miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 313 bits (158), Expect = 5e-85
Identities = 188/203 (92%)
Strand = Plus / Plus
Query: 1 cttaagtgcagccatgagtttccgtgcccaactttatcgttcgtcttatttgaaannnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 cttaagtgcagccatgagtttccgtgcccaactttatcgttcgtcttatttgaaattttt 78
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ttatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 138
Query: 121 cttatgtttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcac 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 139 cttatgtttttattgtttttaaaaaaaattcaaataacacagacgatcaaagttgggcac 198
Query: 181 ggaaaatcatggctgcacttaaa 203
|||||||||||||||||||||||
Sbjct: 199 ggaaaatcatggctgcacttaaa 221
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 169 aaagttgggcacggaaaatcatggctgcacttaa 202
||||||||||||||||| ||||||||||||||||
Sbjct: 53 aaagttgggcacggaaactcatggctgcacttaa 20
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt 35
|||||||||||||||| |||||||||||||||||
Sbjct: 220 ttaagtgcagccatgattttccgtgcccaacttt 187
>RF01062;MIR812;AP005493.3/5146-5314 39947:Oryza sativa Japonica
Group
Length = 169
Score = 246 bits (124), Expect = 1e-64
Identities = 154/169 (91%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaactttatcgttcgtcttatttgaaannnnnnnatgattagtatttct 77
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 169 gtttccgtgcccaactttatcgttcgtcttatttgaaatttttttatgattagtatttct 110
Query: 78 attgttattagatgataaaacatgaatagtactttatgtgtgacttatgtttttattgtt 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 attgttattagatgataaaacatgaatagtactttatgtgtgacttatgtttttattgtt 50
Query: 138 tttnnnnnnnnttcaaataacacagacgatcaaagttgggcacggaaaa 186
||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tttaaaaaaaattcaaataacacagacgatcaaagttgggcacggaaaa 1
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 141 bits (71), Expect = 4e-33
Identities = 121/139 (87%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 84 attagtatttttattgttatgagatgataaaacatgaatagtactttacgcgtgacttat 143
Query: 126 gtttt-tattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacggaa 184
||||| ||| |||| ||||||||| || |||||||||||||||||||||||
Sbjct: 144 gttttaaatttttttcaaaaaaatttcaaataagacggacgatcaaagttgggcacggaa 203
Query: 185 aatcatggctgcacttaaa 203
|||||||||||||||||||
Sbjct: 204 aatcatggctgcacttaaa 222
Score = 77.8 bits (39), Expect = 5e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaa 55
|||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 221 ttaagtgcagccatgattttccgtgcccaactttgatcgtccgtcttatttgaaa 167
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 150 tcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcacttaaa 203
|||||||| |||||||||||| ||||| |||||||| |||||| ||||||||||
Sbjct: 72 tcaaataagacagacgatcaaggttggacacggaaactcatggttgcacttaaa 19
>RF01062;MIR812;AAAA02020594.1/5764-5601 39946:Oryza sativa Indica
Group
Length = 164
Score = 123 bits (62), Expect = 1e-27
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 146 cgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatgataaaa 87
Query: 98 catgaatagtactttatgtgtgacttatgttttta 132
||||||||||||||||||||||||| || ||||||
Sbjct: 86 catgaatagtactttatgtgtgactaattttttta 52
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||||||| ||||||||| |||| |||||||||| ||| |||||||||||||
Sbjct: 171 gtttccgtgtccaactttaatcgtccgtcttatttaaaatttttttatgattagtatttt 112
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttt 131
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 111 tattgttattagatgataaaatatgaatagtactttatgcgtgacttatgttttt 57
>RF01062;MIR812;AC107314.1/58368-58197 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 68
Query: 123 tatgttttta 132
||||||||||
Sbjct: 67 tatgttttta 58
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 121 bits (61), Expect = 4e-27
Identities = 94/106 (88%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 28 ccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttatt 86
|||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||
Sbjct: 159 ccaactttgatcgtccgtcttatttgaaatgtttttatgattagtatttttattgttatt 100
Query: 87 agatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
|||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 99 agataataaaacatgaataatactttatgtgtgacttatgttttta 54
>RF01062;MIR812;AC096856.7/14838-15012 39947:Oryza sativa Japonica
Group
Length = 175
Score = 119 bits (60), Expect = 2e-26
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 155 atcgttcgtcttatttgaaaaacaattatgattagtatttttattgttattagatgataa 96
Query: 96 aacatgaatagtactttatgtgtgacttatgttttta 132
|||||||||||||||||||||||||| || ||||||
Sbjct: 95 tacatgaatagtactttatgtgtgactaatattttta 59
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 117 bits (59), Expect = 6e-26
Identities = 166/204 (81%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnn 60
||||||| | ||| ||||||||| | |||||||| ||||| |||||||||||||
Sbjct: 20 ttaagtgtaaccacgagtttccgcgtccaactttgatcgtccgtcttatttgaatttttt 79
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
|| |||||||||| | ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 80 ttataattagtattttttttgttatgagatgataaaacatgaatagtactttactcgtga 139
Query: 121 cttatgttttt-attgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggca 179
||||||||||| | | ||||| ||||||||| | |||||||||||||||||
Sbjct: 140 cttatgtttttaaattttttttaacttttttcaaataagatggacgatcaaagttgggcg 199
Query: 180 cggaaaatcatggctgcacttaaa 203
||||||| ||||||||||||||||
Sbjct: 200 cggaaaaccatggctgcacttaaa 223
Score = 54.0 bits (27), Expect = 8e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaa 55
||||||||||||||| |||||| |||||||||| ||||| | ||||||||||||
Sbjct: 222 ttaagtgcagccatggttttccgcgcccaactttgatcgtccatcttatttgaaa 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcacttaaa 203
||||||||| || ||||||||||||||| | |||||| || ||| | ||||||||
Sbjct: 73 ttcaaataagacggacgatcaaagttggacgcggaaactcgtggttacacttaaa 19
>RF01062;MIR812;AAAA02017655.1/22485-22657 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 2e-25
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 153 atcgttcgtcttatttgaaaaaaaattatgattagtatttttattgctattagatgataa 94
Query: 96 aacatgaatagtactttatgtgtgact 122
|||||||||||||||||||||||||||
Sbjct: 93 aacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AP004646.3/3196-3367 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 66 aattttttta 57
>RF01062;MIR812;AAAA02018710.1/11365-11199 39946:Oryza sativa Indica
Group
Length = 167
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 123 atgattagtatttttattgttaatagatgataaaacatgaatagtactttatgcgtgact 64
Query: 123 tatgttttta 132
||||||||||
Sbjct: 63 tatgttttta 54
>RF01062;MIR812;AP008214.1/27600377-27600200 39947:Oryza sativa
Japonica Group
Length = 178
Score = 113 bits (57), Expect = 1e-24
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 151 cgttcgtcttatttgaaaattttttatgattactatttttattgttattagatgataaaa 92
Query: 98 catgaatagtactttatgtgtgacttatgttttt 131
||||||||||||||||||||||||| || |||||
Sbjct: 91 catgaatagtactttatgtgtgactaattttttt 58
>RF01062;MIR812;AP008215.1/15555127-15554959 39947:Oryza sativa
Japonica Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 125 atgattagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgact 66
Query: 123 tatgttttt 131
|||||||||
Sbjct: 65 tatgttttt 57
>RF01062;MIR812;AACV01006539.1/16109-15936 39947:Oryza sativa
Japonica Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 128 atgattagtatttctattgttattagatgataaaacatgaattgtactttatgcgtgact 69
Query: 123 tatgttttt 131
||| |||||
Sbjct: 68 tatattttt 60
>RF01062;MIR812;AACV01012113.1/19788-19615 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 4e-24
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 152 cgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatgataaaa 93
Query: 98 catgaatagtactttatgtgtgact 122
||||||||||||||||| |||||||
Sbjct: 92 catgaatagtactttatatgtgact 68
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 143/173 (82%), Gaps = 4/173 (2%)
Strand = Plus / Minus
Query: 17 agtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtattt 75
|||||| |||||||||||| ||||| |||||||||||||| || ||||||||||
Sbjct: 173 agtttctgtgcccaactttgatcgtccgtcttatttgaaatttttt-ataattagtattt 115
Query: 76 ctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttt--at 133
| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 114 ttgttgttatgagatgataaaacatgaatagtattttatgcgtgacttatgtttttaaat 55
Query: 134 tgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacggaaaa 186
| ||||| ||||||||| || |||||||||||||| ||||||||||
Sbjct: 54 tttttttaaaattttttcaaataagacggacgatcaaagttgagcacggaaaa 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaa 185
||||||||| || ||||||||||||||||||| ||||
Sbjct: 135 ttcaaataagacggacgatcaaagttgggcacagaaa 171
Score = 44.1 bits (22), Expect = 7e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 19 tttccgtgcccaacttt-atcgttcgtcttatttgaaa 55
||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 3 tttccgtgctcaactttgatcgtccgtcttatttgaaa 40
>RF01062;MIR812;AACV01021456.1/16145-15983 39947:Oryza sativa
Japonica Group
Length = 163
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 gattagtatttttatcgttattagatgataaaacatgaatagtactttatgcgtgactta 62
Query: 125 tgttttta 132
||||||||
Sbjct: 61 tgttttta 54
>RF01062;MIR812;AC093088.4/1764-1591 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 4e-24
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 152 cgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatgataaaa 93
Query: 98 catgaatagtactttatgtgtgact 122
||| |||||||||||||||||||||
