miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AP005520.3/99925-99756 39947:Oryza sativa Japonica
Group
Length = 170
Score = 254 bits (128), Expect = 3e-67
Identities = 156/170 (91%)
Strand = Plus / Minus
Query: 1 gttttagtgcccaactttgaccgtccgtcttatttgaaaannnnnnnattactattttta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 170 gttttagtgcccaactttgaccgtccgtcttatttgaaaatttttttattactattttta 111
Query: 61 ttgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnnnnnnnt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 110 ttgttattagatgataaaatataaatattacttcatgcgtgacttaatttttaaaaaaat 51
Query: 121 ttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 1
>RF01062;MIR812;AC137623.3/95208-95379 39947:Oryza sativa Japonica
Group
Length = 172
Score = 131 bits (66), Expect = 3e-30
Identities = 98/111 (88%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 123 attagtatttttgttgttattaaatgataaaatataaatagtactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 63 tttttaaaattttttcataaactttttaaataagacggacggttaaacgtt 13
>RF01062;MIR812;AACV01016379.1/6378-6208 39947:Oryza sativa Japonica
Group
Length = 171
Score = 121 bits (61), Expect = 3e-27
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnnn 115
||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 115 ttttattgttattggatgataaaatacaaatattactttatgcgtgacttaatattttaa 56
Query: 116 nnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
||| ||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct: 55 ttttttttataaattttttaaataagacggacggtcaaacgttggacatggaaa 2
>RF01062;MIR812;AAAA02002775.1/3101-3273 39946:Oryza sativa Indica
Group
Length = 173
Score = 121 bits (61), Expect = 3e-27
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||||||||||||| ||| |||||||||||| | ||||| ||| |||||||||
Sbjct: 123 attactatttttattgttatttgataataaaatataaagagtactttatgtgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 63 ttttttttaaaatttcataaattttttaaataagacggacggtcaaacgttagacacg 6
>RF01062;MIR812;AP008214.1/27600377-27600200 39947:Oryza sativa
Japonica Group
Length = 178
Score = 117 bits (59), Expect = 5e-26
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || |||| ||||| ||| |||||| |
Sbjct: 123 attactatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 63 tttttttaaaattttcataaatttttcaaataagacggacggtcaaacgttggacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP008210.1/34581048-34581220 39947:Oryza sativa
Japonica Group
Length = 173
Score = 117 bits (59), Expect = 5e-26
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || |||| ||||| ||| |||||| |
Sbjct: 123 attactatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaac 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 63 tttttttaattttttcataaaattttcaaataagacggacggtcaaacgttagacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 2e-25
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct: 123 attagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||||||| |||| |||||||| |||| || ||||||||| ||||||
Sbjct: 63 cttttcaatttttttcataaatttttcaaataagatggacagtcaaacgttgggcacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AP008213.1/13703145-13703316 39947:Oryza sativa
Japonica Group
Length = 172
Score = 115 bits (58), Expect = 2e-25
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 123 attagtatttttattgttattagatgataaaatataaatactactttatacgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| |||| |||||||||||||||| ||||||||| |||||
Sbjct: 63 cttttgaaactttttcataattttttcaaataagacggacggtcaaacgttgggtacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC145388.2/39592-39419 39947:Oryza sativa Japonica
Group
Length = 174
Score = 115 bits (58), Expect = 2e-25
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||
Sbjct: 125 attagtatttttattgttattagatgataaaatatgaatagtactttatgcgtaacttaa 66
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaa 154
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 65 cttttaaaattttttcataaaatttttaaataaaacggacggttaaa 19
>RF01062;MIR812;AP005820.3/50751-50579 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 8e-25
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||||||| |||| ||||| ||||||||||| |
Sbjct: 123 attagtatttttattattattagatgataaaatatgaataatactttatgcgtgacttga 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||||||| |||| |||||||||||||||||||||||||| || |||
Sbjct: 63 cttttcaaattttttcataaatttttcaaataagacggacggttaaacgttgggcatgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 8 tgcccaac-tttgaccgtccgtcttatttgaaaa 40
|||||||| ||| |||||||||||||||||||||
Sbjct: 8 tgcccaacgtttaaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP004235.4/38182-38010 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 5e-23
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 123 attactatttttattgttattagatgataaaatataaatattactttatgtgtggcttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||| |||| |||||||||| | ||| ||| |||| | |||||
Sbjct: 63 tttttaaaatttgttcataaatttttcaaataagacgaatggtcaaatgttgtatacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AACV01006290.1/6868-6709 39947:Oryza sativa Japonica
Group
Length = 160
Score = 107 bits (54), Expect = 5e-23
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaatataaataatactttatgcgtgacttaa 61
Query: 108 -tttttnnnnnnntttcataaaatttttaaataagacgg 145
||||| |||||||||||||| |||||||||||
Sbjct: 60 ctttttaaaaaaatttcataaaattttcaaataagacgg 22
>RF01062;MIR812;AAAA02010426.1/8713-8533 39946:Oryza sativa Indica
Group
Length = 181
Score = 107 bits (54), Expect = 5e-23
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||| ||||| |||||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 123 attattattattattattattagatgataaaatatatatagtactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||||||||| ||||||||||| |||| ||||||||| |||| |
Sbjct: 63 ttttctgaattgtttcataaaattttcaaataagacgggcggtcaaacgttgggcacgaa 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 1 gttttagtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 1 gttttcgtgcccaacgtttgaccgcccgtcttatttgaaaa 41
>RF01062;MIR812;AP008214.1/24853063-24852892 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 5e-23
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 123 attagtatttttattattattagatgataaaatataaataatactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggt 150
|||| ||||||||| ||||||||||||||| |||||
Sbjct: 63 cttttaaaaatttttcataaattttttaaataagacgaacggt 21
>RF01062;MIR812;AP008213.1/29010370-29010198 39947:Oryza sativa
Japonica Group
Length = 173
Score = 107 bits (54), Expect = 5e-23
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||| |||| ||||||||||||| |||| ||||| |||||||||||||
Sbjct: 123 attactatttttattgctattggatgataaaatatgaatagtactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| |||||||||||| || | ||| |||||||||| || ||
Sbjct: 63 tttttaaagttctttcataaactttttaaataaggcgaaaggtcaaacgttggatacaga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AP008216.1/9990692-9990523 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 5e-23
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||| ||||||| ||||||||| |||| ||||| ||||| |||||||
Sbjct: 123 attaatatttttattgtaattagattataaaatatgaataatactttatgcgcgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| |||| |||||||||||| || | |||||||||||||||
Sbjct: 63 tttttaaaattttttcataaatttttcaaataagacggatggctgaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;ABRL01001819.1/15713-15880 65489:Oryza barthii
Length = 168
Score = 105 bits (53), Expect = 2e-22
Identities = 99/115 (86%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaatatgaatattactttatgtgtgacttaa 61
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggac 162
|| | ||||||||| |||| |||||||||||||| |||||||||||||
Sbjct: 60 cttat-aaattttttcataaatttttcaaataagacggacgattaaacgttggac 7
>RF01062;MIR812;AAAA02012868.1/4891-5054 39946:Oryza sativa Indica
Group
Length = 164
Score = 101 bits (51), Expect = 3e-21
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||| |||||||||||| |||| ||||| || |||||| ||
Sbjct: 123 attactatttttattgttattacatgataaaatatgaataatacttaatatgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| |||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 63 tattttcaaatttttcataatttttttaaataagacggatggtcaaacgttggacacgga 4
>RF01062;MIR812;AP004989.3/37084-37251 39947:Oryza sativa Japonica
Group
Length = 168
Score = 101 bits (51), Expect = 3e-21
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| |||||| |
Sbjct: 123 attactaattttattgttattagatgataaagtatgaatagtactttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| || |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 63 ttattaaaaaaaattcataaaatttttaaataagacgaacggtcaaacgttggacacgga 4
>RF01062;MIR812;AAAA02008225.1/3104-3263 39946:Oryza sativa Indica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 84/96 (87%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaatataaataatactttatgcgtgacttaa 61
Query: 108 -tttttnnnnnnntttcataaaatttttaaataaga 142
||||| |||||||||||||| ||||||||
Sbjct: 60 ctttttaaaaaaatttcataaaattttcaaataaga 25
>RF01062;MIR812;AACV01010650.1/29162-28990 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||
Sbjct: 118 tatttttattgttattagatgataaaatataaataatactttatgcatgacttatttttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacac 164
||||||||| || |||||||||||| || |||||| ||||||||
Sbjct: 58 ctaatcttttcataaatttcttaaataagacgaacaattaaacattggacac 7
>RF01062;MIR812;AACV01010047.1/12882-12711 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 3e-21
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||| ||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 123 attagtatttttattgctattacatgataaaacatgaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 63 tatttttaaatttttcataaaatttttaaataagacggacggtcaaacgttgggcacgga 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| |||||||||||||||||||| ||||
Sbjct: 7 gtgcccaacgtttgaccgtccgtcttatttaaaaa 41
>RF01062;MIR812;AACV01016751.1/1577-1419 39947:Oryza sativa Japonica
Group
Length = 159
Score = 101 bits (51), Expect = 3e-21
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||| ||||||||| ||||||| ||||| ||| |||||| |
Sbjct: 123 attaatatttttattgttattatatgataaaacataaatagtactttatgtgtgactaac 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| | ||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 63 tttttttaattttctcataaatttttcaaataagacggacggtcaaacgttggacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02020540.1/18625-18797 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| ||||||| ||||| || |||||| ||
Sbjct: 123 attagtatttttattgttattagatgataaaacataaataatactttatatgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| ||||| ||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 63 tatttttaaatttttcacaaattttttaaataagacgaacggttaaacgttgggcacgga 4
>RF01062;MIR812;AAAA02013962.1/8250-8079 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||||||||||||| |||| ||||| ||| || ||||||
Sbjct: 123 attagtatttttgttgttattagatgataaaatatgaatagtactttatgagtaacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| | ||||||| |||| |||||||||||| |||||||||||||||||| |
Sbjct: 63 ttttcaaaattttctcataaatttttcaaataagacggaaggttaaacgttggacacgaa 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| ||||||||||||||||||| || |||| ||||| ||| |||||||||
Sbjct: 123 attagtatttttgttgttattagatgataaaacatgaatagtactttatgtgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| ||| |||||||||||| ||| |||| |||||||||||
Sbjct: 63 tttttaaaattgtttcataaatctttcaaataagacggatggtcaaacattggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgtt 158
|||||||| |||||||||||||||| |||||||
Sbjct: 130 aaaattttcaaataagacggacggtcaaacgtt 162
>RF01062;MIR812;AAAA02028052.1/7218-7389 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 104/123 (84%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || |||| ||||| ||| ||||| ||
Sbjct: 122 attactatttttattgttattagatgataaaacatgaataatactttatgtgtgac-tat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| || | |||||||||||||||| ||||||||||||| ||
Sbjct: 63 ttttttttattttttcataaacttatcaaataagacggacggtcaaacgttggacacaga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 130 tttttaaataagacggacggttaaacgttggaca 163
|||| |||||||||||||||||||||||||||||
Sbjct: 132 ttttcaaataagacggacggttaaacgttggaca 165
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttga 37
||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttga 38
>RF01062;MIR812;AP008208.1/1936493-1936324 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 1e-20
Identities = 94/110 (85%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||||||||| |||||||||| |
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact--a 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgt 157
||||| |||||||||||||| |||||||||| ||||| ||||||
Sbjct: 62 tttttttaatcttttcataaaattttcaaataagacgaacggtcaaacgt 13
