miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 172 bits (87), Expect = 7e-43
Identities = 106/111 (95%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 8 tagtactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcg 66
|||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaatataagtatttttagctatgaatctggataactgtgcg 61
Query: 67 ttcagattcatagtccaaagttgttatattttgggacggaggtagtagtta 117
||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcagattcatagccaaaagttgttatattttgggacggaggtagtagtta 112
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa Indica
Group
Length = 112
Score = 135 bits (68), Expect = 1e-31
Identities = 96/104 (92%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||||||||||||| |||||| ||||||||||||||| |||||||||| |
Sbjct: 5 tactccctccgtcccaaaatataatcatttttagctatgaatctggacaactgtgcgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 65 agattcatagccaaaagttgttatattttgggatggaggtagta 108
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 135 bits (68), Expect = 1e-31
Identities = 96/104 (92%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagctatgaatctggacaactgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
| |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 48 aaattcatagccaaaagttgttatattttgggacggaggtagta 5
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa Japonica
Group
Length = 112
Score = 131 bits (66), Expect = 2e-30
Identities = 97/106 (91%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctatgaatctggacaactgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 65 agattcaaagctaaaagttgttatattttgggacggaggtagtagt 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 28 ttatattttgggacggagggagtagt 3
>RF00906;MIR1122;AAAA02007751.1/21104-20995 39946:Oryza sativa
Indica Group
Length = 110
Score = 129 bits (65), Expect = 9e-30
Identities = 96/104 (92%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tactctctccgtcccaaaatataagcatttttagctatgaatctggataactgt--gttc 62
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 63 agattcataactaaaaattgttatattttgggacggaggtagta 106
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 125 bits (63), Expect = 1e-28
Identities = 91/99 (91%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagctatgaatctagataactgtgcgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggagg 108
|||||||||| | |||||||||||||||| |||| ||||
Sbjct: 48 agattcatagccaaaagttgttatattttaggacagagg 10
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 121 bits (61), Expect = 2e-27
Identities = 95/105 (90%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattt-tagctatgaatctggataactgtgcgttc 69
||||| |||||||||||||||||||||||| |||||||||||||||| |||||| || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttctagctatgaatctggacaactgtatgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 48 agattcatagctaaaagttgttatattttaggacggaggtagtag 4
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 119 bits (60), Expect = 9e-27
Identities = 94/104 (90%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagctatgaatctggacaactgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | |||||| ||| |||||||||| |||||||||
Sbjct: 48 agattcatagccaaaagttattacattttgggacagaggtagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 85 ttatattttgggacggagggagtagt 110
>RF00906;MIR1122;AC123568.1/82963-82852 39947:Oryza sativa Japonica
Group
Length = 112
Score = 117 bits (59), Expect = 4e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 18 tccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattca 76
||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 12 tccgtcctaaaatataagcatttttagctatgaatctggataactgtgtgtccagattca 71
Query: 77 tagtccaaagttgttatattttgggacggaggtagtagt 115
|||| ||| || ||||||||||||||| ||||||||||
Sbjct: 72 tagtaaaaaattattatattttgggacgaaggtagtagt 110
>RF00906;MIR1122;AAAA02012175.1/18488-18377 39946:Oryza sativa
Indica Group
Length = 112
Score = 115 bits (58), Expect = 1e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| || |||||||||||||||||||||| |||||||||||||||||| ||| || |
Sbjct: 5 tactcccttcgtcccaaaatataagcatttttagctatgaatctggataattgtatgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
|||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 65 agattcatagctaaaagttgttatattctgggacggaggtagtagt 110
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 115 bits (58), Expect = 1e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagctatgaatctggacaactgtgtgtct 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
||||||| || |||||||||||||||||||||||||||| ||||
Sbjct: 48 agattcaaagctaaaagttgttatattttgggacggaggtaatagt 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 85 ttatattttgggacggagggagtagt 110
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa Japonica
Group
Length = 112
Score = 115 bits (58), Expect = 1e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| || |
Sbjct: 5 tactccctccgtcccaaaatataagcaattttagctatgaatctggacaactgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtag 111
|||| ||||| | ||||| |||||||||||||| ||||||||
Sbjct: 65 agatacatagccaaaagtggttatattttgggatggaggtag 106
>RF00906;MIR1122;AAAA02017212.1/23354-23464 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 5e-25
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattttagctatgaatctggataactgtgcgttca 70
||||| |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 107 tactccctccgtaccaaaatataagtattttagctatgaatctggacaactgtgtgttca 48
Query: 71 gattcatagtccaaagttgttatattttgggacggaggtagtagt 115
||||||||| |||||| ||||||||||| || |||| ||||||
Sbjct: 47 gattcatagctaaaagttattatattttggaacagaggcagtagt 3
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 111 bits (56), Expect = 2e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| || ||||||||||||||| |||| || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagttatgaatctggataattgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 48 agattcatagctaaaagttgttacattttaggacggaggtagta 5
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 111 bits (56), Expect = 2e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| || |||||||||||| ||| || || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttaggtatgaatctggacaacagtatgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | |||||||||| ||||||||||||||||||||
Sbjct: 48 agattcatagccaaaagttgttacattttgggacggaggtagta 5
>RF00906;MIR1122;AACV01006837.1/19056-19167 39947:Oryza sativa
Japonica Group
Length = 112
Score = 111 bits (56), Expect = 2e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||| |||||||||| |||||| |||||||||||||| ||||||| || |
Sbjct: 108 tactccctccgtctcaaaatataaacatttttagctatgaatctgggcaactgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 48 agattcatagccaaaatttgttatattttgggacggaggtagta 5
>RF00906;MIR1122;AACV01013595.1/1278-1389 39947:Oryza sativa
Japonica Group
Length = 112
Score = 111 bits (56), Expect = 2e-24
Identities = 93/104 (89%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||| |||||||||||||||||||| ||||||||||||||| ||| ||| || |
Sbjct: 5 tactccctccatcccaaaatataagcatttttagctatgaatctggacaaccgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||| |||| | ||||||||||||||||||| |||||||||||
Sbjct: 65 agatttatagccaaaagttgttatattttggggcggaggtagta 108
>RF00906;MIR1122;AACV01021941.1/12785-12674 39947:Oryza sativa
Japonica Group
Length = 112
Score = 109 bits (55), Expect = 9e-24
Identities = 83/91 (91%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattc 75
|||||| |||||||||||||||||| ||||||||||||| | ||||||| ||||||||||
Sbjct: 102 ctccgttccaaaatataagcatttttagctatgaatctgaacaactgtgtgttcagattc 43
Query: 76 atagtccaaagttgttatattttgggacgga 106
|||| ||||||||||||||||||||||||
Sbjct: 42 atagctaaaagttgttatattttgggacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 83/99 (83%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 18 tccgtcccaaaatataagca-ttttagctatgaatctggata-actgtgcgttcagattc 75
||||||||||||||||| | ||||||||||||||||| | | || || ||||||||||
Sbjct: 12 tccgtcccaaaatataacaacttttagctatgaatctgaacacacagt-tgttcagattc 70
