miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AACV01006061.1/32591-32751 39947:Oryza sativa
Japonica Group
Length = 161
Score = 188 bits (95), Expect = 2e-47
Identities = 139/161 (86%)
Strand = Plus / Plus
Query: 43 ttttacgcgctcaactttaatcgtccgtcttatttnnnnnnnnnnnnnnncataagtcat 102
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttttacgcgctcaactttaatcgtccgtcttatttaaaaaaaattaaaaacataagtcat 60
Query: 103 gagtaaagtatactattcatattttattatctcataacaataaaaatactaattatnnnn 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtaaagtatactattcatattttattatctcataacaataaaaatactaattataaaa 120
Query: 163 nnntttaaataagacggatgattaaagttggacatggaaac 203
||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatttaaataagacggatgattaaagttggacatggaaac 161
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttg 192
||||||||||||||| |||||||||||
Sbjct: 38 tttaaataagacggacgattaaagttg 12
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 115 bits (58), Expect = 3e-25
Identities = 121/142 (85%), Gaps = 3/142 (2%)
Strand = Plus / Minus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| ||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 145 cataagtcacgagtaaa--atactattcatgttttatcatctcataacaacaaaaatact 88
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggacatggaaactcatagtt 211
|||||| ||| |||||||||||| ||| ||| ||||||| ||||||||| ||||
Sbjct: 87 aattataaaaagttttcaaataagacggacgatcaaaattggacacggaaactcacagtt 28
Query: 212 gtacttaaaatgggacgaaggg 233
| ||||||||||||||| ||||
Sbjct: 27 gcacttaaaatgggacggaggg 6
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 22 ccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
|||||||||||||||| ||| ||| ||||| ||||||| ||||||||||||||||
Sbjct: 227 ccattttaagtgcagctatgatttctcgcgcccaactttgatcgtccgtcttattt 172
>RF01062;MIR812;AP008209.1/9550679-9550510 39947:Oryza sativa
Japonica Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 80 tactattcatattttattatctcataacaataaaaatactaattattaaaaaatttaaat 139
Query: 173 aagacggatgattaaagttggaca 196
|||||||| ||| |||||||||||
Sbjct: 140 aagacggacgatcaaagttggaca 163
>RF01062;MIR812;AACV01024672.1/16013-16181 39947:Oryza sativa
Japonica Group
Length = 169
Score = 107 bits (54), Expect = 7e-23
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| |||||||||||||||||||||||||||| || ||||
Sbjct: 79 tactattcatattttatcatctcataacaataaaaatactaattataaaaaatttcaaat 138
Query: 173 aagacggatgattaaagttggacatggaaac 203
||||||||||||||||||||| || ||||||
Sbjct: 139 aagacggatgattaaagttgggcacggaaac 169
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 105 bits (53), Expect = 3e-22
Identities = 121/145 (83%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| | |||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 144 cataagtcacgcgtaaagta--ctattcatgttttatcatctcataacaataaaaatact 87
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttggacatggaaactcatagttg 212
|||||| | ||||||||| || ||| || |||||||| |||||||||| ||||
Sbjct: 86 aattataaacaaaatcaaataagacagacgatcaaggttggacacggaaactcatggttg 27
Query: 213 tacttaaaatgggacgaagggagta 237
||||||||||||||| | ||||||
Sbjct: 26 cacttaaaatgggacggatggagta 2
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 tccctctgttccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtc 71
|||||| || ||| |||||||||||||||| |||| || || ||||||| ||||||||||
Sbjct: 236 tccctccgtcccaatttaagtgcagccatgattttccgtgcccaactttgatcgtccgtc 177
Query: 72 ttattt 77
||||||
Sbjct: 176 ttattt 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 169 aaataagacggatgattaaagttggacatggaaactcatagttgtacttaaaatgggacg 228
|||||||||||| ||| |||||||| || ||||| |||| | || ||||||| |||||||
Sbjct: 171 aaataagacggacgatcaaagttgggcacggaaaatcatggctgcacttaaattgggacg 230
Query: 229 aagggagtat 238
|||||||||
Sbjct: 231 gagggagtat 240
>RF01062;MIR812;AAAA02026200.1/6578-6749 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ataagtcacgagtaaagtat--tattcatattttattatctcataacaataaaaatacta 120
Query: 154 attat 158
|||||
Sbjct: 121 attat 125
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 97.6 bits (49), Expect = 7e-20
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaa 171
|||||||||| |||||| |||||||||||| ||||||||||||||| || |||
Sbjct: 127 tactattcatgttttatcatctcataacaagaaaaatactaattataaaaaaagttcaaa 68
Query: 172 taagacggatgattaaagttggacatggaaactcatagttgtacttaaaatgggacgaag 231
||||||||||||| |||||||| || | ||||| ||||||| ||||||||||||| | ||
Sbjct: 67 taagacggatgatcaaagttgggcacgaaaacttatagttgcacttaaaatgggatggag 8
Query: 232 ggagta 237
||||||
Sbjct: 7 ggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 tccctctgttccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtc 71
|||||| || |||||||||||| ||||||| |||| || || ||||||||||||||||||
Sbjct: 237 tccctccgtcccattttaagtgtagccatgattttccgtgcccaactttaatcgtccgtc 178
Query: 72 ttattt 77
||||||
Sbjct: 177 ttattt 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 169 aaataagacggatgattaaagttggacatggaaactcatagttgtacttaaaatgggacg 228
|||||||||||| |||||||||||| || ||||| |||| | | |||||||||||||||
Sbjct: 172 aaataagacggacgattaaagttgggcacggaaaatcatggctacacttaaaatgggacg 231
Query: 229 aagggagtat 238
|||||||||
Sbjct: 232 gagggagtat 241
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 119/144 (82%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct: 143 ataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatacta 86
Query: 154 attatnnnnnnntttaaataagacggatgattaaagttggacatggaaactcatagttgt 213
||||| ||||||||||||| | ||||||| |||| | ||||||| || ||||
Sbjct: 85 attataaaaaaatttaaataagacgaacgattaaaattgggcgcggaaacttatggttgc 26
Query: 214 acttaaaatgggacgaagggagta 237
|||| ||||||||| ||| ||||
Sbjct: 25 acttgtaatgggacggaggtagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 28 taagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||||| |||| ||||||||| ||||||||||||||
Sbjct: 220 taagtgcagccatagttttccgcgtccaactttaaccgtccgtcttattt 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 166 tttaaataagacggatgattaaagttggac 195
||||||||||||||| | ||||||||||||
Sbjct: 168 tttaaataagacggacggttaaagttggac 197
>RF01062;MIR812;AP008208.1/29144216-29144048 39947:Oryza sativa
Japonica Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
|||||||||||||||||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 78 atactattcatattttatcatcttataacaataaaaatactaattataaaaatatttaaa 137
Query: 172 taagacggatgattaaagtt 191
||||||||||||| ||||||
Sbjct: 138 taagacggatgatcaaagtt 157
>RF01062;MIR812;AAAA02034606.1/19230-19396 39946:Oryza sativa Indica
Group
Length = 167
Score = 93.7 bits (47), Expect = 1e-18
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
||||||||||| |||||| |||| |||||||||||||||||||| || ||||||
Sbjct: 76 atactattcatgttttataatctaataacaataaaaatactaatcataaatttttttaaa 135
Query: 172 taagacggatgattaaagttggacatggaaac 203
||||||||||||| ||||||||||| ||||||
Sbjct: 136 taagacggatgataaaagttggacacggaaac 167
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 1e-18
Identities = 85/99 (85%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 63 ataagtcatgagtaaagta--ctattcatattttatcatctcataacaacaaaaatacta 120
Query: 154 attatnnnnnnntttaaataagacggatgattaaagttg 192
||||| |||||||||||||| ||| |||||||
Sbjct: 121 attataaaaaaaattaaataagacggacgatcaaagttg 159
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 ttttacgcgctcaactttaatcgtccgtcttattt 77
|||| ||||||||||||| ||||||||||||||||
Sbjct: 170 ttttccgcgctcaactttgatcgtccgtcttattt 136
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 93.7 bits (47), Expect = 1e-18
Identities = 122/147 (82%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 145 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaaaaaaaatact 88
Query: 153 aattat-nnnnnnntttaaataagacggatgattaaagttggacatggaaactcatagtt 211
|||||| || |||||||||||| ||| |||||||||| |||||||| | |||
Sbjct: 87 aattataaaaaaaattcaaataagacggacgatcaaagttggacgcggaaactcgtggtt 28
Query: 212 gtacttaaaatgggacgaagggagtat 238
||||||||||||||| ||| |||||
Sbjct: 27 acacttaaaatgggacggaggaagtat 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 24 attttaagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||
Sbjct: 225 attttaagtgcagccatggttttccgcgcccaactttgatcgtccatcttattt 172
>RF01062;MIR812;AAAA02015575.1/58033-57871 39946:Oryza sativa Indica
Group
Length = 163
Score = 91.7 bits (46), Expect = 4e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaatta 157
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atactattcatattttattatctcataacaataaaaatactaatta 119
>RF01062;MIR812;CR855110.1/60748-60589 4530:Oryza sativa (rice)
Length = 160
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||
Sbjct: 53 ataagtcatgagtaaagtat--tatttatattttattatctcgtaacaataaaaatacta 110
Query: 154 attat 158
|||||
Sbjct: 111 attat 115
>RF01062;MIR812;AAAA02003190.1/914-1079 39946:Oryza sativa Indica
Group
Length = 166
Score = 91.7 bits (46), Expect = 4e-18
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| || | ||||||| ||||||||||||||| |||||||
Sbjct: 76 tactattcatattttatcatattataacaacaaaaatactaattataaaaaattttaaat 135
Query: 173 aagacggatgattaaagttggac 195
|||||||||||||||||||||||
Sbjct: 136 aagacggatgattaaagttggac 158
>RF01062;MIR812;AACV01014922.1/7749-7919 39947:Oryza sativa Japonica
Group
Length = 171
Score = 89.7 bits (45), Expect = 2e-17
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
|||||||||||||||||||||||||||||| ||||||||||| ||| || ||||
Sbjct: 81 tactattcatattttattatctcataacaacaaaaatactaactataatttttttaaaat 140
Query: 173 aagacggatgattaaagttggacatggaaa 202
|||| |||||||||||||||| || |||||
Sbjct: 141 aagatggatgattaaagttgggcacggaaa 170
>RF01062;MIR812;AAAA02003647.1/3308-3140 39946:Oryza sativa Indica
Group
Length = 169
