Sbjct: 98 gataaaacatgaatactattttatgtgtgactaa 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttg 193
|||||||||||||||| ||||| ||||||||
Sbjct: 132 tttttcaaataagacgaacggtcaaacgttg 162
>RF01062;MIR812;AACV01011622.1/26944-27115 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 83/90 (92%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||||||||||||||||| ||||| ||||||| | ||||||||||||
Sbjct: 163 tccaacgtttgaccgttcgtcttatttgaaattttttcatgattagtgtttttattgtta 104
Query: 101 ttacatgataaaacatgaatagtattttat 130
|||||||||||||||||||||||| |||||
Sbjct: 103 ttacatgataaaacatgaatagtactttat 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggaca 197
|||||||||||||| ||||| ||||||||||||
Sbjct: 133 tttcaaataagacgaacggtcaaacgttggaca 165
>RF01062;MIR812;AP008208.1/8778017-8778189 39947:Oryza sativa
Japonica Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 59 gtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatga 118
||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 146 gtcttatttgaaatttttttatgattagtatttttattgttattagatgataaaacatga 87
Query: 119 atagtattttatgtgtgactaa 140
|||||||||||| | |||||||
Sbjct: 86 atagtattttatatatgactaa 65
>RF01062;MIR812;AC210489.1/99952-99780 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
||||||||| |||||| ||||||||||| | ||||||||||| ||||| ||||||||| |
Sbjct: 149 ttcgtcttaattgaaatttttttatgatcagtatttttattgctattagatgataaaata 90
Query: 116 tgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataag 175
||||||||||||||||||||| ||| || |||||| ||||||||||||||||
Sbjct: 89 tgaatagtattttatgtgtgattaaatattttcaactttttcacaaatttttcaaataag 30
Query: 176 acggacggttaaacgttggacacggat 202
||||| | | ||||||||| |||||||
Sbjct: 29 acggatgatcaaacgttgggcacggat 3
>RF01062;MIR812;AAAA02023748.1/1913-1752 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||| ||
Sbjct: 147 gtttgatcgttcgtcttatttgaaaactttttataattagtatttttattgctattagat 88
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||||| ||||||| |||||||||||||||||
Sbjct: 87 gataaaatatgaataacattttatgtgtgactaa 54
>RF01062;MIR812;AP008207.1/10978256-10978088 39947:Oryza sativa
Japonica Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 89/98 (90%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||| | |||||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 160 tccaacgtttaaccgttcgtcttatttaaaaatttttcatgattagtatttttattgtta 101
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgact 138
||| ||||||||||||||||| |||||||| |||||||
Sbjct: 100 ttagatgataaaacatgaataatattttatatgtgact 63
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttgga 195
|||| |||||||||| ||||||||||||||||
Sbjct: 129 tttttaaataagacgaacggttaaacgttgga 160
>RF01062;MIR812;AP005647.3/68598-68772 39947:Oryza sativa Japonica
Group
Length = 175
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||| ||
Sbjct: 160 gtttgatcgttcgttttatttgaattttttttacgattaatatttttattgttattagat 101
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||||||||| | |||||||||||||
Sbjct: 100 gataaaacatgaatagtactctatgtgtgactaa 67
>RF01062;MIR812;ABRL01000427.1/5583-5412 65489:Oryza barthii
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||||||||||||||| |||| ||||||| || |||||||| ||||| |||
Sbjct: 156 tttgaccgttcgtcttatttgaaaaatttt-atgattaataattttattgctattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||| |||||||||| |||| |||||||||| || |||||||||||||||
Sbjct: 97 ataaaatatgaatagtactttacgtgtgactaaatattttcaattttttcataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggat 202
||||||| ||||||||| |||| ||||| ||||||
Sbjct: 37 caaataaaacggacggtcaaacattggatacggat 3
>RF01062;MIR812;AAAA02000336.1/19048-18877 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 128/150 (85%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||||||||| |||| |||| |||||||| |||||| ||||||| || |||||||||
Sbjct: 149 cgttcgtcttattcgaaatttttctatgattagtatttt-attgttagtagatgataaaa 91
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|||||||| || ||||||||||||| | ||| ||||| ||||||||||||||||
Sbjct: 90 catgaataatactttatgtgtgact-atttttttaaatatttttataaatttttcaaata 32
Query: 174 agacggacggttaaacgttggacacggatt 203
| ||||||||| ||||||| ||||||||||
Sbjct: 31 aaacggacggtcaaacgttagacacggatt 2
>RF01062;MIR812;AAAA02003456.1/35790-35631 39946:Oryza sativa Indica
Group
Length = 160
Score = 121 bits (61), Expect = 5e-27
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| | ||| |||||| |||| ||||||||| ||| ||||||||||||| |||||
Sbjct: 160 ctattcatgttcaacgtttgaccgtttgtcttatttaaaatttttttatgattaatattt 101
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
|||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 100 ttattgctattagatgataaaacatgaatattactttatgtgtgactaa 52
>RF01062;MIR812;AC123527.3/68856-69028 39947:Oryza sativa Japonica
Group
Length = 173
Score = 121 bits (61), Expect = 5e-27
Identities = 118/138 (85%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 158 gtttgaccgttcgtcttatttgaaaa-aaattatgattagtatttttattgttattatat 100
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
| |||||||| ||||||| ||||||||||||||| || ||||||||||||||
Sbjct: 99 ggtaaaacattaatagtactttatgtgtgactaatttttttaacttttttcataaatttt 40
Query: 167 tcaaataagacggacggt 184
||||||||||||||||||
Sbjct: 39 tcaaataagacggacggt 22
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttg 193
|||||||||||||||| ||||| ||||||||
Sbjct: 132 tttttcaaataagacgaacggtcaaacgttg 162
>RF01062;MIR812;AACV01025173.1/5566-5398 39947:Oryza sativa Japonica
Group
Length = 169
Score = 121 bits (61), Expect = 5e-27
Identities = 86/93 (92%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 154 gtttgatcgtttatcttatttgaaa-ttttttatgattagtatttttattgttattaaat 96
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
|||||||||||||||||| ||||||| ||||||
Sbjct: 95 gataaaacatgaatagtactttatgtatgacta 63
>RF01062;MIR812;AC105729.2/60866-60693 39947:Oryza sativa Japonica
Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 85/93 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||
Sbjct: 159 gtttgaccgttcgtcttatttgaattttttttatgattagtatttttattgctattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
||||||||||||||| || ||||||||||||||
Sbjct: 99 gataaaacatgaataatactttatgtgtgacta 67
>RF01062;MIR812;AAAA02003721.1/15438-15265 39946:Oryza sativa Indica
Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 145/174 (83%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagttt-gatcgttcgtcttatttgaaaattttttatgattactatt 90
||||||||| |||| |||| || ||||| |||||||| || ||||||||||||| ||||
Sbjct: 174 ctattcatccccaacgttttgaacgttcatcttatttaaattttttttatgattattatt 115
Query: 91 tttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaa 150
|||||| |||||| |||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 114 tttattattattagatgataaaacataaatagtactttatgtgtgactaattttttaaaa 55
Query: 151 aattttcataaatttttcaaataagacggacggttaaacgttggacacggattt 204
|||||||||||| |||| |||||| | ||| ||| |||| ||| |||| |||||
Sbjct: 54 aattttcataaaatttttaaataaaatggatggtcaaacattgaacacagattt 1
>RF01062;MIR812;AP008207.1/13417947-13417772 39947:Oryza sativa
Japonica Group
Length = 176
Score = 121 bits (61), Expect = 5e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||| ||||||||| ||||||| ||||||| ||||||||| |||||||||||
Sbjct: 152 ttcgtcttattttaaaatttttaatgattagtatttttgttgttattagatgataaaaca 93
Query: 116 tgaatagtattttatgtgtgactaa 140
|||||| ||||||||||||||||||
Sbjct: 92 tgaataatattttatgtgtgactaa 68
>RF01062;MIR812;AC146702.1/14013-13844 39947:Oryza sativa Japonica
Group
Length = 170
Score = 121 bits (61), Expect = 5e-27
Identities = 82/89 (92%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||||||| |||||||| |||| |||||||||||||| || ||
Sbjct: 155 tttgatcgtccgtcttatttgaaatttttttataattagtatttttattgttagtagatt 96
Query: 108 ataaaacatgaatagtattttatgtgtga 136
|||||||||||||||||||||||||||||
Sbjct: 95 ataaaacatgaatagtattttatgtgtga 67
>RF01062;MIR812;AC133008.3/40392-40227 39947:Oryza sativa Japonica
Group
Length = 166
Score = 121 bits (61), Expect = 5e-27
Identities = 111/130 (85%)
Strand = Plus / Minus
Query: 63 tatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaatag 122
||||||||| |||||||||||| |||||||||| |||||| ||||||||| ||||||||
Sbjct: 142 tatttgaaatatttttatgattagtatttttatttttattagatgataaaatatgaatag 83
Query: 123 tattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacg 182
|| ||||||||||||| | ||| |||| |||||||||||||||||||||||||
Sbjct: 82 tactttatgtgtgacttaacttctcaaatttttttataaatttttcaaataagacggacg 23
Query: 183 gttaaacgtt 192
|| |||||||
Sbjct: 22 gtcaaacgtt 13
>RF01062;MIR812;AAAA02027864.1/12883-12726 39946:Oryza sativa Indica
Group
Length = 158
Score = 121 bits (61), Expect = 5e-27
Identities = 86/93 (92%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||| ||