Query: 76 atagtccaaagttgttatattttgggacggaggtagtag 114
|||| ||| | ||||||||||| |||||||||||||
Sbjct: 71 atagctaaaaatgcttatattttggaacggaggtagtag 109
>RF00906;MIR1122;AAAA02004447.1/3435-3324 39946:Oryza sativa Indica
Group
Length = 112
Score = 109 bits (55), Expect = 9e-24
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 20 cgtcccaaaatataagcatttta-gctatgaatctggataactgtgcgttcagattcata 78
|||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||
Sbjct: 14 cgtcccaaaatataagcattttttgctatgaatctggacaactgtgtgtccagattcata 73
Query: 79 gtccaaagttgttatattttgggacggaggtagta 113
| | ||||||| |||||||||||| ||||||||||
Sbjct: 74 gccaaaagttgctatattttgggatggaggtagta 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||| ||||||||||
Sbjct: 28 ttatattttgggacgaaggtagtagt 3
>RF00906;MIR1122;AAAA02007993.1/45532-45643 39946:Oryza sativa
Indica Group
Length = 112
Score = 107 bits (54), Expect = 3e-23
Identities = 94/106 (88%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||||||||||||||| |||||||||||| ||||| |||| || |
Sbjct: 108 tactccctccgtcctaaaatataagcatttttagctatgaatctagataattgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
||||||||||| ||| || ||||||||||||||| ||||||||||
Sbjct: 48 agattcatagtaaaaaattattatattttgggacgaaggtagtagt 3
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 107 bits (54), Expect = 3e-23
Identities = 94/106 (88%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||| ||||| ||||||||||||| |||| ||| || |
Sbjct: 5 tactccctccgtcccaaaatataagtatttttagctatgaatctgtataattgtatgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
|||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 65 agattcatagctaaaagttgttatattctgggacggaggtagtagt 110
>RF00906;MIR1122;AP008208.1/6008947-6008837 39947:Oryza sativa
Japonica Group
Length = 111
Score = 107 bits (54), Expect = 3e-23
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataagcattttagctatgaatctggataactgtgcgtt 68
||||||| |||| |||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct: 3 agtactccctccatcccaaaatataagcattttggctatgaatctggacaactgtatgtc 62
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagtag 114
| ||| |||| | |||||||||||||||| |||||||||||||||
Sbjct: 63 taaatttatagccaaaagttgttatattttaggacggaggtagtag 108
>RF00906;MIR1122;AP008210.1/8188364-8188253 39947:Oryza sativa
Japonica Group
Length = 112
Score = 107 bits (54), Expect = 3e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagcatttta-gctatgaatctggataactgtgcgttcagattc 75
||||||||||||||||||||||||| ||||||||||| || |||| || || |||||||
Sbjct: 11 ctccgtcccaaaatataagcattttttgctatgaatctagagaactatgtgtccagattc 70
Query: 76 atagtccaaagttgttatattttgggacggaggtagta 113
|||| |||||||||||||||||||||||||||||||
Sbjct: 71 atagctaaaagttgttatattttgggacggaggtagta 108
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
|||||||||||||||||| | |||||||||||||||||||
Sbjct: 102 ctccgtcccaaaatataacaacttttagctatgaatctgga 62
>RF00906;MIR1122;AAAA02020043.1/26999-26890 39946:Oryza sativa
Indica Group
Length = 110
Score = 105 bits (53), Expect = 1e-22
Identities = 93/104 (89%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttta-gctatgaatctggataactgtgcgttc 69
||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||| | |
Sbjct: 5 tactccctccgccccaaaatataagcattttttgctatgaatctggataaccgtg--tcc 62
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 agattcatagctaaaagttgttatattttgggacggaggtagta 106
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
|||||||||||||||||| | |||||||||||||||||||
Sbjct: 100 ctccgtcccaaaatataacaacttttagctatgaatctgga 60
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 105 bits (53), Expect = 1e-22
Identities = 93/105 (88%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||||||||| |||||||||| ||||||||||||||| |||||| | |
Sbjct: 5 tactccctccgtcccaaaatgtaagcatttttagctatgaatctggacaactgtatatcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 65 agattcatagccaaaagttactatattttgggacggaggtagtag 109
>RF00906;MIR1122;AAAA02004570.1/36950-37061 39946:Oryza sativa
Indica Group
Length = 112
Score = 105 bits (53), Expect = 1e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 7 atagtactctctccgtcccaaaatataagcattt-tagctatgaatctggataactgtgc 65
||||||||| || | |||||||||||||| ||| || ||||||||||||| ||||||
Sbjct: 1 atagtactcccttcatcccaaaatataagtattcatatctatgaatctggacaactgtat 60
Query: 66 gttcagattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 61 gttcagattcatagccaaaagttgttatattttgggatggaggtagtag 109
>RF00906;MIR1122;AP008210.1/27511419-27511308 39947:Oryza sativa
Japonica Group
Length = 112
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 18 tccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattca 76
||||||||||||||||| |||||| ||||||||||||||| ||||||| || |||||||
Sbjct: 12 tccgtcccaaaatataaacatttttagctatgaatctggacaactgtgtgtctagattca 71
Query: 77 tagtccaaagttgttatattttgggacggaggtagta 113
||| | ||||| | |||||||||||||||||||||||
Sbjct: 72 tagccaaaagtggctatattttgggacggaggtagta 108
>RF00906;MIR1122;AAAA02009170.1/19955-20066 39946:Oryza sativa
Indica Group
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 108 tactccctccgtctcaaaatataagcatttttagctatgaatctgggcaactgtgtgtct 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||| |||||| ||||||||||||||||||||
Sbjct: 48 agattcatagccaaaatttgttacattttgggacggaggtagta 5
>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
Indica Group
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||| | |||||||||| ||||| |||||||||||||||||||| || || |
Sbjct: 5 tactccctccgttctaaaatataagtatttttagctatgaatctggataactatgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||||||| |||||||| ||||||||||||||
Sbjct: 65 agattcatagccaaaagttgctatatttttggacggaggtagta 108
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| ||||||||||||||| || |||| | |
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctatgaatctggacaaatgtgtatcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
| |||||||| | || |||||||||| |||||||||||||||||
Sbjct: 65 aaattcatagccaaatgttgttatatattgggacggaggtagta 108
>RF00906;MIR1122;AL731876.3/54416-54305 4530:Oryza sativa (rice)
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||| |||| ||||| |||||||||| |||||| |||||||||||||||| || |
Sbjct: 5 tactccctctgtcctaaaatgtaagcatttttagctataaatctggataactgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | |||||||||| ||||| ||||||||||||||
Sbjct: 65 agattcatagccaaaagttgttacattttaggacggaggtagta 108
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||||||||||||| |||||| |||||||||||||||||||| || || |
Sbjct: 108 tactccctccgtcccaaaatataaacatttttagctatgaatctggataactatgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 48 agattcatatctaaaagttgttacattttaggacggaggtagta 5
>RF00906;MIR1122;AACV01013579.1/19751-19640 39947:Oryza sativa
Japonica Group
Length = 112
Score = 103 bits (52), Expect = 5e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||| ||||||||||||||||||||| ||||||||||||||| | | || || |
Sbjct: 5 tactccctctgtcccaaaatataagcatttttagctatgaatctggacagccatgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 65 agatttatagccaaaagttgttatattttgggacggaggtagta 108
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 20 cgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattcata 78
|||||||||||||||||||||| ||||||||||||||| |||||||| | ||||| |||
Sbjct: 14 cgtcccaaaatataagcatttttagctatgaatctggacaactgtgcatcaagatttata 73
Query: 79 gtccaaagttgttatattttgggacggaggtagta 113
| | ||||||| |||||||||||||||||| ||||
Sbjct: 74 gacaaaagttgctatattttgggacggagggagta 108
>RF00906;MIR1122;AAAA02004006.1/11200-11089 39946:Oryza sativa
Indica Group
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 21 gtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattcatag 79
||||||||||||||||||||| ||||||||||||||| ||| ||| || |||||||||||
Sbjct: 15 gtcccaaaatataagcatttttagctatgaatctggacaaccgtgtgtccagattcatag 74
Query: 80 tccaaagttgttatattttgggacggaggtagtag 114
| ||||| | |||||||| |||||||||||||||
Sbjct: 75 ccaaaagtggctatatttttggacggaggtagtag 109
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||||||||| |||||||||| ||||||||||||||| ||| ||| || |