Sbjct: 92 cataaatagtactttatgtgtgact 68
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 101/116 (87%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
|||||||||||||||||| |||||||||||||||| || || ||||||||||
Sbjct: 172 gtttccgtgcccaactttgatcgttcgtcttattt-aattttttttataattagtatttt 114
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 113 tattgctatgagatgataaaacatgaatagtactttatatgtgacttatgttttta 58
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 acgatcaaagttgggcacggaaa 185
|||||||||||||||||||||||
Sbjct: 149 acgatcaaagttgggcacggaaa 171
>RF01062;MIR812;AACV01019747.1/24938-24769 39947:Oryza sativa
Japonica Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 124 atgattagtatttttattgttattagattataaaacatgaatagtactttatgcgtgact 65
Query: 123 tatgttt 129
|||||||
Sbjct: 64 tatgttt 58
>RF01062;MIR812;AP008217.1/3029083-3028927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 107 bits (54), Expect = 6e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 110 attagtatttctattgttattagattataaaacatgaatagtattttatgcgtgacttat 51
Query: 126 gttttt 131
||||||
Sbjct: 50 gttttt 45
>RF01062;MIR812;AAAA02017762.1/94416-94244 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 6e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 151 cgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatgataaaa 92
Query: 98 catgaatagtactttatgtgtgacttatgttttta 132
|||||||| || ||||||||||||| || ||||||
Sbjct: 91 catgaatactattttatgtgtgactaattttttta 57
>RF01062;MIR812;AAAA02030816.1/30098-30254 39946:Oryza sativa Indica
Group
Length = 157
Score = 107 bits (54), Expect = 6e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 110 attagtatttctattgttattagattataaaacatgaatagtattttatgcgtgacttat 51
Query: 126 gttttt 131
||||||
Sbjct: 50 gttttt 45
>RF01062;MIR812;AAAA02000662.1/60323-60488 39946:Oryza sativa Indica
Group
Length = 166
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 120 atgattagtatttttattattattagattataaaacatgaatagtactttatgtgtgatt 61
Query: 123 tatgttttt 131
|||||||||
Sbjct: 60 tatgttttt 52
>RF01062;MIR812;AAAA02030037.1/1370-1196 39946:Oryza sativa Indica
Group
Length = 175
Score = 105 bits (53), Expect = 2e-22
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 39 gttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaac 98
||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 152 gttcgtcttatttgaaaattttttatgattattatttttattgttattagatgataaaac 93
Query: 99 atgaatagtactttatgtgtgacttatgttttta 132
||||||| |||||||||||||||| || ||||||
Sbjct: 92 atgaataatactttatgtgtgactaattttttta 59
>RF01062;MIR812;AP008214.1/23726311-23726477 39947:Oryza sativa
Japonica Group
Length = 167
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 122 atgattagtatttttatagttattagattataatacatgaatagtactttatgtgtgact 63
Query: 123 tatgttttt 131
|||||||||
Sbjct: 62 tatgttttt 54
>RF01062;MIR812;AACV01023281.1/4947-4778 39947:Oryza sativa Japonica
Group
Length = 170
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 64 tgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactt 123
|||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 123 tgattagtatttttattgttattagattataaaacatgaatagtactttatgcgtgactt 64
Query: 124 atgttttta 132
|| ||||||
Sbjct: 63 attttttta 55
>RF01062;MIR812;AP008210.1/12101104-12100931 39947:Oryza sativa
Japonica Group
Length = 174
Score = 105 bits (53), Expect = 2e-22
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 39 gttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaac 98
||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct: 151 gttcgtcttatttgaaatttttttatgattagtatttttattgttattaaatgataaaac 92
Query: 99 atgaatagtactttatgtgtga 120
||||||||||||||||||||||
Sbjct: 91 atgaatagtactttatgtgtga 70
>RF01062;MIR812;AACV01026889.1/4535-4695 39947:Oryza sativa Japonica
Group
Length = 161
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 116 atgattaatatttttattgttattagatgataaaacataaatagtactttatgcgtgact 57
Query: 123 tatgttttt 131
|||||||||
Sbjct: 56 tatgttttt 48
>RF01062;MIR812;CR855098.1/26082-26242 4530:Oryza sativa (rice)
Length = 161
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 114 atgattagtatttttattgttattagatgataatacatgaatagtactttatgtgtgact 55
Query: 123 tatgttttt 131
|| |||||
Sbjct: 54 aattttttt 46
>RF01062;MIR812;AAAA02025138.1/11002-11170 39946:Oryza sativa Indica
Group
Length = 169
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122 atgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 63
Query: 123 t 123
|
Sbjct: 62 t 62
>RF01062;MIR812;AAAA02017235.1/32696-32863 39946:Oryza sativa Indica
Group
Length = 168
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||| ||
Sbjct: 122 atgattaatatttttattgttattagatgataaaacataaataatactttatgtgtggct 63
Query: 123 tatgtttttattgtttt 139
|||||||||||| ||||
Sbjct: 62 tatgtttttattttttt 46
>RF01062;MIR812;AAAA02015035.1/36629-36800 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 2e-22
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| |||| |||||||| ||||||||||||||||||| |
Sbjct: 150 cgttcgtcttatttgaaaaacaattatgactagtatttttattgttattagatgataata 91
Query: 98 catgaatagtactttatgtgtgacttatgtttttattgtttt 139
|||||||||||||||||| |||||| || |||||||| ||||
Sbjct: 90 catgaatagtactttatgcgtgactaatatttttattttttt 49
>RF01062;MIR812;FJ032632.1/66474-66642 52545:Oryza alta
Length = 169
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AAAA02007524.1/33468-33642 39946:Oryza sativa Indica
Group
Length = 175
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 69
>RF01062;MIR812;AACV01015495.1/1482-1650 39947:Oryza sativa Japonica
Group
Length = 169
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 124 atgattagtatttttattgttattggatgataaaacatgaatagtactttatgtgtgact 65
>RF01062;MIR812;AP008208.1/14869928-14869757 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 9e-22
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 150 cgttcgtcttatttgaaaattttttatgattagtatttttattgttattagatgataaaa 91
Query: 98 catgaatagtactttatgtgtgact 122
|||||||||| |||||||||||||
Sbjct: 90 tatgaatagtattttatgtgtgact 66
>RF01062;MIR812;AACV01013166.1/3571-3410 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 9e-22
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 40 ttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaaca 99
|||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
Sbjct: 138 ttcgtcttatttgaaatttttttatgattagtatttttattgttattagatgataaaata 79
Query: 100 tgaatagtactttatgtgtgacttatgttttta 132
||||||||| ||||||||||||| || ||||||
Sbjct: 78 tgaatagtaatttatgtgtgactaattttttta 46
>RF01062;MIR812;AP004592.3/104215-104382 39947:Oryza sativa Japonica
Group
Length = 168
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 atgattagtatttttattgttattagatgataaaacataaatagtactttatgtgtgact 62
>RF01062;MIR812;AP005192.3/94290-94133 39947:Oryza sativa Japonica
Group
Length = 158
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 116 atgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 57
>RF01062;MIR812;AP003512.3/72419-72259 39947:Oryza sativa Japonica
Group
Length = 161
Score = 103 bits (52), Expect = 9e-22
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 141 atcgttcgtcttatttgaaatcttttgatgattaatatttttattgttattagatgataa 82
Query: 96 aacatgaatagtactttatgtgtga 120
|||||||||| ||||||||||||||
Sbjct: 81 aacatgaataatactttatgtgtga 57
>RF01062;MIR812;AAAA02038713.1/1148-1318 39946:Oryza sativa Indica
Group
Length = 171
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 124 atgattagtatttgtattgttattagatgataaaacatgaatagtattttatgtgtgact 65
>RF01062;MIR812;AP003443.4/111578-111408 39947:Oryza sativa Japonica
Group
Length = 171
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 123 atgattagtatttttattgttattagatgataaaacatgaatagcactttatgtgtgact 64
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gattagtatttttgttgttattagatgataaaacatgaatagtactttatgtgtgactta 65
>RF01062;MIR812;AACV01012794.1/451-282 39947:Oryza sativa Japonica
Group
Length = 170
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123 atgattagtatttttattgttattaaatgataaaacatgaatagtactttatgtgtgact 64
>RF01062;MIR812;AAAA02022475.1/22256-22085 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AACV01014053.1/26575-26406 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 9e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 123 atgattagtatttctattgttattagatgataaaacataaataacactttatgtgtgact 64
Query: 123 tatgtttt 130
||| ||||
Sbjct: 63 tatttttt 56
>RF01062;MIR812;AAAA02013629.1/14001-14173 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 9e-22
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 40 ttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaaca 99
|||||||||||||||| ||||||| ||||| ||||||||||||||||||||| |
Sbjct: 149 ttcgtcttatttgaaatttttttatgattattatttttattgttattagatgataaaata 90
Query: 100 tgaatagtactttatgtgtgacttatgttttta 132
||||||||||||||||||||||| || ||||||
Sbjct: 89 tgaatagtactttatgtgtgactaattttttta 57
>RF01062;MIR812;AAAA02011317.1/27519-27679 39946:Oryza sativa Indica
Group
Length = 161
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 55
>RF01062;MIR812;AACV01006398.1/10019-9855 39947:Oryza sativa
Japonica Group
Length = 165
Score = 103 bits (52), Expect = 9e-22
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 141 cgttcgtcttatttgaaatttttttatgattagtatttttattgctattagatgataaaa 82
Query: 98 catgaatagtactttatgtgtgact 122
||| |||||||||||||||||||||
Sbjct: 81 cattaatagtactttatgtgtgact 57
>RF01062;MIR812;AP008210.1/34581048-34581220 39947:Oryza sativa
Japonica Group
Length = 173
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AC051633.7/116553-116379 4530:Oryza sativa (rice)