Sbjct: 143 gtttgatcgttcgtcttatttaaaatttttttatgattagt-tttttattgttattagat 85
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
||||||||||||||| || ||||||||||||||
Sbjct: 84 gataaaacatgaataatactttatgtgtgacta 52
>RF01062;MIR812;AAAA02028052.1/7218-7389 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 133/158 (84%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 163 tccaacgtttaaccgtccgtcttatttgaaaaacttttacgattactatttttattgtta 104
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcata 160
||| ||||||||||||||||| || ||||||||||||| | | ||||||||
Sbjct: 103 ttagatgataaaacatgaataatactttatgtgtgact-atttttttttattttttcata 45
Query: 161 aatttttcaaataagacggacggttaaacgttggacac 198
|| || |||||||||||||||||| |||||||||||||
Sbjct: 44 aacttatcaaataagacggacggtcaaacgttggacac 7
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttggaca 197
|||||||||||||||||||||||||||||||||||
Sbjct: 131 tttttcaaataagacggacggttaaacgttggaca 165
>RF01062;MIR812;AP008207.1/24361891-24362053 39947:Oryza sativa
Japonica Group
Length = 163
Score = 121 bits (61), Expect = 5e-27
Identities = 94/105 (89%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||||| |||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 160 ttcatgtccaacgtttgaccgttcgtcttatttgaaattttttaatgattaatattttta 101
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgacta 139
|||||| || ||||||||||||||||| || ||||| ||||||||
Sbjct: 100 ttgttactagatgataaaacatgaataatactttatatgtgacta 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggaca 197
|||||||||||||| ||||| ||||||||||||
Sbjct: 124 tttcaaataagacgaacggtcaaacgttggaca 156
>RF01062;MIR812;AC093088.4/1764-1591 39947:Oryza sativa Japonica
Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||| || ||||| |||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 174 ctatttatgtccaatgtttgaccgttcgtcttatttgaaaaaagattatgattagtattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 114 ttattgttattagatgataaaacataaatagtactttatgtgtgactaa 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttggaca 197
|||||||||||||||| ||||| |||| |||||||
Sbjct: 133 tttttcaaataagacgaacggtcaaacattggaca 167
>RF01062;MIR812;DQ280674.1/7188-7361 4529:Oryza rufipogon
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 114/134 (85%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||| ||
Sbjct: 159 gtttgaccgttcgtcttatttgaaaaaagattatgtttattatttttattgttattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| || ||||||||||||||| || | |||| |||||||||
Sbjct: 99 gataaaacatgaatattactttatgtgtgactaatttttttaatattttttataaatttt 40
Query: 167 tcaaataagacgga 180
||||||||||||||
Sbjct: 39 tcaaataagacgga 26
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttg 193
|||||||||||||||| ||||| ||||||||
Sbjct: 133 tttttcaaataagacgaacggtcaaacgttg 163
>RF01062;MIR812;AAAA02008165.1/41728-41556 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||| |||||||||||| ||||||||||||| |||| ||||| ||||| ||
Sbjct: 158 gtttgaccgttcttcttatttgaaatttttttatgattagcatttctattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||| |||||||||| ||||||||||||||| || |||| ||||| |||
Sbjct: 98 gataaaatatgaatagtactttatgtgtgactaaatatttttaatttttttataaaattt 39
Query: 167 tcaaataagacggacggttaaacgttgga 195
|||||||||||||||||| |||| |||||
Sbjct: 38 tcaaataagacggacggtcaaacattgga 10
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||| ||| |||||||||||||||||||
Sbjct: 10 tccaatgtttgaccgtccgtcttatttgaaaatttt 45
>RF01062;MIR812;AACV01007749.1/2820-2990 39947:Oryza sativa Japonica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 120/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 62 ttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaata 121
||||||||||| |||||||| | ||||||||||||||||| |||||||||||| ||||
Sbjct: 142 ttatttgaaaaaagtttatgatcaatatttttattgttattagatgataaaacataaata 83
Query: 122 gtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacggac 181
||| ||||||||||||| | ||||| |||||||||||||||||||||||| ||
Sbjct: 82 gtactttatgtgtgact-attttttaaaaaaaattcataaatttttcaaataagacgaac 24
Query: 182 ggttaaacgttggacacggat 202
||| ||| |||||||||||||
Sbjct: 23 ggtcaaatgttggacacggat 3
>RF01062;MIR812;AP005709.3/86155-85985 39947:Oryza sativa Japonica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 119/140 (85%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 59 gtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatga 118
||||||||||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||
Sbjct: 144 gtcttatttgaaaatgttttatgattagtattgttattattattagatgataaaacatga 85
Query: 119 atagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacg 178
||| || |||||| |||||| || | ||||||||||||||||||||||||||
Sbjct: 84 atattactttatgcgtgact--cttttttaatatttttcataaatttttcaaataagacg 27
Query: 179 gacggttaaacgttggacac 198
|||||| |||||||| ||||
Sbjct: 26 gacggtcaaacgttgaacac 7
>RF01062;MIR812;AACV01016325.1/15627-15796 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||| |
Sbjct: 155 tttgatcgtccgtcttatttgaaatttttttatgattagtatttttattgatattagaat 96
Query: 108 ataaaacatgaatagtattttatgtgtgacta 139
|||||||||||||||||||||||| |||||||
Sbjct: 95 ataaaacatgaatagtattttatgcgtgacta 64
>RF01062;MIR812;AAAA02000154.1/12707-12879 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||
Sbjct: 151 cgttcgtcttatttgaaatttttttatgattattatttgtattactattagatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
||||||||||| ||||||||||||||| ||| |||||| || ||||| ||||
Sbjct: 91 catgaatagtactttatgtgtgactaaatatttttaaatttttcacaatttttttgaata 32
Query: 174 agacggacggttaaacgttggacacggat 202
||||| ||| | ||| |||||||||||||
Sbjct: 31 agacgaacgatcaaatgttggacacggat 3
>RF01062;MIR812;AACV01012113.1/19788-19615 39947:Oryza sativa
Japonica Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 119/141 (84%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||
Sbjct: 158 tttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatg 99
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||| ||||||||| || | ||| ||||||||||
Sbjct: 98 ataaaacatgaatagtactttatatgtgactaatttgtttaatattttctataaattttt 39
Query: 168 caaataagacggacggttaaa 188
||||||||||| | |||||||
Sbjct: 38 caaataagacgaatggttaaa 18
>RF01062;MIR812;AL662987.3/136857-136685 39947:Oryza sativa Japonica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 119/141 (84%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||| |||
Sbjct: 157 tttgatcgtccgtcttatttaaaatatttttatgattagtatttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||| |||||||||| |||||| |||| | | ||| |||||||||||||||
Sbjct: 97 ataaaatatgaatagtactttatgcgtgatttaacttttaaaattttttcataaattttt 38
Query: 168 caaataagacggacggttaaa 188
|||||||||| |||| |||||
Sbjct: 37 caaataagacagacgattaaa 17
>RF01062;MIR812;AP002094.1/81339-81168 39947:Oryza sativa Japonica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 147/174 (84%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||||||||| |||||| ||||||||||||| |||| || ||||||| |||||
Sbjct: 172 ctattcatctccaacgtttgactgttcgtcttatttaaaaaaaatt-atgattattattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|||||||||||| ||||||||||||||||| || ||||||||||||||| |||
Sbjct: 113 ttattgttattagatgataaaacatgaataatactttatgtgtgactaa-ttttttaaat 55
Query: 152 attttcataaatt-tttcaaataagacggacggttaaacgttggacacggattt 204
|||| ||||||| ||| |||||| ||||||||| ||||||||||||| |||||
Sbjct: 54 ttttttataaattattttaaataaaacggacggtcaaacgttggacacagattt 1
>RF01062;MIR812;ABRL01002334.1/1767-1595 65489:Oryza barthii
Length = 173
Score = 117 bits (59), Expect = 7e-26
Identities = 114/133 (85%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||||||| || |||| |||||||||||||| |||||||||||||| |||
Sbjct: 157 tttgaccgttcgtcttaattaaaaaaattttatgattactacttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||| |||||||||| ||||||||||||||| || | |||||||||||||||
Sbjct: 97 ataaaatatgaatagtactttatgtgtgactaa-ttttttaatatttttcataaattttt 39
Query: 168 caaataagacgga 180
||||||||||||
Sbjct: 38 taaataagacgga 26
>RF01062;MIR812;AAAA02049793.1/470-298 39946:Oryza sativa Indica
Group
Length = 173
Score = 117 bits (59), Expect = 7e-26
Identities = 139/168 (82%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||| | |||||||||||||| ||| |||| |||||||| ||||||||
Sbjct: 170 ttcatgtccaacgtttaaccgttcgtcttatttaaaacttttctatgattagtattttta 111
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
|| |||||| |||||||||||| ||||||| ||||| |||||||| || ||
Sbjct: 110 ttattattagatgataaaacataaatagtagtttatatgtgactattttttaaaattttt 51
Query: 155 ttcataaatttttcaaataagacggacggttaaacgttggacacggat 202
|| |||||||| | ||||||||||||||||||||||||| | ||||||
Sbjct: 50 tttataaatttattaaataagacggacggttaaacgttgaatacggat 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 aaataagacggacggttaaacgttggaca 197
