miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 188 bits (95), Expect = 3e-47
Identities = 122/131 (93%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatcaagtca 64
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 65 cgttttagtattagatacatccgtatctaggcaaatctaagacaagaattttggaacgga 124
Query: 145 gggagtataag 155
|| ||||||||
Sbjct: 125 ggaagtataag 135
Score = 91.7 bits (46), Expect = 5e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 98 gatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttgggacggagggagta 5
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 161 bits (81), Expect = 7e-39
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
||||||| || ||||||||| | ||| ||||||||| |||||||| | ||||||||| ||
Sbjct: 4 atactccttctgtcccaaaattcttgtcttagatttttctaaatagggatgtatcaactc 63
Query: 84 atgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 64 acgttttagtattagatacatccatatctagacaaatctaagacaagaattttgggacgg 123
Query: 144 agggagtat 152
|||||||||
Sbjct: 124 agggagtat 132
Score = 67.9 bits (34), Expect = 8e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 21 taaatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatc 78
||||||||||||||||||||||| | ||| |||||||||||||| ||| | |||||||
Sbjct: 135 taaatactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatc 78
Score = 61.9 bits (31), Expect = 5e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 98 gatacatccgtatctagactaatctaagacaagaattttgggacggagggagtat 152
||||||||| ||| |||| |||||||||||||||||||||||| || |||||||
Sbjct: 58 gatacatccctatttagaaaaatctaagacaagaattttgggacagaaggagtat 4
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 159 bits (80), Expect = 3e-38
Identities = 118/131 (90%)
Strand = Plus / Plus
Query: 22 aaatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaag 81
|||||||||||||||||||||| | ||| | |||||||||||||||||| ||||||| ||
Sbjct: 2 aaatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctag 61
Query: 82 tcatgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggac 141
|||||||||||| ||||| |||| | |||||| || |||||||||| |||||||||||||
Sbjct: 62 tcatgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggac 121
Query: 142 ggagggagtat 152
|||||||||||
Sbjct: 122 ggagggagtat 132
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtat 152
||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 60 tagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagtat 4
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 159 bits (80), Expect = 3e-38
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
|||||||||||||||||||| | || |||||||||||||| |||||||| |||||||
Sbjct: 147 tataagtctttttagagatttgaatatggactacatacggatgaatatagacgtatttta 88
Query: 210 gagtgtagattcactcattttacttcgtatgtagtccatagtggaatctctaagaaggca 269
||||||||||||||||||||| || ||||||||||||||| | |||||||||| ||| |
Sbjct: 87 gagtgtagattcactcattttgctccgtatgtagtccatattagaatctctaaaaagact 28
Query: 270 tatatttaggaacagagggtgtac 293
||||||||||||||||||| ||||
Sbjct: 27 tatatttaggaacagagggagtac 4
Score = 52.0 bits (26), Expect = 5e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 235 cgtatgtagtccatagtggaatctctaagaaggcatatatttaggaacagaggg 288
||||||||||||||| | ||||||||| ||| | ||||||||||||| |||||
Sbjct: 109 cgtatgtagtccatattcaaatctctaaaaagacttatatttaggaacggaggg 162
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 agtactccctctgttcctaaata 26
|||||||||||||||||||||||
Sbjct: 3 agtactccctctgttcctaaata 25
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 151 bits (76), Expect = 7e-36
Identities = 115/128 (89%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
|||||||||| |||||||| | ||| |||||||||||||||||||| |||||| ||||||
Sbjct: 131 tactccctccatcccaaaattcttgtcttagatttgtctaaatacggatgtatgaagtca 72
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
| ||||||||||| |||||| |||||||||| ||| |||||||||||||||| ||||||
Sbjct: 71 tattttagtattaaatacatatgtatctagacaaatgtaagacaagaattttgagacgga 12
Query: 145 gggagtat 152
||||||||
Sbjct: 11 gggagtat 4
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 99 atacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
|||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 79 atacatccgtatttagacaaatctaagacaagaattttgggatggagggagta 131
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 149 bits (75), Expect = 3e-35
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||| ||||||||| | ||| |||||||||||||| ||||| |||||||||||||