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttggacacg 165
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 126 aaaattttcaaataagacggacggttaaacgttggacacg 165
>RF01062;MIR812;AAAA02023939.1/14060-13889 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 5e-20
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||
Sbjct: 123 attactatttttattgttagtagatgataaaacataaataatactttatgcgtgactttg 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| | ||| |||||||| |||||||||| | ||| ||||||||| ||||||
Sbjct: 63 tttttttaattttctcaaaaaattttcaaataagacgtatggtcaaacgttggtcacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AC116604.1/20583-20755 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 5e-20
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| |||||||||||||||| | || ||||| ||||||||||||
Sbjct: 123 attagtattttcattgttgttagatgataaaatatgattagtactttatgcgtgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct: 63 ctttttaatttttttcataatttttttaaataagacgaacggtcaaacgttggacacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AACV01014691.1/269-98 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/113 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| || |||||||||||||||| | || ||||| |||||||||||||
Sbjct: 123 attagtatttttattattgttagatgataaaatatgattaatactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttgg 160
||||| |||||||| ||||||||||||||||||| | |||||||||
Sbjct: 63 ttttttaatttttttcataatttttttaaataagacggacgatcaaacgttgg 11
>RF01062;MIR812;AAAA02018832.1/20699-20526 39946:Oryza sativa Indica
Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 102/121 (84%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| ||||||| ||||| ||| || ||| |
Sbjct: 124 attactatttttattgttattagatgataaaacataaatagtactttatgtgtcactaac 65
Query: 108 ttttt-nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
||||| || |||||| ||||||||||||||||||||| ||||||| |||||||
Sbjct: 64 tttttaaaaaaaattgcataaattttttaaataagacggacggtcaaacgttagacacgg 5
Query: 167 a 167
|
Sbjct: 4 a 4
>RF01062;MIR812;AP005558.3/35527-35699 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| ||||||||||||| || | || ||||| |||||||||||
Sbjct: 123 attagtattttaattgttgttagatgataaaacatgattaatactttatgcgtgacttgt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 63 tttttcaatttttttcataatttttttaaataagacggacggtcaaacgttggacacgga 4
Query: 168 a 168
|
Sbjct: 3 a 3
>RF01062;MIR812;AAAA02006351.1/7205-7034 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 7e-19
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||
Sbjct: 123 attagtatttttattattattagatgataaagtatgaatagtactttatgcgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||| ||||||||| |||||||||||||| |||||| |||| |||| ||||||
Sbjct: 63 cctttaaaattttttcataaattttttaaataagacagacggtcaaacattgggcacgga 4
>RF01062;MIR812;AACV01005609.1/2115-1946 39947:Oryza sativa Japonica
Group
Length = 170
Score = 93.7 bits (47), Expect = 7e-19
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||| ||||||||||||| || || |||||||||||||
Sbjct: 121 attagtatttttattgttattagatggtaaaatataaatagtattttatgcgtgacttaa 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||| |||||| ||||||||||||||||| ||| || | ||||||
Sbjct: 61 cttttaaatttttttcat--aattttcaaataagacggacggttgaacattaggcacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02004678.1/3358-3529 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 7e-19
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||| ||||||||| || || ||| ||||||||||||||
Sbjct: 118 tatttttattgttattagatgataagatataaatagtaatttatgtgtgacttaattttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggtta 152
||| ||||| ||||||||||||| |||||||||
Sbjct: 58 aaaacttttttataaattttttaaataagatggacggtta 19
>RF01062;MIR812;AAAA02023086.1/15842-15670 39946:Oryza sativa Indica
Group
Length = 173
Score = 93.7 bits (47), Expect = 7e-19
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||| |||||||||||||||||||| || |||||| |||||| |
Sbjct: 123 attagtatttttgttgttagtagatgataaaatataaatagtatttcatgtgtgactaac 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||||||||||||||||| |||| ||| |||| || ||||||||
Sbjct: 63 ttttttaaatattttcataaaatttttaaataagtcggatggtcaaaccttcgacacgga 4
>RF01062;MIR812;AP008211.1/27196732-27196904 39947:Oryza sativa
Japonica Group
Length = 173
Score = 93.7 bits (47), Expect = 7e-19
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| | |||||||||| ||| |||||| |
Sbjct: 123 attaatatttttattgttattagatgataaaacacgaatattactttatgtgtgactaac 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| || | |||||||||||||||||||||| |||||| |||||||| |||||||
Sbjct: 63 ttattttaattttctcataaaatttttaaataagacagacggtcaaacgttgaacacgga 4
>RF01062;MIR812;AY946549.1/36-208 4530:Oryza sativa (rice)
Length = 173
Score = 93.7 bits (47), Expect = 7e-19
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || |||| || || ||| |||||| |
Sbjct: 123 attactatttttattgttattagatgataaaacatgaatagtattttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| ||||||||||||||||| || ||| ||||||||||||
Sbjct: 63 ttttttaaaatttttcataaattttttaaataagacggatagtcaaatgttggacacgga 4
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 93.7 bits (47), Expect = 7e-19
Identities = 100/120 (83%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 87 attagtatttttattactattagatgataaaacatgaataatactttatgtgtgactaaa 146
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| ||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 147 tattttcaaatttttcacaaatttttcaaataagacggacggttaaacgttggacacgga 206
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttg 159
||||||||||||||| ||||| ||||||||
Sbjct: 77 tttttaaataagacgaacggtcaaacgttg 48
>RF01062;MIR812;ABRL01002334.1/1767-1595 65489:Oryza barthii
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||| ||||||||||||||||||||||||||| |||| ||||| ||| ||||| |||
Sbjct: 123 attactacttttattgttattagatgataaaatatgaatagtactttatgtgtgac-taa 65
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacgga 146
||||| ||||||||| |||||||||||||||||
Sbjct: 64 ttttttaatatttttcataaattttttaaataagacgga 26
>RF01062;MIR812;AAAA02004279.1/45936-45765 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
||||||||| |||||||||||||||||| |||| || || ||| |||| |||| | ||
Sbjct: 115 tttttattgctattagatgataaaatattaatagtattttatgtgtga-ttaaatatttt 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 56 cattttttcataaattttttaaataagacggacggttaaacgttggacacg 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||||||| |||||| ||| ||||||||||||||
Sbjct: 128 aaaattttcaaataaaacgaacggttaaacgttg 161
>RF01062;MIR812;AP008213.1/6398072-6397898 39947:Oryza sativa
Japonica Group
Length = 175
Score = 91.7 bits (46), Expect = 3e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 126 attaatatttttattgttattagatgataaaatatgaatagtactttatgcgtgacttat 67
Query: 108 tttttnnnnnnntttcataaaatttttaaataaga 142
|||| ||||||||| |||||||||||||
Sbjct: 66 ttttctaaactttttcataaattttttaaataaga 32
>RF01062;MIR812;AP008214.1/4739414-4739243 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||| ||||||||||||||||||| || | || | ||| |||||||||||
Sbjct: 123 attactattttcattgttattagatgataaatcatgattaatgctttatgcgtgacttgt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 63 ttttttaattttttttataatttttttaaataagacggacggtcaaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AL662987.3/136857-136685 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||
Sbjct: 123 attagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgatttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaa 154
|||| ||||||||| |||| ||||||||| |||| |||||
Sbjct: 63 cttttaaaattttttcataaatttttcaaataagacagacgattaaa 17
>RF01062;MIR812;AY946547.1/46-217 4530:Oryza sativa (rice)
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||
Sbjct: 123 attagtatttttattgttattagatgataaaatataaataggactttatgcatgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacgga 146
|||| |||||||||||| | ||||||||||||
Sbjct: 63 cttttaaatttttttcataaaattatcaaataagacgga 25
>RF01058;MIR806;CR855021.1/38470-38230 4530:Oryza sativa (rice)
Length = 241
Score = 91.7 bits (46), Expect = 3e-18
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| ||||||||||||| || | || ||||| |||||||| |||
Sbjct: 85 attaatattttcattgttgttagatgataaaacatgattaatactttatgcgtgatttat 144
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 145 atttttaatttttttcataattttttcaaataagacggacggttaaacgttggacacgga 204
Query: 168 aac 170
|||
Sbjct: 205 aac 207
>RF01062;MIR812;AAAA02022479.1/15737-15568 39946:Oryza sativa Indica
Group
Length = 170
Score = 89.7 bits (45), Expect = 1e-17
Identities = 103/122 (84%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 121 attagtatttttatcgttattagatgataaaatataaatatttctttatgcgtgacttat 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||| ||| |||| ||||||||| |||| ||||| ||||||||||||
Sbjct: 61 gtttttaaagtttttca-aaagttttcaaataagacagacgattaaa-gttggacacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;ABRL01001134.1/13120-13291 65489:Oryza barthii
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||| |||||||||| |||| ||||| |||||| |||||| ||||
Sbjct: 118 tatttttattgttattagaagataaaatatgaataatactttatgcgtaacttaactttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
||||||||| |||| ||||||||| |||||| |||||||
Sbjct: 58 caaatattttcataaatttttcaaataagacagacggtcaaacgtt 13
>RF01062;MIR812;AAAA02006778.1/7515-7346 39946:Oryza sativa Indica
Group
Length = 170
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/122 (83%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||||||||||||||||||||||||| ||||| |||| | | || |
Sbjct: 122 attagtattttaattgttattagatgataaaatataaatagtactttatgc-tcaattta 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 63 tttttaaatttttttaataaaatttttaaataagacggatggttaaatgttgggtacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AAAA02007268.1/24540-24712 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| ||| |||||||||||||||||| |||| ||||| ||| || ||| ||
Sbjct: 123 attagtatttttgttgctattagatgataaaatatgaatagtactttatgtgtaactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| ||| ||||| ||||||||||||| |||||||||||||||| |||||
Sbjct: 63 ttttttaattttttttataaattttttaaataagatggacggttaaacgttgaacacg 6
>RF01062;MIR812;AP008216.1/1661314-1661486 39947:Oryza sativa
Japonica Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| |||| ||||||||
Sbjct: 123 attagtatttttattgttattagatgataaaatatgaatagtactttatgcatgacttaa 64
Query: 108 ttttt 112
|||||
Sbjct: 63 ttttt 59
>RF01062;MIR812;AP008213.1/24151079-24150909 39947:Oryza sativa
Japonica Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||| ||||||||||||||| | |||| ||||| ||| |||||| ||
Sbjct: 123 attactatttttattgctattagatgataaaacgtgaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
| ||| ||||||||| ||||||||||||||||||| | ||||||||| ||||
Sbjct: 63 tattttcaaaattttcataaattttttaaataagacggacgatcaaacgttgggcacg 6
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/122 (83%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||| ||||||||||| || |||| ||||| | |||||||||
Sbjct: 84 attagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgacttat 143
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 144 atttttaaattttttcaaaaaatttttaaataagacggacggttaaa-gttggacgcgga 202
Query: 168 aa 169
||
Sbjct: 203 aa 204
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccaactttgaccgtccgtcttatttgaaaa 40
|||||||| |||||||||||||||| ||||
Sbjct: 195 ccaactttaaccgtccgtcttatttaaaaa 166
>RF01062;MIR812;AACV01012070.1/2375-2546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||
Sbjct: 123 attactatttttattgttattagatgataaaatatgaatagtactttatgcgtgatttaa 64
>RF01062;MIR812;AACV01001785.1/10936-11105 39947:Oryza sativa
Japonica Group
Length = 170
Score = 87.7 bits (44), Expect = 5e-17
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 121 attaatatttttattgttattagatgataaaatatttatagtactttatgcgtgacttaa 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataa 140
|||| |||||||||||||| ||||||
Sbjct: 61 cttttaaatttttttcataaaattttcaaataa 29
>RF01062;MIR812;AAAA02023967.1/6016-6181 39946:Oryza sativa Indica
Group
Length = 166
Score = 87.7 bits (44), Expect = 5e-17
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||| |||||| || |||| ||||| ||||||||||||
Sbjct: 123 attagtatttttgttgttattagataataaaacatgaatagtactttatgcgtgacttac 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacac 164
||||| ||||||||| ||| ||||||||| | ||||| |||||||||||||
Sbjct: 63 tttttaattttttttcataaattttgtaaataagatgaacggtcaaacgttggacac 7
>RF01062;MIR812;AAAA02022393.1/54049-54221 39946:Oryza sativa Indica
Group
Length = 173
Score = 87.7 bits (44), Expect = 5e-17
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||| |||||||| |||||||||||||| ||| | ||| |||||| ||| |||
Sbjct: 118 tatttttattgctattagataataaaatataaatagtacattatgtgtgactaaatattt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||||||| |||| |||||||| ||||||| ||||||||||||||