|||||||||| ||||||||||||||||||
Sbjct: 138 aaataagacgaacggttaaacgttggaca 166
>RF01062;MIR812;AAAA02022668.1/6110-6282 39946:Oryza sativa Indica
Group
Length = 173
Score = 117 bits (59), Expect = 7e-26
Identities = 124/148 (83%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||| |||||||||| ||||||||||||| |||||||||| | ||| ||
Sbjct: 158 gtttgaccgttcgttttatttgaaatttttttatgattagtatttttattactcttagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| ||||||| ||||||| ||| |||||||||| |||
Sbjct: 98 gataaaacatgaatagtactttatgtatgactaaatatttttaaatttttcataaaattt 39
Query: 167 tcaaataagacggacggttaaacgttgg 194
|||||||| || ||| || |||||||||
Sbjct: 38 tcaaataaaacagacagtcaaacgttgg 11
>RF01062;MIR812;AP004087.3/81846-82020 39947:Oryza sativa Japonica
Group
Length = 175
Score = 117 bits (59), Expect = 7e-26
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||| ||| ||||||||||| | ||| |||||||||| |||||| |||||||||||
Sbjct: 151 ttcgtcttgtttaaaaattttttacggttaatatttttattattattagatgataaaaca 92
Query: 116 tgaatagtattttatgtgtgactaannnnnnnaaaaattt--tcataaatttttcaaata 173
||||||||| |||||||| |||||| ||||| |||||||||||| |||||
Sbjct: 91 tgaatagtactttatgtgcgactaactttttttttaattttctcataaattttttaaata 32
Query: 174 agacggacggttaaacgttggacacggattt 204
| ||||||||| |||||||||||||||||||
Sbjct: 31 aaacggacggtcaaacgttggacacggattt 1
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 117 bits (59), Expect = 7e-26
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 154 tttgatcgtccgtcttatttgaaatgtttttatgattagtatttttattgttattagata 95
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
|||||||||||||| || |||||||||||||
Sbjct: 94 ataaaacatgaataatactttatgtgtgact 64
>RF01062;MIR812;AP008218.1/27388940-27388769 39947:Oryza sativa
Japonica Group
Length = 172
Score = 117 bits (59), Expect = 7e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||| ||| |||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 150 cgttcgtcttatttaaaatttttttataattagtatttttattgttattagatgataaaa 91
Query: 114 catgaatagtattttatgtgtgactaa 140
||||||| ||||||||||||||||||
Sbjct: 90 tatgaatattattttatgtgtgactaa 64
>RF01062;MIR812;AACV01023089.1/10808-10640 39947:Oryza sativa
Japonica Group
Length = 169
Score = 117 bits (59), Expect = 7e-26
Identities = 84/91 (92%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 154 tttgatcgttcgtcttatttgaaa-ttttttatgattagtatttttattgttattagatt 96
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
||||| || |||||||||||||||||||||
Sbjct: 95 ataaagtataaatagtattttatgtgtgact 65
>RF01062;MIR812;AACV01005368.1/14114-13953 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 7e-26
Identities = 86/95 (90%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||
Sbjct: 153 tccaacgtttgaccgttcgtctaatttaaaaattttttatgattaatatttttattgtta 94
Query: 101 ttacatgataaaacatgaatagtattttatgtgtg 135
||| |||||||||||| |||| || ||||||||||
Sbjct: 93 ttagatgataaaacattaataatactttatgtgtg 59
>RF01062;MIR812;AACV01014101.1/103137-103308 39947:Oryza sativa
Japonica Group
Length = 172
Score = 117 bits (59), Expect = 7e-26
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 156 tttgaccgttcgtattatttgaaa-ttttttatgattagtatttttattgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
| ||| ||||||||||| ||||| |||||||| | |||| ||||||||||
Sbjct: 97 acaaagcatgaatagtactttatatgtgactatttttttaatttctttttataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggatt 203
||||||||||||| ||| ||| ||||||||||||||
Sbjct: 37 caaataagacggatggtcaaatgttggacacggatt 2
>RF01062;MIR812;AP008215.1/816400-816229 39947:Oryza sativa Japonica
Group
Length = 172
Score = 117 bits (59), Expect = 7e-26
Identities = 122/144 (84%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||||||| || ||||||| ||||||||||||||||| |||||||||| ||
Sbjct: 146 cgtcttatttgaaaataatt-atgattagtatttttattgttattaaatgataaaacgtg 88
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
||||||||||||||||| ||||| || |||| |||||||||||||||||||
Sbjct: 87 aatagtattttatgtgtaactaattttttaaagtttttttataaatttttcaaataagaa 28
Query: 178 ggacggttaaacgttggacacgga 201
| | ||||||| ||||||||||||
Sbjct: 27 gaatggttaaatgttggacacgga 4
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
|||||||||||||||||| || ||||||| ||||
Sbjct: 132 ttttcaaataagacggactgtcaaacgttcgaca 165
>RF01062;MIR812;AACV01025378.1/16020-15857 39947:Oryza sativa
Japonica Group
Length = 164
Score = 117 bits (59), Expect = 7e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||| ||||||||||| ||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 142 cgttcggcttatttgaaatttttttatgattaatatttttgttgttattggatgataaaa 83
Query: 114 catgaatagtattttatgtgtgactaa 140
||||||||||| |||||||||||||||
Sbjct: 82 catgaatagtaatttatgtgtgactaa 56
>RF01062;MIR812;AP008208.1/1936493-1936324 39947:Oryza sativa
Japonica Group
Length = 170
Score = 117 bits (59), Expect = 7e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||| | ||| |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 161 tccaacgtttaaccgtccgtcttatttgaaaatttttaatgattagtatttttattgtta 102
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgacta 139
||| ||||||||||||||||| || |||||| |||||||
Sbjct: 101 ttagatgataaaacatgaatattactttatgcgtgacta 63
Score = 71.9 bits (36), Expect = 4e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggacacg 199
||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttttcaaataagacggacggttaaacgttggacacg 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaatttt 76
|||||| |||||||||||||||||||||||
Sbjct: 15 gtttgaccgttcgtcttatttgaaaatttt 44
>RF01062;MIR812;AAAA02007431.1/59086-58914 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||| ||| |||||||||||| |||| ||||| ||||| |||
Sbjct: 157 tttgaccgttcgtcttatttaaaatctttttatgattataatttctattgctattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||| |||||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 97 ataaaatatgaatagtattttatgtgtgactaaatattttcaaattttttataaattttt 38
Query: 168 caaataagacggacggttaaacgttggacacggat 202
|||||||||| | ||||||| ||| |||| ||||
Sbjct: 37 caaataagacatatggttaaatgttagacatggat 3
>RF01062;MIR812;AAAA02025863.1/386-211 39946:Oryza sativa Indica
Group
Length = 176
Score = 115 bits (58), Expect = 3e-25
Identities = 127/151 (84%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa- 113
|||| |||||||| ||| |||||||| |||| |||||||||| |||||| |||||||||
Sbjct: 151 gttcctcttatttaaaatttttttataattattatttttattattattagatgataaaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|||||||| || ||||||| |||||| |||| |||||||||||||||||||||
Sbjct: 91 catgaataatactttatgtaggactaatttttttaaaatttttcataaatttttcaaata 32
Query: 174 agacggacggttaaacgttggacacggattt 204
| ||| ||||||||| ||||||||||||||
Sbjct: 31 aaacgaacggttaaatattggacacggattt 1
>RF01062;MIR812;CR855167.1/50222-50392 4530:Oryza sativa (rice)
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 120/142 (84%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||| || | |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 145 cgtcttatttgataaatatttatgattagtatttttattgttattatatgataaaacatg 86
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
|||||| ||| ||||||||||| || |||| ||||||||||||||||||||
Sbjct: 85 aatagtgttt--tgtgtgactaattttttttaatttttttataaatttttcaaataagac 28
Query: 178 ggacggttaaacgttggacacg 199
|||| || | ||||||||||||
Sbjct: 27 ggacagtcatacgttggacacg 6
>RF01062;MIR812;AACV01013879.1/16944-17114 39947:Oryza sativa
Japonica Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 121/143 (84%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
||||||||||||| ||||||| |||| ||||||||||||||||| ||| ||||| |||||
Sbjct: 144 tcttatttgaaaactttttattattaatatttttattgttattaaatg-taaaagatgaa 86
Query: 120 tagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacgg 179
|||| |||||||||||||| | |||| ||||||||||||||||||||||
Sbjct: 85 tagtgctttatgtgtgactatttttttaatttttttttataaatttttcaaataagacgg 26
Query: 180 acggttaaacgttggacacggat 202
||||| |||||||||||||||||
Sbjct: 25 acggtcaaacgttggacacggat 3
>RF01062;MIR812;AJ307662.1/64503-64674 4530:Oryza sativa (rice)
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 121/143 (84%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||| ||| ||||||| ||||| ||||||||||| ||||| ||||||||||
Sbjct: 148 ttcgtcttatttaaaattttttta-gattaatatttttattgctattagatgataaaact 90
Query: 116 tgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataag 175
||||||||| ||||||||||||||| ||| |||||| |||||||| |||||||
Sbjct: 89 tgaatagtactttatgtgtgactaaatatttttaaacttttcacaaattttttaaataag 30
Query: 176 acggacggttaaacgttggacac 198
|||||||| ||| |||||||||
Sbjct: 29 tcggacggtcaaatgttggacac 7
>RF01062;MIR812;AC137071.3/81351-81514 39947:Oryza sativa Japonica
Group
Length = 164
Score = 115 bits (58), Expect = 3e-25