Sbjct: 5 tactccctccgtcccaaaatgtaagcatttttagctatgaatctggacaacagtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagt 112
|||||||||| ||||||| |||||||| |||||||||||||
Sbjct: 65 agattcatagctaaaagttgctatattttaggacggaggtagt 107
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 99.6 bits (50), Expect = 8e-21
Identities = 93/106 (87%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||||||| | |||| ||| | || ||||||| || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttaactataaatatagacaactgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
|||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 48 agattcatagctaaaaattgttatattttgggacggaggtagtagt 3
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctgga 56
|||||||||||||||||| ||||| |||||||||||||||
Sbjct: 11 ctccgtcccaaaatataacaatttttagctatgaatctgga 51
>RF00906;MIR1122;AC133291.2/19841-19952 39947:Oryza sativa Japonica
Group
Length = 112
Score = 99.6 bits (50), Expect = 8e-21
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattc 75
|||||| | |||||||||| ||||| |||||||||||| || ||||||| | |||||||
Sbjct: 102 ctccgttctaaaatataagtatttttagctatgaatctagacaactgtgtatccagattc 43
Query: 76 atagtccaaagttgttatattttgggacggaggtagta 113
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 42 atagtcaaaagttattatattttgggacggaggtagta 5
>RF00906;MIR1122;AP004672.3/95919-95808 39947:Oryza sativa Japonica
Group
Length = 112
Score = 97.6 bits (49), Expect = 3e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 7 atagtactctctccgtcccaaaatataagcattttag-ctatgaatctggataactgtgc 65
||||||||| || |||||||||||||||||||| | ||||||||||||| || |||
Sbjct: 1 atagtactcccttcgtcccaaaatataagcattcatgtctatgaatctggacaattgtat 60
Query: 66 gttcagattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 61 gttcagattcatagctaaaagttgttatattttgggatggaggtagtag 109
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 97.6 bits (49), Expect = 3e-20
Identities = 92/104 (88%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||
Sbjct: 106 tactccctccgtcccaaaatataagtatttttagctatgaatctggataactgt--gttc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||| ||| ||| |||||||||| ||||||||||||
Sbjct: 48 agattcataactaaaaattgctatattttggaacggaggtagta 5
>RF00906;MIR1122;AAAA02018512.1/8556-8445 39946:Oryza sativa Indica
Group
Length = 112
Score = 97.6 bits (49), Expect = 3e-20
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattc 75
|||| |||||||||||||| ||||| |||||| |||||||| |||| ||||| |||||||
Sbjct: 102 ctccatcccaaaatataagtatttttagctataaatctggacaactatgcgtccagattc 43
Query: 76 atagtccaaagttgttatattttgggacggagg 108
|||| | ||||||| ||||||||||||||||||
Sbjct: 42 atagccaaaagttgctatattttgggacggagg 10
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 95.6 bits (48), Expect = 1e-19
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| ||||||||||||||||||| | | || || |
Sbjct: 108 tactccctccgtcccaaaatataagcatttttagctatgaatctggacagccatgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||| |||| | |||||||||| |||||||||||||| |||||
Sbjct: 48 agatttatagccaaaagttgttacattttgggacggagatagta 5
>RF00906;MIR1122;ABRL01000314.1/119-8 65489:Oryza barthii
Length = 112
Score = 95.6 bits (48), Expect = 1e-19
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattttag-ctatgaatctggataactgtgcgttc 69
||||| |||| |||||||||||||||||||| | ||||||| ||||| |||| | || |
Sbjct: 108 tactccctccatcccaaaatataagcatttttggctatgaacctggacaactttatgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 48 agattcatagccaaaagttgttatattttgggacagaggtagta 5
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 93.7 bits (47), Expect = 5e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttcagattc 75
|||||||||||||| |||||||||| |||||||||||| || |||| || |||||| |||
Sbjct: 11 ctccgtcccaaaatgtaagcatttttagctatgaatctagacaactatgtgttcaggttc 70
Query: 76 atagtccaaagttgttatattttgggacggaggtagtag 114
|||| ||||||| |||||||||||||||||| |||||
Sbjct: 71 atagctaaaagttgctatattttgggacggagggagtag 109
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 91.7 bits (46), Expect = 2e-18
Identities = 88/100 (88%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| |||||||||||||||||| || ||| || |
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctatgaatctgg---acagtgtgtcc 61
Query: 70 agattcatagtccaaagttgttatattttgggacggaggt 109
|||||||||| ||||||||||||||||| |||||||||
Sbjct: 62 agattcatagctaaaagttgttatattttgagacggaggt 101
>RF00906;MIR1122;AACV01009917.1/1696-1588 39947:Oryza sativa
Japonica Group
Length = 109
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/104 (87%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| |||||||||||||| |||| ||| ||| || |
Sbjct: 5 tactcactccgtcccaaaatataagcatttttagctatgaatttggacaaccgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||| ||||||||||||||| |||||||||
Sbjct: 65 agattcatagccaaaa---gttatattttgggacagaggtagta 105
>RF00906;MIR1122;AC105363.2/93214-93105 39947:Oryza sativa Japonica
Group
Length = 110
Score = 89.7 bits (45), Expect = 8e-18
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||||||||| ||||| |||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcctaaaatataagtatttttagctatgaatctggataactgt--gttc 62
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||| ||| ||| ||||||||||| |||||||||||
Sbjct: 63 agattcataactaaaaattgctatattttggggcggaggtagta 106
>RF00906;MIR1122;AACV01005190.1/14557-14668 39947:Oryza sativa
Japonica Group
Length = 112
Score = 89.7 bits (45), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgtt 68
|||||| ||||||||||| || |||||||||| |||||||||||| || || |||| ||
Sbjct: 109 gtactccctccgtcccaacatgtaagcatttttagctatgaatctagacaattgtgtgtc 50
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||||| | ||| || |||||||||||||||||||||||
Sbjct: 49 cagattcatagccaaaaattactatattttgggacggaggtagta 5
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 89.7 bits (45), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgtt 68
|||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||| ||
Sbjct: 109 gtactccctccgtcccaaaatataagtatttttagctatgaatctagataactgtatgtc 50
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||| |||| |||||| ||||||| || |||||||||||||
Sbjct: 49 cagattaatagctaaaagttattatattctgagacggaggtagta 5
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa Japonica
Group
Length = 111
Score = 87.7 bits (44), Expect = 3e-17
Identities = 91/104 (87%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| |||||||||||||||||| || ||||||||||||||||||| |||||| || |
Sbjct: 5 tactccctccgtcccaaaatataaacatttttagctatgaatctggacaactgt-tgtcc 63
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | |||||| | | ||||| ||||||||||||||
Sbjct: 64 agattcatagccaaaagttataacatttttggacggaggtagta 107
>RF00906;MIR1122;AC097627.1/66504-66615 4530:Oryza sativa (rice)
Length = 112
Score = 87.7 bits (44), Expect = 3e-17
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattttag-ctatgaatctggataactgtgcgttc 69
||||| |||| |||||||||||||||||||| | ||||||| ||||| |||| | || |
Sbjct: 108 tactccctccatcccaaaatataagcatttttggctatgaacctggacaactttatgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 48 agattcatagctaaaagttgttatattttgggacagaggtagta 5
>RF00906;MIR1122;AP004621.3/94317-94428 39947:Oryza sativa Japonica
Group
Length = 112
Score = 87.7 bits (44), Expect = 3e-17
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||| |||||||||| |||||||||| |||||||||||| || |||||| ||
Sbjct: 5 tactccctctgtcccaaaatgtaagcatttttagctatgaatctagacaactgtttgtct 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||| ||| | ||||| |||||||||||||||||||||||||
Sbjct: 65 agattcgtagccaaaagtggttatattttgggacggaggtagta 108
>RF00906;MIR1122;AACV01005176.1/8457-8346 39947:Oryza sativa
Japonica Group
Length = 112
Score = 87.7 bits (44), Expect = 3e-17
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||||||||| ||||| || |||||||||||| ||||||| | |
Sbjct: 5 tactccctccgtcctaaaatataagtatttttagttatgaatctggacaactgtgtatcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
| ||| |||| | |||||||||||||||| ||||||||||||||