Length = 175
Score = 103 bits (52), Expect = 9e-22
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 153 cgttcgtcttatttgaaattcttttatgattagtatttttattattattagatgataaaa 94
Query: 98 catgaatagtactttatgtgtgact 122
|||||||||||||||||||| ||||
Sbjct: 93 catgaatagtactttatgtgcgact 69
>RF01062;MIR812;AACV01009794.1/11451-11280 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 9e-22
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||| ||||||||||| || ||||| |||| |||||||| |||||||||
Sbjct: 153 atcgttcgacttatttgaaatttttttataattagcatttttattgttacgagatgataa 94
Query: 96 aacatgaatagtactttatgtgtgacttatgtttttattgttttt 140
||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 93 aacatgaatagtactttatttgtgacttatgtttttatttttttt 49
>RF01062;MIR812;AACV01004255.1/9861-10031 39947:Oryza sativa
Japonica Group
Length = 171
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgattagtatttttattattattagatgataaaacatgaatagtactttatgtgtgact 65
>RF01062;MIR812;AAAA02016179.1/4117-4272 39946:Oryza sativa Indica
Group
Length = 156
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 111 atgattagtatttttattgttattagatgataaaacatgaatattactttatgtgtgact 52
>RF01062;MIR812;AACV01011182.1/7873-7689 39947:Oryza sativa Japonica
Group
Length = 185
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 65
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 103
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 144
>RF01058;MIR806;AP003616.4/59947-60190 39947:Oryza sativa Japonica
Group
Length = 244
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 143
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 103 bits (52), Expect = 9e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 143
>RF01062;MIR812;AAAA02022479.1/15737-15568 39946:Oryza sativa Indica
Group
Length = 170
Score = 101 bits (51), Expect = 4e-21
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||| ||||||||||||||||| || |||| | ||||||| ||||||
Sbjct: 124 atgattagtatttttatcgttattagatgataaaatataaatatttctttatgcgtgact 65
Query: 123 tatgtttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacgg 182
|||||||||| |||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 64 tatgtttttaaagtttttcaaaagttttcaaataagacagacgattaaagttggacacgg 5
Query: 183 aaa 185
|||
Sbjct: 4 aaa 2
>RF01062;MIR812;AAAA02008040.1/12102-12272 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||||| || |||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 122 attagtagttttattattataagatgataaaacatgaatagtactttatatgtgacttat 63
Query: 126 gtttttattgttttt 140
||||||||| |||||
Sbjct: 62 gtttttatttttttt 48
>RF01062;MIR812;AP008212.1/4136542-4136710 39947:Oryza sativa
Japonica Group
Length = 169
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 122 attaatatttttattgttattagatgataaaatatgaatagtactttatgcgtgacttat 63
Query: 126 gttttta 132
|||||||
Sbjct: 62 gttttta 56
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 124 attagtatttttgttgttatgagatgataaaacatgaatagcactttatgtgtgacttat 65
Query: 126 gttttta 132
|||||||
Sbjct: 64 gttttta 58
>RF01062;MIR812;AP008215.1/17930701-17930860 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 4e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 64 tgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 114 tgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 56
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 124 attagtatttttattattatgagatgataaaacatgaatagtactttatgcgtgacttat 65
Query: 126 gttttta 132
|||||||
Sbjct: 64 gttttta 58
>RF01062;MIR812;AAAA02032978.1/4853-5023 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 4e-21
Identities = 100/116 (86%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||||||||||||||||| |||||| ||||||||||| | ||||||||||
Sbjct: 171 gtttccgtgcccaactttaatcgttcctcttatttgaatttttttcgtaattagtattt- 113
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 112 tattgttatgagatgataaaacatgaataatactttatgcgtgacttatgttttta 57
>RF01062;MIR812;AP004052.3/110986-110823 39947:Oryza sativa Japonica
Group
Length = 164
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 119 atgattagtatttttattgttattagatgataaaacatgaataatactttatgtatgact 60
Query: 123 tat 125
|||
Sbjct: 59 tat 57
>RF01062;MIR812;AAAA02001388.1/1048-1218 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 4e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaacatgaatagtaatttatgtgtgactta 64
>RF01062;MIR812;AC107315.1/134199-134032 4530:Oryza sativa (rice)
Length = 168
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 121 attagtatttttattgttattagattataaaacatgaatagtattttatgcgtgacttat 62
Query: 126 gttttta 132
|||||||
Sbjct: 61 gttttta 55
>RF01062;MIR812;AC091749.8/15907-15748 4530:Oryza sativa (rice)
Length = 160
Score = 101 bits (51), Expect = 4e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 64 tgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 125 tgattagtatttctattgctattagaagataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AAAA02018044.1/2103-2270 39946:Oryza sativa Indica
Group
Length = 168
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 122 attactatttatattgttattagattataaaatatgaatagtactttatgtgtgacttat 63
Query: 126 gttttta 132
|||||||
Sbjct: 62 gttttta 56
>RF01062;MIR812;CR855167.1/66190-66024 4530:Oryza sativa (rice)
Length = 167
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 119 attagtatttttattgttataagattataaaacatgaatagtactttatgtgtgacttat 60
Query: 126 gtt 128
|||
Sbjct: 59 gtt 57
>RF01058;MIR806;AAAA02032712.1/19270-19031 39946:Oryza sativa Indica
Group
Length = 240
Score = 101 bits (51), Expect = 4e-21
Identities = 160/200 (80%), Gaps = 1/200 (0%)
Strand = Plus / Plus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnn 61
|||| ||| |||||||||||| || |||| ||| | ||| ||||||||||||||
Sbjct: 21 taagcgcaaccatgagtttccatgtccaattttgaccgtccgtcttatttgaaattattt 80
Query: 62 natgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 121
||||||||||||| |||||||||||| | |||||||||||| ||||||||| | |||||
Sbjct: 81 tatgattagtatttttattgttattaggttataaaacatgaaaagtactttacgcgtgac 140
Query: 122 ttatgtttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacg 181
|||||||||| ||||| ||||||||| || ||||| |||||||| ||||
Sbjct: 141 ttatgttttttagttttttcaaacaaattcaaataagacgaacgattaaagttggacacg 200
Query: 182 gaaaatcatggctgcactta 201
|||| |||||||||| ||||
Sbjct: 201 gaaactcatggctgcgctta 220
Score = 73.8 bits (37), Expect = 8e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaa 54
|||| ||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 220 taagcgcagccatgagtttccgtgtccaactttaatcgttcgtcttatttgaa 168
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 101 bits (51), Expect = 4e-21
Identities = 164/204 (80%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnn 60
||||||||| | || ||||| ||||||||||||| ||| | |||||||||||||
Sbjct: 20 ttaagtgcaactataagttttcgtgcccaactttgatcatccgtcttatttgaacttttt 79
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
|| |||||||||| | ||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 80 ttataattagtatttttcttgttatgagatgataaaacatgaatagtactttatgcgtaa 139
Query: 121 cttatg-tttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggca 179
|||||| |||| | | ||| |||||||| || |||||| |||||||||||
Sbjct: 140 cttatgcttttaaatttttcaaaaaaaaaatcaaataagacggacgattaaagttgggca 199
Query: 180 cggaaaatcatggctgcacttaaa 203
||||||||||||||| ||||||||
Sbjct: 200 cggaaaatcatggctacacttaaa 223
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttga 53
||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 222 ttaagtgtagccatgattttccgtgcccaactttaatcgtccgtcttatttga 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcacttaaa 203
||||||||| || || ||||||||||||||||| ||| | || | ||||||||||
Sbjct: 73 ttcaaataagacggatgatcaaagttgggcacgaaaacttatagttgcacttaaa 19
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 101 bits (51), Expect = 4e-21
Identities = 164/204 (80%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnn 60
||||||||| | |||||||||||| |||| ||| ||||| ||||||||||||||
Sbjct: 20 ttaagtgcaactgtgagtttccgtgtccaattttgatcgtccgtcttatttgaaaacttt 79
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
|| |||||||||| | ||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 80 ttataattagtatttttgttgttatgagatgataaaacatgaatagtattttactcgtga 139
Query: 121 cttatgttttt-attgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggca 179
||||||||||| | | |||| ||||||||| || |||||||||||||||||
Sbjct: 140 cttatgtttttaaattttttcaaaatttattcaaataagacggacgatcaaagttgggcg 199
Query: 180 cggaaaatcatggctgcacttaaa 203
|| ||||||| ||||||||||||
Sbjct: 200 cgagaaatcatagctgcacttaaa 223
Score = 44.1 bits (22), Expect = 7e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaa 54
||||||||||| |||| || || |||||||||| ||||| |||||||||||||
Sbjct: 222 ttaagtgcagctatgatttctcgcgcccaactttgatcgtccgtcttatttgaa 169
>RF01062;MIR812;AP008215.1/10128587-10128414 39947:Oryza sativa
Japonica Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtattttatgtgtgact 67
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 66 aattttttta 57
>RF01062;MIR812;AC093953.2/91582-91415 39947:Oryza sativa Japonica
Group
Length = 168
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 123 atgattagtatttttattgttattagatgataaaacatgaatagtattttatgcgtgact 64
Query: 123 ta 124
||
Sbjct: 63 ta 62
>RF01062;MIR812;AAAA02035158.1/27030-27199 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 124 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtatgac- 66
Query: 123 tatgtttttattgttttt 140
||| |||||||| |||||
Sbjct: 65 tatttttttatttttttt 48