Sbjct: 5 tactccctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatcaagtca 64
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
|||| |||||||||||||| |||||||||| ||||||||||||||| |||||||| ||
Sbjct: 65 cattttcgtattagatacatctgtatctagacaaatctaagacaagaaatttgggacaga 124
Query: 145 gggagta 151
|||||||
Sbjct: 125 gggagta 131
Score = 91.7 bits (46), Expect = 5e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 98 gatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 58 gatacatccgtatctagacaaatctaagacaagaattttgggaccgagggagta 5
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 133 bits (67), Expect = 2e-30
Identities = 112/127 (88%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||| |||||||| ||| | ||| |||| ||||||||||| ||| |||||||||||||
Sbjct: 5 tactcgctccgtcctgaaattcttgtcttaaatttgtctaaagacgaatgtatcaagtca 64
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 65 cgtttttgtattagatacatccgtatctagacaaagctacaacaagaattttgggacgga 124
Query: 145 gggagta 151
|||||||
Sbjct: 125 gggagta 131
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 123 bits (62), Expect = 2e-27
Identities = 106/118 (89%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 35 gtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtcatgttttagta 94
||||||||| | ||| |||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 15 gtcccaaaattcttgtcttagatttgtctaaatatgaatgtatctagtcatgttttagta 74
Query: 95 -ttagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
|||||||||||| | ||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 75 tttagatacatccatttctagac-aatttaagacaagaattttgggacggagagagta 131
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggac 141
||||||||| | ||| ||||| ||||||||||||||||||||||||
Sbjct: 60 tagatacattcatatttagacaaatctaagacaagaattttgggac 15
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 119 bits (60), Expect = 2e-26
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||||||||| | ||| |||| ||||||||||||| | |||||| ||| |
Sbjct: 5 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 64
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
||||||| ||||||||||||||||||| || ||| ||||||||||||||||||| |||
Sbjct: 65 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 124
Query: 145 ggga 148
||||
Sbjct: 125 ggga 128
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 99 atacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
|||||||| ||| ||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 57 atacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 2e-26
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
|||||| | ||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 20 tataagaccttttagagattgtactataaactacatacggatgtacatagacatatttta 79
Query: 210 gagtgtagattcactcattttacttcgtatgtagtc 245
|||| |||||||||||||||| || |||||||||||
Sbjct: 80 gagtatagattcactcattttgctccgtatgtagtc 115
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 113 bits (57), Expect = 1e-24
Identities = 122/141 (86%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaa-actacatacggatgtatatagacatatttt 208
||||||||||||||||| || ||||| | ||||||| ||||||||||||||||||||||
Sbjct: 20 tataagtctttttagaggtttcactagtagactacattcggatgtatatagacatatttt 79
Query: 209 agagtgtagattcactcattttacttcgtatgtagtc-catagtggaatctctaagaagg 267
||| | |||||||||||||||| || ||||||||||| ||| | ||||||||| |||
Sbjct: 80 agaatatagattcactcattttgctccgtatgtagtcgtctagcgaaatctctaaaaaga 139
Query: 268 catatatttaggaacagaggg 288
| ||||||||||||| |||||
Sbjct: 140 cttatatttaggaacggaggg 160
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 111 bits (56), Expect = 6e-24
Identities = 104/120 (86%)
Strand = Plus / Minus
Query: 29 ccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtcatgtt 88
||||||||||||||| | ||| |||| ||||||||||||||| ||||||| ||| | ||
Sbjct: 127 ccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagttacatt 68
Query: 89 ttagtattagatacatccgtatctagactaatctaagacaagaattttgggacggaggga 148
||||| ||||||||||| |||||| || ||| ||||||||||||||||||| |||||||
Sbjct: 67 ttagtgttagatacatctttatctaaacaaatgtaagacaagaattttgggatggaggga 8
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggaggg 147
||||||||||||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 111 bits (56), Expect = 6e-24
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
