miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;ABXC01000758.1/126828-126715 4558:Sorghum bicolor
           (sorghum)
          Length = 114

 Score =  214 bits (108), Expect = 2e-55
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtggaatgttgtctggttctaggcctctctctacatgcaagcatggatgtagtagcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tgtggaatgttgtctggttctaggcctctctctacatgcaagcatggatgtagtagcagc 64

                                                           
Query: 61  ctactgcaattgcttgctgggacctcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  ctactgcaattgcttgctgggacctcggaccaggcttcattcccctca 112




>RF00075;mir-166;AAAA02030332.1/11899-12019 39946:Oryza sativa
           Indica Group
          Length = 121

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 78  tgggacctcggaccaggcttcattcccctca 108
           ||||| |||||||||||||||||||||||||
Sbjct: 89  tgggatctcggaccaggcttcattcccctca 119




>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
          Length = 88

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 83  cctcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||||
Sbjct: 61  cctcggaccaggcttcattcccctca 86




>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
          Length = 94

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 83  cctcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||||
Sbjct: 67  cctcggaccaggcttcattcccctca 92




>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
          Length = 150

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 83  cctcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||||
Sbjct: 123 cctcggaccaggcttcattcccctca 148




>RF00075;mir-166;ABEU01001509.1/37358-37431 145481:Physcomitrella
           patens subsp. patens
          Length = 74

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 83  cctcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||||
Sbjct: 47  cctcggaccaggcttcattcccctca 72




>RF00075;mir-166;ABIM01012777.1/4514-4390 3649:Carica papaya
           (papaya)
          Length = 125

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 99  ctcggaccaggcttcattcccctca 123




>RF00075;mir-166;EU548914.1/298-397 3702:Arabidopsis thaliana (thale
           cress)
          Length = 100

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 74  ctcggaccaggcttcattcccctca 98




>RF00075;mir-166;AARH01009662.1/134102-134198 3694:Populus
           trichocarpa
          Length = 97

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 71  ctcggaccaggcttcattcccctca 95




>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
          Length = 157

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 131 ctcggaccaggcttcattcccctca 155




>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
          Length = 119

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 93  ctcggaccaggcttcattcccctca 117




>RF00075;mir-166;EU945393.1/89-202 4577:Zea mays
          Length = 114

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 88  ctcggaccaggcttcattcccctca 112




>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
          Length = 97

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 71  ctcggaccaggcttcattcccctca 95




>RF00075;mir-166;AY501432.1/1-122 4577:Zea mays
          Length = 122

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 98  ctcggaccaggcttcattcccctca 122




>RF00075;mir-166;ABXC01000193.1/181030-180913 4558:Sorghum bicolor
           (sorghum)
          Length = 118

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 92  ctcggaccaggcttcattcccctca 116




>RF00075;mir-166;ABXC01000331.1/255164-255261 4558:Sorghum bicolor
           (sorghum)
          Length = 98

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 72  ctcggaccaggcttcattcccctca 96




>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
           (sorghum)
          Length = 97

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 71  ctcggaccaggcttcattcccctca 95




>RF00075;mir-166;AC027660.2/136704-136618 39947:Oryza sativa
           Japonica Group
          Length = 87

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 61  ctcggaccaggcttcattcccctca 85




>RF00075;mir-166;AAAA02029560.1/62131-62045 39946:Oryza sativa
           Indica Group
          Length = 87

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 61  ctcggaccaggcttcattcccctca 85




>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
           Japonica Group
          Length = 103

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  ctcggaccaggcttcattcccctca 108
           |||||||||||||||||||||||||
Sbjct: 77  ctcggaccaggcttcattcccctca 101




>RF00075;mir-166;ABIM01027778.1/12902-13001 3649:Carica papaya
           (papaya)
          Length = 100

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 75  tcggaccaggcttcattcccctca 98




>RF00075;mir-166;AC232546.1/61469-61348 51351:Brassica rapa subsp.
           pekinensis
          Length = 122

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 97  tcggaccaggcttcattcccctca 120




>RF00075;mir-166;AC189591.2/50508-50400 51351:Brassica rapa subsp.
           pekinensis
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 84  tcggaccaggcttcattcccctca 107




>RF00075;mir-166;EU548911.1/166-263 3702:Arabidopsis thaliana (thale
           cress)
          Length = 98

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 73  tcggaccaggcttcattcccctca 96




>RF00075;mir-166;AB016871.1/77005-76861 3702:Arabidopsis thaliana
           (thale cress)
          Length = 145

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 120 tcggaccaggcttcattcccctca 143




>RF00075;mir-166;EU548905.1/187-287 3702:Arabidopsis thaliana (thale
           cress)
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 76  tcggaccaggcttcattcccctca 99




>RF00075;mir-166;AC216447.1/33512-33607 3694:Populus trichocarpa
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 71  tcggaccaggcttcattcccctca 94




>RF00075;mir-166;AASG02003407.1/927-777 3988:Ricinus communis
           (castor bean)
          Length = 151

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  cctcggaccaggcttcattcccct 106
           ||||||||||||||||||||||||
Sbjct: 124 cctcggaccaggcttcattcccct 147




>RF00075;mir-166;AC140029.19/70272-70377 3880:Medicago truncatula
           (barrel medic)
          Length = 106

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 81  tcggaccaggcttcattcccctca 104




>RF00075;mir-166;CU302248.6/62232-62044 3880:Medicago truncatula
           (barrel medic)
          Length = 189

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 164 tcggaccaggcttcattcccctca 187




