miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 186 bits (94), Expect = 8e-47
Identities = 121/129 (93%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggacaaaaa--gggatgtatttaga 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 63 actaaaatacatctagatacatccccttttattcattttgatgacaagtatttccggacg 122
Query: 154 gagggagta 162
|||||||||
Sbjct: 123 gagggagta 131
Score = 123 bits (62), Expect = 9e-28
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaaaatgaat--aaaaggggatgtatctaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || |||| ||||||||| || | |||||||||||||||| ||||| ||||||
Sbjct: 73 tgtattttagttctaaatacatccctttttgtccattttgatgacaagtattttcggacg 14
Query: 154 gagggagta 162
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 178 bits (90), Expect = 2e-44
Identities = 120/129 (93%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||||||||||||||||||||| ||| |||||| | ||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaa--gagatgtatctaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 73 actaaaatatgtctagatacatccccttttatccattttgatgacaagtatttccggacg 14
Query: 154 gagggagta 162
|||||||||
Sbjct: 13 gagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/129 (85%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggat--aaaaggggatgtatctaga 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || |||||||||||| | || || || ||||||||||| ||||| ||||||
Sbjct: 63 catattttagttctagatacatctctttttagtcactttgatgacaagtattttcggacg 122
Query: 154 gagggagta 162
|||||||||
Sbjct: 123 gagggagta 131
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 159 bits (80), Expect = 2e-38
Identities = 120/131 (91%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||| ||||||||||||||||||||||| |||| || | |||||||||||
Sbjct: 5 tactccctccgttcgaaaatacttgtcatcaaaatggataataa--gaaatgtatctaga 62
Query: 94 actaaaatacatctagatacat-ccccttctatccattttgatgacaactatttccggac 152
|||||||||||||||||||||| |||||| ||||||||||| |||||| |||||||||||
Sbjct: 63 actaaaatacatctagatacatcccccttttatccattttggtgacaagtatttccggac 122
Query: 153 ggagggagtaa 163
|||||||||||
Sbjct: 123 ggagggagtaa 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 109/129 (84%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| |||||||||||| ||||||| || |||| |||||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtcaccaaaatggat-aaaagggggatgtatctaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || ||||||||||| | | |||||||||||||||||| ||||| || |||
Sbjct: 73 tgtattttagttctagatacatttcttattatccattttgatgacaagtattttcgaacg 14
Query: 154 gagggagta 162
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 155 bits (78), Expect = 3e-37
Identities = 117/129 (90%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||| ||||||||| |||| ||||||| || ||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtgg--tgtatctaga 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||
Sbjct: 63 actaaaatacatctagatacatccccttttattcatcttgatgacaagtatttccggacg 122
Query: 154 gagggagta 162
|||||||||
Sbjct: 123 gagggagta 131
Score = 115 bits (58), Expect = 2e-25
Identities = 112/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaat--aaaaggggatgtatctaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || |||||||||| | | || |||||||| ||||||||| ||||||||||||
Sbjct: 73 tgtattttagttctagatacaccactttttatccattctgatgacaaatatttccggacg 14
Query: 154 gagggagta 162
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 153 bits (77), Expect = 1e-36
Identities = 113/124 (91%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||
Sbjct: 130 tactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaa--gagatatatctaga 73
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
||||||||||||||| ||||||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 72 actaaaatacatctaaatacatcccgttttatttattttgatgacaagtatttccggacg 13
Query: 154 gagg 157
||||
Sbjct: 12 gagg 9
Score = 73.8 bits (37), Expect = 8e-13
Identities = 103/124 (83%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 39 cctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctagaactaa 98
|||||||||| ||||||||||||||||||| ||| |||| ||||||||| |||| ||
Sbjct: 9 cctccgtccggaaatacttgtcatcaaaataaat--aaaacgggatgtatttagatgtat 66
Query: 99 aatacatctagatacatccccttctatccattttgatgacaactatttccggacggaggg 158
|| |||||||| ||| | || | | |||||||||||||| ||||| |||||||||||
Sbjct: 67 tttagttctagatatatctctttttgttcattttgatgacaagtattttcggacggaggg 126
Query: 159 agta 162
||||
Sbjct: 127 agta 130
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 147 bits (74), Expect = 6e-35
Identities = 116/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 5 tactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaaga--atgtatctaga 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
| ||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||
Sbjct: 63 attaaaatacatctagatacatcttcttttatccattttgatgacaagtatttctggacg 122
Query: 154 gagggagta 162
||| |||||
Sbjct: 123 gagagagta 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 107/130 (82%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctag 92