Sbjct: 58 ttaaatgtttcataaatttttaaaataagatggacggtcaaacgttggacacg 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||| |||||||||||||| ||||||||| ||||
Sbjct: 129 aaaaattttaaataagacgaacggttaaatgttg 162
>RF01062;MIR812;AACV01005045.1/46361-46532 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 5e-17
Identities = 102/121 (84%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact-ta 106
|||| ||||||||||||| ||||||||||||||||||||| ||||| ||| ||||| |
Sbjct: 123 attagtatttttattgttgttagatgataaaatataaataatactt-atgtatgactatt 65
Query: 107 atttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 64 ttttttttaattttttcataaattttttaaataagacggacggtcaaacattggacacgg 5
Query: 167 a 167
|
Sbjct: 4 a 4
>RF01062;MIR812;AP005741.3/59732-59924 39947:Oryza sativa Japonica
Group
Length = 193
Score = 87.7 bits (44), Expect = 5e-17
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 51 actatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattt 110
|||||||||||||||||||||||||| || ||||||| ||||| |||| ||||||| |||
Sbjct: 118 actatttttattgttattagatgatagaacataaatagtactttatgcatgacttatttt 59
Query: 111 ttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaa 168
|| ||| |||| |||| |||||||||||||| | |||||||||||||||||
Sbjct: 58 tt--taattttttataagtttttcaaataagacggacgatcaaacgttggacacggaa 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaa 79
|||||||||||||||||||||||||| |||||
Sbjct: 150 attactatttttattgttattagatgctaaaa 119
>RF01062;MIR812;AACV01013223.1/16637-16465 39947:Oryza sativa
Japonica Group
Length = 173
Score = 87.7 bits (44), Expect = 5e-17
Identities = 102/122 (83%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 121 attaatatttttattattattagatgataaaatataaatagtactttatgagtgacttat 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||| ||||||||||||||| ||| | |||||||||||| ||
Sbjct: 61 ttttt--tatttttttataaattttttaaataagacgaacgatctaacgttggacacaga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AACV01010642.1/16635-16808 39947:Oryza sativa
Japonica Group
Length = 174
Score = 87.7 bits (44), Expect = 5e-17
Identities = 101/121 (83%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| ||||||| ||||| |||||| ||| ||
Sbjct: 124 attattatttttattgctattagatgataaaacataaatagtactttatgcgtaactaaa 65
Query: 108 t-ttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
| |||| ||||| ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 64 tattttttaaatttttcacaaatattttaaataagacggacagtcaaacgttggacacgg 5
Query: 167 a 167
|
Sbjct: 4 a 4
>RF01062;MIR812;AC225897.2/52668-52836 63629:Oryza minuta
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| |||| ||| || ||| |
Sbjct: 121 attaatatttttattgttattagatgataaaatatgaatagaactttatgtgtaact--a 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||||||||||||||||| ||| ||| |||||||||||| |||
Sbjct: 63 tttttttagtttttttataaaatttttaaataagatggatggtcaaacgttggacatgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AP008212.1/4136542-4136710 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 122 attaatatttttattgttattagatgataaaatatgaatagtactttatgcgtgactta 64
>RF01062;MIR812;AAAA02023282.1/1611-1439 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 93/112 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 122 attagtatttttattgctattagatgataaaacataaatagtactttatgtgtgactaaa 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
| ||| ||||| ||| |||| |||||||||||||||| ||||||||
Sbjct: 62 tgtttttaactttttcacaaatttttcaaataagacggacggtcaaacgttg 11
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||||||| |||||||||||||||||||||||||
Sbjct: 128 aaaattttcaaataagacggacggttaaacgttg 161
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 16 tttgaccgtccgtcttatttgaaaa 40
>RF01062;MIR812;AC135918.3/81258-81422 39947:Oryza sativa Japonica
Group
Length = 165
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 124 ataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 47 ataaaattttcaaataagacggacggttaaacgttggacacggaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 132 tttaaataagacggacggttaaacgtt 158
||||||||||||||||| |||||||||
Sbjct: 127 tttaaataagacggacgattaaacgtt 153
>RF01062;MIR812;AP008210.1/22759381-22759209 39947:Oryza sativa
Japonica Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 103/124 (83%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| |||||||||||||||| | || ||||| |||| |||||||
Sbjct: 124 attagtatttttattgttgttagatgataaaatatgattaatactttatgcatgacttat 65
Query: 108 -tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
||||| |||||||| ||| ||||||||||| | |||||||||||||||||||
Sbjct: 64 ctttttaaatttttttcataatttttctaaataagacgaatggttaaacgttggacacgg 5
Query: 167 aaac 170
||||
Sbjct: 4 aaac 1
>RF01062;MIR812;AP008215.1/15555127-15554959 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgactta 64
>RF01062;MIR812;AAAA02014397.1/14648-14476 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||| |||||||||||| || |||| ||||| | | ||||||
Sbjct: 123 attaatatttttatttttactagatgataaaacatgaatagtactttacgtgtgactatt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 63 tttttttaattttttcataaattttttaaataagacggacggtcaaacgttggacacgga 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttggaca 163
||||||||||||||| ||| ||| ||||||||| ||||
Sbjct: 129 aaaatttttaaataaaacgaacgattaaacgttagaca 166
>RF01062;MIR812;AC118670.2/49825-49999 39947:Oryza sativa Japonica
Group
Length = 175
Score = 85.7 bits (43), Expect = 2e-16
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
|||||||||||||||||||||||||||| || | ||||| ||||||| ||||| ||||
Sbjct: 116 tttttattgttattagatgataaaatatgaacagtactttatgcgtgtcttaacttttaa 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| |||||||||||||||||| ||||| ||||| |||| ||||
Sbjct: 56 aaaaaattcataaactttttaaataagacggacaattaaatgttgggcacgtaaac 1
>RF01062;MIR812;AACV01016325.1/7551-7720 39947:Oryza sativa Japonica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||| |||||||||||||||||| |||| || |||||| |
Sbjct: 123 attaatatttttattgttatttgatgataaaatataaatagcactttatatgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| || | ||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 63 ttattttaattttctcataaaatttttaaataagacggatggtcaaacgttggatacgga 4
>RF01062;MIR812;AAAA02007137.1/6291-6459 39946:Oryza sativa Indica
Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| |||||||||||||||||| |||| ||||| ||| ||||| ||
Sbjct: 123 attagtatttttattgctattagatgataaaatatgaatagtactttatgtctgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| |||||||| ||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 63 tatttttaaatttttcataatttttttaaataagacggacggtcaaatgttgggcacgga 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| |||||||||||||||||||| ||||
Sbjct: 7 gtgcccaacatttgaccgtccgtcttatttaaaaa 41
>RF01062;MIR812;AACV01015064.1/44721-44553 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| |||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 122 attagtatttttattgctattagatgataaac-ataaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| |||| |||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 63 tatttttaaatttttcgtaaattttttaaataagacggacggttaaacattagacacgga 4
>RF01062;MIR812;AP008210.1/31316510-31316672 39947:Oryza sativa
Japonica Group
Length = 163
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| |||||||||||||||||| |||| ||||| ||| ||||| ||
Sbjct: 123 attagtatttttattgctattagatgataaaatatgaatagtacttaatgtttgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| ||| ||||| ||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 63 tatttttaatttttttataaattttttaaataagacggatggtcaaacgttagacacgga 4
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgactta 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 128 aaaaattttaaataagacggacgattaaa-gttggacacggaaac 171
>RF01062;MIR812;AACV01004111.1/19435-19261 39947:Oryza sativa
Japonica Group
Length = 175
Score = 85.7 bits (43), Expect = 2e-16
Identities = 93/112 (83%)
Strand = Plus / Minus
Query: 59 tattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnnnnnn 118
||||||||||||||||||||| || |||| ||||| |||| ||||||| |||||
Sbjct: 112 tattgttattagatgataaaacatgaatagtactttatgcctgacttattttttaaaaaa 53
Query: 119 ntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 52 aattcataattgtttcaaataagacggacggtcaaacgttggacacggaaac 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaa 39
||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaa 40
>RF01062;MIR812;AACV01026889.1/4535-4695 39947:Oryza sativa Japonica
Group
Length = 161
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 113 attaatatttttattgttattagatgataaaacataaatagtactttatgcgtgactta 55
>RF01062;MIR812;AAAA02013629.1/14001-14173 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| ||||| ||| |||||| |
Sbjct: 123 attattatttttattgttattagatgataaaatatgaatagtactttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||| |||| ||||||||| || ||| |||||||||| |||||
Sbjct: 63 ttttttaaaattttttataaatttttcaaataagacagatggtcaaacgttggatacgga 4
>RF01062;MIR812;AAAA02010760.1/63763-63594 39946:Oryza sativa Indica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tttcataatttttttaaataagacggacggttaaacgttggacacggaaac 1
>RF01062;MIR812;AC137070.2/86863-86692 39947:Oryza sativa Japonica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| ||||| ||| |||||| |
Sbjct: 122 attaatatttttattgttattagatgataaaacatgaataatactttatgtgtgact-at 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| || |||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 63 tttttaaaaaaaattgttaaattttttaaataagacggacggtcaaacgttggacacgga 4
>RF01062;MIR812;AACV01016077.1/12148-12316 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| ||||| | ||||| ||| |||||
Sbjct: 123 attactatttttattgttattagatgataaaacataaaaagtactttatgtatgactatt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 63 ttttttaaattttttcataaattttttaaataagacggacagtaaaatattggacacgga 4
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 85.7 bits (43), Expect = 2e-16
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 88 attagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgactaaa 147
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
| ||| ||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 148 tatttttaattttttcataaatttttcaaataagacggacggtcaaacgttg 199
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 194 tttgaccgtccgtcttatttgaaaa 170
>RF01062;MIR812;AP008209.1/19056884-19056712 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 7e-16
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||| |||
Sbjct: 116 tttttattgctattagatgataaaatatgaatagtactttatgtgtgactaaatattttc 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| ||| |||| |||||||||||||||| ||||||||| ||||
Sbjct: 56 aaatttttcacaaatttttcaaataagacggacggtcaaacgttgggcacg 6
Score = 54.0 bits (27), Expect = 6e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| |||||||||||||||||||||||||
Sbjct: 7 gtgcccaacgtttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02037624.1/5275-5103 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 7e-16
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| | ||| |||| ||||| |
Sbjct: 123 attaatatttttattgttattagatgataaaacatgaatagtgctttatgcttgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggac 162
||||| ||| ||||| ||||||||||||| ||||||| |||||||||||
Sbjct: 63 ttttttaattttttttataaattttttaaataagatggacggtcaaacgttggac 9
>RF01062;MIR812;AP008215.1/20364714-20364886 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 7e-16
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||||||||||||| |||| || ||||| |||||||||||
Sbjct: 123 attagtatttttattgttgttagatgataaaacataattaatactttatgcgtgacttgt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| |||||||||||| | ||| ||||||| |||||||| |||
Sbjct: 63 ctttttaatttttttcataatatttttaaataaaatggatggttaaatgttggacatgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AC092388.5/132070-131900 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 7e-16
Identities = 102/123 (82%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||| ||||||||| |||| ||||| | | |||||||||
Sbjct: 122 attagtatttttgttgttattagataataaaatatgaatagtactttacgtgtgacttaa 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||| |||||||||||||||||||||||| |||| || | ||||||
Sbjct: 62 cttttaaaattttttcat-aaatttttaaataagacggacggtcaaacattaggcacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AACV01009184.1/9617-9446 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 7e-16
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
||||||||||||||||||| |||||||| |||| || || ||| | ||||||| ||||
Sbjct: 116 tttttattgttattagatggtaaaatatgaatagtaatttatgtgagacttaacttttac 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
|||||||| |||| |||||||||||||||| ||||||||| ||||||||
Sbjct: 56 aattttttcataattttttcaaataagacggacggtcaaacgttgggcacggaaa 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| |||||||||||||||||||||||||