>RF00075;mir-166;BABK01014008.1/1570-1448 34305:Lotus japonicus
          Length = 123

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 98  tcggaccaggcttcattcccctca 121




>RF00075;mir-166;BABK01039514.1/607-703 34305:Lotus japonicus
          Length = 97

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 72  tcggaccaggcttcattcccctca 95




>RF00075;mir-166;CAAP02000553.1/130979-130890 29760:Vitis vinifera
          Length = 90

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 65  tcggaccaggcttcattcccctca 88




>RF00075;mir-166;CAAP02001545.1/66166-66077 29760:Vitis vinifera
          Length = 90

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 65  tcggaccaggcttcattcccctca 88




>RF00075;mir-166;AAAA02025700.1/14722-14582 39946:Oryza sativa
           Indica Group
          Length = 141

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  gacctcggaccaggcttcattccc 104
           ||||||||||||||||||||||||
Sbjct: 112 gacctcggaccaggcttcattccc 135




>RF00075;mir-166;AACV01018689.1/7378-7519 39947:Oryza sativa
           Japonica Group
          Length = 142

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  gacctcggaccaggcttcattccc 104
           ||||||||||||||||||||||||
Sbjct: 113 gacctcggaccaggcttcattccc 136




>RF00075;mir-166;ABEU01002487.1/1609-1703 145481:Physcomitrella
           patens subsp. patens
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 70  tcggaccaggcttcattcccctca 93




>RF00075;mir-166;ABEU01002053.1/8010-8104 145481:Physcomitrella
           patens subsp. patens
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 70  tcggaccaggcttcattcccctca 93




>RF00075;mir-166;ABEU01003209.1/178750-178656 145481:Physcomitrella
           patens subsp. patens
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 70  tcggaccaggcttcattcccctca 93




>RF00075;mir-166;ABEU01002839.1/114707-114612 145481:Physcomitrella
           patens subsp. patens
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  tcggaccaggcttcattcccctca 108
           ||||||||||||||||||||||||
Sbjct: 71  tcggaccaggcttcattcccctca 94




>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
          Length = 105

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  cctcggaccaggcttcattcccc 105
           |||||||||||||||||||||||
Sbjct: 78  cctcggaccaggcttcattcccc 100




>RF00075;mir-166;ABEU01001509.1/36651-36730 145481:Physcomitrella
           patens subsp. patens
          Length = 80

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 85  tcggaccaggcttcattcccctc 107
           |||||||||||||||||||||||
Sbjct: 55  tcggaccaggcttcattcccctc 77




>RF00075;mir-166;ABEU01001509.1/36829-36913 145481:Physcomitrella
           patens subsp. patens
          Length = 85

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 85  tcggaccaggcttcattcccctc 107
           |||||||||||||||||||||||
Sbjct: 60  tcggaccaggcttcattcccctc 82




>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
           (papaya)
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 99  ctcggaccaggcttcattcccc 120




>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
           pekinensis
          Length = 87

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 61  ctcggaccaggcttcattcccc 82




>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
           (thale cress)
          Length = 118

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 92  ctcggaccaggcttcattcccc 113




>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
           cress)
          Length = 111

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 85  ctcggaccaggcttcattcccc 106




>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
          Length = 94

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 68  ctcggaccaggcttcattcccc 89




>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 66  ctcggaccaggcttcattcccc 87




>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
           (castor bean)
          Length = 94

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 68  ctcggaccaggcttcattcccc 89




>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
           (barrel medic)
          Length = 107

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 81  ctcggaccaggcttcattcccc 102




>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
           (barrel medic)
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 66  ctcggaccaggcttcattcccc 87




>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
           (barrel medic)
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 78  ctcggaccaggcttcattcccc 99




>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
          Length = 90

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 64  ctcggaccaggcttcattcccc 85




>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 67  ctcggaccaggcttcattcccc 88




>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
          Length = 212

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 188 ctcggaccaggcttcattcccc 209




>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
           (sorghum)
          Length = 191

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 165 ctcggaccaggcttcattcccc 186




>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 160

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 134 ctcggaccaggcttcattcccc 155




>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
           Indica Group
          Length = 180

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 154 ctcggaccaggcttcattcccc 175




>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
           Group
          Length = 179

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  ctcggaccaggcttcattcccc 105
           ||||||||||||||||||||||
Sbjct: 153 ctcggaccaggcttcattcccc 174




>RF00075;mir-166;ABEU01015165.1/9230-9152 145481:Physcomitrella
           patens subsp. patens
          Length = 79

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  tcggaccaggcttcattcccct 106
           ||||||||||||||||||||||
Sbjct: 54  tcggaccaggcttcattcccct 75




>RF00075;mir-166;ABEU01008046.1/36531-36607 145481:Physcomitrella
           patens subsp. patens
          Length = 77

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  tcggaccaggcttcattcccct 106
           ||||||||||||||||||||||
Sbjct: 52  tcggaccaggcttcattcccct 73




>RF00075;mir-166;ABEU01008046.1/36699-36780 145481:Physcomitrella
           patens subsp. patens
          Length = 82

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 86  cggaccaggcttcattcccctc 107
           ||||||||||||||||||||||
Sbjct: 58  cggaccaggcttcattcccctc 79




>RF00075;mir-166;ABEU01005077.1/22634-22717 145481:Physcomitrella
           patens subsp. patens
          Length = 84

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 86  cggaccaggcttcattcccctc 107
           ||||||||||||||||||||||
Sbjct: 60  cggaccaggcttcattcccctc 81