miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00451;mir-395;ABXC01004559.1/90713-90831 4558:Sorghum bicolor
(sorghum)
Length = 119
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 gttccctgcaaacacttcacaagctagaccatatatagtatgcccttgcacaatgtggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gttccctgcaaacacttcacaagctagaccatatatagtatgcccttgcacaatgtggta 72
Query: 61 tccagttacctagctagtgaagtgtttgggggaactc 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 73 tccagttacctagctagtgaagtgtttgggggaactc 109
>RF00451;mir-395;ABXC01004449.1/8869-8999 4558:Sorghum bicolor
(sorghum)
Length = 131
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tagtgaagtgtttgggggaactc 97
|||||||||||||||||||||||
Sbjct: 99 tagtgaagtgtttgggggaactc 121
>RF00451;mir-395;AP008214.1/3292800-3292911 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tagtgaagtgtttgggggaactc 97
|||||||||||||||||||||||
Sbjct: 80 tagtgaagtgtttgggggaactc 102
>RF00451;mir-395;AP008210.1/32655890-32656029 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tagtgaagtgtttgggggaactc 97
|||||||||||||||||||||||
Sbjct: 108 tagtgaagtgtttgggggaactc 130