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||| ||| ||||||||| ||||||||||| ||||| ||
Sbjct: 149 gtttgaccgttcgtcttatttgaaattttgttatgattagtatttttattgctattagat 90
Query: 107 gataaaacatgaatagtattttatgtgtga 136
||||||||||||||| || |||||||||||
Sbjct: 89 gataaaacatgaataatactttatgtgtga 60
>RF01062;MIR812;AACV01019971.1/2544-2716 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
||||||||||| | ||| ||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 150 gttcgtcttatataaaatttttttatgattagtatttttattgttgttagatgataaaac 91
Query: 115 atgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataa 174
|||| || || ||||||||||| | | ||| ||||||||| ||||| ||||||
Sbjct: 90 atgattaatactttatgtgtgaattatacttttaaattttttcataatttttttaaataa 31
Query: 175 gacggacggttaaacgttggacacgga 201
||||||| || ||||||||||||||||
Sbjct: 30 gacggacagtcaaacgttggacacgga 4
>RF01062;MIR812;AAAA02015261.1/2654-2481 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| ||| |||||||||||| ||||||||||| ||||| ||
Sbjct: 159 gtttgaccgttcgtcttatttaaaacatttttatgattagtatttttattgctattaaat 100
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||| ||||||| |||||||||||||||
Sbjct: 99 gataaaacattaatagtaatttatgtgtgactaa 66
>RF01062;MIR812;AC107085.2/163720-163883 39947:Oryza sativa Japonica
Group
Length = 164
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||||||| |||||||||| ||| ||||||||||||| |||||||||| |||||| ||
Sbjct: 153 gtttgatcgtccgtcttatttaaaatttttttatgattagtatttttattattattagat 94
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||| ||||||| |||||| ||||||||
Sbjct: 93 gataaaacataaatagtaatttatgcgtgactaa 60
>RF01062;MIR812;AP008208.1/34763401-34763228 39947:Oryza sativa
Japonica Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 124/147 (84%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 158 tttgaccgttcgtcttatttgaaaattttttatgattagtatttttattactattagatg 99
Query: 108 ataaaacatgaatagtattttatgtgtgacta-annnnnnnaaaaattttcataaatttt 166
||||||||| |||| | ||||||||||| || | || ||||||||||||||
Sbjct: 98 ataaaacataaataatgctttatgtgtgattatatatttttaatttttttcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttg 193
|||||||||||| ||||| ||||||||
Sbjct: 38 tcaaataagacgaacggtcaaacgttg 12
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaa 72
|||||| |||||||||||||||||||
Sbjct: 16 gtttgaccgttcgtcttatttgaaaa 41
>RF01062;MIR812;AACV01002976.1/6404-6578 39947:Oryza sativa Japonica
Group
Length = 175
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| |||| | ||||||||| ||||||||||||||||| ||
Sbjct: 160 gtttgaccgttcgtcttatttaaaaaaatattatgattaatatttttattgttattagat 101
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||||| |||||||||| |||||||||||||||
Sbjct: 100 gataaaatatgaatagtactttatgtgtgactaa 67
>RF01062;MIR812;AP006849.2/59867-60039 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| |||||||||||||| ||| ||||||||||||| ||||||| ||||||||| |||
Sbjct: 157 tttgaccgttcgtcttatttaaaatttttttatgattagtatttttgttgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||| ||||| |||| ||||||||| ||||| ||| |||||||||||||||
Sbjct: 97 ataaaatatgaacagtactttatgtgtcactaatttttttcaaatttttcataaattttt 38
Query: 168 caaataagacg 178
||||||||||
Sbjct: 37 taaataagacg 27
>RF01062;MIR812;AP008217.1/4338916-4338753 39947:Oryza sativa
Japonica Group
Length = 164
Score = 115 bits (58), Expect = 3e-25
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaatt-ttttatgattactatttttattgttattaca 105
|||||| ||| |||||||||| |||| | ||||||||||| ||||||||||||||||| |
Sbjct: 149 gtttgaccgtccgtcttatttaaaaaatcttttatgattagtatttttattgttattaga 90
Query: 106 tgataaaacatgaatagtattttatgtgtgacta 139
|||||||| |||||||||||||||||||||||||
Sbjct: 89 tgataaaatatgaatagtattttatgtgtgacta 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 162 atttttcaaataagacggacggttaaacgtt 192
|||||| |||||||||||||||| |||||||
Sbjct: 122 attttttaaataagacggacggtcaaacgtt 152
>RF01062;MIR812;AC133337.5/20583-20411 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||| ||| ||
Sbjct: 158 gtttgaccgtccgttttatttgaaaaatttttatgattagtatttttattgttgttagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||||| || |||||||||||||||||||||||
Sbjct: 98 gataaaatataaatagtattttatgtgtgactaa 65
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 160 aaatttttcaaataagacggacggttaaacgttg 193
||||||||||||||| ||||||||| ||||||||
Sbjct: 129 aaatttttcaaataaaacggacggtcaaacgttg 162
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaatttt 76
||||| |||||||||| ||||||||||||||||||
Sbjct: 10 tccaatgtttgatcgtctgtcttatttgaaaatttt 45
>RF01062;MIR812;AAAA02035656.1/8606-8433 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
|||||||| ||||| ||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 174 ctattcatgtccaacgtttgatcgttcgtcttatttgattttcttttatgattagaattt 115
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtg 133
|||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 114 ttattgttattagataataaaacatgaatagtactttatgtg 73
>RF01062;MIR812;AC096856.7/14838-15012 39947:Oryza sativa Japonica
Group
Length = 175
Score = 115 bits (58), Expect = 3e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 160 gtttaatcgttcgtcttatttgaaaaacaattatgattagtatttttattgttattagat 101
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
||||| |||||||||||| |||||||||||||||
Sbjct: 100 gataatacatgaatagtactttatgtgtgactaa 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttg 193
|||||||||||||||| ||| ||||||||||
Sbjct: 134 tttttcaaataagacgaacgattaaacgttg 164
>RF01062;MIR812;AL713908.3/153567-153397 4530:Oryza sativa (rice)
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 94/106 (88%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||| | ||| |||||||||||||| ||| ||||||||| |||||||
Sbjct: 168 ttcatatccaacgtttaaccgtccgtcttatttgaaattttcttatgattagtatttttg 109
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 108 ttgttattaaatgataaaatattaatagtattttatgtgtgactaa 63
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttgga 195
|||||||||||||||||||||||||||||||
Sbjct: 132 tttcaaataagacggacggttaaacgttgga 162
>RF01062;MIR812;ABRL01001295.1/1685-1858 65489:Oryza barthii
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 111/130 (85%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 150 ttcgtcttatttaaaaaaattttatgattaatatttttattgttattagatgataaaaca 91
Query: 116 tgaatagtattttatgtgtgacta-annnnnnnaaaaattttcataaatttttcaaataa 174
||||||||| ||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 90 tgaatagtactttgtgtgtgactattttttttccaaatttttcataaatttttcaaataa 31
Query: 175 gacggacggt 184
|||| |||||
Sbjct: 30 gacgaacggt 21
>RF01062;MIR812;AAAA02008884.1/2980-3152 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| || || |||||||| ||||||||| || ||||||||||| ||||| ||
Sbjct: 158 gtttgaccgtttgttttttttgaaaaatttttatgagtagtatttttattgctattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| |||||| | ||||||||| ||| ||||| ||||||||
Sbjct: 98 gataaaacatgaataatattttttatgtgactaaatattttcaaatttttcgtaaatttt 39
Query: 167 tcaaataagacggacggttaaacgtt 192
|||||||||| ||||||| |||||||
Sbjct: 38 tcaaataagatggacggtcaaacgtt 13
>RF01062;MIR812;BX842608.1/118530-118360 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 87/96 (90%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttat--gattactatttttattgttattac 104
|||| |||||||||||||||| |||||||||||| ||||| |||||||||||||| ||
Sbjct: 156 gtttcatcgttcgtcttattttaaaattttttatatgattaatatttttattgttactag 97
Query: 105 atgataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||||||||||| ||||| |||||||||
Sbjct: 96 atgataaaacatgaatagtactttatctgtgactaa 61
>RF01062;MIR812;AAAA02016548.1/13971-13808 39946:Oryza sativa Indica
Group
Length = 164
Score = 113 bits (57), Expect = 1e-24
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||| |
Sbjct: 140 ttcgtcttatttaaaaattttctatgattagtatttttattgttattagataataaaata 81
Query: 116 tgaatagtattttatgtgtgactaa 140
||||||||||||||||||| |||||
Sbjct: 80 tgaatagtattttatgtgttactaa 56
>RF01062;MIR812;AACV01003978.1/33136-32964 39947:Oryza sativa
Japonica Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| ||||||||||| ||||| |||||||||| |||| | ||
Sbjct: 158 gtttgaccgttcgtcttatttaaaaattttttacgattaatatttttattattatcagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||| || ||||||| ||||| ||||||||| || || | |||||||||
Sbjct: 98 gataaaatataaatagtactttatttgtgactaacttattttaattttcttataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggattt 204
| ||||||||| ||||||||||| ||||||||| ||||
Sbjct: 38 ttaaataagacagacggttaaacattggacacgaattt 1
>RF01062;MIR812;AP003838.3/75445-75617 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||| |||||||||| | ||||||||||| ||||||| ||||||||| |||
Sbjct: 157 tttgaccgttcgttttatttgaaattattttatgattagtatttttgttgttattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaa 140