|||||| | ||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 23 tataagaccttttagagattgtactataaactacatacggatgtacatagacatatttta 82
Query: 210 gagtgtagattcactcattttacttcgtatgtagtc 245
|||| ||||||| |||||||| || |||||||||||
Sbjct: 83 gagtatagattcgctcattttgctccgtatgtagtc 118
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 111 bits (56), Expect = 6e-24
Identities = 110/128 (85%)
Strand = Plus / Plus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
||||||||||| || ||||| | | | |||| |||| |||||||| | ||||||| ||||
Sbjct: 4 atactccctccatctcaaaattctggtcttaaatttctctaaatatggatgtatctagtc 63
Query: 84 atgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 64 acgttttagtgttagatacatccgtatctagataaatcctagacaagaattttgggacgg 123
Query: 144 agggagta 151
||| ||||
Sbjct: 124 aggtagta 131
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtataa 154
||||||||||| ||| |||| ||| |||||| ||||||||| || |||||||||||||
Sbjct: 60 tagatacatccatatttagagaaatttaagaccagaattttgagatggagggagtataa 2
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 111 bits (56), Expect = 6e-24
Identities = 122/144 (84%), Gaps = 5/144 (3%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
||||||||||| |||||||||||||| || ||||| ||||||||| ||||||
Sbjct: 24 tataagtctttgtagagattccactatggaccacata-----gtatatagatgcatttta 78
Query: 210 gagtgtagattcactcattttacttcgtatgtagtccatagtggaatctctaagaaggca 269
||||||||||||||||||||| ||||||||||||||||||||| |||||||| || |
Sbjct: 79 gagtgtagattcactcattttgcttcgtatgtagtccatagtgaaatctctacagagact 138
Query: 270 tatatttaggaacagagggtgtac 293
||||||||||||| ||||| ||||
Sbjct: 139 tatatttaggaacggagggagtac 162
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 237 tatgtagtccatagtggaatctctaagaaggcatatatttaggaacagaggg 288
||||| ||||||||||||||||||| ||| | ||||||||||||| |||||
Sbjct: 60 tatgtggtccatagtggaatctctacaaagacttatatttaggaacggaggg 9
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 107 bits (54), Expect = 9e-23
Identities = 112/130 (86%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
||||||||||||| |||||| | ||| ||||||||||| || ||| | ||||||| |||
Sbjct: 4 atactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtt 63
Query: 84 atgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttgggacg 142
| ||||||||||| ||||||||| | ||||||| || |||||||||||||||| |||||
Sbjct: 64 aagttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacg 123
Query: 143 gagggagtat 152
||||||||||
Sbjct: 124 gagggagtat 133
Score = 77.8 bits (39), Expect = 8e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtataa 154
||||||||| | |||||| || ||||||||||||||||||||| |||||||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaagaattttggaacggagggagtataa 2
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 22 aaatactccctccgtcccaaaaattttggcttagatttgtcta 64
||||||||||||||||| |||| | ||| ||||| ||||||||
Sbjct: 135 aaatactccctccgtcctaaaattcttgtcttagctttgtcta 93
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 105 bits (53), Expect = 4e-22
Identities = 111/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
|||||| |||||||||||| | ||| |||| ||||||||| ||| | ||||||| |||||
Sbjct: 5 tactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatctagtca 64
Query: 85 tgttttagta-ttagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
|| ||||||| |||||||||||| | | ||||| | |||||||||||||||||| ||||
Sbjct: 65 tggtttagtatttagatacatccatgtgtagacaatgctaagacaagaattttggaacgg 124
Query: 144 agggagtat 152
|||||||||
Sbjct: 125 agggagtat 133
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||| | ||| ||||| ||| ||||||||||||||||||||||| ||||||
Sbjct: 60 tagatacattcatatatagacaaatttaagacaagaattttgggacggaaggagta 5
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 105 bits (53), Expect = 4e-22
Identities = 111/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||||||||| | ||| ||||||||||| || ||| | ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaattattgtcttagatttgtttagatatgaatgtatctagtca 64
Query: 85 tgttttagt-attagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
|||||||| |||||||||||| | |||| || || |||||||||||||||||||||
Sbjct: 65 agttttagtaattagatacatctatttctaaacaaagttaagacaagaattttgggacga 124
Query: 144 agggagtat 152
|||||||||
Sbjct: 125 agggagtat 133
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||| | |||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 103 bits (52), Expect = 1e-21