>RF01062;MIR812;DQ280619.1/7388-7543 39946:Oryza sativa Indica Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 71 tatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgtttt 130
||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 112 tatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttt 53
Query: 131 ta 132
||
Sbjct: 52 ta 51
>RF01062;MIR812;AP008211.1/5292808-5292644 39947:Oryza sativa
Japonica Group
Length = 165
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 122 atgattagtatttttattgttattagattataaaacataaattgtactttatgtgtgact 63
Query: 123 tatgttttta 132
||| ||||||
Sbjct: 62 tattttttta 53
>RF01062;MIR812;AC137071.3/81351-81514 39947:Oryza sativa Japonica
Group
Length = 164
Score = 99.6 bits (50), Expect = 1e-20
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 142 cgttcgtcttatttgaaattttgttatgattagtatttttattgctattagatgataaaa 83
Query: 98 catgaatagtactttatgtgtga 120
|||||||| ||||||||||||||
Sbjct: 82 catgaataatactttatgtgtga 60
>RF01062;MIR812;AP003237.2/81583-81416 39947:Oryza sativa Japonica
Group
Length = 168
Score = 99.6 bits (50), Expect = 1e-20
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
||||||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||
Sbjct: 122 gattagtatttttatcattattagatgacaaaacatgaatagtaatttatgcgtgactta 63
Query: 125 tgtttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacggaa 184
|||||||| | ||||| || |||||| | |||||||||||||||||||| |||
Sbjct: 62 tgtttttaatttttttaaaaaaattttaaataagatagacgatcaaagttgggcacagaa 3
Query: 185 aa 186
||
Sbjct: 2 aa 1
>RF01062;MIR812;AC125471.3/90854-90684 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |
Sbjct: 124 atgattagtatttttattgttgttagatgataaaacatgaataatactttatgtgtgatt 65
Query: 123 tatgttttta 132
||| ||||||
Sbjct: 64 tatcttttta 55
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgact 67
Query: 123 ta 124
||
Sbjct: 66 ta 65
>RF01062;MIR812;AP006849.2/17157-17317 39947:Oryza sativa Japonica
Group
Length = 161
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 115 atgattagtatttttgttgttattagatgataaaacatgaatagtattttatgtgtgact 56
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 55 aattttttta 46
>RF01062;MIR812;AP008212.1/25684116-25683949 39947:Oryza sativa
Japonica Group
Length = 168
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 119 gattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 62
>RF01062;MIR812;AC133008.3/40392-40227 39947:Oryza sativa Japonica
Group
Length = 166
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttatttttattagatgataaaatatgaatagtactttatgtgtgact 67
Query: 123 ta 124
||
Sbjct: 66 ta 65
>RF01062;MIR812;AP003219.3/57542-57709 39947:Oryza sativa Japonica
Group
Length = 168
Score = 99.6 bits (50), Expect = 1e-20
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| || |||||||||| ||||| |||||||||||||
Sbjct: 153 atcgttcgtcttatttgaaaattttttataattagtatttttattgctattagatgataa 94
Query: 96 aacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||
Sbjct: 93 aacatgaatagtattttatgtgtgact 67
>RF01062;MIR812;AACV01006839.1/7979-8153 39947:Oryza sativa Japonica
Group
Length = 175
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 128 atgattagtatttttattgttattagatgataaaacatgaatagtaattcatgtgtgact 69
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 68 aattttttta 59
>RF01062;MIR812;AAAA02003990.1/25355-25184 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgttattacatgataaaacatgaatagtactttatgtgtga 69
>RF01062;MIR812;AACV01001001.1/3483-3308 39947:Oryza sativa Japonica
Group
Length = 176
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 129 atgattagtatttttattattattagatgataaaacatgaataatactttatgtgtgact 70
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 69 aattttttta 60
>RF01062;MIR812;AAAA02008612.1/20625-20793 39946:Oryza sativa Indica
Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |
Sbjct: 127 atgattagtgcttctattgttattagattataaaacatgaatagtactttatgcgtgagt 68
Query: 123 tatgtttttattgttttt 140
||||||||| | ||||||
Sbjct: 67 tatgtttttttagttttt 50
>RF01062;MIR812;AACV01027092.1/7278-7444 39947:Oryza sativa Japonica
Group
Length = 167
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 119 attagtatttctattgttataatatgataaaatatgaatagtactttatatgtgacttat 60
Query: 126 gtttttattgtttt 139
| ||||||| ||||
Sbjct: 59 gattttattttttt 46
>RF01062;MIR812;AY946549.1/36-208 4530:Oryza sativa (rice)
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtattttatgtgtgact 67
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 66 aattttttta 57
>RF01062;MIR812;AACV01022388.1/14766-14591 39947:Oryza sativa
Japonica Group
Length = 176
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgattactacttttattgttattagatgataaaacatgaatagtactttatgtgtgact 70
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 69 aattttttta 60
>RF01062;MIR812;DQ280674.1/7188-7361 4529:Oryza rufipogon
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||
Sbjct: 152 cgttcgtcttatttgaaaaaagattatgtttattatttttattgttattagatgataaaa 93
Query: 98 catgaatagtactttatgtgtgacttatgttttta 132
|||||||| |||||||||||||||| || ||||||
Sbjct: 92 catgaatattactttatgtgtgactaattttttta 58
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnn 61
||||||||||||| |||||||| || |||||| ||||| ||||||||||||||
Sbjct: 21 taagtgcagccataagtttccgcgcttaactttgatcgtccgtcttatttgaaatttttt 80
Query: 62 natgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 121
|| ||||| |||| | ||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 81 tataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtgac 140
Query: 122 ttatgttttta 132
|||||||||||
Sbjct: 141 ttatgttttta 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcactta 201
||||||||| || ||||||||||||| || |||||| | |||||||||||||
Sbjct: 73 ttcaaataagacggacgatcaaagttaagcgcggaaacttatggctgcactta 21
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/139 (83%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnn 61
||||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||
Sbjct: 21 taagtacagccgtgagtttccgcgtccaactttgatcgttcgttttatttgaaatttttt 80
Query: 62 natgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 121
|| ||||| |||| | ||||||| ||||||||||||||||||| ||||||| |||||
Sbjct: 81 tataattagcatttttgttgttataagatgataaaacatgaataatactttactcgtgac 140
Query: 122 ttatgtttttattgttttt 140
||||||||||||| |||||
Sbjct: 141 ttatgtttttatttttttt 159
>RF01062;MIR812;AP008209.1/13858064-13858230 39947:Oryza sativa
Japonica Group
Length = 167
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 122 atgattagtatttttattgttattagatgataaaacatgaacggtactttatgtgtggtt 63
Query: 123 tatgttttt 131
|||||||||
Sbjct: 62 tatgttttt 54
>RF01062;MIR812;AACV01007421.1/4710-4538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 6e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 125 attaatatttctattgttattagatgataaaatatgaatagtactttatgtgtgact 69
>RF01062;MIR812;AL837527.2/105187-105025 4530:Oryza sativa (rice)
Length = 163
Score = 97.6 bits (49), Expect = 6e-20
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| |||||||||||||| ||||||
Sbjct: 141 cgttcgtcttatttgaaaaaagattatgattagtatttttattgttattagatcataaaa 82
Query: 98 catgaatagtactttatgtgtg 119
||||||||||||||||| ||||
Sbjct: 81 catgaatagtactttatatgtg 60
>RF01062;MIR812;AP003838.3/75445-75617 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 126 atgattagtatttttgttgttattagatgataaaacatgaatagtactttacgtgtgact 67
Query: 123 tatgttttt 131
|| |||||
Sbjct: 66 aattttttt 58
>RF01062;MIR812;AAAA02025509.1/34942-34776 39946:Oryza sativa Indica
Group
Length = 167
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 120 atgattagtatttttgttgttattagacgataaaacatgaatagtactttatgtgtgact 61
Query: 123 t 123
|
Sbjct: 60 t 60
>RF01062;MIR812;AP005163.3/84135-84299 39947:Oryza sativa Japonica
Group
Length = 165
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 118 atgattagtatttttattgttattagatgataaaacatgaatattactttatgtctgact 59
Query: 123 tatgttttt 131
|| |||||
Sbjct: 58 aattttttt 50
>RF01062;MIR812;AP005395.3/150535-150362 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 124 atgattaatatttttattgttattagatgataaaatatgaatattactttatgtgcgact 65
Query: 123 tatgttttt 131
|||||||||
Sbjct: 64 tatgttttt 56
>RF01062;MIR812;AC217582.2/115116-115285 4537:Oryza punctata
Length = 170
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 atgattagtatttttgttgttattagatgataaaacataaatagtactttatgtgtgact 62
Query: 123 t 123
|
Sbjct: 61 t 61
>RF01062;MIR812;AC136219.2/48203-48371 39947:Oryza sativa Japonica
Group
Length = 169
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 119 atgattaatatttttattgttattagatgataaaacatgaataatactttatgtgtgact 60
Query: 123 t 123
|
Sbjct: 59 t 59
>RF01062;MIR812;AP008214.1/17882292-17882454 39947:Oryza sativa
Japonica Group
Length = 163
Score = 97.6 bits (49), Expect = 6e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtg 119
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 116 atgattagtatttttattgttattggatgataaaacatgaatagtactttatgtgtg 60
>RF01062;MIR812;AP003250.3/7075-6904 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 6e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 125 atgattagtatttatactgttattagattataaaacatgaatagtactttatgcgtgact 66
Query: 123 tatgttttt 131
| |||||||
Sbjct: 65 tttgttttt 57
>RF01062;MIR812;AACV01022718.1/12342-12516 39947:Oryza sativa
Japonica Group
Length = 175
Score = 97.6 bits (49), Expect = 6e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatg 115
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgattagtatttatattgttattagatgataaaacatgaatagtactttatg 76
>RF01062;MIR812;AP008208.1/19948735-19948578 39947:Oryza sativa
Japonica Group
Length = 158