||||||||||||||||| |||| ||||||||||
Sbjct: 97 ataaaacatgaatagtactttacgtgtgactaa 65
>RF01062;MIR812;AAAA02017655.1/22485-22657 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 81/89 (91%)
Strand = Plus / Minus
Query: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
||||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||
Sbjct: 153 atcgttcgtcttatttgaaaaaaaattatgattagtatttttattgctattagatgataa 94
Query: 112 aacatgaatagtattttatgtgtgactaa 140
||||||||||||| |||||||||||||||
Sbjct: 93 aacatgaatagtactttatgtgtgactaa 65
>RF01062;MIR812;AP008207.1/9692047-9691888 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 1e-24
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||||||| |||||||| |||| ||||||| ||||||| | |||
Sbjct: 145 tttgatcgtccgtcttatttgaaatttttttataattaatatttttgttgttatgagatg 86
Query: 108 ataaaacatgaatagtattttatgt 132
|||||||||||||||||||||||||
Sbjct: 85 ataaaacatgaatagtattttatgt 61
>RF01062;MIR812;AP008217.1/23083736-23083904 39947:Oryza sativa
Japonica Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| ||| ||||||| ||||| ||||||||||||||||| ||
Sbjct: 156 gtttgaccgttcgtcttatttaaaatttttttacgattaatatttttattgttattatat 97
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||| |||||| |||| || ||||| || || |||||||||||
Sbjct: 96 gataaaacatatatagtacttta--tgcaactaagtttttttaattttctcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
||||||||||| |||||| ||||||||||||||||||
Sbjct: 38 tcaaataagacagacggtcaaacgttggacacggatt 2
>RF01062;MIR812;AAAA02007137.1/6291-6459 39946:Oryza sativa Indica
Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 73 ttttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgt 132
||||||||||||| ||||||||||| ||||| ||||||||| |||||||||| |||||||
Sbjct: 132 ttttttatgattagtatttttattgctattagatgataaaatatgaatagtactttatgt 73
Query: 133 gtgactaannnnnnnaaaaattttcataaatttttcaaataagacggacggttaaacgtt 192
||||||| ||| ||||||||| ||||| |||||||||||||||| ||| |||
Sbjct: 72 ctgactaaatatttttaaatttttcataatttttttaaataagacggacggtcaaatgtt 13
Query: 193 ggacacggat 202
|| |||||||
Sbjct: 12 gggcacggat 3
>RF01062;MIR812;AP004702.3/6516-6676 39947:Oryza sativa Japonica
Group
Length = 161
Score = 113 bits (57), Expect = 1e-24
Identities = 131/157 (83%), Gaps = 12/157 (7%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||| |||||||| ||| |||||||||||| || |||||||||||||| ||
Sbjct: 146 gtttgaccgttcatcttatttaaaatgtttttatgattagtacttttattgttattagat 87
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 86 gataaaacatgaatagtactt--tgtgtgactaatt----------ttttcataaatttt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
|||||||| ||||||||| |||||||||| |||||||
Sbjct: 38 tcaaataaaacggacggtcaaacgttggatacggatt 2
>RF01062;MIR812;AP008210.1/20084948-20084774 39947:Oryza sativa
Japonica Group
Length = 175
Score = 113 bits (57), Expect = 1e-24
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||| |||||||| |||||||||||||||||||||||||||||| || ||| ||
Sbjct: 160 gtttgaccgtccgtcttatatgaaaattttttatgattactatttttattattgttagat 101
Query: 107 gataaaacatgaatagtattttatg 131
|||||||||||||||||| ||||||
Sbjct: 100 gataaaacatgaatagtactttatg 76
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 gtttgatcgttcgtcttatttgaaaa 72
|||||| |||||||||||||||||||
Sbjct: 16 gtttgaccgttcgtcttatttgaaaa 41
>RF01062;MIR812;AP008210.1/20754189-20754014 39947:Oryza sativa
Japonica Group
Length = 176
Score = 113 bits (57), Expect = 1e-24
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||||||||||||||||||| |||| || ||||||| || |||||| |||
Sbjct: 160 tttgaccgttcgtcttatttgaaaattttaaatgagtattattttttttattattagatg 101
Query: 108 ataaaacatgaatagtattttatgtgtgactaa 140
||||||||||||||||| |||||||||||||||
Sbjct: 100 ataaaacatgaatagtactttatgtgtgactaa 68
>RF01062;MIR812;AP008210.1/16686273-16686102 39947:Oryza sativa
Japonica Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 124/147 (84%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| || ||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 157 gtttgaccgtttgttttatttgaaaattttgtatgattagtatttttattgttattagat 98
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
|||||||| |||||| || |||| |||||||||| |||||||||||| ||||||
Sbjct: 97 gataaaacgtgaatattactttacgtgtgactaa-ttttttaaaaattttcatcaatttt 39
Query: 167 tcaaataagacggacggttaaacgttg 193
| |||||||| ||||| ||||||||
Sbjct: 38 ctagataagacgaacggtcaaacgttg 12
>RF01062;MIR812;AP005871.3/44209-44382 39947:Oryza sativa Japonica
Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 126/150 (84%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||||||||||||||| |||||||||||| || ||| |||| ||||| |||||||||
Sbjct: 152 cgttcgtcttatttgaaaaatttttatgattagtagtttcattgctattagatgataaaa 93
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcat-aaatttttcaaat 172
||| ||||||| ||||||||||||||| || |||| || |||||||| ||||
Sbjct: 92 cattaatagtactttatgtgtgactaaatatttttaatttttttataaaattttttaaat 33
Query: 173 aagacggacggttaaacgttggacacggat 202
|||||||||||| |||||||| |||||||
Sbjct: 32 aagacggacggtcaaacgttgtgcacggat 3
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 160 aaatttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||| ||||| ||||||||
Sbjct: 130 aaatttttcaaataagacgaacggtgaaacgttg 163
>RF01062;MIR812;AP004687.2/30998-30841 39947:Oryza sativa Japonica
Group
Length = 158
Score = 113 bits (57), Expect = 1e-24
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||| ||| ||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 137 ttcgtcttatttaaaatttttttatgattagtatttttattgctattagatgataaaaca 78
Query: 116 tgaatagtattttatgtgtgactaa 140
||||||||| ||| |||||||||||
Sbjct: 77 tgaatagtactttgtgtgtgactaa 53
>RF01062;MIR812;AP003883.3/69275-69435 39947:Oryza sativa Japonica
Group
Length = 161
Score = 113 bits (57), Expect = 1e-24
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||||||||||||||| ||||| |||||| ||| || || ||
Sbjct: 146 gtttgaccgttcgtcttatttgaaaattttttaagattagtattttatttgctagtagat 87
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
|||||||||||||||||||||| ||||||||||
Sbjct: 86 gataaaacatgaatagtattttgtgtgtgacta 54
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
||||||||||||||| ||||| ||||||| ||||
Sbjct: 121 ttttcaaataagacgaacggtcaaacgttagaca 154
>RF01062;MIR812;AAAA02030424.1/11892-11719 39946:Oryza sativa Indica
Group
Length = 174
Score = 111 bits (56), Expect = 4e-24
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||||||||||||| ||| | |||||| |||| |||||||||| |||
Sbjct: 165 tccaacgtttgaccgttcgtcttatttaaaattcttttataattagtatttttattatta 106
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaa 140
||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 105 ttagatgataaaacatgaatagtactttatgtgcgactaa 66
>RF01062;MIR812;AP008210.1/24762244-24762412 39947:Oryza sativa
Japonica Group
Length = 169
Score = 111 bits (56), Expect = 4e-24
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||||||||||||| ||||||||||||| |||||| |||| ||||| |||||||||
Sbjct: 149 cgttcgtcttatttgaat-ttttttatgattagtatttt-attgctattagatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|||||||| |||||||||||||| ||| ||| ||||||||| ||||| |||||
Sbjct: 91 catgaataatattttatgtgtgaataaatatttttaaatttttcataattttttaaaata 32
Query: 174 agacggacggttaaacgttggacacggat 202
||||| ||||| |||| |||| |||||||
Sbjct: 31 agacgaacggtcaaacattgggcacggat 3
>RF01062;MIR812;AAAA02012733.1/7259-7090 39946:Oryza sativa Indica
Group
Length = 170
Score = 111 bits (56), Expect = 4e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||||||||||||||||||||||| |||||| |||| ||||||||||||||| | |||
Sbjct: 155 tttgatcgttcgtcttatttgaaaatattttataattagtatttttattgttataaaatg 96
Query: 108 ataaaacatgaatagtattttatg 131
||| ||||||||||||| ||||||
Sbjct: 95 atagaacatgaatagtagtttatg 72
>RF01062;MIR812;AACV01009504.1/253-81 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||| ||||||||| ||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 151 cgttcgttttatttgaattttttttatgattagtatttttattgctattagatgataaaa 92
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
|||||||| || ||||||||||||||| || |||| | ||| |||||||||
Sbjct: 91 catgaataatactttatgtgtgactaaatattttcaagttttttaaaaaaatttcaaata 32
Query: 174 agacggacggttaaacgttggacacggat 202
||||||||||| |||||||| |||||||
Sbjct: 31 agacggacggtcaaacgttgagcacggat 3
>RF01062;MIR812;AP008217.1/18991518-18991346 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattt 91
||||||| ||||| |||||| || ||||||||||||||| |||| |||||||| ||||
Sbjct: 173 ctattcacgtccaacgtttgaccgctcgtcttatttgaaatttttctatgattaacattt 114
Query: 92 ttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaa 151
|| |||||| || |||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 113 ttgttgttagtagatgataaaacataaatagtactttatgtgtgactaactttttttaat 54