Score = 89.7 bits (45), Expect = 2e-17
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| ||||||||||||||||||||| |||||| |||||||
Sbjct: 79 tactattcatattttatcatctcataacaataaaaataccaattataaaaaaatttaaat 138
Query: 173 aagacggatgattaaagttgga 194
|||||||| ||| |||||||||
Sbjct: 139 aagacggacgatcaaagttgga 160
>RF01062;MIR812;AP008215.1/15720104-15720272 39947:Oryza sativa
Japonica Group
Length = 169
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat--nnnnnnntttaa 170
||||||||||||||||| |||| ||||||||||||||||||||||| || ||
Sbjct: 77 tactattcatattttatcatctaataacaataaaaatactaattataaaaaaaaattcaa 136
Query: 171 ataagacggatgattaaagttggacatggaaac 203
|||||||||||||| ||||||||||||||||||
Sbjct: 137 ataagacggatgatcaaagttggacatggaaac 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 167 ttaaataagacggatgattaaagttggaca 196
|||||||||||||| |||||||||||||||
Sbjct: 37 ttaaataagacggacgattaaagttggaca 8
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 12 caactttaatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 89.7 bits (45), Expect = 2e-17
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| ||||||| |||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 62 ataagtcacgagtaaa--atactattcatattttatcatctcataacaacaaaaatacta 119
Query: 154 attatnnnnnnnttt-aaataagacggatgattaaagttgg 193
||||| ||| |||||||||||| ||||||||||||
Sbjct: 120 attataaaaaaatttaaaataagacggacgattaaagttgg 160
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 48 cgcgctcaactttaatcgtccgtcttattt 77
||||| ||||||||||||||||||||||||
Sbjct: 165 cgcgcccaactttaatcgtccgtcttattt 136
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggac 195
||||||||||||||| | ||||||||||||
Sbjct: 38 tttaaataagacggacggttaaagttggac 9
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcatgagtaaagta--ctatttatattttatcatctcataacaacaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 gttttacgcgctcaactttaatcgtccgtcttattt 77
||||| ||||| |||||||||||||| |||||||||
Sbjct: 1 gttttccgcgcccaactttaatcgtctgtcttattt 36
>RF01062;MIR812;AC129226.2/34668-34840 39947:Oryza sativa Japonica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||
Sbjct: 62 cataagtcacgagtaaa--atactattcatattttattatctcgtaacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 51 gctcaactttaatcgtccgtcttattt 77
|||||||||| ||||||||||||||||
Sbjct: 163 gctcaactttgatcgtccgtcttattt 137
>RF01062;MIR812;AACV01002106.1/12557-12390 39947:Oryza sativa
Japonica Group
Length = 168
Score = 85.7 bits (43), Expect = 3e-16
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||| ||||||||| |||||||||||||||||||||||||||| || ||||
Sbjct: 78 tactattaatattttatcatctcataacaataaaaatactaattataaaaaatttcaaat 137
Query: 173 aagacggatgattaaagttggaca 196
|||||||| ||||||| |||||||
Sbjct: 138 aagacggacgattaaaattggaca 161
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 51 cataagtcatgagtaaa--atactattcatgttttatcatctcataacaacaaaaatact 108
Query: 153 aattat 158
||||||
Sbjct: 109 aattat 114
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 53 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatact 110
Query: 153 aattat 158
||||||
Sbjct: 111 aattat 116
>RF01062;MIR812;AP008208.1/7741344-7741185 39947:Oryza sativa
Japonica Group
Length = 160
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||
Sbjct: 51 cataagtcatgaataaagtat--tattcatattttatcatctcataacaacaaaaatact 108
Query: 153 aattat 158
||||||
Sbjct: 109 aattat 114
>RF01062;MIR812;AP008216.1/19916558-19916730 39947:Oryza sativa
Japonica Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 64 cataagtcacgagtaaa--atactatttatattttatcatctcataacaataaaaatact 121
Query: 153 aattat 158
||||||
Sbjct: 122 aattat 127
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 3e-16
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat-nnnnnnntttaaa 171
||||||||||||||||| |||| |||||||||||||||||||| || ||||||
Sbjct: 80 tactattcatattttatcatctaataacaataaaaatactaatcataaaaaaattttaaa 139
Query: 172 taagacggatgattaaagttggacatggaaac 203
||||||||| ||||||||||||||| ||||||
Sbjct: 140 taagacggacgattaaagttggacacggaaac 171
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 160 caactttaatcgtccgtcttattt 137
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 57 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatact 114
Query: 153 aattat 158
||||||
Sbjct: 115 aattat 120
>RF01062;MIR812;AP008207.1/16318973-16318801 39947:Oryza sativa
Japonica Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaa 171
||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||
Sbjct: 82 tactattcatattttatcatctcataacaataaaaatattaattattaaaaaatttcaaa 141
Query: 172 taagacggatgattaaagttggacatggaaac 203
||||||||||||| |||||| |||| ||||||
Sbjct: 142 taagacggatgatcaaagttagacacggaaac 173
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| |||||||| |||||| |||| ||||||| |||||| |||
Sbjct: 62 ataagtcacgagtaaagta--ctattcatgttttatcatcttataacaacaaaaatgcta 119
Query: 154 attatnnnnnnntttaaataagacggatgattaaagttggac 195
||||| ||||||||||||||| ||||||||||||||
Sbjct: 120 attataaaaaattttaaataagacggacgattaaagttggac 161
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 158 caactttaatcgtccgtcttattt 135
>RF01062;MIR812;AP008207.1/41768234-41768069 39947:Oryza sativa
Japonica Group
Length = 166
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaatta 157
|||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 77 atactattcatattttatcatctcataacaataaaaatactaatta 122
>RF01062;MIR812;AP006186.3/94692-94521 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctcataacaataaaaatactaattat 126
>RF01062;MIR812;AACV01020478.1/2846-3015 39947:Oryza sativa Japonica
Group
Length = 170
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctcataacaataaaaatactaattat 126
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 120/146 (82%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| || |||||| |||||||||||| |||||||||
Sbjct: 145 cataagtcacgagtaaagta--ctatttatgttttatcatctcataacaacaaaaatact 88
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggacatggaaactcatagtt 211
|||||| ||| |||||||||||| ||| ||| |||| | ||||||| || |||
Sbjct: 87 aattataaaaaaatttcaaataagacggacgatcaaaattgggtacggaaacttatggtt 28
Query: 212 gtacttaaaatgggacgaagggagta 237
| | ||||||||||||| ||||||||
Sbjct: 27 gcatttaaaatgggacggagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 22 ccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
||||||||| ||||||||| |||| ||||| || |||| | ||||||||||||||
Sbjct: 227 ccattttaaatgcagccatattttttcgcgcacatctttgaccgtccgtcttattt 172
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 79.8 bits (40), Expect = 2e-14
Identities = 87/104 (83%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||||||||||| |
Sbjct: 56 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatatt 113
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttggaca 196
|||||| || |||||| ||| | |||||||||||||||
Sbjct: 114 aattataaaaaatttcaaataaaacgaacgattaaagttggaca 157
>RF01062;MIR812;AAAA02016548.1/13971-13808 39946:Oryza sativa Indica
Group
Length = 164
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 71 atactattcatattttattatctaataacaataaaaatactaat 114
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 79.8 bits (40), Expect = 2e-14
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||||||||||| |
Sbjct: 63 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatatt 120
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttg 192
||||| ||||||||||||||| ||| |||||||
Sbjct: 121 gattataaaaaattttaaataagacggacgatcaaagttg 160
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 79.8 bits (40), Expect = 2e-14
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||||||| || |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagta--ctattcatatttcatcatctcataacaacaaaaatact 120
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttg 192
|||| | || |||||||||||||||| |||||||
Sbjct: 121 aattgtaaaaattttcaaataagacggatgataaaagttg 160
>RF01062;MIR812;AAAA02029430.1/233-68 39946:Oryza sativa Indica
Group
Length = 166
Score = 77.8 bits (39), Expect = 6e-14
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaataag 175
|||||||||||||| |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 79 tattcatattttatcatctcataacaataaaaatattaattataaatttttttaaataag 138
Query: 176 acggatgattaaagttggacatggaaac 203
||||| ||| | |||||| || ||||||
Sbjct: 139 acggacgatcacagttgggcacggaaac 166
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| |||||||||||||||||
Sbjct: 54 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaataaaaatact 111
Query: 153 aattat 158
||||||
Sbjct: 112 aattat 117
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||| |
Sbjct: 62 cataagtcacgagtaaagta--ctatttatattttatcatctcataacaataaaaatatt 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AAAA02012948.1/1550-1381 39946:Oryza sativa Indica
Group
Length = 170
Score = 77.8 bits (39), Expect = 6e-14
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||| || |||||| |||||| ||||||||||||| ||||||| |||||||
Sbjct: 80 tactatttatgttttatcatctcacaacaataaaaatattaattataaaaaaatttaaat 139
Query: 173 aagacggatgattaaagttggacatgga 200
|||||| || ||||||||||||||||||
Sbjct: 140 aagacgaataattaaagttggacatgga 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gctcaactttaatcgtccgtcttattt 77
|||||||||| ||||||||||||||||
Sbjct: 9 gctcaactttgatcgtccgtcttattt 35
>RF01062;MIR812;AP008218.1/26666947-26666770 39947:Oryza sativa
Japonica Group
Length = 178
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 69 cataagtcacaagtaaagta--ctatttatattttatcatctcataacaataaaaatact 126
Query: 153 aattat 158
||||||
Sbjct: 127 aattat 132
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 50 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaaatact 107