Sbjct: 65 acatttatagccaaaagttgttatattttaggacggaggtagta 108
>RF00906;MIR1122;AC129719.2/18417-18306 39947:Oryza sativa Japonica
Group
Length = 112
Score = 87.7 bits (44), Expect = 3e-17
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 25 caaaatataagcatt-ttagctatgaatctggataactgtgcgttcagattcatagtcca 83
||||||||||||||| ||| |||||||||||| |||| || || ||||||||||| | |
Sbjct: 19 caaaatataagcattgttaattatgaatctggacaactatgtgtccagattcatagccaa 78
Query: 84 aagttgttatattttgggacggaggtagtagt 115
|| |||||||||||||||||||||||| ||||
Sbjct: 79 aaattgttatattttgggacggaggtactagt 110
>RF00906;MIR1122;AC097175.2/115469-115358 39947:Oryza sativa
Japonica Group
Length = 112
Score = 81.8 bits (41), Expect = 2e-15
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgtt 68
|||||| |||||| ||||||||||||||||| |||||||||||| || ||||||| |
Sbjct: 109 gtactccctccgtttcaaaatataagcatttttagctatgaatctagacaactgtgtatc 50
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||||| ||||| | |||||||| ||||||||||||||
Sbjct: 49 cagattcatagctaaaagtggctatattttaggacggaggtagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctggata 58
|||||||| |||||||| || |||||||||||||||||||||
Sbjct: 11 ctccgtcctaaaatatagccacttttagctatgaatctggata 53
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| |||||||| ||||||| || ||| || ||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctttgaatctagacaaccatgtgtct 64
Query: 70 agattcatagtccaaagttgttatattttgggacgga 106
|||||||||| ||||||||||||||||||||||||
Sbjct: 65 agattcatagctaaaagttgttatattttgggacgga 101
>RF00906;MIR1122;AP008214.1/27846174-27846285 39947:Oryza sativa
Japonica Group
Length = 112
Score = 79.8 bits (40), Expect = 8e-15
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcattt-tagctatgaatctggataactgtgcgttc 69
||||| ||| |||||||||||||||||||| | | |||||||||||| ||| || || |
Sbjct: 5 tactccctctgtcccaaaatataagcatttctggttatgaatctggacaaccgtaagtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | ||| || |||||||||||||||||||||||
Sbjct: 65 agattcatagccaaaaactgctatattttgggacggaggtagta 108
>RF00906;MIR1122;AAAA02032490.1/12014-11907 39946:Oryza sativa
Indica Group
Length = 108
Score = 77.8 bits (39), Expect = 3e-14
Identities = 89/104 (85%), Gaps = 5/104 (4%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| || |||||||||||||||||| ||||||||||||||||||| | || || |
Sbjct: 5 tactcccttcgtcccaaaatataagcatttttagctatgaatctggaca----tgtgtcc 60
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 61 agattcatagctaaaagttgttacattttgggatggaggtagta 104
>RF00906;MIR1122;AACV01007111.1/2148-2260 39947:Oryza sativa
Japonica Group
Length = 113
Score = 77.8 bits (39), Expect = 3e-14
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 18 tccgtcccaaaatataagcattt--tagctatgaatctggataactgtgcgttcagattc 75
||||||||||||||||||||||| |||||||||||||| | |||| || || ||||||
Sbjct: 12 tccgtcccaaaatataagcattttctagctatgaatctgaacaactatgtgtctagattc 71
Query: 76 atagtccaaagttgttatattttgggacggaggtagta 113
||| ||||||| |||||||||||||||| ||||||
Sbjct: 72 ataactaaaagttgctatattttgggacggatgtagta 109
>RF00906;MIR1122;AC130607.2/121928-122037 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 90/105 (85%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| ||||||| |||||| |||||||||| |||||||||||| || ||| ||| | |
Sbjct: 5 tactccctccgtctcaaaatgtaagcatttttagctatgaatctagacaaccgtg--tcc 62
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||| ||| ||||| ||||||||||||||||||||||||||
Sbjct: 63 agattcgtagctaaaagtggttatattttgggacggaggtagtag 107
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
|||||||||||||||||| || ||||||||| |||||||||
Sbjct: 100 ctccgtcccaaaatataaccacttttagctacgaatctgga 60
>RF00906;MIR1122;AAAA02015448.1/20736-20847 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 90/106 (84%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||| ||||||||||| |||||| |||||| ||||| || |||| | |||
Sbjct: 108 tactccctccgttccaaaatataaacatttttagctataaatctagacaactatatgttt 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagt 115
|||||||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 48 agattcatagctaaaaattgttatattttaggacggaggtagtagt 3
>RF00906;MIR1122;AAAA02021832.1/90208-90105 39946:Oryza sativa
Indica Group
Length = 104
Score = 73.8 bits (37), Expect = 5e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtg 64
||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||
Sbjct: 102 agtactccctccgtcctaaaatataagcatttttagctatgaatctggacaactgtg 46
>RF00906;MIR1122;AAAA02015795.1/16369-16480 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 5e-13
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||| ||||||||| |||| ||||| ||||||||||||||| | ||||| | |
Sbjct: 5 tactccctccatcccaaaatgtaagtatttttagctatgaatctggacatctgtgtatcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| ||| ||| ||||||||||||||||||| ||||
Sbjct: 65 agattcatagctaaaaattgctatattttgggacggaggtggtag 109
Score = 50.1 bits (25), Expect = 7e-06
Identities = 41/44 (93%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca--ttttagctatgaatctggata 58
||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 102 ctccgtcccaaaatata-gcaatttttagctatgaatctggata 60
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 5e-13
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| ||||||||||||||||||||| |||||||| ||||||| || |||| | ||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctttgaatctagacaactatatgtct 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| ||||||| |||||||| ||||||| |||||||
Sbjct: 65 agattcatagctaaaagttgctatattttaggacggatgtagtag 109
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 66 gttcagattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 63 gttcagattcatagccaaaagttgttatattttgggacggagggagtag 111
Score = 54.0 bits (27), Expect = 4e-07
Identities = 88/106 (83%), Gaps = 3/106 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggata--actgtgcgt 67
||||| |||||||||||||||||| | |||| |||||||||||| | | ||| || ||
Sbjct: 110 tactccctccgtcccaaaatataacaacttttggctatgaatctgaacactactatgtgt 51
Query: 68 tcagattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 50 ccagattcatagctaaaagttgttatattttagaatggaggtagta 5
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 87/104 (83%), Gaps = 6/104 (5%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattttagctatgaatctggataactgtgcgttca 70
||||| ||| |||||||||||||||| |||| ||||||| | ||||||| || ||
Sbjct: 101 tactccctcagtcccaaaatataagcgtttt------gaatctgaacaactgtgtgtcca 48
Query: 71 gattcatagtccaaagttgttatattttgggacggaggtagtag 114
||||||||| | ||||||| |||||||||||||||||| |||||
Sbjct: 47 gattcatagccaaaagttgctatattttgggacggagggagtag 4
>RF00906;MIR1122;AP004339.3/80660-80546 39947:Oryza sativa Japonica
Group
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctggataact---gtgcgttcaga 72
|||||||||||||||||| |||||| |||||| ||| |||| ||| ||| || ||||
Sbjct: 105 ctccgtcccaaaatataaacatttttagctataaatttggacaacaaccgtgtgtccaga 46
Query: 73 ttcatagtccaaagttgttatattttgggacggaggta 110
||||||| ||||||||||||||||||||||||||||
Sbjct: 45 ttcatagctaaaagttgttatattttgggacggaggta 8
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
|||||||||||||||||| | |||||||||||||||||||
Sbjct: 11 ctccgtcccaaaatataacaacttttagctatgaatctgga 51
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 88 ttatattttgggacggaggaagtagt 113
>RF00906;MIR1122;AP003928.3/87481-87370 39947:Oryza sativa Japonica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||||||||| ||||| | |||||||||| || |||| || || |
Sbjct: 108 tactccctccgtcctaaaatataagtatttttacctatgaatctagacaactatgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| | | |||||||||||| | | ||||||||||||
Sbjct: 48 agattcatagccaatagttgttatattctagaacggaggtagta 5
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 10 gtactctctccgtcccaaaatataagcattt-tagctatgaatctgga 56
||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 4 gtactctctccgtcccaaaatataagcatttctagctacgaatctgga 51
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagcattt 40
|||||| ||||||||||||||||||||||||
Sbjct: 92 gtactccctccgtcccaaaatataagcattt 62
