miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 149 bits (75), Expect = 1e-35
Identities = 106/115 (92%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 18 ctactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagt 77
||||||| ||||||| |||||||||||||||||||| |||||||||| ||| |||||| |
Sbjct: 122 ctactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaat 63
Query: 78 tgtagatacatccatttttat-catttttgtgacaagtaattccgaacggaggga 131
||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 62 tgtagatacatccatttttatccatttttgtgacgagtaatttcgaacggaggga 8
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 113 bits (57), Expect = 7e-25
Identities = 101/117 (86%), Gaps = 9/117 (7%)
Strand = Plus / Minus
Query: 18 ctactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagt 77
||||||| || ||||| ||||||||||||||||||| |||||||||| ||| ||||||||
Sbjct: 112 ctactccctctgttcgaaattactcgtccaagaaatgaatgtatctagatgtattttagt 53
Query: 78 tgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagggagta 134
| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 tatagatacatccattttta---------tgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatc-atttttgtgacaagt 114
||||||||| ||| ||||||||| |||||| ||||||||||||| |||| ||||||||||
Sbjct: 42 atgtatctagatgtattttagttctagatatatccatttttatccatttgtgtgacaagt 101
Query: 115 aattccgaacggagggagtat 135
||||||| |||||||||||||
Sbjct: 102 aattccggacggagggagtat 122
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||| ||||| |||| ||| |||||| ||| |||||| ||| |||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 79 gtagatacatccatttttat-catttttgtgacaagtaattccgaacggagggagta 134
||||||||||||||||||| ||||| || |||||||||||||| || |||||||||
Sbjct: 61 ctagatacatccatttttatccatttatgcgacaagtaattccggacagagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 108 gacaagtaattccgaacggagggagtatat 137
|||||||| ||||| |||||||||||||||
Sbjct: 95 gacaagtatttccggacggagggagtatat 124
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| | ||| ||||| |||| |||||| ||| ||||||||| ||| |||||||||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 79 gtagatacatccattttta-tcatttttgtgacaagtaattccgaacggagggagta 134
||||||||||||||| || ||||||||| |||||||||||||| | ||||||||||
Sbjct: 65 atagatacatccatttctattcatttttgcgacaagtaattccgcatggagggagta 121
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttat-catttttgtgacaagt 114
||||||||| ||| ||| || || ||||||||||||||||||| ||||| ||||||||||
Sbjct: 84 atgtatctagatgtattataattctagatacatccatttttatacatttatgtgacaagt 25
Query: 115 aattccgaacggagggagtat 135
||||||| |||||||||||||
Sbjct: 24 aattccggacggagggagtat 4
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 26 tccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagttgtagata 85
||||||| ||||||||||||||| |||| ||||||||| ||| ||||||||| ||||||
Sbjct: 12 tccgttccgaattactcgtccaataaatggatgtatctagatgtattttagttatagata 71
Query: 86 catccattt 94
|||||||||
Sbjct: 72 catccattt 80
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 18 ctactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagt 77
||||||| |||||| ||||||||| ||| |||||| |||||||||| ||| ||||||||
Sbjct: 112 ctactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagt 53
Query: 78 tgtagatacatccat 92
| |||||||||||||
Sbjct: 52 tctagatacatccat 38
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatc-atttttgtgacaagt 114
||||||||| ||| ||||||||| |||||||||||||||||||| |||| || |||||||
Sbjct: 42 atgtatctagatgtattttagttctagatacatccatttttatcaatttatgcgacaagt 101
Query: 115 aattccgaacggagggagt 133
||||| | || ||||||||
Sbjct: 102 aattctggacagagggagt 120
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 17 actactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttag 76
|||||||| ||||||| |||||||||||| |||||| ||||||||| ||| |||||||
Sbjct: 3 actactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttag 62
Query: 77 ttgtagatacatccattt 94
|| |||||| ||||||||
Sbjct: 63 ttttagatatatccattt 80
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||| || ||||| | ||| |||||| ||||||||| | | |||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 79 gtagatacatccatttttat-catttttgtgacaagtaattccgaacggagggagtat 135
||||||||||||||||||| ||||| || ||||||| ||||| |||||||||||||
Sbjct: 65 ctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagtat 122