|||||| |||||||| |||||||||||||||||||| || ||||| |||||||||||
Sbjct: 132 ctactctctccgtccagaaatacttgtcatcaaaatggat--aaaagaagatgtatctag 75
Query: 93 aactaaaatacatctagatacatccccttctatccattttgatgacaactatttccggac 152
| || || ||||||||||| | || |||||||||||||||||| ||||| |||||
Sbjct: 74 atgtattttaattctagatacattcttttttatccattttgatgacaagtattttcggac 15
Query: 153 ggagggagta 162
| || |||||
Sbjct: 14 gaagcgagta 5
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 145 bits (73), Expect = 3e-34
Identities = 118/132 (89%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||| |||||| |||||||||||||| |||||||||| || |||||| |
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaagg--atatatctaaa 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
||||| ||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 73 actaatatacatctagatacatctccttttatttattttgatgacaagtatttccggacg 14
Query: 154 gagggagtaatt 165
|||| |||||||
Sbjct: 13 gaggaagtaatt 2
Score = 91.7 bits (46), Expect = 3e-18
Identities = 109/129 (84%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||| |||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtccggaaatacttgtcatcaaaataaat--aaaaggagatgtatctaga 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| | || | |||||| |||| || |||||||||||||||||| ||||| |||||
Sbjct: 63 tgtatattagttttagatatatccttttttatccattttgatgacaattatttttggacg 122
Query: 154 gagggagta 162
|||||||||
Sbjct: 123 gagggagta 131
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 129 bits (65), Expect = 2e-29
Identities = 98/108 (90%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 43 cgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctagaactaaaata 102
||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatg--atgtacctagaactaaaata 71
Query: 103 catctagatacatccccttctatccattttgatgacaactatttccgg 150
|||||| |||||| ||||| ||| |||||||||||||| |||||||||
Sbjct: 72 catctatatacattcccttttattcattttgatgacaagtatttccgg 119
Score = 58.0 bits (29), Expect = 5e-08
Identities = 86/104 (82%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 50 aaatacttgtcatcaaaatgaataaaaaaggggatgtatctagaactaaaatacatctag 109
||||||||||||||||||||||| ||||||| |||||| |||| || || |||||
Sbjct: 115 aaatacttgtcatcaaaatgaat--aaaagggaatgtatatagatgtattttagttctag 58
Query: 110 atacatccccttctatccattttgatgacaactatttccggacg 153
|||||| || |||||||||||||||||| ||||| ||||||
Sbjct: 57 gtacatcattttttatccattttgatgacaagtattttcggacg 14
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 113 bits (57), Expect = 9e-25
Identities = 78/84 (92%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||||||||||||||||||||| ||||| ||||| | ||||||| ||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaa--gagatgtatgtaga 85
Query: 94 actaaaatacatctagatacatcc 117
||||||||||||||||||||||||
Sbjct: 84 actaaaatacatctagatacatcc 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 131 ttgatgacaactatttccggacggagggagta 162
|||||||||| ||||| |||||||||||||||
Sbjct: 111 ttgatgacaagtattttcggacggagggagta 142
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 113 bits (57), Expect = 9e-25
Identities = 105/120 (87%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 43 cgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctagaactaaaata 102
||||||||||||||||||||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaa--gagatgtacctagaactaaaata 71
Query: 103 catctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
|||||||||||| | || ||| | ||||||||||| ||||| |||||||||||||||
Sbjct: 72 tatctagatacattcttttttatttactttgatgacaagtattttcggacggagggagta 131
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/120 (85%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtaaataaaaaa--gaatgtatctaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || ||||| |||||| | || |||||||||||||||||| ||||| ||||||
Sbjct: 73 tatattttagttctaggtacatctctttttatccattttgatgacaagtattttcggacg 14
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 107 bits (54), Expect = 6e-23
Identities = 75/81 (92%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||
Sbjct: 121 tactccctctgtccgaaaatacttgtcatcaaaatggataaaaa--tgaatgtatctaga 64
Query: 94 actaaaatacatctagataca 114
|||||||||||||||||||||
Sbjct: 63 actaaaatacatctagataca 43
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 105 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 64 tctagatacattcatttttatccattttgatgacaagtattttcggacagagggagta 121
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 30 ttactactccctccgtccgaaaatacttgtcat 62
||||||||||||| |||||||||||||||||||
Sbjct: 1 ttactactccctctgtccgaaaatacttgtcat 33
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 107 bits (54), Expect = 6e-23
Identities = 111/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaa--taaatgtatttaga 74
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
||||||||| | || |||||||| ||| ||| ||||||||||||| ||||| ||||||
Sbjct: 73 actaaaatatgtttaaatacatcctcttatatttattttgatgacaagtattttcggacg 14
Query: 154 gagggagta 162
||||||||
Sbjct: 13 aagggagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 106/129 (82%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||| |||||||||||||||||||||||||| ||| | ||| |||||||| || |