Identities = 110/128 (85%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||||||||| | ||| |||| ||||||||| ||| | ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatctagtca 64
Query: 85 tgttttagta-ttagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
||||||||| || |||||||| | |||| || || ||||||||||||||||||||||
Sbjct: 65 cgttttagtattttgatacatctatttctaaacaaacttaagacaagaattttgggacgg 124
Query: 144 agggagta 151
||||||||
Sbjct: 125 agggagta 132
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||| | ||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 60 tagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagta 5
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 101 bits (51), Expect = 6e-21
Identities = 117/139 (84%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
|||||| | |||||||||| ||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 21 tataagaccttttagagatctcactataaactacatacggatgtatgtagtcatattttg 80
Query: 210 gagtgtagattcactcattttacttcgtatgtagtccatagtggaatctctaagaaggca 269
| |||| ||||||||||||| || ||||||||||| |||||| ||| | ||| | | |
Sbjct: 81 ggatgtaaattcactcattttgctccgtatgtagtctatagtgaaatttgtaaaaggtct 140
Query: 270 tatatttaggaacagaggg 288
||||||||||||| |||||
Sbjct: 141 tatatttaggaacggaggg 159
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 99.6 bits (50), Expect = 2e-20
Identities = 111/130 (85%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
||||| ||||||| |||||| | ||| ||||||||||| || ||| | ||||||| |||
Sbjct: 133 atactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtt 74
Query: 84 atgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttgggacg 142
| ||||||||||| ||||||||| | ||||||| || |||||||||||||||| |||||
Sbjct: 73 aagttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacg 14
Query: 143 gagggagtat 152
||||||||||
Sbjct: 13 gagggagtat 4
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtataa 154
||||||||| | |||||| || ||||||||||||||||||||| ||||||| |||||||
Sbjct: 77 tagatacattcatatctaaacaaatctaagacaagaattttggaacggaggtagtataa 135
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 22 aaatactccctccgtcccaaaaattttggcttagatttgtcta 64
||||||||||||||||| |||| | ||| ||||| ||||||||
Sbjct: 2 aaatactccctccgtcctaaaattcttgtcttagctttgtcta 44
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 93.7 bits (47), Expect = 1e-18
Identities = 116/139 (83%)
Strand = Plus / Minus
Query: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209
||||||||||| |||||||| ||||| || |||||||||||||| |||| ||||||
Sbjct: 144 tataagtctttgtagagatttcactatggaccacatacggatgtatgtagatgcatttta 85
Query: 210 gagtgtagattcactcattttacttcgtatgtagtccatagtggaatctctaagaaggca 269
|||| ||| ||||||||||||||| ||||||| ||||||| || ||||| | ||| |
Sbjct: 84 gagtataggttcactcattttactccgtatgtggtccataatgaaatctgtccaaagact 25
Query: 270 tatatttaggaacagaggg 288
||||||||||||| |||||
Sbjct: 24 tatatttaggaacggaggg 6
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 235 cgtatgtagtccatagtggaatctctaagaaggcatatatttaggaa 281
||||||| |||||||||| |||||||| ||| | ||||||||||||
Sbjct: 106 cgtatgtggtccatagtgaaatctctacaaagacttatatttaggaa 152
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 93.7 bits (47), Expect = 1e-18
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 150 tataagtctttttagagattccactacaa-actacatacggatgtatatagacatatttt 208
||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 145 tataagtctttgtagagatttcactaatggactacatacggatgtatatagacatacttt 86
Query: 209 agagtgtagattcactcattttacttcgtatgtag 243
|||||||| ||||| ||||||| || |||||||||
Sbjct: 85 agagtgtacattcaatcattttgctccgtatgtag 51
Score = 46.1 bits (23), Expect = 3e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 235 cgtatgtagtccat-agtggaatctctaagaaggcatatatttaggaacagaggg 288
|||||||||||||| |||| |||||||| ||| | ||||||||||||| |||||
Sbjct: 106 cgtatgtagtccattagtgaaatctctacaaagacttatatttaggaacggaggg 160
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 216 agattcactcattttacttcgtatgtagtccatagtggaatctctaagaaggcatatatt 275
||||||||||||||| || |||||||||||||||||| ||||||||| ||| | ||||||
Sbjct: 81 agattcactcattttgctccgtatgtagtccatagtgtaatctctaaaaagacttatatt 22
Query: 276 taggaacagaggg 288
||||||| |||||
Sbjct: 21 taggaacggaggg 9
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 150 tataagtctttttagagattccactacaaactacatacgga 190
|||||||||||||||||||| ||||| ||||||||||||
Sbjct: 24 tataagtctttttagagattacactatggactacatacgga 64
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 89.7 bits (45), Expect = 2e-17