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 69.9 bits (35), Expect = 9e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttat-catttttgtgacaagt 114
||||||||| ||||||||||||| || |||||| ||||| ||| |||||||| || ||||
Sbjct: 84 atgtatctagatgcattttagttctaaatacattcatttctatccatttttgcgataagt 25
Query: 115 aattccgaacggagg 129
||||||| |||||||
Sbjct: 24 aattccggacggagg 10
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 70 attttagttgtagatacatccatttttat-catttttgtgacaagtaattccgaacggag 128
||||||||| ||||||||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 70 attttagttctagatacatccatttatatccatttctgcgacaagtatttccggacggag 11
Query: 129 ggagta 134
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccatttttat-catttttgtgacaagtaattccgaacggag 128
||||||||| ||||| ||||||||| ||| |||||||| |||||||| ||| ||||||||
Sbjct: 56 attttagttttagatgcatccatttatattcatttttgcgacaagtatttctgaacggag 115
Query: 129 ggagta 134
||||||
Sbjct: 116 ggagta 121
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 97/118 (82%)
Strand = Plus / Minus
Query: 18 ctactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagt 77
||||||| ||||||||||| |||| |||| | |||| |||||||||| | ||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagt 62
Query: 78 tgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagggagtat 135
| |||||||||| ||| | |||||| | |||||||| ||| | |||||||||||||
Sbjct: 61 tatagatacatctattatattcatttctaggacaagtatttctggacggagggagtat 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 98 tcatttttgtgacaagtaattccgaacggagggagta 134
|||||||| |||||||| ||||||||||||||||||
Sbjct: 84 tcatttttaggacaagtatttccgaacggagggagta 120
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||| |||||||| | ||| |||||| ||||||||| | | |||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 79 gtagatacatccattt-ttatcatttttgtgacaagtaattccgaacggagggagtat 135
||||||||||||||| || |||||| |||||||| ||||| |||||||||||||
Sbjct: 61 ctagatacatccatttctttccattttgacgacaagtacttccggacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 tgacaagtaattccgaacggagggagtata 136
|||||| |||||||| ||||||||||||||
Sbjct: 94 tgacaaataattccggacggagggagtata 123
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttat-catttttgtgacaagt 114
||||||||| ||| ||||||||| ||||||||||||||||||| ||||| | |||||||
Sbjct: 42 atgtatctagatgtattttagttctagatacatccatttttatgcatttctacgacaagt 101
Query: 115 aattccgaacggagggagtat 135
| || | |||||||||||||
Sbjct: 102 attttgggacggagggagtat 122
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttat-catttttgtgacaagt 114
||||||||| ||| ||||||||| ||||||||||||||||||| ||||| | |||||||
Sbjct: 84 atgtatctagatgtattttagttctagatacatccatttttatgcatttctacgacaagt 25
Query: 115 aattccgaacggagggagtat 135
| || | |||||||||||||
Sbjct: 24 attttgggacggagggagtat 4
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| |||||||||||||||| ||| |||||| ||||||||| | | |||||||||
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 79 gtagatacatccatttt 95
|||||| |||||||||
Sbjct: 51 ctagatagatccatttt 35
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 99 catttttgtgacaagtaattccgaacggagggagta 134
||||| || |||||||||||||||||||||||||||
Sbjct: 76 catttctgagacaagtaattccgaacggagggagta 111
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 aactactccttccgttcggaattact 41
||||||||| ||||||||||||||||
Sbjct: 2 aactactccctccgttcggaattact 27
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||| ||||| |||| |||| ||| || |||||||||| | |||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagtt 61
Query: 79 gtagatacatccatttttatcatttttgtgacaagtaattccgaacggagggagtat 135
|||||||||||| | | ||||||| |||||||| ||||| |||||||||||||
Sbjct: 60 atagatacatccaatatatccatttttaggacaagtatttccggacggagggagtat 4
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
|||||| || |||||||||||||||| ||||||| ||||||||| ||||| |||||||
Sbjct: 56 attttacttatagatacatccattttatacatttttatgacaagtatttccggacggagg 115
Query: 130 gagta 134
|||||
Sbjct: 116 gagta 120
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
||||||||| |||||||||||||| | |||||| || |||||||| ||||| |||||||
Sbjct: 69 attttagttatagatacatccattatattcatttctgggacaagtatttccggacggagg 10
Query: 130 gagta 134
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 55 aatgtatctaaatgcattttagttgtagatacatccatttttat-catttttgtgacaag 113