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 114 atgattagaatttttattgttattagatgataaaacatgaatagtactttatatgtgact 55
Query: 123 t 123
|
Sbjct: 54 t 54
>RF01062;MIR812;AACV01025273.1/3037-2868 39947:Oryza sativa Japonica
Group
Length = 170
Score = 97.6 bits (49), Expect = 6e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 124 atgattagtatttttgttgttattagatgataaaacatgaatagtactttatgtatgact 65
Query: 123 tatgtttttattgtttt 139
|| |||| ||| ||||
Sbjct: 64 aattttttaattttttt 48
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 97.6 bits (49), Expect = 6e-20
Identities = 110/130 (84%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 4 aagtgcagccatgagtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnn 62
||||||| |||| |||||||| |||||| |||| ||||||||||||||| |||
Sbjct: 22 aagtgcaaccataagtttccgcgcccaattttaatcgttcgtcttattt-aaattttttt 80
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 81 ataattagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgact 140
Query: 123 tatgttttta 132
||| ||||||
Sbjct: 141 tatattttta 150
>RF01062;MIR812;AAAA02000668.1/58953-58791 39946:Oryza sativa Indica
Group
Length = 163
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 119 atgattactatttttattgttattagatgataaaacatgaatagtactttacgtgtgact 60
>RF01062;MIR812;AAAA02027210.1/812-640 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgcgact 67
>RF01062;MIR812;AAAA02009208.1/15265-15096 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 125 atgattagtattttaattgttattagattataaaacatgaatagtactttatgtgtgact 66
>RF01062;MIR812;ABRL01001295.1/1685-1858 65489:Oryza barthii
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttgtgtgtgact 68
>RF01062;MIR812;AAAA02008165.1/41728-41556 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 atgattagcatttctattgctattagatgataaaatatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AACV01022234.1/2807-2619 39947:Oryza sativa Japonica
Group
Length = 189
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 142 atgattattatttttatttttattagatgataaaacatgaataatactttatgtgtgact 83
Query: 123 tatgtttt 130
||| ||||
Sbjct: 82 tatctttt 75
>RF01062;MIR812;AP008218.1/8955365-8955194 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttacgtgtgact 68
>RF01062;MIR812;AAAA02023282.1/1611-1439 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 125 atgattagtatttttattgctattagatgataaaacataaatagtactttatgtgtgact 66
>RF01062;MIR812;AACV01025173.1/5566-5398 39947:Oryza sativa Japonica
Group
Length = 169
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 123 atgattagtatttttattgttattaaatgataaaacatgaatagtactttatgtatgact 64
>RF01062;MIR812;AACV01009504.1/253-81 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacatgaataatactttatgtgtgact 67
>RF01062;MIR812;AC105729.2/60866-60693 39947:Oryza sativa Japonica
Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 127 atgattagtatttttattgctattagatgataaaacatgaataatactttatgtgtgact 68
>RF01062;MIR812;AC136218.2/76973-77145 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacataaatagtactttatgtgtgact 67
>RF01062;MIR812;AACV01025476.1/30318-30481 39947:Oryza sativa
Japonica Group
Length = 164
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 120 atgattagtatttctgttgttattagatgataaaacataaataatactttatgtgtgact 61
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 123 attagtatttttattgttatgagatgataaaacatgaatagtactttatacgtgacttat 64
Query: 126 gttt 129
||||
Sbjct: 63 gttt 60
>RF01062;MIR812;AAAA02006308.1/42881-42720 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 114 atgattagtattcttattgttattagatgataaaacatgaacagtactttatgtgtgact 55
>RF01062;MIR812;AAAA02012023.1/6971-6801 39946:Oryza sativa Indica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 125 atgattagtatttttattggtattagatgataaaacataaatagtactttatgtgtgact 66
>RF01062;MIR812;AP008211.1/14509030-14508859 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 125 atgattagtattt-tattgttattagatgataaaacatgaataatactttatgtgtgact 67
>RF01062;MIR812;AACV01014398.1/6458-6286 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagcactttatgtgtgact 67
>RF01062;MIR812;AP008207.1/2168797-2168971 39947:Oryza sativa
Japonica Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 155 atcgttcgtcttatttgaaaaataattatgattagtattattattattattagatgataa 96
Query: 96 aacatgaatagtactttatgtgtgacttatgttttta 132
||||||||||||||||||||||||| || ||||||
Sbjct: 95 tgcatgaatagtactttatgtgtgactaatattttta 59
>RF01062;MIR812;AACV01002199.1/17294-17469 39947:Oryza sativa
Japonica Group
Length = 176
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 129 atgattagtatttttattgttattagatgataaaacctggatagtactttatgtgtgact 70
>RF01062;MIR812;AAAA02015466.1/16288-16449 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115 atgattagtatttatattattattagatgataaaacatgaatagtactttatgtatgact 56
>RF01062;MIR812;AP008217.1/13949322-13949158 39947:Oryza sativa
Japonica Group
Length = 165
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||| |||||||||||||||||| ||||| ||||||||| |||| |
Sbjct: 121 atgattagtatttttattattattagatgataaaacacgaataatactttatgcgtgagt 62
Query: 123 tatgtttttatt 134
||||||||||||
Sbjct: 61 tatgtttttatt 50
>RF01062;MIR812;AAAA02000154.1/12707-12879 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||| ||||| |||| |||||||||||||||
Sbjct: 151 cgttcgtcttatttgaaatttttttatgattattatttgtattactattagatgataaaa 92
Query: 98 catgaatagtactttatgtgtgact 122
|||||||||||||||||||||||||
Sbjct: 91 catgaatagtactttatgtgtgact 67
>RF01062;MIR812;AC137922.3/18623-18453 39947:Oryza sativa Japonica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 78 attgttattagatgataaaacatgaatagtactttatgtgtgacttatgttt 129
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 attgttataagatgataaaacatgaatagtactttatgtgtgacttatgttt 60
>RF01062;MIR812;AACV01002976.1/6404-6578 39947:Oryza sativa Japonica
Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 128 atgattaatatttttattgttattagatgataaaatatgaatagtactttatgtgtgact 69
>RF01062;MIR812;AACV01020402.1/13913-13776 39947:Oryza sativa
Japonica Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 109 atgattagtatttttgttgttattagatgataaaatatgaatagtattttatgtgtgact 50
Query: 123 tatgtttttatt 134
|| ||||||||
Sbjct: 49 aatttttttatt 38
>RF01062;MIR812;AACV01021504.1/5879-5708 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 125 atgattattatttttattgttattagatggtagaacatgaatagtactttatgtgtgact 66
Query: 123 tatgtttt 130
||| ||||
Sbjct: 65 tatttttt 58
>RF01062;MIR812;AC146702.1/14013-13844 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 28 ccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttatt 86
|||||||| ||||| |||||||||||||| || |||||||||| |||||||| |
Sbjct: 160 ccaactttgatcgtccgtcttatttgaaatttttttataattagtatttttattgttagt 101
Query: 87 agatgataaaacatgaatagtactttatgtgtgacttatgttttt 131
|||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 100 agattataaaacatgaatagtattttatgtgtgatttatgttttt 56
>RF01062;MIR812;AC114983.6/110451-110622 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atgattactatttttattgttgttagatgataaaacatgaatagtactttatgtgtgact 66
>RF01062;MIR812;AP008217.1/4338916-4338753 39947:Oryza sativa
Japonica Group
Length = 164
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 116 atgattagtatttttattgttattagatgataaaatatgaatagtattttatgtgtgact 57
>RF01062;MIR812;AAAA02029330.1/4924-4752 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||
Sbjct: 151 cgttcgtcttatttgaaaattttttatgattagtatttttattgctattagatgttaaaa 92
Query: 98 catgaatagtactttatgtgtgact 122
||| |||||||||||||||||||||
Sbjct: 91 cataaatagtactttatgtgtgact 67
>RF01062;MIR812;AP003931.3/11982-12155 39947:Oryza sativa Japonica
Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 126 atgattagtatttatattgttattagatgataaaacatgaataatactttatatgtgact 67
>RF01062;MIR812;AP004991.3/152028-151859 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 67 ttagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttagtatttttgttgttattagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AP004687.2/30998-30841 39947:Oryza sativa Japonica
Group
Length = 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 114 atgattagtatttttattgctattagatgataaaacatgaatagtactttgtgtgtgact 55
>RF01062;MIR812;AC105729.2/7494-7320 39947:Oryza sativa Japonica
Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaatatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AP008207.1/7388120-7387948 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 125 atgattactatttttattgttattagatgataaaacataaatagtactttatgtgtgact 66
>RF01062;MIR812;AP002094.1/81339-81168 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126 atgattattatttttattgttattagatgataaaacatgaataatactttatgtgtgact 67
>RF01062;MIR812;AP008208.1/1936493-1936324 39947:Oryza sativa
Japonica Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 123 atgattagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact 64
>RF01062;MIR812;AACV01010047.1/12882-12711 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 atgattagtatttttattgctattacatgataaaacatgaatagtactttatgtgtgact 67
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 84 atgattagtatttttattgctattagatgataaaacatgaataatactttatgtgtgact 143
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgattagtatttttgttgctattagatgataaaacatgaatagtactttatgtgtgact 143
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 95.6 bits (48), Expect = 2e-19
Identities = 161/201 (80%), Gaps = 2/201 (0%)
Strand = Plus / Plus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnn 61
|||| ||||||||||||||| | |||||| ||| ||||| ||||||||||||||
Sbjct: 21 taagcgcagccatgagtttctgcgcccaattttgatcgtccgtcttatttgaaatttttt 80