Query: 152 attttcataaatttttcaaataaga 176
||||| |||||||||||||||||||
Sbjct: 53 atttttataaatttttcaaataaga 29
>RF01062;MIR812;AC107314.1/58368-58197 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 4e-24
Identities = 113/133 (84%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||| || |||||||||| | | ||||||||||||| ||||||||||||||||| |||
Sbjct: 157 tttgattgtccgtcttattt-atagttttttatgattaatatttttattgttattagatg 99
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||||||||||||| ||||||||||||| | ||| |||||| ||| ||||
Sbjct: 98 ataaaacatgaatagtactttatgtgtgacttatgtttttaaattttttcaaaaaatttt 39
Query: 168 caaataagacgga 180
|||||||||||||
Sbjct: 38 caaataagacgga 26
>RF01062;MIR812;AAAA02023086.1/15842-15670 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||||| |||||||||||||| |||| ||| |||| ||||||| |||||| || ||
Sbjct: 158 gtttgatcgctcgtcttatttgaattttttctataattagtatttttgttgttagtagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||| || |||||||||| |||||||||||| ||| ||||||||||| |||
Sbjct: 98 gataaaatataaatagtatttcatgtgtgactaacttttttaaatattttcataaaattt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
| ||||||| |||| ||| |||| || ||||||||||
Sbjct: 38 ttaaataagtcggatggtcaaaccttcgacacggatt 2
>RF01062;MIR812;AACV01008001.1/8436-8599 39947:Oryza sativa Japonica
Group
Length = 164
Score = 111 bits (56), Expect = 4e-24
Identities = 123/147 (83%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||||||| |||||||| || |||||||||| ||||| |||||||||
Sbjct: 144 cgttcgtcttatttgaaatttttttat---tagtatttttattactattagatgataaaa 88
Query: 114 catgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaata 173
||| ||||||| ||||||||||||||| ||| |||||| ||| ||||||||||
Sbjct: 87 cataaatagtactttatgtgtgactaaatatttttaaatttttcacaaaattttcaaata 28
Query: 174 agacggacggttaaacgttggacacgg 200
||||| ||||| ||||||||| |||||
Sbjct: 27 agacgaacggtcaaacgttgggcacgg 1
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 42 ccaaagtttgatcgttcgtcttatttgaaaatttt 76
|||| |||||| |||||||||||||||||||||||
Sbjct: 7 ccaacgtttgaccgttcgtcttatttgaaaatttt 41
>RF01062;MIR812;AP008211.1/27196732-27196904 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| | ||||| |||||||||| |||| || ||||| ||||||||||||||||| ||
Sbjct: 158 gtttgaccattcgttttatttgaaatttttctacgattaatatttttattgttattagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||| ||||| || ||||||||||||||| || || ||||||| |||
Sbjct: 98 gataaaacacgaatattactttatgtgtgactaacttattttaattttctcataaaattt 39
Query: 167 tcaaataagacggacggttaaacgttggacacggatt 203
| ||||||||| |||||| |||||||| |||||||||
Sbjct: 38 ttaaataagacagacggtcaaacgttgaacacggatt 2
>RF01062;MIR812;AP004572.5/118194-118022 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 57 tcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacat 116
||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 148 tcgtcttatttgaaatttttttatgattagtatttttattgttattagatgataaaatat 89
Query: 117 gaatagtattttatgtgtgactaa 140
|||||||| |||| |||| |||||
Sbjct: 88 gaatagtactttacgtgtaactaa 65
>RF01062;MIR812;AP008213.1/6128822-6128650 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 133/161 (82%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| | | ||| |||||||||| |||||||| |||| ||||||| ||||||
Sbjct: 164 tccaacgtttgaccctccgttttatttgaaatttttttattattagtatttttcttgtta 105
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcata 160
||| |||||||||||| ||||||| ||||| || |||||| ||| | || |||
Sbjct: 104 ttagatgataaaacataaatagtactttatatgcgactaacttttaaaaatttgtttata 45
Query: 161 aatttttcaaataagacggacggttaaacgttggacacgga 201
|||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 44 aatttttcaaataaaacggacggtcaaacgttggacgcgga 4
>RF01062;MIR812;AC145127.1/834223-834050 39947:Oryza sativa Japonica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
||||||||||||||||||| | ||||||||| || |||||||||||||| ||||||| |
Sbjct: 152 cgttcgtcttatttgaaaaataattatgattagtaattttattgttattagatgataata 93
Query: 114 catgaatagtattttatgtgtgactaa 140
||||||||||||||||||||||||||
Sbjct: 92 gatgaatagtattttatgtgtgactaa 66
>RF01062;MIR812;AAAA02018371.1/438-593 39946:Oryza sativa Indica
Group
Length = 156
Score = 109 bits (55), Expect = 2e-23
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||
Sbjct: 136 cgtcttatttgaaatttttttataattagtatttttattgttattagatgataaaatata 77
Query: 118 aatagtattttatgtgtgactaa 140
||||||| |||||||||||||||
Sbjct: 76 aatagtactttatgtgtgactaa 54
>RF01062;MIR812;AAAA02013743.1/10121-9949 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 143/172 (83%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattacta-tt 90
|||||||| | ||| |||||| ||||||||||||||||||| ||| |||||||| || ||
Sbjct: 173 ctattcatgttcaacgtttgaccgttcgtcttatttgaaaaatttgtatgattagtattt 114
Query: 91 tttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaa 150
||||||| ||||| | |||||||| ||||||||| ||||||||||||||| ||
Sbjct: 113 tttattgctattagaagataaaacgtgaatagtactttatgtgtgactaaatatttttaa 54
Query: 151 aattttcataaatttttcaaataagacggacggttaaacgttggacacggat 202
| ||||||||||||||| |||||||| | || || |||| || |||||||||
Sbjct: 53 atttttcataaattttt-aaataagatgaactgtcaaacattagacacggat 3
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 160 aaatttttcaaataagacggacggttaaacgttg 193
||||||||||||||||||| ||||| ||||||||
Sbjct: 129 aaatttttcaaataagacgaacggtcaaacgttg 162
>RF01062;MIR812;AAAA02020749.1/22281-22455 39946:Oryza sativa Indica
Group
Length = 175
Score = 109 bits (55), Expect = 2e-23
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
|||||||||||| ||| |||||||||| |||| || |||||||||||||||| ||||||
Sbjct: 166 tccaaagtttgaccgtccgtcttattttaaaagattgtatgattactatttttgttgtta 107
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgacta 139
||| ||||||||| |||||||||| |||||| |||||||
Sbjct: 106 ttagatgataaaatatgaatagtactttatgagtgacta 68
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
|||| |||||||||||||||| |||| |||||||
Sbjct: 135 ttttaaaataagacggacggtcaaactttggaca 168
>RF01062;MIR812;AP008207.1/7412250-7412091 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 2e-23
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||| | |||
Sbjct: 145 tttgatcgtccgtcttatttgaaaactttttataattagtatttttattgttatgagatg 86
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
||||||| | ||||||| |||||||||||||
Sbjct: 85 ataaaacgtaaatagtactttatgtgtgact 55
>RF01062;MIR812;AP008218.1/22147224-22147394 39947:Oryza sativa
Japonica Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| | || ||||||||||||||||| || |||||| ||||||||||||||
Sbjct: 162 tccaacgtttgaccatttgtcttatttgaaaatttcttgtgattagtatttttattgtta 103
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgacta 139
||| |||||||||||| | ||||| ||||||||||||||
Sbjct: 102 ttagatgataaaacataattagtactttatgtgtgacta 64
>RF01062;MIR812;AAAA02025509.1/34942-34776 39946:Oryza sativa Indica
Group
Length = 167
Score = 109 bits (55), Expect = 2e-23
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||| | |||||||||| ||||||||||||| ||||||| ||||||||| | |
Sbjct: 151 tttgaccgttcattttatttgaaatttttttatgattagtatttttgttgttattagacg 92
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
||||||||||||||||| |||||||||||||
Sbjct: 91 ataaaacatgaatagtactttatgtgtgact 61
>RF01062;MIR812;AP008208.1/34975479-34975627 39947:Oryza sativa
Japonica Group
Length = 149
Score = 109 bits (55), Expect = 2e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 33 tattcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttt 92
||||||||| ||| ||||| ||||||||| | |||||| |||||| |||||||||||
Sbjct: 148 tattcatcttcaacatttgactgttcgtcttttgtgaaaaaattttataattactatttt 89
Query: 93 tattgttattacatgataaaacatgaatagtattttatgtgtgacta 139
||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 88 tattgttattagatgataaaatatgaatagtactttatgtgtgacta 42
>RF01062;MIR812;AP008207.1/22937798-22937636 39947:Oryza sativa
Japonica Group
Length = 163
Score = 109 bits (55), Expect = 2e-23
Identities = 138/166 (83%), Gaps = 14/166 (8%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaatttttt--atgattactatttt 92
||||| ||||| |||||| ||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 160 ttcatgtccaatgtttgaccgtccgtcttatttgaaaattttttttatgattagtatttt 101
Query: 93 tattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaa 152
| || |||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 100 tgttattattagatgataaaacatgaatagtattt--tgtgtgactaatt---------- 53
Query: 153 ttttcataaatttttcaaataagacggacggttaaacgttggacac 198
||||| |||| |||||||||||||| |||||| |||||||||||||
Sbjct: 52 ttttcttaaacttttcaaataagacagacggtcaaacgttggacac 7
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggaca 197
||||||||||||||||||||| |||| |||||||
Sbjct: 123 ttttcaaataagacggacggtcaaacattggaca 156