|||||||||| ||| ||||||||| ||||||||| ||||||| ||||| | ||||||
Sbjct: 80 aatgtatctagatgtattttagttctagatacatttatttttaggcatttctccgacaag 21
Query: 114 taattccgaacggagggagt 133
|| |||||||||||||||||
Sbjct: 20 tatttccgaacggagggagt 1
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 70 attttagttgtagatacatccatttttat-catttttgtgacaagtaattccgaacggag 128
||||||||| ||||||||||||||||||| ||||| | |||||||| ||| | ||||||
Sbjct: 70 attttagttctagatacatccatttttatgcatttctccgacaagtatttcaggacggag 11
Query: 129 ggagtata 136
||||||||
Sbjct: 10 ggagtata 3
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatc-atttttgtgacaagt 114
||||||||| || ||||||||| ||||||||| ||||||||| |||| || |||||||
Sbjct: 84 atgtatctagatatattttagttctagatacattcatttttatatatttgtgcgacaagt 25
Query: 115 aattccgaacggagggagta 134
||||||| ||||| ||||||
Sbjct: 24 aattccggacggacggagta 5
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 99 catttttgtgacaagtaattccgaacggagggagtatat 137
|||||| | ||||||||||||||||||||||||||||||
Sbjct: 76 cattttcgcgacaagtaattccgaacggagggagtatat 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| |||||||||||||||| ||| |||| ||||||||| | | |||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 79 gtagatacatccatttt 95
|||||||||| |||||
Sbjct: 51 ctagatacatctatttt 35
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||||| |||||||| ||| || |||| ||||||||| | |||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 79 gtagatacatccattttt 96
|||||||||||||||||
Sbjct: 51 ctagatacatccattttt 34
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 99 catttttgtgacaagtaattccgaacggagggagta 134
|||||||| |||||||||||| ||||||||||||||
Sbjct: 40 catttttgagacaagtaattcggaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 99 catttttgtgacaagtaattccgaacggagggagta 134
||||||| |||||||||||| ||||||||||||||
Sbjct: 76 cattttttcgacaagtaattcagaacggagggagta 111
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 60.0 bits (30), Expect = 9e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccatttttatc-atttttgtgacaagtaattccgaacggag 128
||||||||| || |||||| ||||| | || ||||| |||||||||||||||| ||||||
Sbjct: 56 attttagttctaaatacattcatttatttccattttggtgacaagtaattccggacggag 115
Query: 129 ggagta 134
||||||
Sbjct: 116 ggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 99 catttttgtgacaagtaattccgaacggagggagta 134
||||||| || |||||||||||| ||||||||||||
Sbjct: 40 catttttatgtcaagtaattccggacggagggagta 5
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatcatttttg-tgacaagt 114
||||||||| ||| ||||||||| || |||||||| ||||| || ||||| ||||||||
Sbjct: 84 atgtatctagatgtattttagttctaaatacatccctttttgtccattttgatgacaagt 25
Query: 115 aattccgaacggagggagta 134
| || || ||||||||||||
Sbjct: 24 attttcggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 80 tagatacatccatttttat-catttttgtgacaagtaattccgaacggagggagta 134
||||||||||| |||||| |||||| ||||||||| ||||| ||||||||||||
Sbjct: 76 tagatacatccccttttattcattttgatgacaagtatttccggacggagggagta 131
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatcatttttg-tgacaagt 114
||||||||| ||| ||||||||| ||||||||| || ||||| ||||| ||||||||
Sbjct: 84 atgtatctagatgtattttagttctagatacatttcttattatccattttgatgacaagt 25
Query: 115 aattccgaacggagggagta 134
| || |||||||||||||||
Sbjct: 24 attttcgaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 99 catttttgtgacaagtaattccgaacggagggagta 134
|||||| |||||||||| ||||| ||||||||||||
Sbjct: 97 cattttggtgacaagtatttccggacggagggagta 132
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccattt 94
||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 41 atgtatctagatgtattttagttctagatacatccattt 79
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccattt 94
||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 74 atgtatctagatgtattttagttctagatacatccattt 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gacaagtaattccgaacggagggagta 134
|||||||||||| ||||||||||||||
Sbjct: 85 gacaagtaattcggaacggagggagta 111
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccatttttatcatttttg-tgacaagtaattccgaacggag 128
||||||||| || |||||| ||||||||| ||||| ||||||||| || || ||||||
Sbjct: 66 attttagttctaaatacatttatttttatccattttgatgacaagtattttcggacggag 125
Query: 129 ggagtatatt 138
||||||||||
Sbjct: 126 ggagtatatt 135
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 48 agaaataaatgtatctaaatgcatttt-agttgtagatacatccatttttatc-attttt 105