Identities = 117/140 (83%), Gaps = 7/140 (5%)
Strand = Plus / Plus
Query: 23 aatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagt 82
|||||||||||||||||||| | ||| |||||||||||||| ||| | |||||| |||
Sbjct: 3 aatactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtatgtagt 62
Query: 83 catgttttagtatt-agataca------tccgtatctagactaatctaagacaagaattt 135
|| ||||| ||||| ||||||| ||| | | ||||| || |||||||||||||||
Sbjct: 63 cacgttttggtatttagatacacctacatccatttatagacaaacctaagacaagaattt 122
Query: 136 tgggacggagggagtataag 155
||||||||||||||||||||
Sbjct: 123 tgggacggagggagtataag 142
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 99 atacatccgtatctagactaatctaagacaagaattttgggacggagggagtat 152
|||||| | ||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttgggacggagggagtat 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtcta 64
|||||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 139 atactccctccgtcccaaaattcttgtcttaggtttgtcta 99
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 85.7 bits (43), Expect = 3e-16
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 178 aactacatacggatgtatatagacatattttagagtgtagattcactcattttacttcgt 237
||||||||||||||||||||||||||||||||| || ||| || | | |||| | |||
Sbjct: 119 aactacatacggatgtatatagacatattttagggtataggtttatttgttttgttccgt 60
Query: 238 atgtagtccatagtggaatctctaagaaggcatatatttaggaacagaggg 288
|||||||||||||| |||| ||||| | | | ||||||||||||| |||||
Sbjct: 59 atgtagtccatagtagaatttctaaaaggtcttatatttaggaacggaggg 9
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 81.8 bits (41), Expect = 5e-15
Identities = 109/129 (84%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||| ||||| | ||| |||| |||||| || ||||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaattcttgccttatatttgtttagatacgaatgtatctagtca 64
Query: 85 tgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttgggacgg 143
||| |||||| |||||||||| ||||||| || |||||||||||||||||| | ||
Sbjct: 65 aattt-agtatttagatacatccagttctagacaaagctaagacaagaattttggaatgg 123
Query: 144 agggagtat 152
|||||||||
Sbjct: 124 agggagtat 132
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||| |||||||| || ||| |||| ||||||||||| |||||||||||||
Sbjct: 60 tagatacattcgtatctaaacaaatataaggcaagaattttgagacggagggagta 5
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 77.8 bits (39), Expect = 8e-14
Identities = 91/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 182 acatacggatgtatatagacatattttagagtgtagattcactcattttacttcgtatgt 241
||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||
Sbjct: 114 acatacggatgtatatagatgcattttat-gtgtagattcactcatttttctccgtatgt 56
Query: 242 agtccatagtggaatctctaagaaggcatatatttaggaacagaggg 288
||| |||||| ||||||| ||| | ||||||||||||| |||||
Sbjct: 55 ggtctatagtgaaatctctccaaagacttatatttaggaacggaggg 9
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 235 cgtatgtagtccatagtggaatctctaagaaggcatatatttaggaacagagggtgtac 293
||||||| ||||| |||| ||| |||| |||| | ||||||||||||| ||||| ||||
Sbjct: 108 cgtatgtggtccacagtgaaatatctacgaagacttatatttaggaacggagggagtac 166
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 77.8 bits (39), Expect = 8e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 88 tttagtattagatacatccgtatctagactaatctaagacaagaattttgggacggagg 146
|||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 37 tttagtgttagatacatccgtatctagataaatctaagacaagctttttgggacggagg 95
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 30 cctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatc 78
||||||||||||||| ||| ||||||||| |||| ||||| |||||||
Sbjct: 95 cctccgtcccaaaaagcttgtcttagatttatctagatacggatgtatc 47
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 108 tatctagactaatctaagacaagaattttgggacggagggagtat 152
||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaattttaggacggagggagtat 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 atactccctccgtcccaaaaattttggcttagatttgtcta 64
||||||||||||||| |||| | ||| ||||||||||||||
Sbjct: 4 atactccctccgtcctaaaattcttgtcttagatttgtcta 44
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 73.8 bits (37), Expect = 1e-12
Identities = 107/129 (82%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
||||||||||||| ||||| | ||| || ||||||||| ||| | ||||||| ||| |
Sbjct: 5 tactccctccgtctcaaaattattgttttgaatttgtctagatatggatgtatctagtta 64
Query: 85 tgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttgggacgg 143