Sbjct: 7 gtgcccaacgtttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AACV01007749.1/2820-2990 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 7e-16
Identities = 96/115 (83%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||| ||||||| ||||| ||| ||||| || |||||
Sbjct: 117 tatttttattgttattagatgataaaacataaatagtactttatgtgtgac-tatttttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||||||| |||| |||||||||| ||||| ||| ||||||||||||
Sbjct: 58 aaaaaaaattcataaatttttcaaataagacgaacggtcaaatgttggacacgga 4
>RF01062;MIR812;AP005709.3/86155-85985 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 7e-16
Identities = 101/122 (82%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||| ||||| |||||||||||||||| || |||||||||| ||||||||||
Sbjct: 121 attagtattgttattattattagatgataaaacatgaatattactttatgcgtgact--c 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||||| |||| |||||||||||||||| |||||||| |||| ||
Sbjct: 63 ttttttaatatttttcataaatttttcaaataagacggacggtcaaacgttgaacacaga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC079935.3/88083-88241 4530:Oryza sativa (rice)
Length = 159
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||
Sbjct: 107 tttttattgttattagatgataaaatgtgaatagtacttcatgcgtgacttatttttt 50
>RF01062;MIR812;AP008214.1/27534677-27534504 39947:Oryza sativa
Japonica Group
Length = 174
Score = 83.8 bits (42), Expect = 7e-16
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||| |||||||||||||| |||| || || ||| ||||||
Sbjct: 123 attaatatttttattgttatcagatgataaaatatgaataatattttatgtgtgactatt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||| ||||||||||||||||||| | ||| ||||||||||||
Sbjct: 63 ttttttaatttttttcataatatttttaaataagacggacaatcaaatgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AL606622.3/117271-117099 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 7e-16
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||| | ||||||||||||| |||| || || ||| |||||| | |||||
Sbjct: 118 tatttttattgttagtggatgataaaatatgaataatagtttatgtgtgactaatttttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 58 aaaatattttcatattttttttaaataagacggacggtcaaacgttggacacgga 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 124 ataaaatttttaaataagacggacggttaaacgttggaca 163
||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 127 ataaaatttctaaataagacgaacggtcaaacgttggaca 166
>RF01062;MIR812;AP006186.3/94692-94521 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 7e-16
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||| |||||||||||||| |||| ||||| || |||||||||
Sbjct: 123 attagtatttttattgttatgagatgataaaatatgaatagtactttatacgtgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggt 150
|||| ||||| |||||||||||||||| ||||||||
Sbjct: 63 gtttttaaattctttcagaaaatttttaaataagccggacggt 21
>RF01062;MIR812;AACV01018882.1/18464-18633 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 7e-16
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||| || |||| || || ||| |||||| | |||||
Sbjct: 118 tatttttattgttattagatgataaaacatgaataatagtttatgtgtgactaatttttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||||||||||||||||||| ||| ||| |||| ||| |||||||
Sbjct: 58 atatttttttcataaaatttttaaataagatggatggtcaaacattgaacacgga 4
>RF01062;MIR812;AC133008.3/40392-40227 39947:Oryza sativa Japonica
Group
Length = 166
Score = 83.8 bits (42), Expect = 7e-16
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||||||| |||| ||||| ||| |||||||||
Sbjct: 123 attagtatttttatttttattagatgataaaatatgaatagtactttatgtgtgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
|| | ||| ||||| |||| |||||||||||||||| |||||||
Sbjct: 63 cttctcaaatttttttataaatttttcaaataagacggacggtcaaacgtt 13
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AACV01008001.1/8436-8599 39947:Oryza sativa Japonica
Group
Length = 164
Score = 83.8 bits (42), Expect = 7e-16
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 119 attagtatttttattactattagatgataaaacataaatagtactttatgtgtgactaaa 60
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
| ||| ||||| |||||||| |||||||||| ||||| ||||||||| |||||
Sbjct: 59 tatttttaaatttttcacaaaattttcaaataagacgaacggtcaaacgttgggcacgg 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| ||||||||| |||||||||||||||
Sbjct: 3 gtgcccaacgtttgaccgttcgtcttatttgaaaa 37
>RF01062;MIR812;AP008210.1/30487394-30487225 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 7e-16
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 123 attagtatttttattgttattagatgataaaatatgaatattacttattgtgtgactatt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataaga 142
||||| |||||||||||||||||||||||
Sbjct: 63 ttttttcaattttttcataaaatttttaaataaga 29
>RF01062;MIR812;AACV01007841.1/2621-2455 39947:Oryza sativa Japonica
Group
Length = 167
Score = 83.8 bits (42), Expect = 7e-16
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||| ||||||||| ||||||| ||||| ||| |||||| |
Sbjct: 121 attaatatttttattgttattaaatgataaaacataaatagtactttatgtgtgactaat 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
||||| ||| ||||| ||||||||||| ||||||||| |||||||
Sbjct: 61 tttttaaatctttttaataaattttttaaataaaacggacggtcaaacgtt 11
>RF01062;MIR812;AP003292.2/68177-68343 39947:Oryza sativa Japonica
Group
Length = 167
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
|||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 118 attagtatttttattgttattagatgataaaatataaatagtactttatacgtgactt 61
>RF01062;MIR812;AP005828.2/107056-106895 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
|||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 116 attagtatttttattgttattagatgataaaatatgaataatactttatgcgtgactt 59
>RF01062;MIR812;AAAA02005541.1/24465-24293 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 7e-16
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||| |||
Sbjct: 118 tatttttattactattagatgataaaacatgaatagtactttatgtgtgactaaatgttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
||||||||| |||| |||||||||||||||||||||||||
Sbjct: 58 ttaattttttcataaatttttcaaataagacggacggttaaacgttg 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||||||| |||||||||||||||| ||||||||
Sbjct: 129 aaaattttcaaataagacggacggtcaaacgttg 162
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 83.8 bits (42), Expect = 7e-16
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||| |||
Sbjct: 92 tatttttattgctattagatgataaaacatgaatagtactttatgtgtgactaaatgttt 151
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 152 ttaattttttcataaatttttcaaataagacggacggtcaaacgttg 198
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||||||| |||||||||||||||| ||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 193 tttgaccgtccgtcttatttgaaaa 169
>RF01058;MIR806;AACV01000141.1/35700-35458 39947:Oryza sativa
Japonica Group
Length = 243
Score = 83.8 bits (42), Expect = 7e-16
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| ||| || ||||||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 86 attaatattttcattattgttagatgataaaacataaataatactttatgtgtgacttat 145
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 146 ctttttaatttttttcatattttttttaaataggacggacggtcaaacgttggacacgga 205
Query: 168 aac 170
|||
Sbjct: 206 aac 208
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 137 ataagacggacggttaaacgttggacacggaaac 170
|||||||||| || |||||||||||||||||||
Sbjct: 69 ataagacggatagtcaaacgttggacacggaaac 36
>RF01062;MIR812;AAAA02018796.1/31061-30888 39946:Oryza sativa Indica
Group
Length = 174
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||| |||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 124 attagtattgttattgttattagatgataaaacacgaatattacttcatgcgtgacttat 65
Query: 108 ttttt 112
|||||
Sbjct: 64 ttttt 60
>RF01062;MIR812;AAAA02015807.1/9766-9595 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||||||||| ||||||||||||| || | || ||||| ||||||||||||
Sbjct: 123 attactatttttattgtcgttagatgataaaacatgattactactttatgcgtgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| |||| |||||||| ||||||||||| |||||||||||
Sbjct: 63 ctttttaatttttttcataattttttcaaataagatggacggttaaatattggacacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;DQ280619.1/7388-7543 39946:Oryza sativa Indica Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||| || |||| ||||| ||| |||||| | |||||
Sbjct: 112 tatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttt 53
Query: 113 nnnnnnntttcataaaatttttaaataagacgga 146
||||||||| |||||||||||||||||
Sbjct: 52 taatatttttcataaattttttaaataagacgga 19
>RF01062;MIR812;AAAA02018371.1/438-593 39946:Oryza sativa Indica
Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||
Sbjct: 112 attagtatttttattgttattagatgataaaatataaatagtactttatgtgtgact 56
>RF01062;MIR812;AAAA02000580.1/21057-21210 39946:Oryza sativa Indica
Group
Length = 154
Score = 81.8 bits (41), Expect = 3e-15
Identities = 88/106 (83%)
Strand = Plus / Minus
Query: 65 tattagatgataaaatataaatattacttcatgcgtgacttaatttttnnnnnnntttca 124
||||||||||||||| ||||||||||||| || |||||||| ||||| ||||
Sbjct: 106 tattagatgataaaacataaatattactttataggtgacttattttttaaaatattttcg 47
Query: 125 taaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||| ||||||||||||| |||| ||| |||||||||||||||||
Sbjct: 46 taaatattttaaataagacagacgattatacgttggacacggaaac 1
>RF01062;MIR812;AP005804.2/14133-13961 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| ||||| | | ||||||||
Sbjct: 122 attaatatttttattgttattagatgataaaatataaatagtactttgtacatgacttaa 63
Query: 108 ttttt 112
|||||
Sbjct: 62 ttttt 58
>RF01062;MIR812;AAAA02014866.1/8003-8166 39946:Oryza sativa Indica
Group
Length = 164
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||| ||||||||||||||||||| ||||| || |||||||||
Sbjct: 114 attagtatttttattgttatgagatgataaaatataaatagtactttatacgtgacttat 55
Query: 108 ttttt 112
|||||
Sbjct: 54 ttttt 50
>RF01062;MIR812;AP008208.1/34975479-34975627 39947:Oryza sativa
Japonica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||||
Sbjct: 99 attactatttttattgttattagatgataaaatatgaatagtactttatgtgtgact 43
>RF01062;MIR812;AP008210.1/16303562-16303402 39947:Oryza sativa
Japonica Group
Length = 161
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 112 attagtattttgtttgttattagatgataaaatataaataatactttatgcgtgacttat 53
Query: 108 ttttt 112
|||||
Sbjct: 52 ttttt 48
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 133 ttaaataagacggacggttaaacgttggacacggaaac 170
|||||||||||||||| | ||| ||||||||| |||||
Sbjct: 124 ttaaataagacggacgatcaaatgttggacacagaaac 161
>RF01062;MIR812;ABRL01001420.1/1095-922 65489:Oryza barthii
Length = 174
Score = 81.8 bits (41), Expect = 3e-15
Identities = 97/118 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||| |||||||||||||||||| |||| ||||| ||| |||||| |
Sbjct: 123 attactatttttattgctattagatgataaaatatgaatagtactttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| | ||||||||||||||||||| |||| || |||||||| |||||
Sbjct: 63 ttttttaaaaaaaattataaaatttttaaataagatggacagtcaaacgttgaacacg 6
>RF01062;MIR812;AP002522.1/23327-23155 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| || ||| |||||| || | || ||||| ||||||||||||
Sbjct: 122 attagtatttttattgttgttcgataataaaacatgattaatactt-atgcgtgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| |||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 63 tttttaaatttttttcataatttttttaaataagacggacggtcaaacgttggacacg 6
>RF01062;MIR812;AC069158.6/136626-136465 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 102/123 (82%), Gaps = 7/123 (5%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| ||||||||||||| || | || ||||| ||||||||||||
Sbjct: 116 attagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgacttat 57
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 56 atttt-------tttcataattttttcaaataagacggacggtcaaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AACV01012903.1/1770-1598 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct: 124 attagtatttttattattattagatgataaaatatgaataatactttatgcgtgacttaa 65
Query: 108 ttttt 112
||||
Sbjct: 64 ctttt 60
>RF01062;MIR812;AC105729.2/7494-7320 39947:Oryza sativa Japonica
Group
Length = 175
Score = 81.8 bits (41), Expect = 3e-15
Identities = 97/118 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||
Sbjct: 123 attagtatttttattgctattagatgataaaatatgaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
| ||| ||||| |||| ||| ||||||||||| |||| ||||||||| ||||
Sbjct: 63 tatttttaattttttcacaaaaatttcaaataagacgggcggtcaaacgttgggcacg 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaa 39
||||||||| |||||||| |||||||||||||||
Sbjct: 7 gtgcccaacgtttgaccgcccgtcttatttgaaa 40
>RF01062;MIR812;AP008207.1/7388120-7387948 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 122 attactatttttattgttattagatgataaaacataaatagtactttatgtgtgact 66
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ttgaccgtccgtcttatttgaaaa 40
||||||||||||||||||||||||
Sbjct: 18 ttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP002094.1/81339-81168 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| ||||| ||| ||||| |||
