miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00692;MIR171_2;ABXC01000992.1/144178-144070 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 216 bits (109), Expect = 4e-56
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 agaacgagacgacatggcatggtattgacttggctcatctctcatccacagcaaacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaacgagacgacatggcatggtattgacttggctcatctctcatccacagcaaacttca 60
Query: 61 caagtgcctgaggtgagccgagccaatatcacttcatgtcatctagcgt 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagtgcctgaggtgagccgagccaatatcacttcatgtcatctagcgt 109
>RF00692;MIR171_2;AACV01016047.1/2719-2826 39947:Oryza sativa
Japonica Group
Length = 108
Score = 79.8 bits (40), Expect = 7e-15
Identities = 80/91 (87%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 11 gacatggcatggtattgacttggctcatctctcatccacagcaaacttca-caagtgcct 69
||||||||||||||||||||||||||| ||||| | |||||||||| || || ||
Sbjct: 11 gacatggcatggtattgacttggctca--tctcagcaacagcaaactgcatgcagcgctg 68
Query: 70 gaggtgagccgagccaatatcacttcatgtc 100
|||||||||||||||||||||||||||||||
Sbjct: 69 gaggtgagccgagccaatatcacttcatgtc 99