Sbjct: 5 tactcccttcgtccgaaaatacttgtcatcaaaataaat--ataagaggatgtatttaaa 62
Query: 94 actaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 153
|| || |||| |||||| || |||||||||||||||||| ||||| ||||||
Sbjct: 63 catattttagttctaaatacatttatttttatccattttgatgacaagtattttcggacg 122
Query: 154 gagggagta 162
|||||||||
Sbjct: 123 gagggagta 131
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/84 (90%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||| |||||||||||| | ||||| ||||||| || |||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatgg--atgtatctaga 64
Query: 94 actaaaatacatctagatacatcc 117
||||||||||||||||||||||||
Sbjct: 63 actaaaatacatctagatacatcc 40
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/84 (90%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||| |||||||||||| | ||||| ||||||| || |||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatgg--atgtatctaga 62
Query: 94 actaaaatacatctagatacatcc 117
||||||||||||||||||||||||
Sbjct: 63 actaaaatacatctagatacatcc 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| || ||||||||| ||||| ||||||| || || ||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatgg--atatatctaga 64
Query: 94 actaaaatacatctagatacatcc 117
||||||||||||||||||||||||
Sbjct: 63 actaaaatacatctagatacatcc 40
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 105 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
|||||||| |||| || ||||||||| |||||| || ||||||||||||||||||
Sbjct: 64 tctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| || |||||||| |||||||| ||| || |||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatg--gaaagaaatggatgtatctaga 62
Query: 94 actaaaatacatctagatacatcc 117
|||||||||| |||||||||||||
Sbjct: 63 actaaaatacgtctagatacatcc 86
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 105 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
||||||||||||| |||| |||||||||| ||||| || ||||||||||||||||||
Sbjct: 62 tctagatacatccatttctttccattttgacgacaagtacttccggacggagggagta 5
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 77.8 bits (39), Expect = 5e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaa 76
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggataaaa 47
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaataaaa 76
||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 97 ctacttcctccgtccgaaaatacttgtcatcaaaatggataaaa 54
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 123 tatccattttgatgacaactatttccggacggagggagta 162
|||||||||||||||||| ||||| |||||||||||||||
Sbjct: 44 tatccattttgatgacaagtattttcggacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 116 ccccttctatccattttgatgacaactatttccggacggagggagta 162
|||||| |||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 50 ccccttttatccattttgatgacaagtattttcggacggaggaagta 96
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||||||||||||||||||||||
Sbjct: 75 ggatgtatctagaactaaaatacatctagatacatcc 39
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 73.8 bits (37), Expect = 8e-13
Identities = 72/83 (86%), Gaps = 3/83 (3%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||| |
Sbjct: 120 tactccctccgtccggaaatacttgtcataaaaatgtataaaa---tggatgtatctata 64
Query: 94 actaaaatacatctagatacatc 116
| ||||||| ||||||||||||
Sbjct: 63 agtaaaataagtctagatacatc 41
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 127 cattttgatgacaactatttccggacggagggagta 162
|||||| ||||||| |||||||||||||||||||||
Sbjct: 85 catttttatgacaagtatttccggacggagggagta 120
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||||||||||||||||||||||
Sbjct: 76 ggatgtatctagaactaaaatacatctagatacatcc 40
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ttactactccctccgtccgaaaatacttgtcat 62
||||||||||| ||||||| |||||||||||||
Sbjct: 1 ttactactcccgccgtccggaaatacttgtcat 33
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||||||||||||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatctagatacatcc 76
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||| ||||||||||||||||||||||| |||||||| |||||| || ||| || |
Sbjct: 5 tactctctccgtccgaaaatacttgtcattaaaatgaacaaaaaa---aatatatttaaa 61
Query: 94 actaaaatacatctagatacat 115
|||||||||||| |||||||||
Sbjct: 62 actaaaatacatttagatacat 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaa 75
||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 130 tactccctctatccgaaaatacttgtcatcaaaataaataaa 89
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacat 115
|||||||||||||||||||||||||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatctagatacat 74
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/82 (86%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| || ||||||||| ||||| ||||||| || |||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatgg--atgtatctaga 62
Query: 94 actaaaatacatctagatacat 115
| || |||||||||||||||||
Sbjct: 63 attataatacatctagatacat 84
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
||||||||||||| || ||| ||||| |||||| || ||||||||||||||||||
Sbjct: 62 tctagatacatccatttttatacatttatgtgacaagtaattccggacggagggagta 5
