miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;AAAA02017707.1/12909-13018 39946:Oryza sativa
Indica Group
Length = 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 93 ctagcaagccgtgcgtgccaaaggagaattgccc 126
||||| |||| |||||||||||||||||||||||
Sbjct: 65 ctagctagccatgcgtgccaaaggagaattgccc 98
>RF00445;mir-399;ABXC01002232.1/126477-126594 4558:Sorghum bicolor
(sorghum)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 104 tgcgtgccaaaggagaattgccc 126
|||||||||||||||||||||||
Sbjct: 84 tgcgtgccaaaggagaattgccc 106
>RF00445;mir-399;ABXC01006255.1/18853-18743 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 105 gcgtgccaaaggagaattgccc 126
||||||||||||||||||||||
Sbjct: 78 gcgtgccaaaggagaattgccc 99