Query: 153 aattat 158
||||||
Sbjct: 108 aattat 113
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| |||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 65 cataagtcacgagtaaa--atactatttatattttattatctcataacaacaaaaatgct 122
Query: 153 aattat 158
||||||
Sbjct: 123 aattat 128
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 50 cgctcaactttaatcgtccgtcttattt 77
||||||||||| ||||||||||||||||
Sbjct: 167 cgctcaactttgatcgtccgtcttattt 140
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| ||||||||||||||||||| ||||||| |
Sbjct: 63 cataagtcacgagtaaagta--ctattcatgttttattatctcataacaacaaaaatatt 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AL731585.5/116334-116173 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |
Sbjct: 53 cataagtcacgagtaaagta--ctattcatattttatcatctcataacaatcaaaatatt 110
Query: 153 aattat 158
||||||
Sbjct: 111 aattat 116
>RF01062;MIR812;AAAA02030705.1/11077-10907 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 79 atactattcatattttaacatctcataacaataaaaatactaattat 125
>RF01062;MIR812;AP008207.1/11154446-11154276 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 79 atactattcatattttatcatcttataacaataaaaatactaattat 125
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| ||
Sbjct: 65 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaataaaaatgct 122
Query: 153 aattat 158
||||||
Sbjct: 123 aattat 128
>RF01062;MIR812;AAAA02008402.1/21221-21054 39946:Oryza sativa Indica
Group
Length = 168
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 77 atactattcatattttatcatctcataataataaaaatactaattat 123
>RF01062;MIR812;AAAA02006244.1/24151-24321 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaa 171
||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||
Sbjct: 80 tactattcatattttatcatctcataacaataaaaatactacttacataaaaatttcaaa 139
Query: 172 taagacggatgattaaagttggacatggaaac 203
||||||||||| |||||||||| || ||||||
Sbjct: 140 taagacggatgcttaaagttgggcacggaaac 171
>RF01062;MIR812;AACV01006536.1/45283-45121 39947:Oryza sativa
Japonica Group
Length = 163
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||||| |||||||||||||||||||| ||| || |||||||||
Sbjct: 61 cataagtcacgagtaaagtat--tattcatattttattatctcgtaataacaaaaatact 118
Query: 153 aattat 158
||||||
Sbjct: 119 aattat 124
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggac 195
||||||||||||||||| ||||||||||||
Sbjct: 38 tttaaataagacggatgtttaaagttggac 9
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||
Sbjct: 62 cataagtcacaagtaaagta--ctattcatattttatcatctcataacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||
Sbjct: 61 cataagtcacgagtaaagtat--tattcatgttttatcatctcataacaacaaaaatact 118
Query: 153 aattat 158
||||||
Sbjct: 119 aattat 124
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||||| |||||||||||||| |||||||||||| ||| |||||
Sbjct: 61 cataagtcacgagtaaagtat--tattcatattttatcatctcataacaacaaatatact 118
Query: 153 aattat 158
||||||
Sbjct: 119 aattat 124
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| |||||||||||||||||
Sbjct: 63 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaataaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| ||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 62 cataagtcacgagtaaattat--tattcatgttttatcatctcataacaataaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||| ||
Sbjct: 63 cataagtcacgagtaaagta--ctatttatattttatcatctcataacaataaaaatgct 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 52 cataagtcatgagtaaagta--ctattcatgttttatcatctcataacaacaaaaatact 109
Query: 153 aa 154
||
Sbjct: 110 aa 111
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||||||||||| ||||||||||||||| || ||||||||| |||||| ||
Sbjct: 63 cataagtcatgagtaaagta--ctattcatattttatcatttcataacaacaaaaatgct 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AC104713.3/50007-49838 39947:Oryza sativa Japonica
Group
Length = 170
Score = 77.8 bits (39), Expect = 6e-14
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
|||||||| || |||||| ||||||||| |||||||||||||||||| |||||
Sbjct: 79 atactattaatgttttatcatctcataataataaaaatactaattataaaaaaaattaaa 138
Query: 172 taagacggatgattaaagttggac 195
||||||||||||||||| ||||||
Sbjct: 139 taagacggatgattaaaattggac 162
>RF01062;MIR812;AAAA02032579.1/242-413 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||
Sbjct: 62 cataagttatgagtaaagta--ctattcatattttatcatcttataacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||| |
Sbjct: 60 cataagtcatgagtaaagta--ctattcatgttttatgatctcataacaacaaaaatatt 117
Query: 153 aattat 158
||||||
Sbjct: 118 aattat 123
>RF01062;MIR812;AP008207.1/29470276-29470442 39947:Oryza sativa
Japonica Group
Length = 167
Score = 77.8 bits (39), Expect = 6e-14
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat-nnnnnnntttaa 170
|||||||||||||||||| ||||||||| |||||||||| ||||||| |||||
Sbjct: 75 atactattcatattttatcatctcataataataaaaatattaattataaaagttttttaa 134
Query: 171 ataagacggatgattaaagttggacatggaaa 202
|||||| | ||||||||||||||||| |||||
Sbjct: 135 ataagatgaatgattaaagttggacacggaaa 166
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 77.8 bits (39), Expect = 6e-14
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| |||| |||| ||| ||||||||||| || |||||||
Sbjct: 115 tactattcatattttataatctaataataattaaaatactaatcataaaaaattttaaat 174
Query: 173 aagacggatgattaaagttggacatggaaact 204
|||||||| ||| ||||||||||| |||||||
Sbjct: 175 aagacggacgatcaaagttggacacggaaact 206
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggacatggaaactcatagttgtacttaaaatggg 225
|||||||||||| || ||||||||||||||| |||||||||||| || |||| ||||
Sbjct: 73 tttaaataagacagacgattaaagttggacacggaaactcatagctgcgcttattttggg 14
Query: 226 acgaagggagtat 238
||| |||||||||
Sbjct: 13 acggagggagtat 1
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||||||||||||| ||||||||||||||| || ||||||||| |||||| ||
Sbjct: 144 cataagtcatgagtaaagta--ctattcatattttatcatttcataacaacaaaaatgct 87
Query: 153 aattat 158
||||||
Sbjct: 86 aattat 81
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 28 taagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||||| ||||| ||||||||| ||| | ||||||||
Sbjct: 220 taagtgcagccatagtttttcgcgcccaactttaaccgttcatcttattt 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 28 taagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||||| ||||| ||||||| ||| || |||||||||
Sbjct: 21 taagtgcagccatagtttt-cgcgcccaactttgatcatctgtcttattt 69
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 77.8 bits (39), Expect = 6e-14
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| |||| |||| ||| ||||||||||| || |||||||
Sbjct: 126 tactattcatattttataatctaataataattaaaatactaatcataaaaaattttaaat 67
Query: 173 aagacggatgattaaagttggacatggaaact 204
|||||||| ||| ||||||||||| |||||||
Sbjct: 66 aagacggacgatcaaagttggacacggaaact 35
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 166 tttaaataagacggatgattaaagttggacatggaaactcatagttgtacttaaaatggg 225
|||||||||||| || ||||||||||||||| |||||||||||| || |||| ||||
Sbjct: 168 tttaaataagacagacgattaaagttggacacggaaactcatagctgcgcttattttggg 227
Query: 226 acgaagggagtat 238
||| |||||||||
Sbjct: 228 acggagggagtat 240
>RF01062;MIR812;AAAA02003837.1/6975-6810 39946:Oryza sativa Indica
Group
Length = 166
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tactatttatattttatcatctcataacaataaaaatactaattat 120
>RF01062;MIR812;AAAA02018757.1/7221-7031 39946:Oryza sativa Indica
Group
Length = 191
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 100 tactattcatattttattatctcgtaacaacaaaaatactaattat 145
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 ctcaactttaatcgtccgtcttattt 77
||||||||| ||||||||||||||||
Sbjct: 182 ctcaactttgatcgtccgtcttattt 157
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 81 tactattcatgttttatcatctcataacaataaaaatactaattat 126
>RF01062;MIR812;AAAA02021196.1/7908-8075 39946:Oryza sativa Indica
Group
Length = 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||||||||||||| |||| |||||||||||| |||||||||| | ||||
Sbjct: 78 tactattcatattttataatctaataacaataaaactactaattataaaaaaaatcaaat 137
Query: 173 aagacggatgattaaagttggacatggaaac 203
|||||||||||| ||| |||||||| |||||
Sbjct: 138 aagacggatgatcaaaattggacatagaaac 168
>RF01062;MIR812;AAAA02014866.1/8003-8166 39946:Oryza sativa Indica
Group
Length = 164
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 72 tactatttatattttatcatctcataacaataaaaatactaattat 117
>RF01062;MIR812;AP008212.1/29057626-29057461 39947:Oryza sativa
Japonica Group
Length = 166
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 75 tactattcatattttatcatctaataacaataaaaatactaattat 120
>RF01062;MIR812;AACV01018142.1/4485-4653 39947:Oryza sativa Japonica
Group
Length = 169
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 77 tactattcatattttatcatctaataacaataaaaatactaattat 122
>RF01062;MIR812;AACV01004268.1/19907-20065 39947:Oryza sativa
Japonica Group
Length = 159
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 70 tactatttatatcttattatctcataacaataaaaatactaattat 115
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 79 tactattcatgttttatcatctcataacaataaaaatactaattat 124
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 75.8 bits (38), Expect = 3e-13
Identities = 92/110 (83%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||| ||
Sbjct: 58 cataagtcaagagtaaagta--ctattcatgttttatcatctcataacaacaaaaatgct 115
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggacatggaa 201
|||||| ||| ||||||||| || |||||||||||||| |||||
Sbjct: 116 aattataaaaaaatttcaaataagacagacgattaaagttggacgtggaa 165
>RF01062;MIR812;AP005568.3/68303-68473 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatcttataacaataaaaatactaattat 126
>RF01062;MIR812;AL606626.3/62894-63049 39947:Oryza sativa Japonica
Group
Length = 156
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 65 tactattcatattttatcatctcataacaacaaaaatactaattat 110
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| ||||| || |||||| |||||||||||||||||||||||
Sbjct: 77 ataagtcacgagtaaagta--ctatttatgttttatcatctcataacaataaaaatacta 134
Query: 154 attat 158
|||||
Sbjct: 135 attat 139
>RF01062;MIR812;AP008210.1/30459208-30459038 39947:Oryza sativa
Japonica Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaatta 157
||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 79 atactattcatattttattatctcataacaacaaaagtactaatta 124
>RF01062;MIR812;AP008208.1/13044189-13044045 39947:Oryza sativa
Japonica Group
Length = 145
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 54 tactattcatattttatcatctcataacaataaaaataataattat 99
>RF01062;MIR812;CR855167.1/66190-66024 4530:Oryza sativa (rice)
Length = 167
Score = 75.8 bits (38), Expect = 3e-13
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
|||||||||| |||||| |||| ||||||||||||||||||||||| || ||||
Sbjct: 77 tactattcatgttttataatcttataacaataaaaatactaattataaaaaaattaaaat 136
Query: 173 aagacggatgattaaagttggacatggaaac 203
|||||||| ||| ||| ||||||| ||||||
Sbjct: 137 aagacggacgatcaaaattggacacggaaac 167
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 95 taagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatactaa 154
||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 56 taagtcacgagtaaagta--ctattcatattttatcatcttataacaataaaaatattaa 113
Query: 155 ttat 158
||||
Sbjct: 114 ttat 117
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 ctcaactttaatcgtccgtcttattt 77
||||||||||||||| ||||||||||
Sbjct: 154 ctcaactttaatcgttcgtcttattt 129
>RF01062;MIR812;AAAA02030633.1/590-759 39946:Oryza sativa Indica
Group
Length = 170
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||||| |||||| || ||||||||||||||| |||||||||||| |||||||||
Sbjct: 62 cataagtcataagtaaatta--ctattcatattttatcatctcataacaagaaaaatact 119
Query: 153 aatt 156
||||
Sbjct: 120 aatt 123
>RF01062;MIR812;AACV01008267.1/8880-8706 39947:Oryza sativa Japonica
Group
Length = 175
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatacta 153
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 81 tactatttatattttattatctcataacaataaaaatacta 121
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
||||||||||| |||||| |||||||||||| ||||||||||||||| || |||
Sbjct: 81 atactattcatgttttatcatctcataacaacaaaaatactaattataaaaaatttcaaa 140
Query: 172 taagacggatgattaaagttgg 193
||||||||| ||| ||||||||
Sbjct: 141 taagacggacgatcaaagttgg 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gctcaactttaatcgtccgtcttattt 77
|||||||||| ||||||||||||||||
Sbjct: 10 gctcaactttgatcgtccgtcttattt 36
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 73.8 bits (37), Expect = 1e-12
Identities = 88/105 (83%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||||| ||||||| |||||| |||||||| ||| |||||||||
Sbjct: 61 cataagtcacgagtaaagtat--tattcatgttttatcatctcatagcaacaaaaatact 118
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggaca 196
|||||| ||| |||||||||||||||| ||||||||||
Sbjct: 119 aattataaaaaattttcaaataagacggatgatctaagttggaca 163
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| |||||||| |||||| |||||||||||| ||||||||||
Sbjct: 52 ataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaaatacta 109
Query: 154 att 156
|||
Sbjct: 110 att 112
>RF01062;MIR812;AAAA02025447.1/9349-9518 39946:Oryza sativa Indica
Group
Length = 170
Score = 71.9 bits (36), Expect = 4e-12
Identities = 75/89 (84%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaataa 174
||||||| |||||| |||| ||||||| |||||||||||| || ||| ||||||
Sbjct: 82 tattcatgttttataatctaataacaacaaaaatactaatcatacaaaaatttcaaataa 141
Query: 175 gacggatgattaaagttggacatggaaac 203
|||||||||||||||||||||| ||||||
Sbjct: 142 gacggatgattaaagttggacacggaaac 170
>RF01062;MIR812;AP008211.1/21911813-21911642 39947:Oryza sativa
Japonica Group
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 93/112 (83%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| ||| |||| || |||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaaatat--tatttatgttttatcatctcataacaacaaaaatact 120
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggacatggaaac 203
|||||| ||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 121 aattataaaataatttcaaataagatggatgatcaaagttggacacggaaac 172
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| |||||||| |||||| || ||||||||||||||||||||
Sbjct: 53 ataagtcacgagtaaagta--ctattcatgttttatcatatcataacaataaaaatacta 110
Query: 154 att 156
|||
Sbjct: 111 att 113
>RF01062;MIR812;AACV01022766.1/13309-13482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 71.9 bits (36), Expect = 4e-12
Identities = 75/89 (84%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaataa 174
|||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 86 tattcatattttatcatctcataacaacaaaaatactaattataaaaaaatttcaaataa 145
Query: 175 gacggatgattaaagttggacatggaaac 203
|||||| ||| |||||||| || ||||||
Sbjct: 146 gacggacgatcaaagttgggcacggaaac 174
>RF01062;MIR812;AP008208.1/14869928-14869757 39947:Oryza sativa
Japonica Group
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 79 atactattcatattttatcatctaataacaataaaaatactaat 122
>RF01062;MIR812;AACV01005658.1/63646-63477 39947:Oryza sativa
Japonica Group
Length = 170
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 78 atactattcatattttataatctaataacaataaaaatactaat 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 aactttaatcgtccgtcttattt 77
|||||||||||||||||||||||
Sbjct: 13 aactttaatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02032459.1/5529-5364 39946:Oryza sativa Indica
Group
Length = 166
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaatt 156
||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 76 tactattcatattttatcatcttataacaataaaaatactaatt 119
>RF01062;MIR812;AY459341.1/30647-30476 39947:Oryza sativa Japonica
Group
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 84 tattcatattttattatctaataacaataaaaatactaat 123
>RF01062;MIR812;AP008213.1/3996320-3996492 39947:Oryza sativa
Japonica Group
Length = 173
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 80 atactattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 71.9 bits (36), Expect = 4e-12
Identities = 93/112 (83%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||||||||||||||| ||||||| |||||| |||| |||| || |||||| ||
Sbjct: 61 cataagtcatgagtaaagtat--tattcatgttttatcatcttataaaaacaaaaatgct 118
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggacatggaaac 203
|||||| ||| |||||||||||||||| |||||| ||| |||||||
Sbjct: 119 aattataaaaaaatttcaaataagacggatgatcaaagttagacgtggaaac 170
>RF01062;MIR812;AL732646.5/74405-74574 4530:Oryza sativa (rice)
Length = 170
Score = 71.9 bits (36), Expect = 4e-12
Identities = 87/104 (83%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||
Sbjct: 63 cataagtcatgcataaagtat--tattcatgttttatcatctcataacaat-aaaatact 119
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttggaca 196
|||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 120 aattataaaaaattttaaataatacggacgattaaaattggaca 163
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 71.9 bits (36), Expect = 4e-12
Identities = 84/100 (84%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| || ||||||| ||||| || ||||||||||||||||||| |||||||||
Sbjct: 50 cataagtcacgaataaagta--ctatttatgttttattatctcataacaacaaaaatact 107
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagtt 191
|||||| ||| |||||||||||||||| ||||||
Sbjct: 108 aattataaaattttttcaaataagacggatgatcaaagtt 147
>RF01062;MIR812;AL731763.1/85403-85574 4530:Oryza sativa (rice)
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 82 atactattcatattttatcatctaataacaataaaaatactaat 125
>RF01062;MIR812;AP004052.3/110986-110823 39947:Oryza sativa Japonica
Group
Length = 164
Score = 71.9 bits (36), Expect = 4e-12
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaataag 175
||||||| |||||| |||| |||||||||||||||||||| || || |||||||
Sbjct: 77 tattcatgttttatcatctaataacaataaaaatactaatcataaaaaaattgaaataag 136
Query: 176 acggatgattaaagttggaca 196
|||||| ||||||||||||||
Sbjct: 137 acggataattaaagttggaca 157
>RF01062;MIR812;AAAA02026120.1/249-420 39946:Oryza sativa Indica
Group
Length = 172
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 96 aagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatactaat 155
|||||| |||||||||| ||||||||||||||| ||||||||||||||||||| ||| |
Sbjct: 66 aagtcacgagtaaagta--ctattcatattttatcatctcataacaataaaaatgctagt 123
Query: 156 tat 158
|||
Sbjct: 124 tat 126
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 96 aagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatactaat 155
|||||| ||||||||||| ||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 64 aagtcacgagtaaagtat--tattcatgttttatcatctcataacaacaaaaatactaat 121
Query: 156 tat 158
|||
Sbjct: 122 tat 124
>RF01062;MIR812;AP008217.1/4338916-4338753 39947:Oryza sativa
Japonica Group
Length = 164
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 70 atactattcatattttatcatctaataacaataaaaatactaat 113
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| ||||||||||| |||||| ||||| |||||| |||||||||
Sbjct: 63 cataagtcacgagtaaa--atactattcatgttttatcatctcgtaacaagaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 51 gctcaactttaatcgtccgtcttattt 77
|||||||||| ||||||||||||||||
Sbjct: 164 gctcaactttgatcgtccgtcttattt 138
>RF01062;MIR812;AAAA02017831.1/48225-48390 39946:Oryza sativa Indica
Group
Length = 166
Score = 69.9 bits (35), Expect = 2e-11
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaataag 175