>RF00906;MIR1122;AP008217.1/6570444-6570554 39947:Oryza sativa
Japonica Group
Length = 111
Score = 69.9 bits (35), Expect = 7e-12
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcattttagctatgaatctggataactgtgcgttca 70
||||| |||||||| ||||| |||| |||||||||||||| |||| | | || || ||
Sbjct: 5 tactccctccgtcctaaaatgtaagatttttagctatgaatttggacacgtatgtgtcca 64
Query: 71 gattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 65 gattcatagctaaaaattgctatattttgggacggaggtagta 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca--ttttagctatgaatctgga 56
||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 101 ctccgtcccaaaatata-gcaatttttagctatgaatctgga 61
>RF00906;MIR1122;AACV01022357.1/4100-4210 39947:Oryza sativa
Japonica Group
Length = 111
Score = 69.9 bits (35), Expect = 7e-12
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 18 tccgtcccaaaatataagca-ttttagctatgaatctggataactgt 63
|||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 100 tccgtcccaaaatataagcatttttagctatgaatctggacaactgt 54
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 69.9 bits (35), Expect = 7e-12
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctatgaatctgga 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagta 113
||||| ||||||||||||||||||||||||
Sbjct: 67 aagttattatattttgggacggaggtagta 96
>RF00906;MIR1122;AP008209.1/10169478-10169587 39947:Oryza sativa
Japonica Group
Length = 110
Score = 67.9 bits (34), Expect = 3e-11
Identities = 80/93 (86%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttcagattc 75
||||||||||| |||||| | |||| |||||||||||||| ||| ||| | |||||||
Sbjct: 11 ctccgtcccaacatataacaacttttggctatgaatctggacaaccgtg--tccagattc 68
Query: 76 atagtccaaagttgttatattttgggacggagg 108
|||| | ||||||||||||| ||||||||||||
Sbjct: 69 atagccaaaagttgttatatgttgggacggagg 101
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagt 112
||||||||||| | ||||||||||||| ||||||||||||||||
Sbjct: 49 cagattcatagccaaaagttgttatatgttgggacggaggtagt 6
>RF00906;MIR1122;AC137634.3/117087-116978 39947:Oryza sativa
Japonica Group
Length = 110
Score = 67.9 bits (34), Expect = 3e-11
Identities = 80/93 (86%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttcagattc 75
||||||||||| |||||| | |||| |||||||||||||| ||| ||| | |||||||
Sbjct: 100 ctccgtcccaacatataacaacttttggctatgaatctggacaaccgtg--tccagattc 43
Query: 76 atagtccaaagttgttatattttgggacggagg 108
|||| | ||||||||||||| ||||||||||||
Sbjct: 42 atagccaaaagttgttatatgttgggacggagg 10
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagt 112
||||||||||| | ||||||||||||| ||||||||||||||||
Sbjct: 62 cagattcatagccaaaagttgttatatgttgggacggaggtagt 105
>RF00906;MIR1122;AP008213.1/16335065-16334954 39947:Oryza sativa
Japonica Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 88/105 (83%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||| |||||||||| ||||||||||||||| | |||| || |
Sbjct: 108 tactccctccgtcctaaaaagtaagcatttttagctatgaatctggacacttgtgtgtcc 49
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 48 agattcatagctaaaaatgactatattttgggacggaggtagtag 4
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctgga 56
||||||||||||||||| |||||| |||||||||||||||
Sbjct: 11 ctccgtcccaaaatatagtcatttttagctatgaatctgga 51
>RF00906;MIR1122;AACV01016108.1/6300-6411 39947:Oryza sativa
Japonica Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 88/105 (83%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||||||| |||| |||||||||| ||||||||||||||| | |||| || |
Sbjct: 5 tactccctccgtcctaaaaagtaagcatttttagctatgaatctggacacttgtgtgtcc 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 65 agattcatagctaaaaatgactatattttgggacggaggtagtag 109
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctgga 56
||||||||||||||||| |||||| |||||||||||||||
Sbjct: 102 ctccgtcccaaaatatagtcatttttagctatgaatctgga 62
>RF00906;MIR1122;AP005569.2/105921-105796 39947:Oryza sativa
Japonica Group
Length = 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 116 ctccgtcccaaaatataagcatttttagctatgaatctgga 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 18 tccgtcccaaaatataagca-ttttagctatgaat 51
|||||||||||||||||||| ||||||||||||||
Sbjct: 12 tccgtcccaaaatataagcatttttagctatgaat 46
>RF00906;MIR1122;AP008208.1/16739175-16739286 39947:Oryza sativa
Japonica Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 87/104 (83%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcattt-tagctatgaatctggataactgtgcgttc 69
||||| || ||||||||||||||||||||| |||||||||||||||| | | || ||
Sbjct: 5 tactcccttcgtcccaaaatataagcatttctagctatgaatctggacacccatgtgtct 64
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| ||| ||| |||||||||| | ||||||||||
Sbjct: 65 agattcatagctaaaaattgctatattttggaatggaggtagta 108
>RF00906;MIR1122;AAAA02035863.1/20568-20679 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgt 63
||||||| |||||||| |||||||||| ||||| ||||||||||||||| ||||||
Sbjct: 3 agtactccctccgtcctaaaatataagtatttttagctatgaatctggacaactgt 58
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 63.9 bits (32), Expect = 5e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataagca-ttttagctatgaat 51
||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataagcatttttagctatgaat 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 21 gtcccaaaatataagcatttt-agctatgaatctgga 56
|||||||||||||| |||||| |||||||||||||||
Sbjct: 90 gtcccaaaatataaacatttttagctatgaatctgga 54
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 63.9 bits (32), Expect = 5e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataagca-ttttagctatgaat 51
||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 102 agtactccctccgtcccaaaatataagcatttttagctatgaat 59
Score = 58.0 bits (29), Expect = 3e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 21 gtcccaaaatataagca-ttttagctatgaatctgga 56
||||||||||||||||| |||||||||||||||||||
Sbjct: 15 gtcccaaaatataagcatttttagctatgaatctgga 51
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 63.9 bits (32), Expect = 5e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatct 53
||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctatgaatct 48
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa Indica
Group
Length = 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 87/104 (83%), Gaps = 5/104 (4%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttc 69
||||| |||||||||||||||||| || ||||||||||||||| || ||||| |||
Sbjct: 5 tactccctccgtcccaaaatataatcatttttagctatgaatc----tacctgtgtgttt 60
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
||||| |||| ||| || |||||||||| |||||||||||||
Sbjct: 61 agatttatagctaaaaattattatattttgagacggaggtagta 104
>RF00906;MIR1122;AAAA02000488.1/65172-65284 39946:Oryza sativa
Indica Group
Length = 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 25 caaaatataagcattttagct-atgaatctggata-actgtgcgttcagattcatagtcc 82
||||||||||||||||| | | ||||||||||| | |||||| || ||||||||||| |
Sbjct: 19 caaaatataagcatttttggttatgaatctggacacactgtgtgtccagattcatagaca 78
Query: 83 aaagttgttatattttgggacggaggtagtagtta 117
||| | ||||||||||||||||| | ||||||||
Sbjct: 79 aaaatgcttatattttgggacggatggagtagtta 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 18 tccgtcccaaaatataagcattttag-ctatgaatctgga 56
|||||||||||||||||||||||| | |||||||||||||
Sbjct: 102 tccgtcccaaaatataagcatttttgtctatgaatctgga 63
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa Indica
Group
Length = 92
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||||||||||||||||
Sbjct: 58 aaagttgttatattttgggacggaggtagta 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataagca-ttttagctatgaatct 53
||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataaatatttttagctatgaatct 48
>RF00906;MIR1122;AP008215.1/20036672-20036557 39947:Oryza sativa
Japonica Group
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtagtt 116
|||||| ||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 69 agattcgtagccaaaagtggttatattttgggacggaggtagtagtt 115
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||||||||||||||||
Sbjct: 45 aaagttgttatattttgggacggaggtagta 75
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||||||||||| ||||