Query: 62 natgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 121
|| ||||| |||| ||||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 81 tataattagcatttttattgttatgagatgataaaacataaatagtactttactcgtgac 140
Query: 122 ttatgttttt-attgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcac 180
|| ||||||| ||| |||| ||||||||| || ||| |||||||||||| |
Sbjct: 141 ttctgtttttaatttttttaaaaaagttttcaaataagacgaacggtcaaagttgggcgc 200
Query: 181 ggaaaatcatggctgcactta 201
||||| ||||||||||||||
Sbjct: 201 agaaaaccatggctgcactta 221
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaa 55
|||||||||||||| |||| | |||||||||| | ||||||||||||||||||
Sbjct: 221 taagtgcagccatggttttctgcgcccaactttgaccgttcgtcttatttgaaa 168
>RF01062;MIR812;AACV01018581.1/23632-23453 39947:Oryza sativa
Japonica Group
Length = 180
Score = 93.7 bits (47), Expect = 9e-19
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||
Sbjct: 160 atcgttcgtcttatttaaaatttttttatgattagtatttttattgctattagatgctaa 101
Query: 96 aacatgaatagtactttatgtgtgacttatgttttt 131
|| |||||||||||||||||||||||| || |||||
Sbjct: 100 aatatgaatagtactttatgtgtgactaattttttt 65
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 114 attagtatttttattgttataagatgataaaacatgaatagtactttactcgtgacttat 55
Query: 126 gttttta 132
|||||||
Sbjct: 54 gttttta 48
>RF01062;MIR812;AAAA02007619.1/8763-8592 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 122 attagtatttttgttgttatgagatgataaaatatgaatagcactttatgtgtgacttat 63
Query: 126 gttttta 132
|||||||
Sbjct: 62 gttttta 56
>RF01062;MIR812;AAAA02003779.1/37338-37509 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 123 attagtatttttgttgttacgagatgataaaatatgaatagtactttatgtgtgacttat 64
Query: 126 gttttta 132
|||||||
Sbjct: 63 gttttta 57
>RF01062;MIR812;AAAA02021919.1/31168-31327 39946:Oryza sativa Indica
Group
Length = 160
Score = 93.7 bits (47), Expect = 9e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactt 123
||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120 gattaatatttttattgttattagatgataaaacatgaatagtactttatgtatgactt 62
>RF01062;MIR812;AP008214.1/15372362-15372531 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||| |||||||||||||||||||||||| || |||
Sbjct: 124 atgattagtatttttattgttattagattataaaacatgaatagtactttatgcgtaact 65
Query: 123 tat 125
|||
Sbjct: 64 tat 62
>RF01062;MIR812;AACV01021873.1/15988-15824 39947:Oryza sativa
Japonica Group
Length = 165
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||
Sbjct: 116 attagtatttttattgttgttagatgataaaacatgattaatactttatgtgtgacttat 57
Query: 126 gttttta 132
||||||
Sbjct: 56 tttttta 50
>RF01062;MIR812;AAAA02032459.1/5529-5364 39946:Oryza sativa Indica
Group
Length = 166
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 118 attagtatttttattgttataagatgataaaatatgaatagtactttatgcgtgacttat 59
Query: 126 gttttta 132
||||||
Sbjct: 58 attttta 52
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 115 attaatatttttattgttatgagatgataaaacatgaatagtactttattcgtgacttat 56
Query: 126 gttttta 132
|||||||
Sbjct: 55 gttttta 49
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 93.7 bits (47), Expect = 9e-19
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| || ||||| |||| ||||||||| |||||||||
Sbjct: 155 atcgttcgtcttatttgaaatttttttataattagcatttttattgttatgagatgataa 96
Query: 96 aacatgaatagtactttatgtgtgacttatgttttt 131
|||||||||||||||||| |||||||||||||||
Sbjct: 95 aacatgaatagtactttactcgtgacttatgttttt 60
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 98/116 (84%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||||| ||| |||||| |||||||||||||||| ||| || ||||||||||
Sbjct: 172 gtttccgcgcctaactttgatcgttcgtcttatttaaaatttttttataattagtattta 113
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
||||||||| ||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 112 tattgttatgagatgataaaacatgaatagtactttactcgtaacttatgttttta 57
>RF01062;MIR812;AP008218.1/22147224-22147394 39947:Oryza sativa
Japonica Group
Length = 171
Score = 93.7 bits (47), Expect = 9e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 64 tgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 123 tgattagtatttttattgttattagatgataaaacataattagtactttatgtgtgact 65
>RF01062;MIR812;ABRL01001819.1/15713-15880 65489:Oryza barthii
Length = 168
Score = 93.7 bits (47), Expect = 9e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
|||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaatatgaatattactttatgtgtgactta 62
>RF01062;MIR812;AP008207.1/33291462-33291623 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 9e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttt 131
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 109 tattgttattagatgataaaacatgaatagtactttatgcgtgacttatattttt 55
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||
Sbjct: 123 attagtatttttattgtcatgagatgataaaacatgaatagtactttatacgtgacttat 64
Query: 126 gttttta 132
|||||||
Sbjct: 63 gttttta 57
>RF01062;MIR812;AL845342.2/104516-104684 4530:Oryza sativa (rice)
Length = 169
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| |||||||||||||| |||||||||||||||||| |||||
Sbjct: 121 attagtatttttgttgttatgagatgataaaacataaatagtactttatgtgtgtcttat 62
Query: 126 gttttta 132
|||||||
Sbjct: 61 gttttta 55
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 113 attagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgacttat 54
Query: 126 gttttta 132
|||||||
Sbjct: 53 gttttta 47
>RF01062;MIR812;AACV01004021.1/2492-2654 39947:Oryza sativa Japonica
Group
Length = 163
Score = 93.7 bits (47), Expect = 9e-19
Identities = 102/122 (83%), Gaps = 10/122 (8%)
Strand = Plus / Minus
Query: 67 ttagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatg 126
||||||||| | || |||| |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 112 ttagtatttttgtttttatgagatgataaaacatgaatagcactatatgtgtgacttatg 53
Query: 127 tttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacggaaaa 186
|||||| | ||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct: 52 tttttaattttt----------ttcaaataagacagacgatcaaagttgagcacggaaaa 3
Query: 187 tc 188
||
Sbjct: 2 tc 1
>RF01062;MIR812;AP005116.3/104187-104356 39947:Oryza sativa Japonica
Group
Length = 170
Score = 93.7 bits (47), Expect = 9e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
|||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 122 gattggtatttttattgttattagatgataaaacatgaatagtacgttatgtgtgac-ta 64
Query: 125 tgtttttattgtttt 139
| |||||||| ||||
Sbjct: 63 tttttttattttttt 49
>RF01062;MIR812;AC112159.2/7868-7704 39947:Oryza sativa Japonica
Group
Length = 165
Score = 93.7 bits (47), Expect = 9e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 71 tatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 112 tatttttattgttattagatgataaaacataaatagtactttatgtgtgacttat 58
>RF01062;MIR812;AP008209.1/13818681-13818846 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 70 gtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttt 129
|||||| |||||||||||||| ||||||||||||||||||||||||||||||| || |||
Sbjct: 120 gtatttttattgttattagataataaaacatgaatagtactttatgtgtgactaattttt 61
Query: 130 tta 132
|||
Sbjct: 60 tta 58
>RF01062;MIR812;AAAA02015747.1/13525-13343 39946:Oryza sativa Indica
Group
Length = 183
Score = 93.7 bits (47), Expect = 9e-19
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 39 gttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaac 98
||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 160 gttcgtcttatttgaaaactttttatgattaatattt-tattgttattagatgataaaac 102
Query: 99 atgaatagtactttatgtgt 118
||||||||||||||||||||
Sbjct: 101 atgaatagtactttatgtgt 82
>RF01062;MIR812;AAAA02001056.1/25017-25191 39946:Oryza sativa Indica
Group
Length = 175
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 125 attagtatttttatggttattagatgataaaacatgattaatactttatgtgtgacttat 66
Query: 126 gttttta 132
||||||
Sbjct: 65 cttttta 59
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 98/116 (84%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||| ||||||||||||| |||||||| |||||||||| || ||||||||||
Sbjct: 172 gtttctgtgcccaactttaatcgttcgttttatttgaaatttttttataattagtatttt 113
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 112 tgttgttatgagatgataaaacatgaatagtgctttactcgtgacttatgttttta 57
>RF01062;MIR812;AP006186.3/94692-94521 39947:Oryza sativa Japonica
Group
Length = 172
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||
Sbjct: 123 attagtatttttattgttatgagatgataaaatatgaatagtactttatacgtgacttat 64
Query: 126 gttttta 132
|||||||
Sbjct: 63 gttttta 57
>RF01062;MIR812;AP008210.1/16542708-16542543 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 119 attagtatttttattgttaggagatgataaaacatgaatagaactttatgcgtgacttat 60
Query: 126 gttttta 132
|||||||
Sbjct: 59 gttttta 53
>RF01062;MIR812;AC122149.2/46861-46700 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 112 attagtatttttattgttgttagatgataaaacatgaataatactttatgcgtgacttat 53
Query: 126 gttttta 132
||||||
Sbjct: 52 cttttta 46
>RF01062;MIR812;AAAA02027864.1/12883-12726 39946:Oryza sativa Indica
Group
Length = 158
Score = 93.7 bits (47), Expect = 9e-19
Identities = 90/104 (86%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||
Sbjct: 138 atcgttcgtcttatttaaaatttttttatgattagttttt-tattgttattagatgataa 80
Query: 96 aacatgaatagtactttatgtgtgacttatgtttttattgtttt 139
|||||||||| ||||||||||||||| ||| |||||||| ||||
Sbjct: 79 aacatgaataatactttatgtgtgac-tatttttttattttttt 37
>RF01062;MIR812;AP008215.1/17538737-17538909 39947:Oryza sativa
Japonica Group
Length = 173
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaacatgaataatattttttgtgtgact 67
Query: 123 tat 125
|||
Sbjct: 66 tat 64
>RF01062;MIR812;AP005925.3/14919-14762 39947:Oryza sativa Japonica