||||||| |||||| |||||||||||| | ||||||||||||| || |||||||
Sbjct: 79 tattcatgttttatcatctcataacaacacaaatactaattataaaaaatttcaaataag 138
Query: 176 acggatgattaaagttggacatggaaac 203
||||| ||| ||||||||||||| ||||
Sbjct: 139 acggacgatcaaagttggacatgtaaac 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 43 ttttacgcgctcaactttaatcgtccgtcttattt 77
|||||||||| ||||||||||||| |||||||||
Sbjct: 1 ttttacgcgcctaactttaatcgtctgtcttattt 35
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 97 agtcatgagtaaagtatactattcatattttattatctcataacaataaaaatactaatt 156
||||| |||||||||| |||||| ||||||||||||| ||||||| |||||||||||||
Sbjct: 67 agtcacgagtaaagta--ctattcgtattttattatcttataacaacaaaaatactaatt 124
Query: 157 at 158
||
Sbjct: 125 at 126
>RF01062;MIR812;AAAA02007619.1/8763-8592 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 115 ctattcatattttattatctcataacaataaaaatactaatta 157
||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 82 ctattcatattttatcatctcataacaacaaaaatactaatta 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 51 gctcaactttaatcgtccgtcttattt 77
||||||||||| |||||||||||||||
Sbjct: 164 gctcaactttagtcgtccgtcttattt 138
>RF01062;MIR812;CR855138.1/21145-20979 4530:Oryza sativa (rice)
Length = 167
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 85 tattcatattttatcatctaataacaataaaaatactaattat 127
>RF01062;MIR812;AACV01007972.1/14479-14312 39947:Oryza sativa
Japonica Group
Length = 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 80 tattcatgttttattatctcatgacaataaaaatactaattat 122
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| ||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaacaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AAAA02013232.1/6308-6477 39946:Oryza sativa Indica
Group
Length = 170
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| |||||||| || |||||| |||||||||||| |||||||||
Sbjct: 61 cataagtcacgagtaaa--atactatttatgttttatcatctcataacaacaaaaatact 118
Query: 153 aattat 158
||||||
Sbjct: 119 aattat 124
>RF01062;MIR812;AACV01012070.1/2375-2546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat-nnnnnnntttaaa 171
||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||
Sbjct: 81 tactattcatattttatcatctaataacaataaaaatagtaattataaaaatgttttaaa 140
Query: 172 taagacggatgattaaagttggacatggaaac 203
||||||||||| | |||||| ||||| |||||
Sbjct: 141 taagacggatggtcaaagttagacattgaaac 172
>RF01062;MIR812;AAAA02026695.1/17421-17591 39946:Oryza sativa Indica
Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 83 tatttatattttatcatctcataacaataaaaatactaattat 125
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||| |
Sbjct: 64 cataagtcacgagtaaagtaa--tattcatgttttatcatctcataacaataaaaatatt 121
Query: 153 aattat 158
||||||
Sbjct: 122 aattat 127
>RF01062;MIR812;AAAA02000445.1/1548-1714 39946:Oryza sativa Indica
Group
Length = 167
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 79 tattcatattttatcatctaataacaataaaaatactaattat 121
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||| | |||||||||| |||||||| |||||| |||||||||||||||||||||
Sbjct: 63 cataagttacgagtaaagta--ctattcatgttttatcatctcataacaataaaaataca 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| | ||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 45 cataagtcacgagtaaa--aaactgttcatgttttatcatctcataacaataaaaatact 102
Query: 153 aattat 158
||||||
Sbjct: 103 aattat 108
>RF01062;MIR812;AP008218.1/27388940-27388769 39947:Oryza sativa
Japonica Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 83 tattcatattttatcatctaataacaataaaaatactaattat 125
>RF01062;MIR812;AP005563.3/34213-34382 39947:Oryza sativa Japonica
Group
Length = 170
Score = 69.9 bits (35), Expect = 2e-11
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaat 172
||||||| ||||||||| ||| |||||||||| ||||||||||||| |||||||
Sbjct: 80 tactatttatattttatcatcccataacaatacaaatactaattataaaaaattttaaat 139
Query: 173 aagacggatgattaaagttggaca 196
||||| || ||||||||||||||
Sbjct: 140 aagacaaataattaaagttggaca 163
>RF01062;MIR812;AAAA02004256.1/11499-11667 39946:Oryza sativa Indica
Group
Length = 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
|||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 78 tactattcatgttttatcatctcataacaataaaaatactaat 120
>RF01062;MIR812;AC092388.5/132070-131900 39947:Oryza sativa Japonica
Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 80 tactattcatattttattatctaataacaacaaaaatactaat 122
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| ||||||||||||||| |
Sbjct: 60 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaataaaaatatt 117
Query: 153 aattat 158
||||||
Sbjct: 118 aattat 123
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| | |||||| |||||| |||||||||||| |||||||||
Sbjct: 51 cataagtcacgagtaaagta--ccattcatgttttatcatctcataacaacaaaaatact 108
Query: 153 aattat 158
||||||
Sbjct: 109 aattat 114
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||| |||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 60 cataagtcacgagcaaagta--ctattcacgttttatcatctcataacaataaaaatact 117
Query: 153 aattat 158
||||||
Sbjct: 118 aattat 123
>RF01062;MIR812;BX000498.1/119476-119302 4530:Oryza sativa (rice)
Length = 175
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 85 tattcatgttttataatctcataacaataaaaatactaattat 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggaca 196
|||||||||||| |||||| |||||||||||
Sbjct: 38 tttaaataagacagatgatcaaagttggaca 8
>RF01062;MIR812;AACV01013166.1/3571-3410 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 70 tactattcatattttatcatctaataacaataaaaatactaat 112
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| || |||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagta--ctatttatgttttatcatctcataacaacaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||| | |||||||||| |||||||| |||||| |||||||||||||| |||||||
Sbjct: 63 cataagttacgagtaaagta--ctattcatgttttatcatctcataacaatataaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AP008215.1/15555127-15554959 39947:Oryza sativa
Japonica Group
Length = 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 80 tactattcatattttatcatctaataacaataaaaatactaat 122
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 167 ttaaataagacggatgattaaagttg 192
||||||||||||||||||||||||||
Sbjct: 37 ttaaataagacggatgattaaagttg 12
>RF01062;MIR812;AP006186.3/121305-121135 39947:Oryza sativa Japonica
Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||| |||||| ||||||||||| ||||||||| || |||||||||
Sbjct: 62 cataagtcacgagtaaa--atactaatcatattttatcatctcataataacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 gttttacgcgctcaactttaatcgtccgtcttattt 77
||||| ||||| ||||||||| ||||||||||||||
Sbjct: 1 gttttccgcgcccaactttaaccgtccgtcttattt 36
>RF01062;MIR812;AACV01024311.1/12955-12785 39947:Oryza sativa
Japonica Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 82 tattcatattttatcatctaataacaataaaaatactaattat 124
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||| ||
Sbjct: 62 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaaatgct 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;CR855135.1/8286-8453 4530:Oryza sativa (rice)
Length = 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||| ||| |||||||||| ||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 59 cataaatcacgagtaaagta--ctattcatactttatcatcccataacaataaaaatact 116
Query: 153 aattat 158
||||||
Sbjct: 117 aattat 122
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||
Sbjct: 62 cataagtcgcgagtaaagtat--tattcatgttttatcatctcataacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP008208.1/2764819-2764990 39947:Oryza sativa
Japonica Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||| ||| |||||| |||||||||||||||||||| |
Sbjct: 63 cataagtcacgagtaaagta--ctatccatgttttatcatctcataacaataaaaatatt 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| ||||||| |||||||||
Sbjct: 64 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaacaaaaatact 121
Query: 153 aattat 158
||||||
Sbjct: 122 aattat 127
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| |||| ||||
Sbjct: 62 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaagtact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||| | |||||||| |||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagca--ctattcatgttttatcatctcataacaacaaaaatact 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AP004764.2/33491-33662 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||| ||||| ||||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 62 cataagccatgaataaagta--ctattcatgttttatcatctcataacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP003808.3/36375-36546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
|||||||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 80 atactatttatattttatcatctcataacaacaaaaatactaattat 126
>RF01062;MIR812;AC104179.1/164156-164322 4530:Oryza sativa (rice)
Length = 167
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||| ||| |||||||||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 62 cataaatcacgagtaaagta--ctattcatattttatcatgtcataacaataaaaatatt 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| || |||||| ||||||||| ||||||||||||
Sbjct: 52 cataagtcacgagtaaagta--ctatttatgttttatcatctcataataataaaaatact 109
Query: 153 aattat 158
||||||
Sbjct: 110 aattat 115
>RF01062;MIR812;AL731740.4/52227-52056 4530:Oryza sativa (rice)
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 81 tactattcatattttattatctaataacaataaaaatattaat 123
>RF01062;MIR812;AP008216.1/1661314-1661486 39947:Oryza sativa
Japonica Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;AP004692.2/81818-81656 39947:Oryza sativa Japonica
Group
Length = 163