||||||| ||||||||||| | ||||| |||| ||||||||| |||||||| | |||| |
Sbjct: 92 agaaatagatgtatctaaacgtatttttagttctagatacattcatttttacccatttct 33
Query: 106 gtgacaagtaattccgaacggaggg 130
|||||||||||||| | ||||||
Sbjct: 32 acgacaagtaattccggatggaggg 8
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 68/81 (83%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatcatttttg-tgacaagt 114
||||||||| ||| ||||||||| |||||||| | |||||||| || || |||||| |
Sbjct: 84 atgtatctagatgtattttagttctagatacaccactttttatccattctgatgacaaat 25
Query: 115 aattccgaacggagggagtat 135
| ||||| |||||||||||||
Sbjct: 24 atttccggacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 tgacaagtaattccgaacggagggagtata 136
||||||||| ||||| ||||||||||||||
Sbjct: 104 tgacaagtatttccggacggagggagtata 133
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
||||||||| |||||||||| ||||| |||||| | |||||||| || || |||||||
Sbjct: 69 attttagttatagatacatcaattttattcatttctaggacaagtatttgcggacggagg 10
Query: 130 gagta 134
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 80 tagatacatccatttttatcatttttg-tgacaagtaattccgaacggagggagtat 135
||||||||||| ||||||| ||||| ||||||||| ||||| |||||||||||||
Sbjct: 60 tagatacatccccttttatccattttgatgacaagtatttccggacggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccattttta-tcatttttgtgacaagtaattccgaacggag 128
||||||||| |||||||||| |||||| ||| ||| ||||||||| || || ||||||
Sbjct: 66 attttagttctagatacatctctttttagtcactttgatgacaagtattttcggacggag 125
Query: 129 ggagtat 135
|||||||
Sbjct: 126 ggagtat 132
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
||||||||| |||||||||||||| | | |||||| | |||||| ||||| |||||||
Sbjct: 56 attttagttatagatacatccattatatttatttttaggtcaagtatttccggacggagg 115
Query: 130 gagta 134
|||||
Sbjct: 116 gagta 120
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gacaagtaattccgaacggaggga 131
||||||||||||||||||||||||
Sbjct: 31 gacaagtaattccgaacggaggga 8
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttt 95
||||||| | ||| ||||||||| ||||||||||||||||
Sbjct: 74 atgtatcaagatgtattttagttctagatacatccatttt 35
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 93/116 (80%)
Strand = Plus / Plus
Query: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
|||||| ||||| || || |||| ||| |||||| ||||||||| | | |||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagtt 64
Query: 79 gtagatacatccatttttatcatttttgtgacaagtaattccgaacggagggagta 134
|| |||||| |||||| ||| ||| | ||||||||||||| || |||||||||
Sbjct: 65 ctaaatacattcattttaatccatttcggcacaagtaattccggacagagggagta 120
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccatttttatc 99
||||||||| | | |||||| || ||||||||||||||||||||
Sbjct: 42 atgtatctagacgtattttacttctagatacatccatttttatc 85
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gacaagtaattccgaacggagggagta 134
|||||||||||| ||||||||||||||
Sbjct: 117 gacaagtaattcggaacggagggagta 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 105 tgtgacaagtaattccgaacggagggagta 134
||||||||||||||| ||||| ||||||||
Sbjct: 34 tgtgacaagtaattcggaacgaagggagta 5
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 108 gacaagtaattccgaacggagggagta 134
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtaattcggaacggagggagta 5
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 108 gacaagtaattccgaacggagggagta 134
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtaattcagaacggagggagta 5
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 55 aatgtatctaaatgcattttagttgtagatacatccatt 93
||||||||||||| ||||||||| | ||||||||||||
Sbjct: 84 aatgtatctaaatttattttagttatggatacatccatt 46
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 56 atgtatctaaatgcattttagttgtagatacatccattt 94
||||||||| ||| |||| |||| |||||||||||||||
Sbjct: 42 atgtatctagatgtatttcagttctagatacatccattt 80
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 30 ttcggaattactcgtccaagaaataaatgtatctaaatgcattttagttgtagatacatc 89
|||||||||||| ||| |||||| ||||||||| | | |||||||| |||||||||
Sbjct: 24 ttcggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacatt 83
Query: 90 catttt 95
||||||
Sbjct: 84 catttt 89
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 attttagttgtagatacatccatttttatc 99
||||||||| || |||||||||||||||||
Sbjct: 70 attttagttctacatacatccatttttatc 41