|||||||||| | || ||||| |||||| | |||||||||||||||||||||||||
Sbjct: 65 cattttagtatttaaatgcatccatatctaaaaacatctaagacaagaattttgggacgg 124
Query: 144 agggagtat 152
|||||||||
Sbjct: 125 agggagtat 133
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||||| ||||||||| ||| || |||| ||||||| |||||||||||||
Sbjct: 60 tagatacatccatatctagacaaattcaaaacaataattttgagacggagggagta 5
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||||||||||||||| |||| |||||||| | ||||| ||||||||||||
Sbjct: 76 tagatacatccgtatctagacaaatccaagacaagtaatttggaacggagggagta 131
Score = 69.9 bits (35), Expect = 2e-11
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84
|||||||||||| ||||| ||| ||| |||||||||| ||||| ||||||| || |
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctagact 72
Query: 85 tgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgga 144
||||||| |||||| ||||||||||||| ||||||||||||| | || || |||||
Sbjct: 71 cattttagtgctagatatctccgtatctagacaaatctaagacaagtaattcggaacgga 12
Query: 145 gggagta 151
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 104 tccgtatctagactaatctaagacaagaattttgggacggagggagta 151
|||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 54 tccgtatctaaataaatctaagacaagaattttgggacggagggagta 101
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 101 acatccgtatctagactaatctaagacaagaattttgg 138
||||||||||||||| |||||||||||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaattttgg 17
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccaaaaattttggcttagattt 59
||||||||||||||||||| | ||| |||||||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagattt 67
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 69.9 bits (35), Expect = 2e-11
Identities = 94/111 (84%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 179 actacatacggatgtatatagacatattttagagtgtagattcactcattttacttcgta 238
|||||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||
Sbjct: 116 actacatacggatgtatatagacata-cttagagtacagattcactcattttgctccata 58
Query: 239 tgtag-tccatagtggaatctctaagaaggcatatatttaggaacagaggg 288
||||| || ||| | ||||||||| ||| | || |||||||||| |||||
Sbjct: 57 tgtagccccttagagaaatctctaaaaagacttacatttaggaacggaggg 7
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 94 attagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtat 152
||||||||||| | ||||||||| ||||||||||||||||||| ||| ||||||||||
Sbjct: 62 attagatacattcatatctagacaaatctaagacaagaattttatgacagagggagtat 4
Score = 56.0 bits (28), Expect = 3e-07
Identities = 107/132 (81%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 22 aaatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaag 81
|||||||||||| ||| |||| | ||| |||||||||||||| ||| | ||||||| |
Sbjct: 2 aaatactccctctgtcataaaattcttgtcttagatttgtctagatatgaatgtatctaa 61
Query: 82 tcatgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttggga 140
||| ||||| ||| ||||||| || | | ||||| || ||||||||||| |||| ||
Sbjct: 62 tcacgttttgacatttagatacaaccatttttagacaaacctaagacaagatttttaaga 121
Query: 141 cggagggagtat 152
||||||||||||
Sbjct: 122 cggagggagtat 133
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 22 aaatactccctccgtcccaaaaattttggcttagatttgtctaaa 66
|||||||||||||||| |||||| ||| ||||| ||||||||||
Sbjct: 135 aaatactccctccgtcttaaaaatcttgtcttaggtttgtctaaa 91
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 61.9 bits (31), Expect = 5e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 95 ttagatacatccgtatctagactaatctaagacaagaattttgggacggagggagtata 153
||||||||||||||||||||| ||||| ||||||| || ||||||||||| ||||||
Sbjct: 61 ttagatacatccgtatctagataaatcttagacaagctttctgggacggaggtagtata 3
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 108 tatctagactaatctaagacaagaattttgggacggagggagtat 152
|||| |||| ||||||||||||||||||||| ||| |||||||||
Sbjct: 48 tatcaagacaaatctaagacaagaattttggaacgaagggagtat 4
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 107 gtatctagactaatctaagacaagaattttgggacggagggagta 151
|||||||||| ||||||||||||||||||| || ||||||||||
Sbjct: 53 gtatctagacaaatctaagacaagaattttaagatggagggagta 97
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 58.0 bits (29), Expect = 7e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 51 cttagatttgtctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtat 110
|||| ||||||||| ||||| ||||||| || | ||||||| |||| | ||| ||||
Sbjct: 31 cttaaatttgtctagatacggatgtatctagactcattttagtgctagacatatctgtat 90