Sbjct: 35 aaagttgttatattttgggacggagggagta 5
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 126 tactccctccgtcccaaaatataagcatttttaactatgaatctgga 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 11 ctccgtcccaaaatataagcatttttaactatgaatctgga 51
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 49 cagattcatagttaaaaatgcttatattttgggacggaggtagta 5
>RF00906;MIR1122;AACV01018440.1/8398-8301 39947:Oryza sativa
Japonica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattt-tagctatgaatctgga 56
||||| |||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 94 tactccctccgtcccaaaatgtaagcatttctagctatgaatctgga 48
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| |||||||||||||||||||||| || |||||
Sbjct: 48 agattcatagctaaaagttgttatattttgggacgaagatagta 5
>RF00906;MIR1122;AACV01018933.1/19448-19565 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagtag 114
|||||||||||||||||||||||||||||||
Sbjct: 85 aagttgttatattttgggacggaggtagtag 115
>RF00906;MIR1122;AACV01002938.1/10208-10316 39947:Oryza sativa
Japonica Group
Length = 109
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||||||||||||||||
Sbjct: 35 aaagttgttatattttgggacggaggtagta 5
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||| |||||||| |||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatataagcatttttagctatgaatctgga 51
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctg 54
||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 96 tactccctccgtcccaaaatataagtatttttagctatgaatctg 52
>RF00906;MIR1122;AC108498.2/94665-94556 39947:Oryza sativa Japonica
Group
Length = 110
Score = 60.0 bits (30), Expect = 7e-09
Identities = 88/105 (83%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctggataactgtgcgttc 69
||||| |||| ||||||||| |||| ||||| ||||||||||||||| | |||| | |
Sbjct: 5 tactccctccatcccaaaatgtaagtatttttagctatgaatctggacatctgta--tcc 62
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||||||| ||| ||| ||||||||||||||||||| ||||
Sbjct: 63 agattcatagctaaaaattgctatattttgggacggaggtggtag 107
Score = 50.1 bits (25), Expect = 7e-06
Identities = 41/44 (93%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca--ttttagctatgaatctggata 58
||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 100 ctccgtcccaaaatata-gcaatttttagctatgaatctggata 58
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagc-attttagctatgaatctggataactgtgcgtt 68
|||||| |||||||||||||||||||| |||||||||||||||| | |||| || ||
Sbjct: 109 gtactccctccgtcccaaaatataagcttttttagctatgaatcttggcaactatgtgtc 50
Query: 69 cagattcata 78
||||||||||
Sbjct: 49 cagattcata 40
>RF00906;MIR1122;AC126221.2/108213-108069 39947:Oryza sativa
Japonica Group
Length = 145
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctgga 56
|||||||||||||| |||||| |||||||||||||||||||
Sbjct: 11 ctccgtcccaaaatgtaagcatttttagctatgaatctgga 51
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt-agctatgaatctgga 56
|||||||||||||| ||| |||||| |||||||||||||||
Sbjct: 135 ctccgtcccaaaatgtaaacatttttagctatgaatctgga 95
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 48/52 (92%), Gaps = 3/52 (5%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctggataact 61
||||| ||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 86 tactccctccgtcccaaaatataagcatttttagcta--aatctggataact 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||| ||||||| ||||
Sbjct: 35 aaagttgttatattttggaacggaggcagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 63 ttatattttgggacggagggagtagt 88
>RF00906;MIR1122;AACV01006396.1/8045-7936 39947:Oryza sativa
Japonica Group
Length = 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagt 112
|||||| |||| | ||||||||||||| ||||||||||||||||
Sbjct: 62 cagattgatagccaaaagttgttatatgttgggacggaggtagt 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 78/93 (83%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatctggataactgtgcgttcagattc 75
||||||||||| |||||| | |||| ||||| |||||||| ||| ||| | ||||||
Sbjct: 100 ctccgtcccaacatataacaacttttggctatcaatctggacaaccgtg--tccagatta 43
Query: 76 atagtccaaagttgttatattttgggacggagg 108
||||| ||||| |||||||| ||||||||||||
Sbjct: 42 atagtacaaagctgttatatgttgggacggagg 10
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatct 53
||||| ||||||||||||||||||||| |||||||||| |||||
Sbjct: 124 tactccctccgtcccaaaatataagcatttttagctataaatct 81
>RF00906;MIR1122;AC087553.3/95101-95202 39947:Oryza sativa Japonica
Group
Length = 102
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||| ||| | ||||| |||||||||||||||||||||||||
Sbjct: 55 agattcgtagccaaaagtggttatattttgggacggaggtagta 98
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa Indica
Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 82 caaagttgttatattttgggacggaggtagta 113
||||||||||||||||||||||||||| ||||
Sbjct: 36 caaagttgttatattttgggacggagggagta 5
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataagcatttt 41
|||||| |||||||||||||||||||||||||
Sbjct: 131 gtactccctccgtcccaaaatataagcatttt 100
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||| |||||||||||||||||| || |||||||||| ||||||||
Sbjct: 130 tactccctccgtcccaaaatataaacatttttagctataaatctgga 84
>RF00906;MIR1122;ABRL01000517.1/1415-1326 65489:Oryza barthii
Length = 90
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
|||||||||||||||||||||| ||||||||
Sbjct: 35 aaagttgttatattttgggacgaaggtagta 5
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatctgga 56
||||| |||||||||||||||||| || |||||||||| ||||||||
Sbjct: 130 tactccctccgtcccaaaatataaacatttttagctataaatctgga 84
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 54.0 bits (27), Expect = 4e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcattt-tagctatg 48
||||| |||||||||||||||||||||||| ||||||||
Sbjct: 92 tactccctccgtcccaaaatataagcatttctagctatg 54
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctgga 56
||||| |||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaatgtaagtatttttagctatgaatctgga 55
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt 41
||||| |||||||||||||||||||||||||
Sbjct: 92 tactccctccgtcccaaaatataagcatttt 62
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagcatttt-agctatgaatctgga 56
||||| |||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaatgtaagtatttttagctatgaatctgga 55
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagca-ttttagctatgaatct 53
||||| |||||| | |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgttctaaaatataagcatttttagctatgaatct 48
>RF00906;MIR1122;AAAA02030656.1/4636-4541 39946:Oryza sativa Indica
Group
Length = 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagtag 114
|||||| |||| | |||||||||||||||||| ||||||| |||||
Sbjct: 48 cagatttatagacaaaagttgttatattttggaacggagggagtag 93
>RF00906;MIR1122;AC068950.11/1098-1027 39947:Oryza sativa Japonica
Group
Length = 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||||||||||
Sbjct: 45 ttatattttgggacggaggtagtagt 70
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 gtactctctccgtcccaaaatataagcattttag 43
||||||||||||||||| |||||||| |||||||
Sbjct: 4 gtactctctccgtcccataatataagaattttag 37
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagtagtt 116
||||||| |||||||||||||||||| |||||||
Sbjct: 35 aaagttgctatattttgggacggagggagtagtt 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||| |||||||||||||||||| ||||
Sbjct: 115 aaagttgctatattttgggacggagggagta 145
>RF00906;MIR1122;AP008210.1/30933575-30933686 39947:Oryza sativa
Japonica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 84 aagttgttatattttgggacggaggtagta 113
|||||| |||||||||||||||||||||||
Sbjct: 34 aagttgctatattttgggacggaggtagta 5
>RF00906;MIR1122;AP004753.3/112131-112230 39947:Oryza sativa
Japonica Group
Length = 100
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagta 113
|||||||||||||| |||||||||||||||
Sbjct: 67 aagttgttatatttggggacggaggtagta 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||| |||||||| ||||||||||||||
Sbjct: 35 aaagttgctatattttaggacggaggtagta 5
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagtagtta 117
||||| ||||||||||||||||||| ||||||||