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
|||||| |||||||||||||| |||||| |||||| |||||||||||| |||||||||
Sbjct: 64 cataagccatgagtaaagtatg--attcatgttttatcatctcataacaacaaaaatact 121
Query: 153 aattat 158
||||||
Sbjct: 122 aattat 127
>RF01062;MIR812;AAAA02008846.1/795-964 39946:Oryza sativa Indica
Group
Length = 170
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||||||| |||| ||||||| |||||||||||||||
Sbjct: 78 atactattcatattttatcatctaataacaacaaaaatactaattat 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 168 taaataagacggatgattaaagttggacatggaaa 202
||||||||||||| |||||| |||||||| |||||
Sbjct: 36 taaataagacggacgattaatgttggacacggaaa 2
>RF01062;MIR812;AL662987.3/136857-136685 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;AC107315.1/134199-134032 4530:Oryza sativa (rice)
Length = 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 78 atactattcatgttttataatctaataacaataaaaatactaattat 124
>RF01062;MIR812;AC137507.3/45931-46099 39947:Oryza sativa Japonica
Group
Length = 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 85/103 (82%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||||||||||| ||| |||| || |||||| |||| ||||||| |||||| |
Sbjct: 61 cataagtcatgagtaaaatat--tatttatgttttatcatcttataacaacaaaaatgtt 118
Query: 153 aattatnnnnnnntttaaataagacggatgattaaagttggac 195
|||||| || |||||||||||||||||||||||||||
Sbjct: 119 aattataaaaaaattcaaataagacggatgattaaagttggac 161
>RF01062;MIR812;AP008210.1/30487394-30487225 39947:Oryza sativa
Japonica Group
Length = 170
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 84 tattcatattttatcatctaataacaataaaaatactaattat 126
>RF01062;MIR812;ABRL01000581.1/12876-13040 65489:Oryza barthii
Length = 165
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 77 atactattcatattttaacatcttataacaataaaaatactaattat 123
>RF01062;MIR812;AACV01007793.1/1274-1102 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
|||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 83 tattcatattttatcatctcagaacaataaaaatactaattat 125
>RF01062;MIR812;AP004572.5/118194-118022 39947:Oryza sativa Japonica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;AP008208.1/15408252-15408424 39947:Oryza sativa
Japonica Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| | |||||||
Sbjct: 64 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacacaaatact 121
Query: 153 aattat 158
||||||
Sbjct: 122 aattat 127
>RF01062;MIR812;AP008212.1/4420719-4420549 39947:Oryza sativa
Japonica Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaattat 158
||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 84 tattcatgttttattatctcataacaacaaaaatactaattat 126
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||| |||||||||||| |||||||| |||||| |||||||||||| ||||||||
Sbjct: 62 cataagttatgagtaaagta--ctattcatgttttatcatctcataacaacgaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AC133778.4/73481-73322 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 70 tactattcatattttatcatctaataacaataaaaatactaat 112
>RF01062;MIR812;ABRL01001385.1/28807-28635 65489:Oryza barthii
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||||| |||||||||||||| |||| |||||||||||| | ||
Sbjct: 63 cataagtcacgagtaaagtat--tattcatattttatcatcttataacaataaaactgct 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AL844878.4/87591-87762 4530:Oryza sativa (rice)
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |
Sbjct: 63 cataagtcatgagtaaagtc--ctattcatattttatcatcttataacaataaaaatggt 120
Query: 153 aattat 158
||||||
Sbjct: 121 aattat 126
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||| || |||||| |||||||||||| |||||||||
Sbjct: 62 cataagtcacgagtaaagta--ctatttatgttttatcatctcataacaacaaaaatact 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
>RF01062;MIR812;AC145388.2/39592-39419 39947:Oryza sativa Japonica
Group
Length = 174
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 83 tactattcatattttatcatctaataacaataaaaatactaat 125
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||||||||||| ||||||| |
Sbjct: 60 cataagtcacgagtaaagta--ctattcatgttttatcatctcataacaacaaaaataat 117
Query: 153 aattat 158
||||||
Sbjct: 118 aattat 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttg 192
||||||||||||||||| |||||||||
Sbjct: 38 tttaaataagacggatggttaaagttg 12
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||||| ||
Sbjct: 62 cataagtcacgagtaaagta--ctattcatgttttattatcttataacaacaaaaatgct 119
Query: 153 aattat 158
||||||
Sbjct: 120 aattat 125
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 48 cgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||||||||||||||||
Sbjct: 166 cgcgctcaactttgatcgtccgtcttattt 137
>RF01062;MIR812;AP005504.3/124690-124856 39947:Oryza sativa Japonica
Group
Length = 167
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 77 tactattcatattttatcatctcatagtaataaaaatactaattat 122
>RF01062;MIR812;AP008213.1/6398072-6397898 39947:Oryza sativa
Japonica Group
Length = 175
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 84 tactattcatattttatcatctaataacaataaaaatattaattat 129
>RF01062;MIR812;AP008208.1/26089548-26089385 39947:Oryza sativa
Japonica Group
Length = 164
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 77 tactattcatgttttataatctaataacaataaaaatactaattat 122
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggacatggaaac 203
||||||||||||||| |||||| ||||||| ||||||
Sbjct: 38 tttaaataagacggacgattaagtttggacacggaaac 1
>RF01062;MIR812;AP008212.1/4136542-4136710 39947:Oryza sativa
Japonica Group
Length = 169
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 80 tactattcatattttatcatctaataacaataaaaatattaattat 125
>RF01062;MIR812;AAAA02007384.1/1216-1047 39946:Oryza sativa Indica
Group
Length = 170
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||||||||||| | ||||||||| |||||| |||||||||||| ||||||| ||
Sbjct: 64 ataagtcatgagtaaa--acactattcatgttttatcatctcataacaacaaaaatatta 121
Query: 154 attat 158
|||||
Sbjct: 122 attat 126
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 69 tactattcatgttttatcatctcataacaacaaaaatactaattat 114
>RF01062;MIR812;AAAA02009124.1/24488-24331 39946:Oryza sativa Indica
Group
Length = 158
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 attcatattttattatctcataacaataaaaatactaattat 158
|||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 71 attcatgttttattatctcataacaacaaaaatactaattat 112
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct: 81 tactatacatgttttatcatctcataacaataaaaatactaattat 126
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 48 cgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||||||||||||||||
Sbjct: 167 cgcgctcaactttgatcgtccgtcttattt 138
>RF01062;MIR812;AP008217.1/3029083-3028927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 67.9 bits (34), Expect = 6e-11
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
||||||||||| |||||| |||| ||||||||| ||||||||||||| |||||
Sbjct: 67 atactattcatgttttataatctaataacaatagaaatactaattataaaaaaa-ttaaa 125
Query: 172 taagacggatgattaaagttggacatggaaa 202
||||||| | ||||||||||||||| |||||
Sbjct: 126 taagacgaacgattaaagttggacacggaaa 156
>RF01062;MIR812;AAAA02018371.1/438-593 39946:Oryza sativa Indica
Group
Length = 156
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| ||||||||| |||| |||||||||||||||||||||||
Sbjct: 70 tactatttatattttatcatctaataacaataaaaatactaattat 115
>RF01062;MIR812;AAAA02006234.1/8983-8826 39946:Oryza sativa Indica
Group
Length = 158
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| |||| |||| ||||||||||||||||||||||||||||
Sbjct: 69 tactatttatatcttatcatctcataacaataaaaatactaattat 114
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 115 ctattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaata 173
|||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 84 ctattcatgttttatcatctcataacaacaaaaatactaattataaaaaaatttcaaata 143
Query: 174 agacggatgattaaagttggaca 196
|||| |||||| |||||||||||
Sbjct: 144 agacagatgatcaaagttggaca 166
>RF01062;MIR812;AAAA02004556.1/18310-18145 39946:Oryza sativa Indica
Group
Length = 166
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 76 tactattcatattttatcatctaataacaataaaaatattaattat 121
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| || ||||||| |||||||| |||||| |||||||||||||||||||| |
Sbjct: 55 cataagtcacgaataaagta--ctattcatgttttatcatctcataacaataaaaatatt 112
Query: 153 aatta 157
|||||
Sbjct: 113 aatta 117
>RF01062;MIR812;AAAA02030816.1/30098-30254 39946:Oryza sativa Indica
Group
Length = 157
Score = 67.9 bits (34), Expect = 6e-11
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
||||||||||| |||||| |||| ||||||||| ||||||||||||| |||||
Sbjct: 67 atactattcatgttttataatctaataacaatagaaatactaattataaaaaag-ttaaa 125
Query: 172 taagacggatgattaaagttggacatggaaa 202
||||||| | ||||||||||||||| |||||
Sbjct: 126 taagacgaacgattaaagttggacacggaaa 156
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 82 tactattcatgttttatcatctcataataataaaaatactaattat 127
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttgg 193
||||||||||||||| ||||||||||||
Sbjct: 38 tttaaataagacggacgattaaagttgg 11
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 12 caactttaatcgtccgtcttattt 35
>RF01062;MIR812;AACV01009158.1/251-83 39947:Oryza sativa Japonica
Group
Length = 169
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 attcatattttattatctcataacaataaaaatactaattat 158
|||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 82 attcatgttttattatctcataacaataaaaatattaattat 123
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| ||||||||||||||| |||| |||| || ||||||||||
Sbjct: 54 ataagtcacgagtaaagta--ctattcatattttatcatcttataataacaaaaatacta 111
Query: 154 attat 158
|||||
Sbjct: 112 attat 116