Query: 111 ctagactaatctaagacaagaattttgggacggagggagta 151
|||||| |||| |||||||| | ||||| ||||||||||||
Sbjct: 91 ctagacaaatcgaagacaagtaatttggaacggagggagta 131
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
||||||||||||||||||||| ||| ||||||||| | || | ||||||||||||
Sbjct: 60 tagatacatccgtatctagacaaatttaagacaagtaattcagaacggagggagta 5
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 218 attcactcattttacttcgtatgtagtccatagtggaatctctaagaaggcatatattta 277
||||| |||||| |||||||||||||||| ||||| ||||| || ||| | ||||||||
Sbjct: 79 attcattcatttcacttcgtatgtagtccgtagtgaaatctttagaaagacttatattta 20
Query: 278 ggaa 281
||||
Sbjct: 19 ggaa 16
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 120 tctaagacaagaattttgggacggagggagtat 152
|||| |||||| |||||||||||||||||||||
Sbjct: 90 tctacgacaagtattttgggacggagggagtat 122
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 120 tctaagacaagaattttgggacggagggagtat 152
|||| |||||| |||||||||||||||||||||
Sbjct: 36 tctacgacaagtattttgggacggagggagtat 4
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 50.1 bits (25), Expect = 2e-05
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 56 atttgtctaaatacgtatgtatcaagtcatgttttagtat-tagatacatccgtatctag 114
||||||| ||||| |||||||| || ||||||||||||| ||| ||||||| | | | |
Sbjct: 36 atttgtcaaaatatatatgtatctagacatgttttagtatataggtacatccatttttgg 95
Query: 115 actaatctaagacaagaattttgggacggagggagta 151
|| ||| ||| |||| ||||||| ||||||||||||
Sbjct: 96 acaaatggaagtcaagtattttggaacggagggagta 132
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataag 155
||||||||||||||||||||||||
Sbjct: 69 attttgggacggagggagtataag 92
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 132 attttgggacggagggagtataag 155
||||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataag 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 taaatactccctccgtcccaaaa 43
|||||||||||||||||||||||
Sbjct: 104 taaatactccctccgtcccaaaa 82
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataag 155
||||||||||||||||||||||||
Sbjct: 130 attttgggacggagggagtataag 153
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataag 155
||||||||||||||||||||||||
Sbjct: 93 attttgggacggagggagtataag 116
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 132 attttgggacggagggagtataag 155
||||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataag 1
>RF00906;MIR1122;EU626553.1/45919-45827 4572:Triticum urartu
Length = 93
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 270 tatatttaggaacagagggtgta 292
|||||||||||||||||||||||
Sbjct: 27 tatatttaggaacagagggtgta 5
>RF00906;MIR1122;AF306827.1/682-774 4568:Triticum monococcum
Length = 93
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 270 tatatttaggaacagagggtgta 292
|||||||||||||||||||||||
Sbjct: 67 tatatttaggaacagagggtgta 89
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 81 attttgggacggagggagtataa 103
>RF00906;MIR1122;AJ300144.1/1569-1477 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 tactccctctgttcctaaatact 28
|||||||||||||||||||||||
Sbjct: 89 tactccctctgttcctaaatact 67
>RF00906;MIR1122;EU282260.1/1308-1219 97361:Hordeum murinum
Length = 90
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tactccctctgttcctaaatact 28
|||||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatact 27
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataa 2
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataa 2
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 83 attttgggacggagggagtataa 105
>RF00906;MIR1122;AF525764.1/4346-4235 200361:Aegilops tauschii
subsp. strangulata
Length = 112
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 gacaagaattttgggacggagggagtataag 155
||||||| |||| ||||||||||||||||||
Sbjct: 82 gacaagatttttcggacggagggagtataag 112
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 111 attttgggacggagggagtataa 133
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 111 attttgggacggagggagtataa 133
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 72 attttgggacggagggagtataa 94
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 taaatactccctccgtcccaaaa 43
|||||||||||||||||||||||
Sbjct: 112 taaatactccctccgtcccaaaa 90
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa Indica
Group
Length = 99
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 132 attttgggacggagggagtataa 154
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataa 2