>RF01062;MIR812;AAAA02022591.1/24204-24034 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 121/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
||||||||| ||| ||| ||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 148 gttcgtcttgtttaaaatttttttatgattaatatttttattgtgattagatgataaaac 89
Query: 115 atgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataa 174
|||||||| | |||||||||||||| ||| ||||| |||| |||| ||||||
Sbjct: 88 atgaatagaactttatgtgtgacta--ttttttaaatatttttataatttttctaaataa 31
Query: 175 gacggacggttaaacgttggacac 198
||||||||| |||||||||||||
Sbjct: 30 aacggacggtcaaacgttggacac 7
>RF01062;MIR812;AP004364.4/71884-71717 39947:Oryza sativa Japonica
Group
Length = 168
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 56 ttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaaca 115
|||||||||||||||||||||||||||||| | ||||||||| ||||| ||||||||| |
Sbjct: 144 ttcgtcttatttgaaaattttttatgattaatgtttttattgctattagatgataaaata 85
Query: 116 tgaatagtattttatgtgt 134
||||||||| |||||||||
Sbjct: 84 tgaatagtactttatgtgt 66
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttg 193
||||||||||||||| | ||||||||||||
Sbjct: 128 ttttcaaataagacgaatggttaaacgttg 157
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
||||| |||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 152 atcgtccgtcttatttaaaatttttttatgattagtatttttattgttattagatgataa 93
Query: 112 aacatgaatagtattttatgtgtgact 138
|| |||||||||| |||||| ||||||
Sbjct: 92 aatatgaatagtactttatgcgtgact 66
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 83/91 (91%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| |||||||||||||| |||||||| |||| ||||||| ||||||| | |||
Sbjct: 157 tttgatcgtccgtcttatttgaaa-ttttttataattagtatttttgttgttatgagatg 99
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
|||||||||||||||||||||||| ||||||
Sbjct: 98 ataaaacatgaatagtattttatgcgtgact 68
>RF01062;MIR812;AACV01022718.1/12342-12516 39947:Oryza sativa
Japonica Group
Length = 175
Score = 109 bits (55), Expect = 2e-23
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| ||| |||||||||||||| ||||| ||||||| ||||| ||||||||
Sbjct: 166 tccaacgtttgaccgtccgtcttatttgaaattttttaatgattagtatttatattgtta 107
Query: 101 ttacatgataaaacatgaatagtattttatg 131
||| |||||||||||||||||||| ||||||
Sbjct: 106 ttagatgataaaacatgaatagtactttatg 76
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 165 tttcaaataagacggacggttaaacgttggacac 198
|||||||||||||||||||| |||||||||||||
Sbjct: 136 tttcaaataagacggacggtcaaacgttggacac 169
>RF01062;MIR812;AP004786.3/24323-24154 39947:Oryza sativa Japonica
Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 112/133 (84%), Gaps = 4/133 (3%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 153 tttgaccgttcgtcttatttgaaaattttgtatgattagtatttttattgctattagatg 94
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
||||||| |||||| ||||||||||||||| ||| ||||| ||||||||
Sbjct: 93 ataaaac----atagtactttatgtgtgactaaatatttttaaatttttcgcaaattttt 38
Query: 168 caaataagacgga 180
|||||||||||||
Sbjct: 37 caaataagacgga 25
>RF01062;MIR812;AACV01021456.1/16145-15983 39947:Oryza sativa
Japonica Group
Length = 163
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 60 tcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatgaa 119
|||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 142 tcttatttgaaaattttttacgattagtatttttatcgttattagatgataaaacatgaa 83
Query: 120 tagtattttatgtgtgact 138
||||| |||||| ||||||
Sbjct: 82 tagtactttatgcgtgact 64
>RF01062;MIR812;AC118134.3/11105-10932 39947:Oryza sativa Japonica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||||||| ||||||||||||||||| ||||||||| ||||||||
Sbjct: 171 ttcatgtccaacgtttgatcattcgtcttatttgaaaaaggattatgattagtattttta 112
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaatt 154
|||||| || ||||||||| ||||||||||||||| ||| |||||| || | ||
Sbjct: 111 ttgttactagatgataaaatatgaatagtattttacgtgagactaatttttttaatattt 52
Query: 155 ttcataaatttttcaaataa 174
||||||||||||| ||||||
Sbjct: 51 ttcataaattttttaaataa 32
>RF01058;MIR806;CR855021.1/38470-38230 4530:Oryza sativa (rice)
Length = 241
Score = 109 bits (55), Expect = 2e-23
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
|||||||| ||||| |||||||| |||| |||||| |||||| ||| |||||||||||||
Sbjct: 61 cgtcttatatgaaatttttttataattaatattttcattgttgttagatgataaaacatg 120
Query: 118 aatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagac 177
| || || |||||| |||| | | || ||||||||| |||||||||||||||
Sbjct: 121 attaatactttatgcgtgatttatatttttaatttttttcataattttttcaaataagac 180
Query: 178 ggacggttaaacgttggacacgga 201
||||||||||||||||||||||||
Sbjct: 181 ggacggttaaacgttggacacgga 204
>RF01062;MIR812;AAAA02034929.1/6482-6321 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 7e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 54 cgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaa 113
|||||||||||||||||| |||||||| |||| ||||||||||||||||| | |||||||
Sbjct: 141 cgttcgtcttatttgaaatttttttattattagtatttttattgttattagacgataaaa 82
Query: 114 catgaatagtattttatgtgtgacta 139
||||||||| | |||||||| |||||
Sbjct: 81 catgaataggactttatgtgcgacta 56
>RF01062;MIR812;AAAA02031000.1/27408-27247 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 7e-23
Identities = 81/90 (90%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| ||||| ||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 153 tccaatgtttgaccgttcatcttatttgaattttttttatgattagtatatttattgtta 94
Query: 101 ttacatgataaaacatgaatagtattttat 130
||| ||||||||| ||||||||||||||||
Sbjct: 93 ttagatgataaaatatgaatagtattttat 64
>RF01062;MIR812;AP008218.1/8955365-8955194 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 84/93 (90%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 157 gtttgaccgtttatcttatttgaaa--tttttatgattaatatttttattgttattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
|||||||||||||||||| |||| |||||||||
Sbjct: 99 gataaaacatgaatagtactttacgtgtgacta 67
>RF01062;MIR812;AACV01007931.1/1172-1345 39947:Oryza sativa Japonica
Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 32 ctattcatctccaaagtttgatcgttcgtcttatttgaaaatttt-ttatgattactatt 90
|||||||| | ||| |||| | |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 174 ctattcatgttcaacgtttcaccgttcgtcttatttaaaaattttgttatgattagtatt 115
Query: 91 tttattgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
|| |||| ||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 114 ttcattgctattagatgataaaacatgaatagtattttatgcatgactaa 65
>RF01062;MIR812;AACV01021457.1/3714-3885 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 81/90 (90%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| ||||| ||| ||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 163 tccaacgtttgtccgtccgttttatttgaaaattttttatgattattgtttttattgtta 104
Query: 101 ttacatgataaaacatgaatagtattttat 130
||| ||||||||||||||||| ||||||||
Sbjct: 103 ttagatgataaaacatgaatattattttat 74
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 164 ttttcaaataagacggacggttaaacgttggacacgga 201
||||||||||| |||||||| |||||||||| |||||
Sbjct: 132 ttttcaaataaaacggacggacaaacgttggatacgga 169
>RF01062;MIR812;AL732646.5/54257-54086 4530:Oryza sativa (rice)
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 123/147 (83%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| ||||||||| || ||||||| ||||| |||||||||||||| || ||
Sbjct: 157 gtttgaccgtttgtcttatttaaatttttttta-gattaatatttttattgttactagat 99
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| || ||||||||||||||| || ||||||||||| ||
Sbjct: 98 gataaaacatgaataatactttatgtgtgactaacttttaaaatttttttcataaatgtt 39
Query: 167 tcaaataagacggacggttaaacgttg 193
| |||||||||||||||| ||||||||
Sbjct: 38 ttaaataagacggacggtcaaacgttg 12
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||||||||||||||||||||| |||||||| |||| |||||||||||||| | |||
Sbjct: 159 tttgatcgttcgtcttatttgaaatttttttataattagcatttttattgttatgagatg 100
Query: 108 ataaaacatgaatagtatttta 129
||||||||||||||||| ||||
Sbjct: 99 ataaaacatgaatagtacttta 78
>RF01062;MIR812;AP003286.3/51081-50906 39947:Oryza sativa Japonica
Group
Length = 176
Score = 107 bits (54), Expect = 7e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| ||||| |||||| ||||||||||||||||||| |||||||||| ||||||||
Sbjct: 173 ttcatatccaatgtttgaccgttcgtcttatttgaaaaaaatttatgattaatattttta 114
Query: 95 ttgttattacatgataaaacatgaatagtattttatgt 132
||||||||| ||||||||| || ||||||| |||||||
Sbjct: 113 ttgttattagatgataaaatataaatagtactttatgt 76
>RF01062;MIR812;AAAA02016433.1/5618-5782 39946:Oryza sativa Indica
Group
Length = 165
Score = 107 bits (54), Expect = 7e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
|||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 142 gttcatcttatttgaaaattttttatgattagtatttttattgttattagataataaaat 83