>RF01062;MIR812;AP008216.1/11453914-11453749 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| ||||||| |||| ||| || ||||||||||||||||||| ||||||||||
Sbjct: 63 ataagtcacgagtaaa--atacgatttatgttttattatctcataacaacaaaaatacta 120
Query: 154 attat 158
|||||
Sbjct: 121 attat 125
>RF01062;MIR812;AAAA02006966.1/65891-66058 39946:Oryza sativa Indica
Group
Length = 168
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaatta 157
||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 83 tattcatgttttatcatctcataacaataaaaatactaatta 124
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct: 82 tactatacatgttttatcatctcataacaataaaaatactaattat 127
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 50 cgctcaactttaatcgtccgtcttattt 77
||||||||||| ||||||||||||||||
Sbjct: 166 cgctcaactttgatcgtccgtcttattt 139
>RF01062;MIR812;AP008210.1/22155975-22155804 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 114 actattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 82 actattcatattttatcatctaataacaataaaaatactaat 123
>RF01062;MIR812;AP008208.1/34975479-34975627 39947:Oryza sativa
Japonica Group
Length = 149
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 57 tactattcatattttatcatctaataacaataaaaatagtaattat 102
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 81 tactattcatgttttatcatctcatgacaataaaaatactaattat 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 166 tttaaataagacggatgattaaagttggacatggaaa 202
||||||||||| ||||||||||||||| ||||||||
Sbjct: 38 tttaaataagatggatgattaaagttgttcatggaaa 2
>RF01062;MIR812;AP008214.1/14414734-14414905 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 82 tactattcatgttttatcatctcatgacaataaaaatactaattat 127
>RF01062;MIR812;AP008215.1/22193931-22194089 39947:Oryza sativa
Japonica Group
Length = 159
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 69 tactattcatgttttatcatctcataagaataaaaatactaattat 114
>RF01062;MIR812;AP005447.3/113856-113685 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 81 tactattcatattttatcatctagtaacaataaaaatactaattat 126
>RF01062;MIR812;AP004048.3/42552-42381 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 73/87 (83%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 118 ttcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aaataaga 176
|||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||
Sbjct: 86 ttcatattttatcatctcataacaacaaaaatactaattataaaaaattttcaaataaga 145
Query: 177 cggatgattaaagttggacatggaaac 203
|||| || |||||||| ||| ||||||
Sbjct: 146 cggacgactaaagttgaacacggaaac 172
>RF01062;MIR812;AP003767.3/105678-105508 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 114 actattcatattttattatctcataacaataaaaatactaattat-nnnnnnntttaaat 172
|||||||||||||||| |||||||||||| ||||| ||||||||| |||||||
Sbjct: 81 actattcatattttatcatctcataacaacaaaaacactaattataaaagaaatttaaat 140
Query: 173 aagacggatgattaaagttggacatggaaac 203
|||||||| ||| ||| ||||||| ||||||
Sbjct: 141 aagacggacgatcaaaattggacacggaaac 171
>RF01062;MIR812;AACV01013486.1/303-473 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 80 tactattcatattttatcatctcgtaacaacaaaaatactaattat 125
>RF01062;MIR812;AAAA02000541.1/66892-67063 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 81 tacttttcatgttttatcatctcataacaataaaaatactaattat 126
>RF01062;MIR812;AACV01010311.1/53892-53721 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
||||||||||||||||| |||||| |||||||||| |||||| ||||| ||||||||||
Sbjct: 68 ataagtcatgagtaaag--tactatacatattttatcatctcacaacaacaaaaatacta 125
Query: 154 attat 158
||||
Sbjct: 126 tttat 130
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 82 tactattcatgttttatcatctcatagcaataaaaatactaattat 127
>RF01062;MIR812;AAAA02010849.1/27534-27396 39946:Oryza sativa Indica
Group
Length = 139
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||||| |||||||| ||||||| |||||| ||||| |||||||||||||||||
Sbjct: 47 ataagtcatgtataaagtat--tattcatgttttatcatctcgtaacaataaaaatacta 104
Query: 154 attat 158
|||||
Sbjct: 105 attat 109
>RF01062;MIR812;AACV01025578.1/4137-4307 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 80 tactattcatattttatcatctcataacaataaaaatgctagttat 125
>RF01062;MIR812;AP003338.3/4697-4870 39947:Oryza sativa Japonica
Group
Length = 174
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 82 tactattcatattttatcatctcgtaacaacaaaaatactaattat 127
>RF01062;MIR812;AP004002.3/83966-84131 39947:Oryza sativa Japonica
Group
Length = 166
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 77 tactattcatggtttatcatctcataacaataaaaatactaattat 122
>RF01062;MIR812;AAAA02020057.1/3907-4081 39946:Oryza sativa Indica
Group
Length = 175
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
||||||||| ||||||||| ||||| ||||||||| ||||||||| || ||||||||||
Sbjct: 67 ataagtcataagtaaagta--ctatttatattttatcatctcataataacaaaaatacta 124
Query: 154 attat 158
|||||
Sbjct: 125 attat 129
>RF01062;MIR812;AP008213.1/4940528-4940359 39947:Oryza sativa
Japonica Group
Length = 170
Score = 67.9 bits (34), Expect = 6e-11
Identities = 82/99 (82%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 106 taaagtatactattcatattttattatctcataacaataaaaatactaattat-nnnnnn 164
|||||| |||||||||| |||||| |||| |||||||||||||||| ||| ||
Sbjct: 72 taaagtgtactattcatgttttataatctaataacaataaaaatacaaatcataaaaaaa 131
Query: 165 ntttaaataagacggatgattaaagttggacatggaaac 203
|| |||||||||| ||||| ||||||||||||||||||
Sbjct: 132 attcaaataagacgaatgatcaaagttggacatggaaac 170
>RF01062;MIR812;AACV01008082.1/25543-25371 39947:Oryza sativa
Japonica Group
Length = 173
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 81 tactattcatgttttatcatctaataacaataaaaatactaattat 126
>RF01062;MIR812;AAAA02021889.1/14885-15055 39946:Oryza sativa Indica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 81 tactattcatgttttatcatctcataataataaaaatactaattat 126
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 69 tactattcatgttttatcatcttataacaataaaaatactaattat 114
>RF01062;MIR812;AAAA02024783.1/5623-5452 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 82 tactattcatgttttatcatctcatgacaataaaaatactaattat 127
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| |||||| |||| ||||||| |||||||||
Sbjct: 52 cataagtcacgagtaaagta--ctattcatgttttatcatcttataacaacaaaaatact 109
Query: 153 aatta 157
|||||
Sbjct: 110 aatta 114
>RF01062;MIR812;AAAA02032714.1/36952-37122 39946:Oryza sativa Indica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 80 tactattcataatttatcatctcataacaataaaaatattaattat 125
>RF01062;MIR812;AAAA02000319.1/8883-9048 39946:Oryza sativa Indica
Group
Length = 166
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct: 77 tactatttatattttatcatctcataacaataaaagtactaattat 122
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 ctcaactttaatcgtccgtcttattt 77
||||||||| ||||||||||||||||
Sbjct: 157 ctcaactttgatcgtccgtcttattt 132
>RF01062;MIR812;AP008216.1/13315098-13314928 39947:Oryza sativa
Japonica Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 80 tactattcatgttttatcatctcataataataaaaatactaattat 125
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 80 tactattcatgttttatcatctcataacaagaaaaatactaattat 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 12 caactttaatcgtccgtcttattt 35
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 169 aaataagacggatgattaaagttggacatggaaa 202
|||||||||||| |||||||||||| || |||||
Sbjct: 35 aaataagacggacgattaaagttgggcacggaaa 2
>RF01062;MIR812;AACV01029812.1/857-689 39947:Oryza sativa Japonica
Group
Length = 169
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaatta 157
||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 85 tattcatgttttatcatctcataacaataaaaatactaatta 126
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 67.9 bits (34), Expect = 6e-11
Identities = 81/98 (82%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| |||||||||| |||||||| |||||| |||| ||||||| |||||| |||
Sbjct: 64 ataagtcacgagtaaagta--ctattcatgttttatcatcttataacaacaaaaatgcta 121
Query: 154 attatnnnnnnntttaaataagacggatgattaaagtt 191
||||| |||||||||||||| ||||||||||
Sbjct: 122 attataaaaaattttaaataagacgggcgattaaagtt 159
>RF01062;MIR812;AP002818.2/18771-18602 39947:Oryza sativa Japonica
Group
Length = 170
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||||||||| |||| |||||||||||||||||||||||| || |||||| |||
Sbjct: 62 ataagtcatgagtacagta--ctattcatattttattatctcatagtaacaaaaatgcta 119
Query: 154 attat 158
|||||
Sbjct: 120 attat 124
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 48 cgcgctcaactttaatcgtccgtcttattt 77
|||||||||||||||| ||||||||||||
Sbjct: 165 cgcgctcaactttaataatccgtcttattt 136
>RF01062;MIR812;AP008208.1/21859946-21859775 39947:Oryza sativa
Japonica Group
Length = 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaattat 158
|||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 80 tactattcatgttttatcatctaataacaataaaaatactaattat 125
>RF01058;MIR806;AAAA02017693.1/1498-1741 39946:Oryza sativa Indica
Group
Length = 244
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 tccctctgttccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtc 71
|||||| || || ||||||||||||||||| ||| ||||| ||||||| ||||||||||
Sbjct: 240 tccctccgtccctttttaagtgcagccatgagtttccgcgcacaactttgatcgtccgtc 181
Query: 72 ttattt 77
||||||
Sbjct: 180 ttattt 175
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 tccctctgttccattttaagtgcagccatggttttacgcgctcaactttaatcgtccgtc 71
|||||| || |||||||||||| |||||||||||| | | | ||||||| |||||||||
Sbjct: 5 tccctccgtcccattttaagtgtagccatggttttccacacccaactttgatcgtccgtt 64
Query: 72 ttattt 77
||||||
Sbjct: 65 ttattt 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 94 ataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatacta 153