Sbjct: 123 attattatttttattgttattagatgataaaacatgaataatactttatgtgtgac-taa 65
Query: 108 tttttnnnnnnntttcataaaat-ttttaaataagacggacggttaaacgttggacac 164
||||| ||| ||||| | |||||||||| ||||||||| |||||||||||||
Sbjct: 64 ttttttaaatttttttataaattattttaaataaaacggacggtcaaacgttggacac 7
>RF01062;MIR812;ABRL01000250.1/11552-11704 65489:Oryza barthii
Length = 153
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 94 ttttattgttattaggtgataaaatataaatattactttatgtgtgactaaattttt 38
>RF01062;MIR812;AP004817.3/57747-57574 39947:Oryza sativa Japonica
Group
Length = 174
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
||||||||| ||||||||||||||| ||||||| || || ||| | |||| |||||
Sbjct: 116 tttttattgatattagatgataaaacataaataatattttatgtgcgactatttttttta 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 56 gtttttttcataaattttttaaataagacggacggtcaaacgttagacacgga 4
>RF01062;MIR812;AAAA02031075.1/4258-4434 39946:Oryza sativa Indica
Group
Length = 177
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 51 tttcataaaattttcaaataagatggacggttaaacgttggacacgga 4
>RF01062;MIR812;AC136218.2/76973-77145 39947:Oryza sativa Japonica
Group
Length = 173
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 123 attagtatttttattgctattagatgataaaacataaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttgg 160
| ||| ||||| ||| |||| |||||||| ||||||| |||||||||
Sbjct: 63 tattttcaaatttttcacaaatttttcaaataagatggacggtcaaacgttgg 11
>RF01062;MIR812;AAAA02023310.1/41630-41795 39946:Oryza sativa Indica
Group
Length = 166
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||| ||||||||||||| || | || || || ||||||||||| ||||
Sbjct: 118 tatttttattgttgttagatgataaaacatgattaatattttatgcgtgacttgtctttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
|||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 58 taatttttttcataatttttttaaataagacggacggttaaacgttgggcatggaaa 2
>RF01062;MIR812;AAAA02003721.1/15438-15265 39946:Oryza sativa Indica
Group
Length = 174
Score = 79.8 bits (40), Expect = 1e-14
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| |||||||||||||||| ||||||| ||||| ||| |||||| |
Sbjct: 123 attattatttttattattattagatgataaaacataaatagtactttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataa 140
||||| |||||||||||||||||||||
Sbjct: 63 tttttaaaaaattttcataaaatttttaaataa 31
>RF01062;MIR812;AC107085.2/163720-163883 39947:Oryza sativa Japonica
Group
Length = 164
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/101 (84%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| |||||||||||||||| ||||||| || || |||||||||| |
Sbjct: 118 attagtatttttattattattagatgataaaacataaatagtaatttatgcgtgactaat 59
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacg 148
||||| |||||| ||||||||||||||||||||||
Sbjct: 58 tttttaatgttttttcat-aaatttttaaataagacggacg 19
>RF01062;MIR812;AAAA02034631.1/1636-1467 39946:Oryza sativa Indica
Group
Length = 170
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/120 (83%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||| |||||||||||||||||||||| || |||| ||||| ||| |||||| |
Sbjct: 120 attagtattcttattgttattagatgataaaacattaataatactttatgtgtgact--a 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 62 ttttttttatttttt-ataaattttttaaataagacggatggtcaaacgttggacacgga 4
>RF01062;MIR812;AACV01010653.1/22675-22848 39947:Oryza sativa
Japonica Group
Length = 174
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/121 (82%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattac-ttcatgcgtgactta 106
|||||||||||||||||||||||||||||||| ||||||| ||| || | | ||| || |
Sbjct: 124 attactatttttattgttattagatgataaaacataaatagtacttttaagtgtggctaa 65
Query: 107 atttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
|||||| ||||||| |||| |||||| |||||||||||||||||||| ||||
Sbjct: 64 attttttaaaaaaaatcataaatttttcaaataaaacggacggttaaacgttggatacgg 5
Query: 167 a 167
|
Sbjct: 4 a 4
>RF01062;MIR812;AAAA02008236.1/25307-25139 39946:Oryza sativa Indica
Group
Length = 169
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgac 103
|||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||
Sbjct: 121 attagtatttttattgttattagatgataaaatatgaataatacttcatgcttgac 66
>RF01062;MIR812;AAAA02029330.1/4924-4752 39946:Oryza sativa Indica
Group
Length = 173
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||| ||||| ||||||| ||||| ||| |||||| ||
Sbjct: 123 attagtatttttattgctattagatgttaaaacataaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttgg 160
| ||| ||||| |||||||| ||||||||||||| || |||||||||
Sbjct: 63 tattttcaattttttcacaaaattttcaaataagacggacagtcaaacgttgg 11
>RF01062;MIR812;AP005925.3/14919-14762 39947:Oryza sativa Japonica
Group
Length = 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 107 attagtatttttgttgttattagatgataaaatatgaatagtactttatgcgtgacttat 48
Query: 108 tttt 111
||||
Sbjct: 47 tttt 44
>RF01062;MIR812;AACV01008044.1/10987-11152 39947:Oryza sativa
Japonica Group
Length = 166
Score = 79.8 bits (40), Expect = 1e-14
Identities = 94/113 (83%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 59 tattgttattagatgataaaatataaatattacttcatgcgtgacttaa-tttttnnnnn 117
||||||| ||||||||||||| || | || ||||| |||||||||||| |||||
Sbjct: 113 tattgttgttagatgataaaacatgattaatactttatgcgtgacttatctttttaattt 54
Query: 118 nntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| |||| |||||||||||||||| |||||||||||||||||||
Sbjct: 53 tttttcataattttttcaaataagacggacggtcaaacgttggacacggaaac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP008208.1/14599693-14599861 39947:Oryza sativa
Japonica Group
Length = 169
Score = 79.8 bits (40), Expect = 1e-14
Identities = 97/116 (83%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| ||||||| || || ||| |||||| |
Sbjct: 120 attactatttttattgttattagatgataaaacataaataatattttatgtgtgact--a 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggaca 163
||||| ||| ||| |||||||||| || ||||||||| ||||||||||||
Sbjct: 62 tttttcaattttttttatataatttttaaa-aaaacggacggtcaaacgttggaca 8
>RF01062;MIR812;AP005680.3/12832-12659 39947:Oryza sativa Japonica
Group
Length = 174
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 124 ataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 47 ataaaatttttaaataagacggacggtcaaacgttggacacgga 4
>RF01062;MIR812;AP008218.1/14895548-14895379 39947:Oryza sativa
Japonica Group
Length = 170
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||| |||||||| ||||||| ||||| |||||||||||| |||||
Sbjct: 116 tatttttattgttattaggtgataaaacataaatagtactttatgcgtgacttatttttt 57
>RF01062;MIR812;AP003928.3/31649-31478 39947:Oryza sativa Japonica
Group
Length = 172
Score = 79.8 bits (40), Expect = 1e-14
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||| ||||| ||||||||| || |||||||||| ||| |||||| ||
Sbjct: 123 attactatttttattgctattaaatgataaaacatgaatattactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacg 144
| ||| ||||| |||||||||||||||||||
Sbjct: 63 tattttcaattttttcacaaaatttttaaataagacg 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 130 tttttaaataagacggacggttaaacgttggacacgga 167
||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 132 tttttaaataaaacggacggtcaaatgttgggcacgga 169
>RF01062;MIR812;AAAA02027581.1/1070-897 39946:Oryza sativa Indica
Group
Length = 174
Score = 79.8 bits (40), Expect = 1e-14
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 55 tttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnn 114
||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||| |||
Sbjct: 116 tttttattgctattagatgataaaatatgaatagtactttatgtgtgactaaatattttt 57
Query: 115 nnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
||||||||| ||||||||||||| |||| || ||||||||
Sbjct: 56 aattttttcataaattttttaaataagatggacagtcaaacgttg 12
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 87 attagtatttttattgctattagatgataaaacatgaataatactttatgtgtgactaaa 146
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttgg 160
| ||| ||||||||| | || |||||||||||||||| |||||||||
Sbjct: 147 tatttttaattttttcataaattcttcaaataagacggacggtcaaacgttgg 199
Score = 48.1 bits (24), Expect = 4e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 8 tgcccaac-tttgaccgtccgtcttatttgaa 38
|||||||| |||||||||||||||||||||||
Sbjct: 202 tgcccaacgtttgaccgtccgtcttatttgaa 171
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||| ||| |||||||||||||||| ||||||||
Sbjct: 81 aaaaatttcaaataagacggacggtcaaacgttg 48
>RF01062;MIR812;AAAA02000846.1/2365-2538 39946:Oryza sativa Indica
Group
Length = 174
Score = 77.8 bits (39), Expect = 4e-14
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||||| ||||| | |||||| |
Sbjct: 123 attaatatttttattgttattagatgataaaatataaatagtactttgtatgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
|| || | ||||||| |||| |||||||||||||||| ||||||||
Sbjct: 63 ttattttaattttctcataaatttttcaaataagacggacggtcaaacgttg 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02030930.1/2297-2465 39946:Oryza sativa Indica
Group
Length = 169
Score = 77.8 bits (39), Expect = 4e-14
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 123 attaatatttttattgctattagatgataaaacataaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
| ||| ||||| ||| ||| |||||||||||||||| ||||||||
Sbjct: 63 tatttttaaatttttcacaaattttacaaataagacggacggtcaaacgttg 12
>RF01062;MIR812;AAAA02003837.1/6975-6810 39946:Oryza sativa Indica
Group
Length = 166
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| ||||||||||||||| ||||||||||||||||||| || || ||||||||||||
Sbjct: 117 attagtatttttattgttatgagatgataaaatataaatagtaatttatgcgtgactta 59
>RF01062;MIR812;AAAA02014723.1/9789-9959 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 4e-14
Identities = 101/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 121 attaatatttttattgttattagatgataaaatataattagtactttatgcgcgactt-- 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||||||| ||||||||||||| |||| | ||||||||||||| ||
Sbjct: 63 tttttttagttttttcatagtttttttaaataagatagacgatgaaacgttggacacaga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02030956.1/46486-46317 39946:Oryza sativa Indica
Group
Length = 170
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||
Sbjct: 122 attagtatttttattgttattagattataaaacataaatagtactttatgcgtgactta 64
>RF01062;MIR812;AAAA02008165.1/41728-41556 39946:Oryza sativa Indica
Group
Length = 173
Score = 77.8 bits (39), Expect = 4e-14
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 54 atttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttn 113
|||| ||||| |||||||||||||||||| |||| ||||| ||| |||||| ||| |||
Sbjct: 117 atttctattgctattagatgataaaatatgaatagtactttatgtgtgactaaatatttt 58
Query: 114 nnnnnntttcataaaatttttaaataagacggacggttaaacgttgga 161
||| |||||||||| |||||||||||||||| |||| |||||
Sbjct: 57 taatttttttataaaattttcaaataagacggacggtcaaacattgga 10
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP008208.1/14869928-14869757 39947:Oryza sativa
Japonica Group
Length = 172
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/116 (82%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| |||| || || ||| |||||| ||
Sbjct: 122 attagtatttttattgttattagatgataaaatatgaatagtattttatgtgtgactaaa 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggaca 163
||||| || |||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 62 tttttaaaaaaaatt-gtaaattttttaagtaagacggacgattaaacgttggaca 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttggaca 163
|||||||| |||||||||| ||||| ||||||||||||
Sbjct: 128 aaaattttcaaataagacgaacggtcaaacgttggaca 165
>RF01062;MIR812;AP001081.1/66356-66185 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| ||||||||||||||||||||||| | || ||||| ||||||||||| |
Sbjct: 122 attaatattttcattgttattagatgataaaatatgattaatactttatgcgtgactt-a 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
||||| ||| |||| |||||||||||||| |||||| ||||||||
Sbjct: 63 tttttttaatttttttataatttttttaaataagacagacggtgaaacgttg 12
>RF01062;MIR812;AAAA02032459.1/5529-5364 39946:Oryza sativa Indica
Group
Length = 166
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| ||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||
Sbjct: 118 attagtatttttattgttataagatgataaaatatgaatagtactttatgcgtgactta 60
>RF01062;MIR812;AP008207.1/7005737-7005911 39947:Oryza sativa
Japonica Group
Length = 175
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 58 ttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||||| ||||||| ||||| |||||||||| |||||||
Sbjct: 111 ttattgttattagatgataaaacataaatagtactttatgcgtgactaaattttt 57
>RF01062;MIR812;AAAA02004305.1/15807-15633 39946:Oryza sativa Indica
Group
Length = 175
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 121 ttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 50 ttcataaatttttcaaataagacggacggttaaacgttggacacgga 4
>RF01062;MIR812;AP005395.3/150535-150362 39947:Oryza sativa Japonica
Group
Length = 174
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||||||||||||| |||||||||| ||| | ||||||