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
||||||||||||||||||||||||||| |||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatcttgatacatcc 76
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
||||||||||| |||||||||||||||||||||||||
Sbjct: 76 ggatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 83 atgtatctagaactaaaatacatctagatacat 115
|||||||||||||||||||||||||||||||||
Sbjct: 47 atgtatctagaactaaaatacatctagatacat 79
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||| ||||||||||| ||||| ||||||| || |||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatgg--atgtatctaga 62
Query: 94 actaaaatacatctagatacatcc 117
|||||||||| ||||| |||||||
Sbjct: 63 actaaaatacgtctaggtacatcc 86
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
||||||||||| |||||||||||||||||||||||||
Sbjct: 76 ggatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||| ||||||||||||||||||||
Sbjct: 76 ggatgtatctagaactgaaatacatctagatacatcc 40
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
||||||||||||||||||||||| |||||||||||||
Sbjct: 76 ggatgtatctagaactaaaatacgtctagatacatcc 40
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 37 tccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctagaact 96
||||||||| ||||| |||| |||| |||||| ||||||| || ||||||||| || |
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatgg--atgtatctacaatt 65
Query: 97 aaaatacatctagatacat 115
|||||||||||||||||||
Sbjct: 66 aaaatacatctagatacat 84
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtcat 62
||||||||||||||||||||||||||||||||
Sbjct: 114 tactactccctccgtccgaaaatacttgtcat 83
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||| ||||||||||||||||||||||||| ||||
Sbjct: 40 ggatgtgtctagaactaaaatacatctagatatatcc 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 124 atccattttgatgacaactatttccggacggagggagta 162
||||||||||||||||| || ||| ||||||||||||||
Sbjct: 43 atccattttgatgacaagtaattctggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatg 69
|||||||||||||| || |||||||||||||||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatg 40
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 82 gatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||||||| |||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||||||||| ||||| ||| ||| || |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggatataaatgg--atgtatctaga 62
Query: 94 actaaaatacatct 107
||||||||||||||
Sbjct: 63 actaaaatacatct 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||||||||||||||||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtc 96
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 105 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 162
||||||||||||| || ||||||||| ||||| |||||||||||||||||||||
Sbjct: 62 tctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatct 90
|||||||||||| ||||| || |||||||| ||||| ||||||| || ||||||||
Sbjct: 2 tactactccctctgtccggaattacttgtcgcataaatggataaaaatgg--atgtatct 59
Query: 91 agaactaaaatacatctagata 112
|||| |||||||||||||||||
Sbjct: 60 agaattaaaatacatctagata 81
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 136 gacaactatttccggacggagggagta 162
||||| |||||||||||||||||||||
Sbjct: 95 gacaagtatttccggacggagggagta 121
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacat 115
||||||||||| |||||||||||||||||||||||
Sbjct: 40 ggatgtatctataactaaaatacatctagatacat 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 124 atccattttgatgacaactatttccggacggagggagta 162
||||||||| ||||||| || ||||| ||||||||||||
Sbjct: 43 atccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 83 atgtatctagaactaaaatacatctagatacatc 116
|||||||||||||||||||||| |||||||||||
Sbjct: 74 atgtatctagaactaaaatacaactagatacatc 41
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||||||| |||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatatgtctagatacatcc 76
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||| |||||| |||||||||||||||||||||||||
Sbjct: 76 ggatatatctaaaactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||| |||||||||||||||||| |||||||||||||
Sbjct: 40 ggatctatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 83 atgtatctagaactaaaatacatctagatacat 115
|||||||||||||||||||| ||||||||||||
Sbjct: 52 atgtatctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 81 ggatgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||| |||||||| |||||||||||||
Sbjct: 76 ggatgtatctagaagtaaaatacgtctagatacatcc 40
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 69/82 (84%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||||||||| | |||||| || | | ||||||||||| |
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggat---atattggatgtatctata 61
Query: 94 actaaaatacatctagatacat 115
||||||||| |||||||||||
Sbjct: 62 actaaaataagtctagatacat 83
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 123 tatccattttgatgacaactatttccggacggagggagta 162
|||||||||| | ||||| |||||||||||||||||||||
Sbjct: 44 tatccatttttaggacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtc 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 136 gacaactatttccggacggagggagta 162