Sbjct: 90 aagttcttatattttgggacggagggagtagtta 123
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagtagtt 116
|||||||||||||||||||||| |||||||
Sbjct: 89 ttgttatattttgggacggagggagtagtt 118
>RF00906;MIR1122;AACV01003201.1/17510-17416 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 7e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 20 cgtcccaaaatataagca-ttttagctatgaatctgg 55
||||| |||||||||||| ||||||||||||||||||
Sbjct: 14 cgtcctaaaatataagcatttttagctatgaatctgg 50
>RF00906;MIR1122;AP002901.2/60176-60097 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagcatttt 41
|||||||||||||||||||||||||
Sbjct: 70 ctccgtcccaaaatataagcatttt 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtag 114
|||||||||||||||||||||||||
Sbjct: 53 ttatattttgggacggaggtagtag 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 atagtactctctccgtcccaaaatataagca 37
||||||||| |||||||| ||||||||||||
Sbjct: 1 atagtactccctccgtcctaaaatataagca 31
>RF00906;MIR1122;AP005830.4/102931-103039 39947:Oryza sativa
Japonica Group
Length = 109
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 tatattttgggacggaggtagtagt 115
|||||||||||||||||||||||||
Sbjct: 83 tatattttgggacggaggtagtagt 107
>RF00906;MIR1122;AP008218.1/6871224-6871113 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 49 cagattcatagctaaaaattgctatattttgggacggaggtagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/41 (92%), Gaps = 3/41 (7%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca--ttttagctatgaatctgg 55
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 11 ctccgtcccaaaatata-gcaatttttagctatgaatctgg 50
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatata 33
|||||||||||||||||||||||||
Sbjct: 3 agtactctctccgtcccaaaatata 27
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggagg 108
||||||||||||||||||||||
Sbjct: 126 ttgttatattttgggacggagg 147
>RF00906;MIR1122;AAAA02024386.1/33092-33187 39946:Oryza sativa
Indica Group
Length = 96
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 83 aaagttgttatattttgggacggaggtag 111
||||||| |||||||||||||||||||||
Sbjct: 62 aaagttgctatattttgggacggaggtag 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||| ||||||||||||||||| |||||
Sbjct: 35 aaagttgctatattttgggacggagatagta 5
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AP008217.1/17152537-17152413 39947:Oryza sativa
Japonica Group
Length = 125
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AC217198.1/129397-129553 4537:Oryza punctata
Length = 157
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 77 tagtccaaagttgttatattttgggacggaggtagta 113
|||||| |||||| |||||||| ||||||||||||||
Sbjct: 41 tagtcctaagttgctatattttaggacggaggtagta 5
>RF00906;MIR1122;AK243439.1/1155-1266 39947:Oryza sativa Japonica
Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 69 cagattcatagtccaaagttgttatattttgggacggaggtagta 113
||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 64 cagattcatagctaaaaattgctatattttgggacggaggtagta 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/41 (92%), Gaps = 3/41 (7%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca--ttttagctatgaatctgg 55
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 102 ctccgtcccaaaatata-gcaatttttagctatgaatctgg 63
>RF00906;MIR1122;AP008214.1/28333305-28333193 39947:Oryza sativa
Japonica Group
Length = 113
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 91 tatattttgggacggaggtagtagt 115
|||||||||||||||||||||||||
Sbjct: 27 tatattttgggacggaggtagtagt 3
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagtag 114
|||||||||||||||||||||| |||||
Sbjct: 89 ttgttatattttgggacggagggagtag 116
>RF00906;MIR1122;AAAA02007746.1/10226-10342 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 tagtactctctccgtcccaaaatataag 35
||||||||| ||||||||||||||||||
Sbjct: 116 tagtactctgtccgtcccaaaatataag 89
>RF00906;MIR1122;AAAA02013867.1/52-181 39946:Oryza sativa Indica
Group
Length = 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagtagtta 117
||||||||||||| ||||||||| ||||||||
Sbjct: 99 gttgttatattttaggacggagggagtagtta 130
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 78 agtccaaagttgttatattttgggacggaggtagta 113
||||| |||||| |||||||| ||||||||||||||
Sbjct: 40 agtcctaagttgctatattttaggacggaggtagta 5
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagtag 114
|||||||||||||||||||||| |||||
Sbjct: 94 ttgttatattttgggacggagggagtag 121
>RF00906;MIR1122;AP004556.3/98434-98589 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 81 ccaaagttgttatattttgggacggaggtagtagtt 116
||||||||||||||||||||||| || | |||||||
Sbjct: 37 ccaaagttgttatattttgggacagaaggagtagtt 2
>RF00906;MIR1122;AAAA02005256.1/11994-12118 39946:Oryza sativa
Indica Group
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 tatattttgggacggaggtagtag 114
||||||||||||||||||||||||
Sbjct: 99 tatattttgggacggaggtagtag 122
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 70 agattcatagtccaaagttgttatattttgggacggaggtagta 113
|||||||||| ||||||| |||||||||||||||||| ||||
Sbjct: 65 agattcatagctaaaagttgctatattttgggacggagggagta 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/45 (91%), Gaps = 3/45 (6%)
Strand = Plus / Minus
Query: 11 tactctctccgtcccaaaatataagca--ttttagctatgaatct 53
||||| |||||||||||||||| |||| ||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatat-agcaacttttagctatgaatct 65
>RF00906;MIR1122;AAAA02005583.1/44128-44034 39946:Oryza sativa
Indica Group
Length = 95
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 tatattttgggacggaggtagtag 114
||||||||||||||||||||||||
Sbjct: 69 tatattttgggacggaggtagtag 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatct 53
||||||||||||||||||| | |||||||||| |||||
Sbjct: 11 ctccgtcccaaaatataagtatttttagctataaatct 48
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtagta 113
||||||||||||||||||||||||
Sbjct: 28 ttatattttgggacggaggtagta 5
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagtag 114
|||||||||||||||||||||| |||||
Sbjct: 70 ttgttatattttgggacggagggagtag 97
>RF00906;MIR1122;AP008213.1/29571801-29571647 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagta 113
|||| |||||||||||||||||||||||
Sbjct: 124 gttgctatattttgggacggaggtagta 151
>RF00906;MIR1122;AAAA02008383.1/30246-30167 39946:Oryza sativa
Indica Group
Length = 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagta 113
|||||||||| |||||||||||||||||
Sbjct: 49 gttgttatatgttgggacggaggtagta 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||||||||| |||||||||||| ||||
Sbjct: 35 aaagttgttatatgttgggacggagggagta 5
>RF00906;MIR1122;AACV01018660.1/8916-9023 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagta 113
||||||||||||||||||||||||
Sbjct: 81 ttatattttgggacggaggtagta 104
>RF00906;MIR1122;AACV01012521.1/1719-1614 39947:Oryza sativa
Japonica Group
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagta 113
|||| |||||||||||||||||||||||
Sbjct: 75 gttgctatattttgggacggaggtagta 102
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagtt 116
||||||||||||||||||| |||||||
Sbjct: 66 ttatattttgggacggagggagtagtt 92
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 attttgggacggaggtagtagtt 116
|||||||||||||||||||||||
Sbjct: 112 attttgggacggaggtagtagtt 134
>RF00906;MIR1122;AAAA02028139.1/7262-7148 39946:Oryza sativa Indica
Group
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggagg 108
|||||||||||||||||||||||
Sbjct: 84 gttgttatattttgggacggagg 106
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagtt 116
||||||| |||||||||||||||||||
Sbjct: 65 ttatattatgggacggaggtagtagtt 91
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataag 35
||||||| |||||||||||||||||||
Sbjct: 133 agtactccctccgtcccaaaatataag 107
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataag 35
||||||| |||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AACV01000413.1/31680-31766 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 tatattttgggacggaggtagta 113
|||||||||||||||||||||||
Sbjct: 61 tatattttgggacggaggtagta 83
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa Indica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtagtagtt 116