Sbjct: 121 attaatatttttattgttattagatgataaaatatgaatattactttatgtgcgactta 63
>RF01062;MIR812;AC112159.2/7868-7704 39947:Oryza sativa Japonica
Group
Length = 165
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttt 111
||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||| ||||
Sbjct: 112 tatttttattgttattagatgataaaacataaatagtactttatgtgtgacttattttt 54
>RF01062;MIR812;AP004165.3/53439-53268 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 4e-14
Identities = 99/120 (82%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||| |||||| || |||| ||||| ||| || ||| |
Sbjct: 122 attaatatttttattgttattagataataaaacatgaatagtactttatgtgtaact-at 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||| |||| |||||| ||||||||||||||||||||||||||
Sbjct: 63 tttttaaaatttttttataaacttttcaaataaaacggacggttaaacgttggacacgga 4
>RF01062;MIR812;AP008214.1/2886870-2887037 39947:Oryza sativa
Japonica Group
Length = 168
Score = 77.8 bits (39), Expect = 4e-14
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
||||||||||||||| ||||||||||||||||||| |||| ||||| ||| ||||| |
Sbjct: 120 attactatttttattattattagatgataaaatatgaataatactttatgtatgactaat 61
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
||||| ||||||||| ||||||||||| ||| | ||| ||||||||
Sbjct: 60 ttttttaaaatttttcataaattttttaaataaaacgaatggtcaaacgttg 9
>RF01062;MIR812;AP008217.1/5375990-5376154 39947:Oryza sativa
Japonica Group
Length = 165
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||
Sbjct: 117 attagtatttttattgttattagattataaaacataaatagtactttatgcgtgactta 59
>RF01062;MIR812;AP003747.5/95528-95357 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 51 tttcataatttttttaaataagacggacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AP006525.2/46687-46848 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| ||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||
Sbjct: 121 attagtatttttgttgttataagatgataaaacataaatattactttatgcgtgactta 63
>RF01062;MIR812;AAAA02022475.1/22256-22085 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 4e-14
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 123 attagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
| ||| ||||| ||| |||| |||||||||||||||| ||||||||
Sbjct: 63 tgttttcaaatttttcacaaatttttcaaataagacggacggtcaaacgttg 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;ABRL01000685.1/7786-7614 65489:Oryza barthii
Length = 173
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||| |||||||||||||||||||||||||||||| || |||||||
Sbjct: 51 tttcataaattttttaaataagacggacggttaaacgttgaacccggaaac 1
>RF01062;MIR812;AC133778.4/73481-73322 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||| |||||||||||||||||||||||||||||| |||| ||||| | ||||||||||
Sbjct: 112 attagtatttttattgttattagatgataaaatatgaatagtactttacgcgtgactta 54
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02025458.1/13231-13395 39946:Oryza sativa Indica
Group
Length = 165
Score = 77.8 bits (39), Expect = 4e-14
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||| ||||||||||||||||| |||| ||||| ||| ||||||||
Sbjct: 123 attagtatttttattgtcattagatgataaaatatgaataatactttatgtttgacttaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaac 155
|||| ||| ||||| |||| |||||||||||||||| ||||
Sbjct: 63 cttttaaaatttttttataaatttttcaaataagacggacggtcaaac 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC112209.4/58229-58057 39947:Oryza sativa Japonica
Group
Length = 173
Score = 77.8 bits (39), Expect = 4e-14
Identities = 98/120 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| ||||||||||||||||||| |||| |||||||| |||||| |
Sbjct: 123 attaatatttttatttttattagatgataaaatatgaatagcacttcatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| || | ||||||| |||| |||||||||||||||| |||||| ||||||||
Sbjct: 63 ttattttaattttctcataaatttttcaaataagacggacggtcaaacgtcagacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 77.8 bits (39), Expect = 4e-14
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| ||
Sbjct: 159 attagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgactaaa 100
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttg 159
| ||| ||||| ||| |||| |||||||||||||||| ||||||||
Sbjct: 99 tgtttttaattttttcacaaatttttcaaataagacggacggtcaaacgttg 48
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
||||||||||||||||||||||||| ||||||||
Sbjct: 165 aaaatttttaaataagacggacggtcaaacgttg 198
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 53 tttgaccgtccgtcttatttgaaaa 77
>RF01062;MIR812;AACV01019908.1/1118-947 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| |||||| ||||||||| | || ||||| |||||| |||||
Sbjct: 123 attagtattttcattgttgttagataataaaatatgattaatactttatgcgtaacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||| || |||||||||||||||||||||||||||||||| ||| |
Sbjct: 63 ctttttaaattttttcaaaatttttttaaataagacggacggttaaacgttggatacgaa 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02020957.1/2475-2646 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/123 (82%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| || ||||||||||||| || | || ||||| ||||||||||||
Sbjct: 124 attagtatttttattattgttagatgataaaacatgattaatactttatgcgtgacttat 65
Query: 108 -tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgg 166
||||| ||| |||| |||| |||||||||||||||| |||||||||||||||
Sbjct: 64 ctttttaattattttttataattttttaaaataagacggacggtcaaacgttggacacgg 5
Query: 167 aaa 169
|||
Sbjct: 4 aaa 2
>RF01062;MIR812;AP008213.1/23009525-23009694 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 122 tcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 49 tcataaaattttcaaataagacggacggtcaaacgttggacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC144735.2/88624-88798 39947:Oryza sativa Japonica
Group
Length = 175
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacggaaa 169
|||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 51 tttcataatttttttaaataagagggacggttaaacgttggacacggaaa 2
>RF01062;MIR812;AAAA02002869.1/4145-4316 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| || ||| |||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 123 attagtattttcatcgttgttagatgataaaatatgattaatactttatgcgcgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 63 ctttttaatcttattcataattttttcaaataagacggacggtcaaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02017391.1/13558-13727 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/122 (81%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| |||||||||||||||| || | || ||||| ||||||||||||
Sbjct: 121 attagtatttttatttttattagatgataaaacatgattaatactttatgcgtgacttat 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 61 ctttttaatttttttcgtat--ttttttaataagacggacggttaaacattggacacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;CR855138.1/21145-20979 4530:Oryza sativa (rice)
Length = 167
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattactt 93
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 124 attagtatttttattgttattagatgataaaatatgaatattactt 79
>RF01062;MIR812;AAAA02001201.1/17176-17348 39946:Oryza sativa Indica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 71 atgataaaatataaatattacttcatgcgtgacttaatttttnnnnnnntttcataaaat 130
||||||||| || |||| ||||| || ||||||||| ||||| ||| |||| |
Sbjct: 100 atgataaaacatgaataatactttatacgtgacttatttttttaattatttttataactt 41
Query: 131 ttttaaataagacggacggttaaacgttggacacggaaa 169
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 40 ttttaaataagacggacggtgaaacgttggacacggaaa 2
>RF01062;MIR812;AAAA02000445.1/1548-1714 39946:Oryza sativa Indica
Group
Length = 167
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattactt 93
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 118 attagtatttttattgttattagatgataaaatatgaatattactt 73
>RF01062;MIR812;AC092390.3/19416-19244 4530:Oryza sativa (rice)
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||| |||||||||||||| ||||||| ||| ||||| ||| |||||| |||||||
Sbjct: 118 tatttttgttgttattagatgacaaaatatgaatggtactttatgtgtgactaaattttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||| ||||| ||||||||||||||| ||||| ||| |||| |||||||
Sbjct: 58 taaaattttttataaattttttaaataagacgaacggtcaaaagttgaacacgga 4
>RF01062;MIR812;AAAA02014674.1/13049-12877 39946:Oryza sativa Indica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
||||||||||||||||||||||||||| || |||| ||||||| ||||||||||
Sbjct: 119 tatttttattgttattagatgataaaacatgaataatacttcacgcgtgactta 66
>RF01062;MIR812;FJ581045.1/55565-55398 4529:Oryza rufipogon
Length = 168
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
|||| |||| |||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 118 attagtattgttattgttattagatgataaaacaagaatattacttcatgcgtgactt 61
>RF01062;MIR812;AACV01024311.1/12955-12785 39947:Oryza sativa
Japonica Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactt 105
|||| |||||||||||||||||||||||||||||| ||||||| || ||| |||||||
Sbjct: 121 attagtatttttattgttattagatgataaaatatgaatattattttatgtgtgactt 64
>RF01062;MIR812;AACV01019971.1/2544-2716 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||||||||||||| || | || ||||| ||| |||| |||
Sbjct: 123 attagtatttttattgttgttagatgataaaacatgattaatactttatgtgtgaattat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||| |||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 63 acttttaaattttttcataatttttttaaataagacggacagtcaaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AP004592.3/104215-104382 39947:Oryza sativa Japonica
Group
Length = 168
Score = 75.8 bits (38), Expect = 2e-13
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 118 attagtatttttattgttattagatgataaaacataaatagtactttatgtgtgactatt 59
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacgga 146
|||| |||||||||||||| ||||||||||||
Sbjct: 58 ttttaaaatatttttcataaaattttcaaataagacgga 20
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actttgaccgtccgtcttatttgaaaa 40
||||||||| |||||||||||||||||
Sbjct: 10 actttgaccatccgtcttatttgaaaa 36
>RF01062;MIR812;AP003855.3/129569-129403 39947:Oryza sativa Japonica
Group
Length = 167
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||| |||||||||||||||||||||||| |||||||| |||||| ||| | ||
Sbjct: 122 attactatttatattgttattagatgataaaatatgaatattac-tcatgcatgaatcaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
|||| ||| |||| | |||||||||||| ||||||||||||||
Sbjct: 63 gtttttgattttttttataatttctttaaataagacagacggttaaacgtt 13
>RF01062;MIR812;AP004461.3/81447-81277 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||| ||||||||||||||||| || || ||| | ||| | | |||
Sbjct: 118 tatttttattgttattatatgataaaatataaatagtattttatgtataactaattattt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||||| ||||||||||||||| ||||| |||||||| |||||||
Sbjct: 58 ttatttttttcataaattttttaaataagacgaacggtcaaacgttgaacacgga 4
>RF01062;MIR812;AACV01008267.1/8880-8706 39947:Oryza sativa Japonica
Group
Length = 175
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||
Sbjct: 118 tatttttattgttatgagataataaaatataaatagtactttatgcgtgactta 65
>RF01062;MIR812;AP003286.3/51081-50906 39947:Oryza sativa Japonica
Group
Length = 176
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattactt 93
|||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 126 attaatatttttattgttattagatgataaaatataaatagtactt 81
>RF01062;MIR812;AAAA02014905.1/27291-27462 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/120 (83%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||||||||||||| |||| || || ||| | || ||||
Sbjct: 120 attagtatttttgttgttattagatgataaaatatgaataatattttatgtgcga-ttaa 62
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| ||| ||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 61 tttttaactt--ttttataaattttttaaataagacggacagtcaaacgttggacacgga 4
>RF01062;MIR812;AP004679.3/40209-40379 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/123 (82%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| |||||||||||||||| | || ||||| ||||||||||||
Sbjct: 122 attagtatttttattgttgttagatgataaaatatgattaatactttatgcgtgacttat 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||| | ||||||||||||||||||||| |||| ||| ||||| |
Sbjct: 62 ctttttaattattttcat-atttttttaaataagacggacggtcaaacattgaacacgaa 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02000403.1/21361-21190 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/123 (82%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| ||||||||||||| |||| || ||||| |||||||| |||
Sbjct: 122 attagtattttcattgttgttagatgataaaacataattaatactttatgcgtgatttat 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||||| ||||||||||||| ||||||| ||||||||||||||||
Sbjct: 62 ctttttaatttttttcatatt-tttttaaataagatggacggtcaaacgttggacacgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02030068.1/20717-20889 39946:Oryza sativa Indica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||| | |||||||||||||||| |||| || || |||| |||||||