|||||||| ||||||| ||||| ||||| |||||| | ||||||||| ||||||||||
Sbjct: 81 ataagtcacgagtaaa--atacttttcatgttttatcacatcataacaacaaaaatacta 138
Query: 154 attat 158
|||||
Sbjct: 139 attat 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 169 aaataagacggatgattaaagttggacatggaaactcatagttgtacttaaaatgggacg 228
|||||||||||| ||| ||||||| | |||||||||| | || |||||||| ||||||
Sbjct: 175 aaataagacggacgatcaaagttgtgcgcggaaactcatggctgcacttaaaaagggacg 234
Query: 229 aagggagta 237
||||||||
Sbjct: 235 gagggagta 243
>RF01062;MIR812;AAAA02003779.1/37338-37509 39946:Oryza sativa Indica
Group
Length = 172
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaatta 157
||||||||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 81 tactattcatattttatcatctcgtaacaacaaaaatactaatta 125
>RF01062;MIR812;AP008210.1/15894712-15894873 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 122 tattttattatctcataacaataaaaatactaattat 158
|||||||| ||||||||||||||||||||||||||||
Sbjct: 81 tattttatcatctcataacaataaaaatactaattat 117
>RF01062;MIR812;AC210446.1/80612-80444 4538:Oryza glaberrima
(African rice)
Length = 169
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 114 actattcatattttattatctcataacaataaaaatactaattat 158
|||||| ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 80 actatttatattttatcatctcataataataaaaatactaattat 124
>RF01062;MIR812;AC093953.2/91582-91415 39947:Oryza sativa Japonica
Group
Length = 168
Score = 65.9 bits (33), Expect = 2e-10
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnntttaaa 171
||||||||||| |||||| |||| |||||||||||||||||||| || ||||||
Sbjct: 77 atactattcatgttttatcatctaataacaataaaaatactaatcataaaattttttaaa 136
Query: 172 taagacggatgattaaag 189
|||||| ||| |||||||
Sbjct: 137 taagacagataattaaag 154
>RF01062;MIR812;AP008207.1/42107354-42107187 39947:Oryza sativa
Japonica Group
Length = 168
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatactaatta 157
|||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 76 tactattcatgctttatcatctcataacaataaaaatactaatta 120
>RF01062;MIR812;AACV01002156.1/15981-15811 39947:Oryza sativa
Japonica Group
Length = 171
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaatt 156
||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 83 tattcatgttttatcatctcataacaataaaaatactaatt 123
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 50 cgctcaactttaatcgtccgtcttattt 77
||||||||||| ||||||||||||||||
Sbjct: 164 cgctcaactttgatcgtccgtcttattt 137
>RF01062;MIR812;AP008217.1/23601066-23600893 39947:Oryza sativa
Japonica Group
Length = 174
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaatt 156
|||||||||||||||||| |||| |||| ||||||||||||||||
Sbjct: 81 atactattcatattttatcatctaataaaaataaaaatactaatt 125
>RF01062;MIR812;AC074355.6/121402-121557 39947:Oryza sativa Japonica
Group
Length = 156
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaatt 156
|||||||||||||| |||| |||||||||||||||||||||
Sbjct: 67 tattcatattttatcatctgataacaataaaaatactaatt 107
>RF01062;MIR812;AACV01008716.1/21724-21892 39947:Oryza sativa
Japonica Group
Length = 169
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 113 tactattcatattttattatctcataacaataaaaatacta 153
|||||||||| |||||| |||||||||||||||||||||||
Sbjct: 79 tactattcatcttttatcatctcataacaataaaaatacta 119
>RF01062;MIR812;AACV01022357.1/25126-24956 39947:Oryza sativa
Japonica Group
Length = 171
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/64 (89%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| ||||||| |||||| |||||||||||| |||||||||
Sbjct: 63 cataagtcacgagtaaagtag--tattcatgttttatcatctcataacaacaaaaatact 120
Query: 153 aatt 156
||||
Sbjct: 121 aatt 124
>RF01062;MIR812;AC174464.1/41456-41632 39947:Oryza sativa Japonica
Group
Length = 177
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/56 (91%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaa 148
||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||
Sbjct: 64 cataagtcacgagtaaa--atactatttatattttatcatctcataacaataaaaa 117
>RF01062;MIR812;AC146702.1/14013-13844 39947:Oryza sativa Japonica
Group
Length = 170
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaattatnnnnnnnttt-aa 170
||||||||||| |||||| |||| |||||||||||||||||||||| ||| ||
Sbjct: 78 atactattcatgttttataatctactaacaataaaaatactaattataaaaaaatttcaa 137
Query: 171 ataagacggatgattaaagttggaca 196
|||||||||| ||| |||||||||||
Sbjct: 138 ataagacggacgatcaaagttggaca 163
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 168 taaataagacggatgattaaagttggacatggaaac 203
|||||||||||| |||||||| ||||||||||||||
Sbjct: 36 taaataagacgggtgattaaaattggacatggaaac 1
>RF01062;MIR812;AC123568.1/40119-39966 39947:Oryza sativa Japonica
Group
Length = 154
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 167 ttaaataagacggatgattaaagttggacatggaaac 203
|||||||||||||| ||||||||||||||||||||||
Sbjct: 118 ttaaataagacggacgattaaagttggacatggaaac 154
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatact 152
|||||||||||||| ||| |||||||| |||||||||
Sbjct: 82 tattcatattttatcatcccataacaacaaaaatact 118
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 143 caactttaatcgtccgtcttattt 120
>RF01062;MIR812;AACV01023354.1/8422-8589 39947:Oryza sativa Japonica
Group
Length = 168
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 114 actattcatattttattatctcataacaataaaaatactaattat 158
||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 78 actattcatgtcttattatctcataataataaaaatactaattat 122
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||| | ||
Sbjct: 62 cataagtcacgagtaaagta--ctattcatgttttattatcttataacaacaaaattgct 119
Query: 153 aattat-nnnnnnntttaaataagacggatgattaaagttg 192
|||||| ||||||||||||||||||| |||||||
Sbjct: 120 aattataaaaaaattttaaataagacggatgatcaaagttg 160
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 48 cgcgctcaactttaatcgtccgtcttattt 77
||||||||||||| ||| ||||||||||||
Sbjct: 166 cgcgctcaactttgatcatccgtcttattt 137
>RF01062;MIR812;AL442103.2/69331-69155 4530:Oryza sativa (rice)
Length = 177
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/56 (91%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaa 148
||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||
Sbjct: 64 cataagtcacgagtaaagta--ctattcatattttatcatctcataacaacaaaaa 117
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 caactttaatcgtccgtcttattt 77
||||||||||||||||||||||||
Sbjct: 165 caactttaatcgtccgtcttattt 142
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 65.9 bits (33), Expect = 2e-10
Identities = 87/105 (82%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
||||||||| ||||||||| |||||||| |||||| |||||||||||| ||||||| |
Sbjct: 63 cataagtcacgagtaaagtg--ctattcatgttttataatctcataacaacaaaaatagt 120
Query: 153 aattatnnnnnnnttt-aaataagacggatgattaaagttggaca 196
|||||| ||| |||||||| ||| |||||||||||||||
Sbjct: 121 aattataaaaaattttcaaataagatggacgattaaagttggaca 165
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 167 ttaaataagacggatgattaaagttgg 193
|||||||||||||||||||||||||||
Sbjct: 37 ttaaataagacggatgattaaagttgg 11
>RF01062;MIR812;AL662992.3/36980-36806 39947:Oryza sativa Japonica
Group
Length = 175
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 106 taaagtatactattcatattttattatctcataacaataaaaatactaattat 158
|||||||| ||||| | |||||| ||||||||||||||||||||||||||||
Sbjct: 77 taaagtattttattcgtgttttatcatctcataacaataaaaatactaattat 129
>RF01062;MIR812;AAAA02028934.1/4394-4222 39946:Oryza sativa Indica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct: 79 atactattcatattttatcatctaataacaataaacatactaat 122
>RF01062;MIR812;AAAA02004871.1/2679-2849 39946:Oryza sativa Indica
Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 80 atactatttatattttatcatctgataacaataaaaatactaat 123
>RF01062;MIR812;AAAA02031000.1/27408-27247 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct: 69 atactattcatattttatcatctaataacaataaatatactaat 112
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 96 aagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatactaat 155
|||||| |||||||||| ||||| || |||||| ||||||||||||||||||| |||||
Sbjct: 66 aagtcacgagtaaagta--ctatttatgttttatcatctcataacaataaaaatgctaat 123
Query: 156 tat 158
|||
Sbjct: 124 tat 126
>RF01062;MIR812;AAAA02020877.1/46788-46617 39946:Oryza sativa Indica
Group
Length = 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 80 atactattcatattttatcatctaataaaaataaaaatactaat 123
>RF01062;MIR812;ABRL01001405.1/19095-18926 65489:Oryza barthii
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 115 ctattcatattttattatctcataacaataaaaatactaattat 158
||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 82 ctattaatgttttatcatctcataacaataaaaatactaattat 125
>RF01062;MIR812;AP008215.1/10709473-10709641 39947:Oryza sativa
Japonica Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaat 155
||||||||||||||||||| || |||||||||||||||||
Sbjct: 83 tattcatattttattatctaatgacaataaaaatactaat 122
>RF01062;MIR812;AACV01001613.1/49598-49424 39947:Oryza sativa
Japonica Group
Length = 175
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 atactattcatattttattatctcataacaataaaaatactaat 155
|||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 81 atactattcatattttatcatctaataacaataaaaatattaat 124
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 116 tattcatattttattatctcataacaataaaaatactaat 155
||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 81 tattcatgttttattatctaataacaataaaaatactaat 120
>RF01062;MIR812;AP003928.3/22059-21890 39947:Oryza sativa Japonica
Group
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 119 tcatattttattatctcataacaataaaaatactaattat 158
|||| |||||| ||||||||||||||||||||||||||||
Sbjct: 85 tcatgttttatcatctcataacaataaaaatactaattat 124