||||||||||||||||||| |||||||
Sbjct: 28 ttatattttgggacggagggagtagtt 2
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 87 ttgttatattttgggacggaggtagta 113
|||||||||||||||||||||| ||||
Sbjct: 31 ttgttatattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataag 35
||||||| |||||||||||||||||||
Sbjct: 111 agtactccctccgtcccaaaatataag 85
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataag 35
||||||| |||||||||||||||||||
Sbjct: 118 agtactccctccgtcccaaaatataag 92
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||||||||||||| |||||||| ||||
Sbjct: 35 aaagttgttatattttgagacggagggagta 5
>RF00906;MIR1122;AP005510.3/22168-22263 39947:Oryza sativa
Japonica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatataagcatttt 41
||||| |||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaatgtaagcatttt 35
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagta 113
||||||| |||||||||| ||||||||||||
Sbjct: 35 aaagttgctatattttggcacggaggtagta 5
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagtt 116
||||||||||||||||||| |||||||
Sbjct: 120 ttatattttgggacggagggagtagtt 146
>RF00906;MIR1122;BX000499.1/44774-44875 4530:Oryza sativa (rice)
Length = 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactctctccgtcccaaaatata 33
|||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatata 27
>RF00906;MIR1122;AP008213.1/15559796-15559689 39947:Oryza sativa
Japonica Group
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagta 113
|||||||||||||||||||||| ||||
Sbjct: 78 ttgttatattttgggacggagggagta 104
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaatataag 35
||||||| |||||||||||||||||||
Sbjct: 155 agtactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa Japonica
Group
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 tatattttgggacggaggtagta 113
|||||||||||||||||||||||
Sbjct: 58 tatattttgggacggaggtagta 80
>RF00906;MIR1122;AACV01000380.1/14892-14782 39947:Oryza sativa
Japonica Group
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 87 ttgttatattttgggacggaggtagta 113
||||||||||||||||| |||||||||
Sbjct: 31 ttgttatattttgggacagaggtagta 5
>RF00906;MIR1122;AC107206.4/43527-43372 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 83 aaagttgttatattttgggacggaggtagtagtta 117
||||||| |||||||||||| ||||| ||||||||
Sbjct: 35 aaagttgctatattttgggatggagggagtagtta 1
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 tattttgggacggaggtagtag 114
||||||||||||||||||||||
Sbjct: 223 tattttgggacggaggtagtag 244
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 tattttgggacggaggtagtag 114
||||||||||||||||||||||
Sbjct: 219 tattttgggacggaggtagtag 240
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 93 tattttgggacggaggtagtag 114
||||||||||||||||||||||
Sbjct: 22 tattttgggacggaggtagtag 1
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 tattttgggacggaggtagtag 114
||||||||||||||||||||||
Sbjct: 86 tattttgggacggaggtagtag 107
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 agtactctctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 133 agtactctctccgtcccaaaat 112
>RF00906;MIR1122;AC231808.2/23061-22936 63629:Oryza minuta
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtag 111
||||||||||||||||||||||
Sbjct: 28 ttatattttgggacggaggtag 7
>RF00906;MIR1122;AAAA02009787.1/33052-32959 39946:Oryza sativa
Indica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||| ||||||||||||||||||
Sbjct: 67 ttatattatgggacggaggtagtagt 92
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatct 53
||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 11 ctccgtctcaaaatataagcatttttaactatgaatct 48
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactctctccgtcccaaaatataag 35
|||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AC103550.13/157873-158003 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 attttgggacggaggtagtagt 115
||||||||||||||||||||||
Sbjct: 108 attttgggacggaggtagtagt 129
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 84 aagttgttatattttgggacggaggtagta 113
|||||| |||||||| ||||||||||||||
Sbjct: 34 aagttgctatattttaggacggaggtagta 5
>RF00906;MIR1122;AACV01007854.1/42879-42749 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 attttgggacggaggtagtagt 115
||||||||||||||||||||||
Sbjct: 108 attttgggacggaggtagtagt 129
>RF00906;MIR1122;AAAA02000341.1/36626-36710 39946:Oryza sativa
Indica Group
Length = 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 17 ctccgtcccaaaatataagca-ttttagctatgaatct 53
|||| |||||||||||||||| |||||| |||||||||
Sbjct: 75 ctccatcccaaaatataagcatttttagttatgaatct 38
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 104 ttatattttgggacggagggagtagt 129
>RF00906;MIR1122;AAAA02007456.1/5960-5794 39946:Oryza sativa Indica
Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 84 aagttgttatattttgggacggaggtagtagtta 117
||||||| |||| |||||||||||| ||||||||
Sbjct: 34 aagttgtaatatattgggacggagggagtagtta 1
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 104 ttatattttgggacggagggagtagt 129
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa Indica
Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 28 ttatattttgggacggagggagtagt 3
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataag 35
|||||| |||||||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaatataag 94
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataag 35
|||||| |||||||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaatataag 94
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagta 113
|||||| |||||||||||||||||| ||||
Sbjct: 124 aagttgctatattttgggacggagggagta 153
>RF00906;MIR1122;AC097446.3/172120-171989 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 94 attttgggacggaggtagtagt 115
||||||||||||||||||||||
Sbjct: 24 attttgggacggaggtagtagt 3
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 97 ttatattttgggacggagggagtagt 122
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 ttgttatattttgggacggaggtagtagtt 116
||||||||||||| |||||||| |||||||
Sbjct: 106 ttgttatattttgagacggagggagtagtt 135
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 aagttgttatattttgggacgg 105
||||||||||||||||||||||
Sbjct: 33 aagttgttatattttgggacgg 12
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 tagtactctctccgtcccaaaatata 33
|||||||| |||||||||||||||||
Sbjct: 128 tagtactccctccgtcccaaaatata 103
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 86 gttgttatattttgggacggaggtagtagt 115
|||| |||||||||||||||||| ||||||
Sbjct: 32 gttgctatattttgggacggagggagtagt 3
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactctctccgtcccaaaatataag 35
|||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 105 ttatattttgggacggagggagtagt 130
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 aaagttgttatattttgggacggagg 108
|||||| |||||||||||||||||||
Sbjct: 84 aaagttattatattttgggacggagg 109
>RF00906;MIR1122;AC093492.3/33191-33068 39947:Oryza sativa Japonica
Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 84 aagttgttatattttgggacggaggtagta 113
||||| ||||||||||||||||||| ||||
Sbjct: 91 aagttcttatattttgggacggagggagta 120
>RF00906;MIR1122;AP008207.1/29270032-29270129 39947:Oryza sativa
Japonica Group
Length = 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 agtactctctccgtcccaaaatataa 34
||||||||||| ||||||||||||||
Sbjct: 3 agtactctctctgtcccaaaatataa 28
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 ttatattttgggacggaggtagtagt 115
||||||||||||||||||| ||||||
Sbjct: 130 ttatattttgggacggagggagtagt 155
>RF00906;MIR1122;AP004031.3/125858-125981 39947:Oryza sativa
Japonica Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagtagt 115
||||||||||| ||||||||||| ||||||
Sbjct: 93 gttgttatattatgggacggagggagtagt 122
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactctctccgtcccaaaatataag 35
|||||| |||||||||||||||||||
Sbjct: 137 gtactccctccgtcccaaaatataag 112
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 86 gttgttatattttgggacggaggtagtagt 115
|||| |||||||||||||||||| ||||||
Sbjct: 76 gttgctatattttgggacggagggagtagt 105