||||| |||||||||||||||||||||
Sbjct: 94 gacaagtatttccggacggagggagta 120
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 69/82 (84%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
|||||||||||||| ||||||||||| | ||||||||| || || ||||||||| |
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaatataatag---atgtatctata 61
Query: 94 actaaaatacatctagatacat 115
||||||||| |||||||||||
Sbjct: 62 actaaaataagtctagatacat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaat 72
||||||||||||| || ||||||||||| | |||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaat 82
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtc 31
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 83 atgtatctagaactaaaatacatctagatacatc 116
|||||| |||||||||||||| ||||||||||||
Sbjct: 74 atgtatttagaactaaaatacgtctagatacatc 41
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaa 76
||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccgcaaatacttgtcctagaaatgaataaaa 47
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 atgtatctagaactaaaatacatctagatacatcc 117
|||||| |||||||||||| |||||||||||||||
Sbjct: 52 atgtatttagaactaaaatgcatctagatacatcc 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 32 actactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||||
Sbjct: 123 actactccctccgtcagaaaatacttgtc 95
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 125 tccattttgatgacaactatttccggacggagggagta 162
||||||||| |||||| || ||||||||||||||||||
Sbjct: 84 tccattttggtgacaagtaattccggacggagggagta 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 124 atccattttgatgacaactatttccggacggagggagtaat 164
||||||||| ||| ||| || ||||||||||||||||||||
Sbjct: 43 atccatttttatgtcaagtaattccggacggagggagtaat 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatg 69
||||||||||||||| || ||||||||| |||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatg 86
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 83 atgtatctagaactaaaatacatctagatacat 115
|||||||||||| ||||||| ||||||||||||
Sbjct: 42 atgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 68/82 (82%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||| ||||||||||||| | || || ||||||| ||||||| || |
Sbjct: 5 tactccctccgtcagaaaatacttgtcctaaagataaataaaa----tgatgtatgtata 60
Query: 94 actaaaatacatctagatacat 115
||||||||| |||||||||||
Sbjct: 61 actaaaataagtctagatacat 82
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 66/79 (83%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93
||||||||||||||| ||||||||||| ||||||||| || ||||||||||| |
Sbjct: 5 tactccctccgtccggaaatacttgtcccagaaatgaatataa---tggatgtatctata 61
Query: 94 actaaaatacatctagata 112
||||||||| ||||||||
Sbjct: 62 actaaaataagtctagata 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 136 gacaactatttccggacggagggagta 162
||||| |||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgt 59
||||||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 acaactatttccggacggagggagta 162
|||| |||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 gtatctagaactaaaatacatctagata 112
|||| |||||||||||||||||||||||
Sbjct: 44 gtatttagaactaaaatacatctagata 71
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatct 90
||||||||||||||| | ||||||||||| |||||||||| ||| ||||| ||||
Sbjct: 124 tactactccctccgttcagaaatacttgtcgcaaaaatgaatataaa--tggatgcatct 67
Query: 91 agaactaaaatacatctagatacatcc 117
| |||||||||| |||| ||||||||
Sbjct: 66 aaaactaaaatatgtctaaatacatcc 40
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 83 atgtatctagaactaaaatacatctagatacatcc 117
|||||||||||||||||| | |||||||||||||
Sbjct: 82 atgtatctagaactaaaactcgtctagatacatcc 48
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgt 59
|||||||||||||||| ||||||||||
Sbjct: 121 ctactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 acaactatttccggacggagggagta 162
|||| |||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacat 115
|||||||| |||||||||||||| |||| ||||||
Sbjct: 50 ggatgtatgtagaactaaaatacgtctaaatacat 84
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaactaaaatacatctagatacat 115
|||||||||||| ||| |||||| |||||||||||
Sbjct: 40 ggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||| ||||||||||||||||||||
Sbjct: 120 tactccatccgtccgaaaatacttgtc 94
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatg 69
|||||||||||||||| |||||||||||| | ||||||
Sbjct: 2 tactactccctccgtctaaaaatacttgtcctaaaaatg 40
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||| ||||||||||||||||||||
Sbjct: 5 tactccatccgtccgaaaatacttgtc 31
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtc 60
|||||||||||||||||| ||| |||||||
Sbjct: 121 tactactccctccgtccggaaaaacttgtc 92
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 81 ggatgtatctagaact-aaaatacatctagatacatcc 117
|||||||||||||||| ||||| | |||||||||||||
Sbjct: 41 ggatgtatctagaactaaaaatgcgtctagatacatcc 78
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgt 59
||||||||||||||| ||||||||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 acaactatttccggacggagggagta 162
|||| |||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