Sbjct: 123 attagtatttttattatagttagatgataaaatatgaataatattttatgcatgacttat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| |||||||| |||| |||||||||||||||| ||||||| |||| |||
Sbjct: 63 tttttaaaattttttcataattttttcaaataagacggacggtcaaacgttagacatgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC107314.1/58368-58197 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| ||||| ||| ||||||||
Sbjct: 124 attaatatttttattgttattagatgataaaacatgaatagtactttatgtgtgacttat 65
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacgga 146
|||| ||||| |||||||| ||||||||||||
Sbjct: 64 gtttttaaattttttcaaaaaattttcaaataagacgga 26
>RF01062;MIR812;AAAA02016278.1/9103-9277 39946:Oryza sativa Indica
Group
Length = 175
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||| | ||||||||||| || | || ||||| |||||||||||
Sbjct: 123 attagtattttcattgttgtgagatgataaaacatgattaatactttatgcgtgactttg 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||| || ||||| ||||||||||||||||||||| |||||||||||| |||
Sbjct: 63 tttttttaatttttccataatttttttaaataagacggacggtcaaacgttggacatgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AACV01019002.1/7055-6886 39947:Oryza sativa Japonica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||| ||||||| |||||| || || ||| |||||| ||
Sbjct: 120 attagtatttttattgttattagaagataaaacgtaaatagtattttatgtgtgactaaa 61
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgtt 158
| ||| |||||||| ||||||||||||||||||||| |||||||
Sbjct: 60 tattttcaaatttttcataatttttttaaataagacggacggtcaaacgtt 10
>RF01062;MIR812;AC133337.5/20583-20411 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||||||||||||||||||||| || || ||| |||||| |
Sbjct: 123 attagtatttttattgttgttagatgataaaatataaatagtattttatgtgtgactaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
| ||| ||| |||||||||| ||||||||| |||| | |||| |||||| ||||
Sbjct: 63 tatttttaatttttttataaaattttcaaataagacagacgatcaaacattggacgcgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AAAA02024544.1/2132-1963 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||| ||||||||| || | || ||||| || ||||||||
Sbjct: 123 attagtatttttattgttgttaaatgataaaacatgattaatactttatacgtgacttgt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| |||||||| ||||||||||||||||||||| |||||||||||| |||
Sbjct: 63 ctttttaatttttttcataatttttttaaataagacggacggtcaaacgttggacatgga 4
Query: 168 aac 170
|||
Sbjct: 3 aac 1
>RF01062;MIR812;AC093088.4/1764-1591 39947:Oryza sativa Japonica
Group
Length = 174
Score = 75.8 bits (38), Expect = 2e-13
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| |
Sbjct: 124 attagtatttttattgttattagatgataaaacataaatagtactttatgtgtgactaat 65
Query: 108 tttttnnnnnnntttcataaaatttttaaataaga 142
||||| |||||||| |||||||||||||
Sbjct: 64 tttttaaatatttttcataatttttttaaataaga 30
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 75.8 bits (38), Expect = 2e-13
Identities = 114/143 (79%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaannnnnnn--attactatttttattgttattagatg 73
||||||||||||||||||||||||| |||| ||||||||||| |||||||||
Sbjct: 53 tttgaccgtccgtcttatttgaaaattttttatgattagtatttttattgctattagatg 112
Query: 74 ataaaatataaatattacttcatgcgtgacttaatttttnnnnnnntttcataaaatttt 133
|||||| || |||| ||||| ||| |||||| ||| ||| ||||| ||| ||||
Sbjct: 113 ataaaacatgaatagtactttatgtgtgactaaatgtttttaattttttcacaaattttt 172
Query: 134 taaataagacggacggttaaacg 156
|||||||||||||||| |||||
Sbjct: 173 caaataagacggacggtcaaacg 195
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||||||| |||||||||||||||| ||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 193 tttgaccgtccgtcttatttgaaaa 169
>RF01062;MIR812;FJ032632.1/66474-66642 52545:Oryza alta
Length = 169
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||||||||||||||||||||||||||||||| || |||| ||||| ||| ||||||
Sbjct: 123 attactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AACV01021924.1/376-205 39947:Oryza sativa Japonica
Group
Length = 172
Score = 73.8 bits (37), Expect = 7e-13
Identities = 96/118 (81%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||| ||| || ||||||||||||| |||| || || || |||||||||||| ||||
Sbjct: 118 tattttcattattgttagatgataaaacataattaatattttatgcgtgacttatctttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| |||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 58 taatttttttcataatttttttaaataagtcggacggtcaaacgttggacacagaaac 1
>RF01062;MIR812;AAAA02028215.1/3688-3522 39946:Oryza sativa Indica
Group
Length = 167
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 41 tttttaaataagacggacggttaaacgttgggcacggaaac 1
>RF01062;MIR812;AACV01014850.1/52883-52712 39947:Oryza sativa
Japonica Group
Length = 172
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 41 tttttaaataagacggacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AAAA02007524.1/33468-33642 39946:Oryza sativa Indica
Group
Length = 175
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||||||||||||||||||||||||||||||| || |||| ||||| ||| ||||||
Sbjct: 125 attactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 69
>RF01062;MIR812;AC123897.3/101395-101565 39947:Oryza sativa Japonica
Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 127 aaaatttttatataagacggacagttaaacgttggacacggaaac 171
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| |||| |||||||||||||||| |||||||||||||||||||
Sbjct: 51 tttcataattttttcaaataagacggacggtcaaacgttggacacggaaac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AC093953.2/91582-91415 39947:Oryza sativa Japonica
Group
Length = 168
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| || || |||||||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatagtattttatgcgtgacttaa 61
Query: 108 ttttt 112
||||
Sbjct: 60 atttt 56
>RF01062;MIR812;AACV01005485.1/13897-13720 39947:Oryza sativa
Japonica Group
Length = 178
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| ||
Sbjct: 122 attagtatttttattgctattagatgataaaacataaatactactttatgtgtgactaaa 63
Query: 108 ttttt 112
|||||
Sbjct: 62 ttttt 58
>RF01062;MIR812;AP004087.3/81846-82020 39947:Oryza sativa Japonica
Group
Length = 175
Score = 73.8 bits (37), Expect = 7e-13
Identities = 96/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||| |||||||||||||||| || |||| ||||| ||| | |||| | |||||
Sbjct: 120 tatttttattattattagatgataaaacatgaatagtactttatgtgcgactaacttttt 61
Query: 113 nnnnnnntttc--ataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||||| ||||||||||| ||||||||| ||||||||||||||||
Sbjct: 60 ttttaattttctcataaattttttaaataaaacggacggtcaaacgttggacacgga 4
>RF01062;MIR812;AP008218.1/27388940-27388769 39947:Oryza sativa
Japonica Group
Length = 172
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| |||||||||||||||||||||||||||||| ||||||| || ||| ||||||
Sbjct: 122 attagtatttttattgttattagatgataaaatatgaatattattttatgtgtgact 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgttg 159
|||| |||||||||||||| ||||||||||||||
Sbjct: 128 aaaaattttaaataagacgaacggttaaacgttg 161
>RF01062;MIR812;AP004886.3/56394-56566 39947:Oryza sativa Japonica
Group
Length = 173
Score = 73.8 bits (37), Expect = 7e-13
Identities = 102/125 (81%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||||||||||||| || | || ||||| ||||| ||||||
Sbjct: 125 attaatatttttattgttgttagatgataaaacatgattaatactttatgcgcgacttat 66
Query: 108 tttttnnnnnnntttcataaaattttt--aaataagacggacggttaaacgttggacacg 165
|||| ||| |||| ||||| |||||||||||||||| ||||||||||||||
Sbjct: 65 ctttttaattatttttataattttttttcaaataagacggacggtcaaacgttggacacg 6
Query: 166 gaaac 170
|||||
Sbjct: 5 gaaac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AAAA02007412.1/4704-4873 39946:Oryza sativa Indica
Group
Length = 170
Score = 73.8 bits (37), Expect = 7e-13
Identities = 98/120 (81%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||||||||||||| ||| ||| | ||| || |||
Sbjct: 120 attagtatttttattgttattagatgataaaatatgaattgtacgttatgtgtc---taa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| || ||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 63 ttctttttattttttcataaactttttaaataagacggacggtaaaacgttagacacgga 4
>RF01062;MIR812;AAAA02015875.1/7788-7616 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 7e-13
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnnn 115
|||||||||||||| ||||||||| ||||||| ||||| ||| |||||| | |||||
Sbjct: 115 ttttattgttattaaatgataaaacataaatagtactttatgtgtgactaattttttaaa 56
Query: 116 nnnntttcataaaatttttaaataagacggacggttaaacgttgga 161
|||||||| |||||||||||||| || ||| ||||||||||
Sbjct: 55 cttttttcataatttttttaaataagacagatggtcaaacgttgga 10
>RF01062;MIR812;AACV01018619.1/9349-9510 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||| ||||||||||||||||||||||||| |||| | || ||| |||| | |||||||
Sbjct: 117 tattattattgttattagatgataaaatatgaatagcattttatgtgtgaat-aattttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||| |||||||||||||| |||||||||| |||||||| |||||
Sbjct: 58 ttaattttttcataaatgttttaaataagacgaacggttaaacattggacacagaaac 1
>RF01062;MIR812;AP005575.3/42422-42604 39947:Oryza sativa Japonica
Group
Length = 183
Score = 73.8 bits (37), Expect = 7e-13
Identities = 96/118 (81%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||| ||||||||||||| |||| || || || |||||| |||| ||||
Sbjct: 118 tatttttattgttgttagatgataaaacataattaatattttatgcgtaacttgtctttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
|||||||| ||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 58 taatttttttcataatttttttaaataagacggacggtcaaacattgggcacggaaac 1
>RF01062;MIR812;AAAA02020749.1/22281-22455 39946:Oryza sativa Indica
Group
Length = 175
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||||||||||| |||||||||||||||||||||| |||| ||||| ||| ||||||
Sbjct: 125 attactatttttgttgttattagatgataaaatatgaatagtactttatgagtgact 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 tttttaaataagacggacggttaaacgttggaca 163
|||| |||||||||||||||| |||| |||||||
Sbjct: 135 ttttaaaataagacggacggtcaaactttggaca 168
>RF01062;MIR812;AY946550.1/36-207 4530:Oryza sativa (rice)
Length = 172
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| |||||||||||||||| |||| ||||| |||||||| ||||
Sbjct: 122 attagtatttttattgttgttagatgataaaatatgaataatactttatgcgtgatttaa 63
Query: 108 ttttt 112
||||
Sbjct: 62 ctttt 58
>RF01062;MIR812;AP005127.5/61470-61298 39947:Oryza sativa Japonica
Group
Length = 173
Score = 73.8 bits (37), Expect = 7e-13
Identities = 96/118 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| |||||||||||||||||| |||| ||||| ||| || ||| ||
Sbjct: 123 attattatttttattgctattagatgataaaatatgaatagtactttatgtgtaactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
| ||| ||||| |||||||| ||||||||||||||| ||| ||||| ||||
Sbjct: 63 tattttcaaatttttcacaaaattttctaataagacggacggtcaaatgttgggcacg 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 7 gtgcccaac-tttgaccgtccgtcttatttgaaaa 40
||||||||| ||||||||||||||||||| |||||
Sbjct: 7 gtgcccaacatttgaccgtccgtcttattagaaaa 41
>RF01062;MIR812;AAAA02018679.1/13500-13672 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 7e-13
Identities = 96/118 (81%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||| ||||||||||||| ||||||| ||||| | |||||||||| ||||
Sbjct: 118 tatttttattgttgttagatgataaaacataaataatactttacgcgtgacttatctttt 59
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||| ||| |||| |||||||||||||||| ||||||| || ||||||||
Sbjct: 58 taattttttttatatttttttcaaataagacggacggtcaaacgttagatacggaaac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP008209.1/13818681-13818846 39947:Oryza sativa
Japonica Group
Length = 166
Score = 73.8 bits (37), Expect = 7e-13
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||| |||||| || |||| ||||| ||| |||||| | |||||
Sbjct: 119 tatttttattgttattagataataaaacatgaatagtactttatgtgtgactaatttttt 60
Query: 113 nnnnnnntttcataaaatttttaaataagacgga 146
||||||||| |||||||||||||||||
Sbjct: 59 taatatttttcataaattttttaaataagacgga 26
>RF01062;MIR812;AL731763.1/85403-85574 4530:Oryza sativa (rice)
Length = 172
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| |||||||||||||||||||||||||||||| |||| || || ||||||||||
Sbjct: 125 attagtatttttattgttattagatgataaaatatgaatagtattttatgcgtgact 69
>RF01062;MIR812;AACV01002976.1/6404-6578 39947:Oryza sativa Japonica
Group
Length = 175
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| |||||||||||||||||||||||||||||| |||| ||||| ||| ||||||
Sbjct: 125 attaatatttttattgttattagatgataaaatatgaatagtactttatgtgtgact 69
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 130 tttttaaataagacggacggttaaacgttg 159
||||||||||||||| ||||| ||||||||
Sbjct: 135 tttttaaataagacgaacggtcaaacgttg 164
>RF01062;MIR812;AL713927.3/67261-67428 4530:Oryza sativa (rice)
Length = 168
Score = 73.8 bits (37), Expect = 7e-13
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||||||||||||| |||| ||| | || | ||||||| ||||
Sbjct: 116 tatttttattgttattagatgataaaatatgaataatacattatacatgacttatgtttt 57
Query: 113 nnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacggaaac 170
||| |||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 56 taaattttttaataaaa-ttttaaataagacggacgattaaa-attggacacggaaac 1