Query: 115 atgaatagtattttatgtgtga 136
|| |||| ||||||||||||||
Sbjct: 82 ataaatattattttatgtgtga 61
>RF01062;MIR812;AP004670.4/125854-125681 39947:Oryza sativa Japonica
Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 94/106 (88%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 35 ttcatctccaaagtttgatcgttcgtcttatttgaaaattttttatgattactattttta 94
||||| |||||||||||| |||||||||||||| |||| || ||||||| ||||||||
Sbjct: 171 ttcatgtccaaagtttgaccgttcgtcttatttaaaaaaaatt-atgattagtattttta 113
Query: 95 ttgttattacatgataaaacatgaatagtattttatgtgtgactaa 140
||||||||| ||||||||| |||||||||| ||||||| |||||||
Sbjct: 112 ttgttattatatgataaaatatgaatagtactttatgtatgactaa 67
>RF01062;MIR812;AP004079.2/68011-68172 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 7e-23
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||| ||
Sbjct: 147 gtttgaccgttcgtcttatttaaaaaaaatttatgattaatatttttgttgttattagat 88
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||||||||| |||||||| ||||||
Sbjct: 87 gataaaacatgaatagtactttatgtgcgactaa 54
>RF01062;MIR812;AACV01006839.1/7979-8153 39947:Oryza sativa Japonica
Group
Length = 175
Score = 107 bits (54), Expect = 7e-23
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||| |||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 160 gtttgaccgtttgtcttatttgaaaaaagattatgattagtatttttattgttattagat 101
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||||||||||| || ||||||||||||
Sbjct: 100 gataaaacatgaatagtaattcatgtgtgactaa 67
>RF01062;MIR812;AACV01007841.1/2621-2455 39947:Oryza sativa Japonica
Group
Length = 167
Score = 107 bits (54), Expect = 7e-23
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 74 tttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgtg 133
|||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct: 129 tttttatgattaatatttttattgttattaaatgataaaacataaatagtactttatgtg 70
Query: 134 tgactaannnnnnnaaaaattttcataaatttttcaaataagacggacggttaaacgtt 192
||||||| || |||| |||||||||| |||||| ||||||||| |||||||
Sbjct: 69 tgactaattttttaaatctttttaataaattttttaaataaaacggacggtcaaacgtt 11
>RF01062;MIR812;AAAA02003990.1/25355-25184 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 157 gtttgaccgttcgtcttatttgaaaaaaaat-atgattagtatttttattgttattacat 99
Query: 107 gataaaacatgaatagtattttatgtgtga 136
|||||||||||||||||| |||||||||||
Sbjct: 98 gataaaacatgaatagtactttatgtgtga 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 163 tttttcaaataagacggacggttaaacgttggaca 197
|||||||||||||||| ||||| ||||||| ||||
Sbjct: 131 tttttcaaataagacgaacggtcaaacgttagaca 165
>RF01062;MIR812;AAAA02005797.1/35871-35709 39946:Oryza sativa Indica
Group
Length = 163
Score = 107 bits (54), Expect = 7e-23
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||
Sbjct: 140 gttcgtcttatttgaaatttttttatgattattatttttattattattagatgataaaac 81
Query: 115 atgaatagtattttatgtgtgactaa 140
||||||| || |||||||| ||||||
Sbjct: 80 atgaata-tactttatgtgcgactaa 56
>RF01062;MIR812;AP005545.3/134472-134636 39947:Oryza sativa Japonica
Group
Length = 165
Score = 107 bits (54), Expect = 7e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 41 tccaaagtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgtta 100
||||| |||||| |||| ||||||||||||| | |||||| |||| ||||||||||||||
Sbjct: 156 tccaatgtttgaccgtttgtcttatttgaaattcttttataattagtatttttattgtta 97
Query: 101 ttacatgataaaacatgaatagtattttatgtgtgact 138
|| |||||||||||| ||||||||||||||| |||||
Sbjct: 96 gtagatgataaaacataaatagtattttatgtatgact 59
>RF01062;MIR812;AACV01008141.1/24734-24562 39947:Oryza sativa
Japonica Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 85/94 (90%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||| ||||||||||||| ||||||||| ||||||| ||||||||||| ||||| ||
Sbjct: 158 gtttgattgttcgtcttatttaaaaattttt-atgattagtatttttattgctattagat 100
Query: 107 gataaaacatgaatagtattttatgtgtgactaa 140
|||||||||| ||||| | |||||||||||||||
Sbjct: 99 gataaaacataaatagcactttatgtgtgactaa 66
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 107 bits (54), Expect = 7e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
||||||||| ||||||||||||||| ||||||| |||| ||||||| ||||||| | |||
Sbjct: 51 tttgatcgtccgtcttatttgaaaactttttataattagtatttttgttgttatgagatg 110
Query: 108 ataaaacatgaatagtatttta 129
||||||||||||||||||||||
Sbjct: 111 ataaaacatgaatagtatttta 132
>RF01062;MIR812;AAAA02032399.1/2847-2676 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 119/141 (84%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 63 tatttgaaaattttttatgattactatttttattgttat--tacatgataaaacatgaat 120
||||||||| |||||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 141 tatttgaaatatttttatgattagtatttttattgttattatatatgataaaacatgaat 82
Query: 121 agtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataagacgga 180
|||| ||||||||||| || || |||||||||||||||| |||||||| ||
Sbjct: 81 agtactttatgtgtgatta---ttttttaattttttcataaatttttcgaataagaccga 25
Query: 181 cggttaaacgttggacacgga 201
|||| ||||||||||||||||
Sbjct: 24 cggtcaaacgttggacacgga 4
>RF01062;MIR812;AAAA02030399.1/18454-18623 39946:Oryza sativa Indica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 122/146 (83%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
|||||| |||||||||||||| ||| ||||||||||||| ||||| ||||| ||||| ||
Sbjct: 155 gtttgaccgttcgtcttattt-aaatttttttatgattagtatttctattgctattagat 97
Query: 107 gataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttt 166
||||||||||||||| || ||||| ||| | ||| || ||||||||||||||
Sbjct: 96 gataaaacatgaataatactttatatgttattaaatatttttaattttttcataaatttt 37
Query: 167 tcaaataagacggacggttaaacgtt 192
|||||||| ||||||||| |||||||
Sbjct: 36 tcaaataaaacggacggtcaaacgtt 11
>RF01062;MIR812;AACV01008181.1/26937-27107 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 58 cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 146 cgtcttatttgaattttttttatgattaatatttttatttttattacatgataaaacatg 87
Query: 118 aatagtattttatgtgtgact 138
|||| || ||||||| |||||
Sbjct: 86 aataatactttatgtatgact 66
>RF01062;MIR812;AACV01015495.1/1482-1650 39947:Oryza sativa Japonica
Group
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 71 aattttttatgattactatttttattgttattacatgataaaacatgaatagtattttat 130
||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 132 aattttttatgattagtatttttattgttattggatgataaaacatgaatagtactttat 73
Query: 131 gtgtgacta 139
|||||||||
Sbjct: 72 gtgtgacta 64
>RF01062;MIR812;AACV01005485.1/13897-13720 39947:Oryza sativa
Japonica Group
Length = 178
Score = 105 bits (53), Expect = 3e-22
Identities = 116/138 (84%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 55 gttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaac 114
|||||| |||||||||| |||||||| |||| ||||||||||| ||||| ||||||||||
Sbjct: 149 gttcgttttatttgaaatttttttattattagtatttttattgctattagatgataaaac 90
Query: 115 atgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaatttttcaaataa 174
|| |||| || ||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 89 ataaatactactttatgtgtgactaaatttttttaaatttttcgcaaatttttcaaataa 30
Query: 175 ga-cggacggttaaacgt 191
|| |||||||| ||||||
Sbjct: 29 gatcggacggtcaaacgt 12
>RF01062;MIR812;AAAA02033483.1/10241-10071 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 122/146 (83%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
|||||||||||||||||||| || |||||||| |||| ||||||||||| ||||| |||
Sbjct: 156 tttgatcgttcgtcttattt-aattttttttataattagtatttttattgctattagatg 98
Query: 108 ataaaacatgaatagtattttatgtgtgactaannnnnnnaaaaattttcataaattttt 167
|||||||||||||| || ||||| |||||||| ||| |||||||||||||||
Sbjct: 97 ataaaacatgaataatactttataagtgactaaatatttttaaatttttcataaattttt 38
Query: 168 caaataagacggacggttaaacgttg 193
|||||||||||| || ||||||||
Sbjct: 37 ttaataagacggacagtcaaacgttg 12
>RF01062;MIR812;AP003871.3/21703-21544 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 3e-22
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 47 gtttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacat 106
||||||| || |||||||||| |||| |||||||||||| ||||||| ||||||||| ||
Sbjct: 145 gtttgattgtccgtcttatttaaaaaatttttatgattagtatttttgttgttattagat 86
Query: 107 gataaaacatgaatagtattttatgtgtgacta 139
||||||||||||||| || ||||| ||||||||
Sbjct: 85 gataaaacatgaatattactttatatgtgacta 53
>RF01062;MIR812;DQ280619.1/7388-7543 39946:Oryza sativa Indica Group
Length = 156
Score = 105 bits (53), Expect = 3e-22
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 87 tatttttattgttattacatgataaaacatgaatagtattttatgtgtgactaannnnnn 146
||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 112 tatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttt 53
Query: 147 naaaaattttcataaatttttcaaataagacgga 180
|| | ||||||||||||||| ||||||||||||
Sbjct: 52 taatatttttcataaattttttaaataagacgga 19