Group
Length = 158
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 110 atgattagtatttttgttgttattagatgataaaatatgaatagtactttatgcgtgact 51
Query: 123 tat 125
|||
Sbjct: 50 tat 48
>RF01062;MIR812;AACV01024634.1/12356-12518 39947:Oryza sativa
Japonica Group
Length = 163
Score = 93.7 bits (47), Expect = 9e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 116 atgattagtattttatttgttattagatgataaaacatgaataatactttatgtgtggct 57
Query: 123 tatgtttttat 133
||| |||||||
Sbjct: 56 tatttttttat 46
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 9e-19
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||||| |||||||||| || || |||||||||||||| || ||||||||||
Sbjct: 160 gtttccgcgcccaactttgatagtccgtcttatttgaaatttttttataattagtatttt 101
Query: 77 tattgttattagatgataaaacatgaatagtactttatgt 116
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 100 tattgttataagatgataaaacatgaatagtactttatgt 61
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 117 attagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgacttat 58
Query: 126 gttttta 132
|||||||
Sbjct: 57 gttttta 51
>RF01062;MIR812;AAAA02014347.1/973-1134 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 9e-19
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 39 gttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaac 98
||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||
Sbjct: 139 gttcgtcttatttgaaaaaaatttatgattagtatctgtattgctattagatgataaaac 80
Query: 99 atgaatagtactttatgtgtgact 122
|||||||||||| |||||||||||
Sbjct: 79 atgaatagtactctatgtgtgact 56
>RF01062;MIR812;AAAA02014312.1/14008-14177 39946:Oryza sativa Indica
Group
Length = 170
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| |||||||||||||||||| |||||||| | |||||||||
Sbjct: 122 attagtatttttattgttataagatgataaaacatgaatcgtactttacgcgtgacttat 63
Query: 126 gttttta 132
|||||||
Sbjct: 62 gttttta 56
>RF01062;MIR812;AAAA02029602.1/30944-31105 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 9e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 116 atgattaatatttttattgttattagatgataaaacatgaataatactttatgcgtgatt 57
Query: 123 tatgtttttat 133
||| |||||||
Sbjct: 56 tatttttttat 46
>RF01062;MIR812;AC133778.4/73481-73322 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 115 atgattagtatttttattgttattagatgataaaatatgaatagtactttacgcgtgact 56
Query: 123 tat 125
|||
Sbjct: 55 tat 53
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 93.7 bits (47), Expect = 9e-19
Identities = 110/132 (83%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnn 60
|||| |||| |||| ||||||||| ||||| ||| ||||| ||||||||||||||
Sbjct: 20 ttaaatgcaaccataagtttccgtacccaattttgatcgtccgtcttatttgaaattttt 79
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
|| |||||||||| | ||||||| |||||||||||||| |||||||||||| ||||
Sbjct: 80 ttataattagtatttttgttgttatgagatgataaaacataaatagtactttactcgtga 139
Query: 121 cttatgttttta 132
||||||||||||
Sbjct: 140 cttatgttttta 151
>RF01062;MIR812;AAAA02012237.1/9154-8991 39946:Oryza sativa Indica
Group
Length = 164
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||| |||||||||||||||||| || ||||||||| |||||||||
Sbjct: 118 attagtatttttattgttgttagatgataaaacatgattaatactttatgcgtgacttat 59
Query: 126 gtttttattgtttt 139
|||||||| ||||
Sbjct: 58 ctttttattttttt 45
>RF01062;MIR812;AAAA02020865.1/43524-43353 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||| ||| || |||| ||||| |||||||||||||||||||
Sbjct: 152 atcgttcgtcttatttaaaaaatttttataattaatatttttattgttattagatgataa 93
Query: 96 aacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||
Sbjct: 92 aacatgaatagtaatttatgtgtgact 66
>RF01062;MIR812;AAAA02015677.1/34838-34677 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 116 atgattagtatttttattattattagatgatgaaacatgaatagtactttatgtgtga 59
>RF01062;MIR812;AACV01006189.1/16353-16196 39947:Oryza sativa
Japonica Group
Length = 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 111 atgattagtatttttgttgttattagatgataaaacatgaatagtattttatgtgagact 52
Query: 123 ta 124
||
Sbjct: 51 ta 50
>RF01062;MIR812;AAAA02004035.1/11516-11341 39946:Oryza sativa Indica
Group
Length = 176
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||| |
Sbjct: 128 atgattagtatttttattgttgttagatgataaaacatgaataatattttatgtgtgatt 69
Query: 123 tatgttttta 132
||| ||||||
Sbjct: 68 tatcttttta 59
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 110 attagtatttttgttgttatgagatgataaaacatgaatagtactttactcgtgacttat 51
Query: 126 gtttttattgtttt 139
||||||||| ||||
Sbjct: 50 gtttttattttttt 37
>RF01062;MIR812;AC123527.3/68856-69028 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 127 atgattagtatttttattgttattatatggtaaaacattaatagtactttatgtgtgact 68
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 67 aattttttta 58
>RF01062;MIR812;AC145127.1/834223-834050 39947:Oryza sativa Japonica
Group
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| |||||||||| || ||||||||||||||||||| |
Sbjct: 152 cgttcgtcttatttgaaaaataattatgattagtaattttattgttattagatgataata 93
Query: 98 catgaatagtactttatgtgtgacttatgttttta 132
|||||||||| ||||||||||||| || ||||||
Sbjct: 92 gatgaatagtattttatgtgtgactaatattttta 58
>RF01062;MIR812;AAAA02018371.1/438-593 39946:Oryza sativa Indica
Group
Length = 156
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||
Sbjct: 112 attagtatttttattgttattagatgataaaatataaatagtactttatgtgtgactaat 53
Query: 126 gttttt 131
|||||
Sbjct: 52 tttttt 47
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 71 tatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgtttt 130
||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118 tatttttattgttatgagatgataaaacatgaatagtactttactcgtgacttatgtttt 59
Query: 131 tattgttttt 140
|||| |||||
Sbjct: 58 tatttttttt 49
>RF01062;MIR812;AC092781.6/42664-42837 39947:Oryza sativa Japonica
Group
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 127 atgattagtattttcattgttattagatgataaaatatgaatagtactttatttgtgact 68
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 67 aattttttta 58
>RF01062;MIR812;BX000498.1/119476-119302 4530:Oryza sativa (rice)
Length = 175
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| |||| |||||||||||||| ||||||||| |||||||||
Sbjct: 124 attagtatttttattgttatgagattataaaacatgaatattactttatgcgtgacttat 65
Query: 126 gttttt 131
||||||
Sbjct: 64 gttttt 59
>RF01062;MIR812;AAAA02021196.1/7908-8075 39946:Oryza sativa Indica
Group
Length = 168
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||||| || |||||||||||||| |||||| ||||||||||||||||| |||||||||
Sbjct: 120 attagtagttttattgttattagattataaaatatgaatagtactttatgcgtgacttat 61
Query: 126 gttttt 131
||||||
Sbjct: 60 gttttt 55
>RF01062;MIR812;AP004048.3/68482-68314 39947:Oryza sativa Japonica
Group
Length = 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 68 tagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgt 127
|||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 119 tagtatttttattgttatgagatgataaaacatgaataggactttatgcgtgacttatgt 60
Query: 128 tt 129
||
Sbjct: 59 tt 58
>RF01062;MIR812;AP008212.1/29057626-29057461 39947:Oryza sativa
Japonica Group
Length = 166
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtg 119
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 117 attagtatttttattgttattagatgataaaatatgaatagtactttatgtgtg 64
>RF01062;MIR812;AACV01018142.1/4485-4653 39947:Oryza sativa Japonica
Group
Length = 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactt 123
|||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 119 attagtatttttattgttattagatgataaaatatgaatagtactttatctgtgactt 62
>RF01062;MIR812;AACV01009205.1/1370-1202 39947:Oryza sativa Japonica
Group
Length = 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 124 atgattaatatttttattgttattagattataaaacacaaatagtactttatgtgtgact 65
Query: 123 tatgtt 128
||||||
Sbjct: 64 tatgtt 59
>RF01062;MIR812;AP008210.1/22155975-22155804 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaatatgaatagtgttttatgtgtgact 67
Query: 123 ta 124
||
Sbjct: 66 ta 65
>RF01062;MIR812;AACV01008240.1/555-385 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 98/115 (85%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 19 tttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtatttct 77
|||||||| |||| ||| ||||| |||||||||||||| ||||||||||||| |
Sbjct: 170 tttccgtgtccaattttgatcgtccgtcttatttgaaatttttttatgattagtattttt 111
Query: 78 attgttattagatgataaaa-catgaatagtactttatgtgtgacttatgttttt 131
||||||||||||| | |||| ||| |||||||||||||||||||||| |||||||
Sbjct: 110 attgttattagattaaaaaaacataaatagtactttatgtgtgacttgtgttttt 56
>RF01062;MIR812;AACV01013958.1/11174-11347 39947:Oryza sativa
Japonica Group
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 125 gattagtatttttattgttattaaatgataaaacatgaatagtattttatgtgtgact 68
>RF01062;MIR812;AP008214.1/14414734-14414905 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||
Sbjct: 124 attagtatttttattgtcatgagatgataaaacatgaatagtactttatacgtgacttat 65
Query: 126 gttttt 131
||||||
Sbjct: 64 gttttt 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaa 185
||||||||| ||||| | |||||||||||||||||||
Sbjct: 135 ttcaaataagacagatggtcaaagttgggcacggaaa 171
>RF01062;MIR812;AP008208.1/8778017-8778189 39947:Oryza sativa
Japonica Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaacatgaatagtattttatatatgact 67
Query: 123 tatgtttttattgttttt 140
|| ||||| || |||||
Sbjct: 66 aatattttttttattttt 49
>RF01062;MIR812;ABRL01001420.1/1095-922 65489:Oryza barthii
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 atgattactatttttattgctattagatgataaaatatgaatagtactttatgtgtgact 67
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 66 aattttttta 57