>RF01062;MIR812;AP001539.1/160255-160085 39947:Oryza sativa Japonica
Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/122 (81%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||| |||||||||||||||||||||| |||| ||||| || | ||||||||
Sbjct: 122 attagtatttttgttgttattagatgataaaatatgaatagtactttatacatgacttaa 63
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||| ||||| ||||||||||| || ||| || ||||||||| ||||||
Sbjct: 62 cttttaaattttttt-ataaattttttaaataaaacagactgtcaaacgttgggcacgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AACV01023281.1/4947-4778 39947:Oryza sativa Japonica
Group
Length = 170
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||| |||||| || |||| ||||| ||||||||||||
Sbjct: 121 attagtatttttattgttattagattataaaacatgaatagtactttatgcgtgacttat 62
Query: 108 ttttt 112
|||||
Sbjct: 61 ttttt 57
>RF01062;MIR812;AAAA02016433.1/5618-5782 39946:Oryza sativa Indica
Group
Length = 165
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||||||||| ||||||||||||||||| || ||| |||| ||||
Sbjct: 115 attagtatttttattgttattagataataaaatataaatattattttatgtgtga-ttaa 57
Query: 108 ttttt 112
|||||
Sbjct: 56 ttttt 52
>RF01062;MIR812;AP008209.1/6599969-6599799 39947:Oryza sativa
Japonica Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || ||| ||||| ||| | | || |
Sbjct: 122 attactatttttattgttattagatgataaaacatgtataatactttatgtggg-ctaat 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| ||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 63 ttttttaaagaaaatcataaattttttaaataagacggacggtcaaacgttggacacg 6
>RF01062;MIR812;AP005833.2/95735-95905 39947:Oryza sativa Japonica
Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 114 ttttattgttattagatgataaaatataaataatactttatgcgcaacttaactttt 58
>RF01062;MIR812;AAAA02001388.1/1048-1218 39946:Oryza sativa Indica
Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| || || ||| |||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaacatgaatagtaatttatgtgtgacttaa 63
Query: 108 ttttt 112
|||||
Sbjct: 62 ttttt 58
>RF01062;MIR812;AY946579.1/194-35 4530:Oryza sativa (rice)
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaac 170
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 41 tttttaaataagacggacggtcaaacgttggacacggaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaa 78
|||| ||||||||||||| ||||||||||||
Sbjct: 111 attagtatttttattgttgttagatgataaa 81
>RF01062;MIR812;AAAA02017615.1/8389-8232 39946:Oryza sativa Indica
Group
Length = 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||
Sbjct: 108 attactatttttattgttattaggtgataaaatatgaataatactttatgtgtgact 52
>RF01062;MIR812;AAAA02004223.1/3166-3338 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacac 164
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 51 tttcataatttttttaaataagacggacggttaaacgttggacac 7
>RF01062;MIR812;AAAA02029602.1/30944-31105 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||| ||||| |||||||| |||
Sbjct: 113 attaatatttttattgttattagatgataaaacatgaataatactttatgcgtgatttat 54
Query: 108 ttttt 112
|||||
Sbjct: 53 ttttt 49
>RF01062;MIR812;AAAA02037115.1/3854-3684 39946:Oryza sativa Indica
Group
Length = 171
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| ||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||
Sbjct: 123 attagtatttttattgttattaaatgataaaatataaataatactttatgtgtgact 67
>RF01062;MIR812;AAAA02016179.1/4117-4272 39946:Oryza sativa Indica
Group
Length = 156
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgact 104
|||| ||||||||||||||||||||||||||| || |||||||||| ||| ||||||
Sbjct: 108 attagtatttttattgttattagatgataaaacatgaatattactttatgtgtgact 52
>RF01062;MIR812;AP005883.3/41754-41913 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||||||||| | || || ||||| ||||||
Sbjct: 112 attagtatttttattgttattagatgataaaatataaacaatattttatgcgcgacttat 53
Query: 108 ttttt 112
|||||
Sbjct: 52 ttttt 48
>RF01062;MIR812;EU226785.1/3486-3661 39946:Oryza sativa Indica Group
Length = 176
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||| ||||||||||||||| || |||||||||| |||||||||||| |||||
Sbjct: 115 ttttattgatattagatgataaaacatgaatattactttatgcgtgacttatttttt 59
>RF01062;MIR812;DQ280674.1/7188-7361 4529:Oryza rufipogon
Length = 174
Score = 73.8 bits (37), Expect = 7e-13
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||| || |||||||||| ||| |||||| | |||||
Sbjct: 119 tatttttattgttattagatgataaaacatgaatattactttatgtgtgactaatttttt 60
Query: 113 nnnnnnntttcataaaatttttaaataagacgga 146
||| ||||| |||| ||||||||||||
Sbjct: 59 taatattttttataaatttttcaaataagacgga 26
>RF01062;MIR812;AAAA02030744.1/37877-38042 39946:Oryza sativa Indica
Group
Length = 166
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaa 169
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 41 tttttaaataagacggacggtcaaacgttggacacggaaa 2
>RF01062;MIR812;AACV01007421.1/4710-4538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 71.9 bits (36), Expect = 3e-12
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 16 tttgaccgtccgtcttatttgaaaannnnnnnattactatttttattgttattagatgat 75
||||||||||| |||||||| |||| |||| ||||| |||||||||||||||||
Sbjct: 157 tttgaccgtccatcttattttaaaaaaatattattaatatttctattgttattagatgat 98
Query: 76 aaaatataaatattacttcatgcgtgact 104
||||||| |||| ||||| ||| ||||||
Sbjct: 97 aaaatatgaatagtactttatgtgtgact 69
>RF01062;MIR812;AAAA02035158.1/27030-27199 39946:Oryza sativa Indica
Group
Length = 170
Score = 71.9 bits (36), Expect = 3e-12
Identities = 95/116 (81%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||||||||||||||||||||||||||||||| || |||| ||||| ||| ||||| |
Sbjct: 121 attactatttttattgttattagatgataaaacatgaatagtactttatgtatgact--a 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggaca 163
||||| ||| ||||| ||||||||||||||| | ||| ||||||| ||||
Sbjct: 63 tttttttattttttttataaattttttaaataagacgaatggtcaaacgttagaca 8
>RF01062;MIR812;AACV01003306.1/7023-7178 39947:Oryza sativa Japonica
Group
Length = 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||||||||||||||| |||| || || ||| |||||||| |||||
Sbjct: 108 tatttttattgttattagatgataaaatatgaataatattttatgtgtgacttatttttt 49
>RF01062;MIR812;AAAA02026695.1/17421-17591 39946:Oryza sativa Indica
Group
Length = 171
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgac 103
|||| ||||||||||||||| ||||||||||||||||||| ||||| |||| ||||
Sbjct: 122 attagtatttttattgttatgagatgataaaatataaataatactttatgcatgac 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2 ttttagtgcccaactttgaccgtccgtcttatttgaaaa 40
|||| |||||||||||||| |||||||||||||| ||||
Sbjct: 2 ttttcgtgcccaactttgatcgtccgtcttatttaaaaa 40
>RF01062;MIR812;AJ307662.1/64503-64674 4530:Oryza sativa (rice)
Length = 172
Score = 71.9 bits (36), Expect = 3e-12
Identities = 95/117 (81%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||| ||||||||||||||| | |||| ||||| ||| |||||| ||
Sbjct: 123 attaatatttttattgctattagatgataaaacttgaatagtactttatgtgtgactaaa 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacac 164
| ||| ||||| ||| |||||||||||| |||||||| ||| |||||||||
Sbjct: 63 tatttttaaacttttcacaaattttttaaataagtcggacggtcaaatgttggacac 7
>RF01062;MIR812;AP008210.1/27744661-27744832 39947:Oryza sativa
Japonica Group
Length = 172
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaa 169
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 41 ttttcaaataagacggacggttaaacgttggacacggaaa 2
>RF01062;MIR812;AL662947.3/79766-79935 39947:Oryza sativa Japonica
Group
Length = 170
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 124 ataaaatttttaaataagacggacggttaaacgttggaca 163
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 47 ataaaatttttaaataaaacggacggttaaacgttggaca 8
>RF01062;MIR812;AP004213.3/82406-82239 39947:Oryza sativa Japonica
Group
Length = 168
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgac 103
|||| ||||||||||||||||||||||||||| |||||| |||||| ||| |||||
Sbjct: 119 attagtatttttattgttattagatgataaaacataaattttactttatgtgtgac 64
>RF01062;MIR812;AACV01018481.1/5092-5262 39947:Oryza sativa Japonica
Group
Length = 171
Score = 71.9 bits (36), Expect = 3e-12
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 56 ttttattgttattagatgataaaatataaatattacttcatgcgtgacttaatttttnnn 115
|||| |||| ||||||||||||||||| |||| ||||| ||| || |||| |||||
Sbjct: 113 ttttgttgtcattagatgataaaatatgaataatactttatgtgttactt--tttttttg 56
Query: 116 nnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct: 55 tttttttcataattttttcaaataagacggacggtcaaacgttggacacgga 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttgaccgtccgtcttatttgaaaa 40
|||||||||||||||||||||||||
Sbjct: 17 tttgaccgtccgtcttatttgaaaa 41
>RF01062;MIR812;AP008216.1/21152191-21152361 39947:Oryza sativa
Japonica Group
Length = 171
Score = 71.9 bits (36), Expect = 3e-12
Identities = 98/121 (80%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||| ||||||||||||| || | || || || |||||||||||
Sbjct: 123 attaatatttttattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 64
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|||| ||| | || |||||||||||||||||||||||||||||| |||||||
Sbjct: 63 ctttttaatttttttaacaatttttttaaataagacggacggttaaacgttgaacacgga 4
Query: 168 a 168
|
Sbjct: 3 a 3
>RF01062;MIR812;AP005163.3/84135-84299 39947:Oryza sativa Japonica
Group
Length = 165
Score = 71.9 bits (36), Expect = 3e-12
Identities = 98/118 (83%), Gaps = 8/118 (6%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| ||||||||||||||||||||||||||| || |||||||||| ||| |||| |||
Sbjct: 115 attagtatttttattgttattagatgataaaacatgaatattactttatgtctgac-taa 57
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacg 165
||||| ||||||| | |||| |||||||||||||| | |||||||| |||||
Sbjct: 56 ttttt-------tttcatatatttttcaaataagacggacgatcaaacgttgaacacg 6
>RF01062;MIR812;AP008208.1/7376859-7376690 39947:Oryza sativa
Japonica Group
Length = 170
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 120 tttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
||||||||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 51 tttcataaaatttttaaataagatggacgattaaacgttgtacacgga 4
>RF01062;MIR812;ABRL01001199.1/16150-16320 65489:Oryza barthii
Length = 171
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 130 tttttaaataagacggacggttaaacgttggacacggaaa 169
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 41 tttttaaataagacggacggttaaacattggacacggaaa 2
>RF01062;MIR812;AP005447.3/113856-113685 39947:Oryza sativa Japonica
Group
Length = 172
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||||||||||| ||||||||||||||| |||| ||||| |||||||| ||||
Sbjct: 123 attagtatttttattgttactagatgataaaatatgaatagtactttatgcgtgaattaa 64
>RF01062;MIR812;AAAA02007919.1/32-200 39946:Oryza sativa Indica
Group
Length = 169
Score = 71.9 bits (36), Expect = 3e-12
Identities = 100/122 (81%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaa 107
|||| |||||| |||||||||||||||||||| || | || ||||| ||||||||||||
Sbjct: 119 attaatattttcattgttattagatgataaaacatgattaatactttatgcgtgacttat 60
Query: 108 tttttnnnnnnntttcataaaatttttaaataagacggacggttaaacgttggacacgga 167
|| | |||||||| |||| ||||||||||||| ||||||||||||||| |||
Sbjct: 59 cttat----tattttcataattttttcaaataagacggacagttaaacgttggacatgga 4
Query: 168 aa 169
||
Sbjct: 3 aa 2
>RF01062;MIR812;AAAA02005985.1/9644-9819 39946:Oryza sativa Indica
Group
Length = 176
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
||||||||||||||||||||||||||| ||||||| ||||| || |||||||| |||||
Sbjct: 120 tatttttattgttattagatgataaaaaataaatagtactttatatgtgacttatttttt 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 126 aaaatttttaaataagacggacggttaaacgtt 158
|||| |||||||||||||| |||||||||||||
Sbjct: 132 aaaaattttaaataagacgaacggttaaacgtt 164
>RF01062;MIR812;AACV01019747.1/24938-24769 39947:Oryza sativa
Japonica Group
Length = 170
Score = 71.9 bits (36), Expect = 3e-12
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 1 gttttagtgcccaactttgaccgtccgtcttatttgaaa--annnnnnnattactatttt 58
||||| ||| |||| |||||||||||||||||||| ||| | |||| ||||||
Sbjct: 170 gttttcgtgtccaattttgaccgtccgtcttatttaaaattattttatgattagtatttt 111
Query: 59 tattgttattagatgataaaatataaatattacttcatgcgtgactta 106
|||||||||||||| |||||| || |||| ||||| ||||||||||||
Sbjct: 110 tattgttattagattataaaacatgaatagtactttatgcgtgactta 63
>RF01062;MIR812;AACV01012278.1/284-128 39947:Oryza sativa Japonica
Group
Length = 157
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 53 tatttttattgttattagatgataaaatataaatattacttcatgcgtgacttaattttt 112
|||||||||||||||||| ||| |||| ||||||| ||||| |||||||||||| |||||
Sbjct: 104 tatttttattgttattagttgacaaaacataaataatactttatgcgtgacttatttttt 45
>RF01062;MIR812;AP005727.3/27613-27779 39947:Oryza sativa Japonica
Group
Length = 167
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 48 attactatttttattgttattagatgataaaatataaata 87
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 118 attagtatttttattgttattagatgataaaatataaata 79