>RF01062;MIR812;AP004049.2/109707-109869 39947:Oryza sativa Japonica
Group
Length = 163
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 141 cgttcgtcttatttgaaaaaagtttatgattagtatttttgttgttattagatgataaaa 82
Query: 98 catgaatagtactttatgtgtgacttatgttttta 132
|| ||||||||||||||| ||||| || ||||||
Sbjct: 81 tataaatagtactttatgtatgactaattttttta 47
>RF01062;MIR812;AP008212.1/24528949-24528779 39947:Oryza sativa
Japonica Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 125 atgattagtatttttattgttattagattacaaaacatgaatagtactttatgcgtgact 66
Query: 123 tatgtttttattgttttt 140
|||| ||| | ||||||
Sbjct: 65 aatgtctttttagttttt 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaa 185
||||||||| | |||||||||||||||| ||||||||
Sbjct: 134 ttcaaataaaatagacgatcaaagttggacacggaaa 170
>RF01062;MIR812;AP008216.1/1661314-1661486 39947:Oryza sativa
Japonica Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaatatgaatagtactttatgcatgact 67
Query: 123 ta 124
||
Sbjct: 66 ta 65
>RF01062;MIR812;AAAA02028052.1/7218-7389 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123 gattactatttttattgttattagatgataaaacatgaataatactttatgtgtgact 66
>RF01062;MIR812;AACV01008082.1/25543-25371 39947:Oryza sativa
Japonica Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct: 123 attagtatttttattgttattagatgataaaacatgaatagtactttatatgggactaat 64
Query: 126 gttttt 131
|||||
Sbjct: 63 tttttt 58
>RF01062;MIR812;AP005647.3/68598-68772 39947:Oryza sativa Japonica
Group
Length = 175
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 126 gattaatatttttattgttattagatgataaaacatgaatagtactctatgtgtgact 69
>RF01062;MIR812;AP008209.1/687985-688157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 65 gattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 124 gattaatatttttattgttactagatgataaaacatgaatagtactttatgtgtgact 67
>RF01062;MIR812;AAAA02006548.1/2919-2757 39946:Oryza sativa Indica
Group
Length = 163
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||| ||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 121 attattatttttattgttattagatgataaaacatgaataatattttatatgtgacttat 62
Query: 126 gtttttattgtttt 139
|||||||| ||||
Sbjct: 61 ttttttattttttt 48
>RF01062;MIR812;AL662987.3/136857-136685 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaatatgaatagtactttatgcgtga 69
>RF01062;MIR812;AAAA02024783.1/5623-5452 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||
Sbjct: 124 attagtatttttattgtcatgagatgataaaacatgaatagtactttatacgtgacttat 65
Query: 126 gttttt 131
||||||
Sbjct: 64 gttttt 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaa 185
||||||||| ||||| | |||||||||||||||||||
Sbjct: 135 ttcaaataagacagatggtcaaagttgggcacggaaa 171
>RF01062;MIR812;AACV01020478.1/2846-3015 39947:Oryza sativa Japonica
Group
Length = 170
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 123 attagtatttttattgttatgagatgataaaatatgaatagtactttacatgtgacttat 64
Query: 126 gttttt 131
||||||
Sbjct: 63 gttttt 58
>RF01062;MIR812;AAAA02027206.1/50950-51120 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 39 gttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaac 98
||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||
Sbjct: 148 gttcgtcttatttgaaaaacaattatgattagtatttttattgttgttagatgataatac 89
Query: 99 atgaatagtactttatgtg 117
|||||||||||||||||||
Sbjct: 88 atgaatagtactttatgtg 70
>RF01062;MIR812;EU868999.1/178-351 39946:Oryza sativa Indica Group
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 127 atgattagtatttttattgttattagatgataaatcataaatagtattttatgtgtgact 68
Query: 123 tatgttttta 132
|| ||||||
Sbjct: 67 aatattttta 58
>RF01062;MIR812;AACV01004704.1/18959-18788 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 122 attagtatttttattgttgttagatgataaaacatgaatagtactttatgtatgactaat 63
Query: 126 gttttt 131
|||||
Sbjct: 62 tttttt 57
>RF01062;MIR812;AAAA02028934.1/4394-4222 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 125 atgattagtatgtttattgttattagatgataaaatatgaatagtattttatgtgtgact 66
Query: 123 t 123
|
Sbjct: 65 t 65
>RF01062;MIR812;AAAA02030087.1/8995-9151 39946:Oryza sativa Indica
Group
Length = 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 110 attagtatttttgttgttatgagatgataaaacatgaataatactttatgcgtgacttat 51
Query: 126 gtttt 130
|||||
Sbjct: 50 gtttt 46
>RF01062;MIR812;AAAA02030424.1/11892-11719 39946:Oryza sativa Indica
Group
Length = 174
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 124 attagtatttttattattattagatgataaaacatgaatagtactttatgtgcgact 68
>RF01062;MIR812;AAAA02021172.1/33122-33292 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 121 attagtatttttattgttattagatgataaaacatgagtagtattttatgtgtgact 65
>RF01062;MIR812;BX842608.1/118530-118360 39947:Oryza sativa Japonica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 122 atgattaatatttttattgttactagatgataaaacatgaatagtactttatctgtgact 63
Query: 123 tatgtttttattgtttt 139
|| ||| |||| ||||
Sbjct: 62 aatttttctattttttt 46
>RF01062;MIR812;AAAA02022062.1/20842-21015 39946:Oryza sativa Indica
Group
Length = 174
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||| |||||||||| ||||||||||||| |||||||||| ||||||
Sbjct: 128 atgattagtatttttatcgttattagattataaaacatgaattgtactttatgcgtgact 69
Query: 123 tatgttttt 131
||| |||||
Sbjct: 68 tatattttt 60
>RF01062;MIR812;AP008215.1/19973259-19973086 39947:Oryza sativa
Japonica Group
Length = 174
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 128 atgattaatatttttattgttattaaatgataaaacatgaatagtacttgatgtgtgact 69
Query: 123 tatgttttt 131
|| |||||
Sbjct: 68 aattttttt 60
>RF01062;MIR812;AAAA02006757.1/42423-42257 39946:Oryza sativa Indica
Group
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| |||||||||||||| ||||||||||||| |||||||| | ||||||
Sbjct: 122 atgattagtatttttattgttattagattataaaacatgaatggtactttaagcgtgact 63
Query: 123 tatgttttt 131
|| ||||||
Sbjct: 62 taagttttt 54
>RF01062;MIR812;AP008208.1/30108756-30108928 39947:Oryza sativa
Japonica Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 127 atgattagtatttttattgctattagataataaaacatgaatagtactttatatgtgact 68
Query: 123 tatgttttt 131
|| |||||
Sbjct: 67 aattttttt 59
>RF01062;MIR812;AP008207.1/7412250-7412091 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
||||| |||||||||||||| || |||||||||| ||||||||| |||||||||
Sbjct: 141 atcgtccgtcttatttgaaaactttttataattagtatttttattgttatgagatgataa 82
Query: 96 aacatgaatagtactttatgtgtgacttat 125
||| | ||||||||||||||||||||||||
Sbjct: 81 aacgtaaatagtactttatgtgtgacttat 52
>RF01062;MIR812;AAAA02021455.1/3006-2836 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 126 atgattaatattt-tattattattagatgataaaacataaataatactttatgtgtgact 68
Query: 123 tatgttttt 131
|||||||||
Sbjct: 67 tatgttttt 59
>RF01062;MIR812;AACV01011622.1/26944-27115 39947:Oryza sativa
Japonica Group
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 38 cgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaa 97
|||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||
Sbjct: 150 cgttcgtcttatttgaaattttttcatgattagtgtttttattgttattacatgataaaa 91
Query: 98 catgaatagtactttatgtgtgactt 123
||||||||||||||||| | ||||||
Sbjct: 90 catgaatagtactttatatatgactt 65
>RF01062;MIR812;AP008208.1/34975479-34975627 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
|||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 99 attactatttttattgttattagatgataaaatatgaatagtactttatgtgtgact 43
>RF01062;MIR812;AP008216.1/3917246-3917079 39947:Oryza sativa
Japonica Group
Length = 168
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| | |||||||||||| |||||||||||||| || ||||||| |||||
Sbjct: 122 atgattagtatttttgttgttattagattataaaacatgaatattattttatgtttgact 63
Query: 123 tatgttttt 131
|||||||||
Sbjct: 62 tatgttttt 54
>RF01062;MIR812;AP004048.3/42552-42381 39947:Oryza sativa Japonica
Group
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 136/169 (80%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 18 gtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnnatgattagtatttc 76
||||||||| |||||||| |||| |||||||||||||| || ||||||||||
Sbjct: 172 gtttccgtgttcaactttagtcgtccgtcttatttgaaaattttttataattagtatttt 113
Query: 77 tattgttattagatgataaaacatgaatagtactttatgtgtgactta--tgtttttatt 134
| ||||||| ||||||||||| ||||| || ||||||||||||||||| |||||| |||
Sbjct: 112 tgttgttatgagatgataaaatatgaacagcactttatgtgtgacttatgtgttttaatt 53
Query: 135 gtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcacgga 183
|| || ||||||||| || ||||||||||||||||||||||
Sbjct: 52 tttcttaaataaatttcaaataagacggacgatcaaagttgggcacgga 4
Score = 48.1 bits (24), Expect = 5e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 21 tccgtgcccaacttt-atcgttcgtcttatttgaaa 55
||||||||||||||| ||||| ||||||||||||||
Sbjct: 4 tccgtgcccaactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| | ||||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 122 attagtatttttgttgttatgagatgataaaatatgaatagtactttacttgtgacttat 63
Query: 126 gtttttatt 134
|||||||||
Sbjct: 62 gtttttatt 54
>RF01062;MIR812;AC133334.8/22904-23076 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 41 tcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataaaacat 100
||||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct: 148 tcgtcttatttgaaatttttctatgattagtatttttattgttagtagatgataaaacat 89
Query: 101 gaatagtactttatgtgtgact 122
||||||| |||||||||||||
Sbjct: 88 aaatagtattttatgtgtgact 67
>RF01062;MIR812;AACV01017783.1/7804-7972 39947:Oryza sativa Japonica
Group
Length = 169
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||| |||| |||||||||||||||| | |||
Sbjct: 124 atgattagtatttttattgttattagatgatgaaacgtgaatagtactttatgcatcact 65
Query: 123 tatgttttt 131
|||||||||
Sbjct: 64 tatgttttt 56
