miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 129 bits (65), Expect = 2e-29
Identities = 85/89 (95%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgta-gtgtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||||||||||||
Sbjct: 182 tcgtcttattcaaaaaatttatgcaaata 154
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtagtcaaaccgtgcaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 173 aataagacgagtggtcaaacactacaagcaaaaactcaaaatcccttatattatgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 87.7 bits (44), Expect = 7e-17
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| | | ||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcacg-gtttgactac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 172 aataagacgagtggtcaaacagtataagtaaaaacttaaaatcccttatattatgggacg 231
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 232 gagggagtaa 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||| ||| ||||||||||||||||||||| || | ||||||||||||
Sbjct: 2 tactccctccgtctcatgatataagggattttgagtttttgtttgcactgtttgaccact 61
Query: 72 cgtcttattcaaataattt 90
||||||||||||| |||||
Sbjct: 62 cgtcttattcaaaaaattt 80
Score = 77.8 bits (39), Expect = 7e-14
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgacca 69
|||||| |||||||||||||||||||||||||| |||||| ||| || ||||||||||
Sbjct: 241 ttactccctccgtcccataatataagggattttaagtttttacttatac-tgtttgacca 183
Query: 70 ctcgtcttattcaaa 84
|||||||||||||||
Sbjct: 182 ctcgtcttattcaaa 168
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || |||||||||||||| ||||||| ||| ||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatatcatgagacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 113 bits (57), Expect = 1e-24
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgt-actgtttgaccac 60
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 61 tcgtcttattcaaaaaatttgtgcaaata 89
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 170 aataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgggacg 229
Query: 244 gagggagta 252
|||||||||
Sbjct: 230 gagggagta 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||| ||||||||| |||| ||||| | |||||||||||
Sbjct: 238 tactccctccgtcccataatataagagattttgagtttttccttgt-actgtttgaccac 180
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 179 tcgtcttattcaaa 166
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 113 bits (57), Expect = 1e-24
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 238 tactccctccgtcccataatataagggattttgagtttttgcttgt-actgtttgaccac 180
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 179 tcgtcttattcaaaaaatttgtgcaaata 151
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 170 aataagacgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacg 229
Query: 244 gagggagta 252
|||||||||
Sbjct: 230 gagggagta 238
Score = 83.8 bits (42), Expect = 1e-15
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||| ||||||||| |||| ||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagagattttgagtttttccttgt-actgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 111 bits (56), Expect = 5e-24
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttcttg-cactgtttgaccact 179
Query: 72 cgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||| ||||||||
Sbjct: 178 cgtcttattcaaaaaatttgtgcaaata 151
Score = 89.7 bits (45), Expect = 2e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 170 aataagacgagtggtcaaacagtgcaag-aaaaactcaaaatcccttatattatgggacg 228
Query: 244 gagggagta 252
|||||||||
Sbjct: 229 gagggagta 237
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| ||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtgatcaaagagtgcaaacaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||| ||||
Sbjct: 10 gaggaagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggattttgagtttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 8 ctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa
Indica Group
Length = 244
Score = 107 bits (54), Expect = 8e-23
Identities = 71/74 (95%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaa-tgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacattacaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 81.8 bits (41), Expect = 5e-15
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 243 tactccctccgtcccataatataagggattttgagtttttgcttgcaa-cgtttgaccat 185
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 184 tcgtcttattcaa 172
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 175 aataagacgaatggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacg 234
Query: 244 gagggagta 252
|||||||||
Sbjct: 235 gagggagta 243
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||
Sbjct: 169 aataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgggacg 228
Query: 244 gagggagta 252
|||||||||
Sbjct: 229 gagggagta 237
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || |||||||||| ||||||| |||||||| |||||||
Sbjct: 70 aataagacgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 83.8 bits (42), Expect = 1e-15
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttacttgtatc-gtttgaccac 179
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 178 tcgtcttattcaaa 165
Score = 81.8 bits (41), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||| | |||| ||||||| ||||||||||
Sbjct: 2 tactccctccgtcccacaatataagggattttgggtttttacttgtaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||| ||||||||
Sbjct: 61 tcgtcttattcaaattttttttgcaaata 89
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 105 bits (53), Expect = 3e-22
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||||||||||| |||||||||||||| ||| || ||||||||||||
Sbjct: 241 tactccctccgtcccataatataaaggattttgagtttttacttata-gtgtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||||||||||||
Sbjct: 182 tcgtcttattcaaaaaatttatgcaaata 154
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 173 aataagacgagtggtcaaacactataagtaaaaactcaaaatcctttatattatgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 87.7 bits (44), Expect = 7e-17
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgctagt-agtgtttgaccac 60
Query: 71 tcgtcttattcaaataattt 90
| ||||||||||| |||||
Sbjct: 61 ttatcttattcaaaaaattt 80
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagataagtggtcaaacactactagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || |||||||||| ||||||| |||||||| |||||||
Sbjct: 169 aataagacgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacg 228
Query: 244 gagggagta 252
|||||||||
Sbjct: 229 gagggagta 237
Score = 83.8 bits (42), Expect = 1e-15
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttacttgtatc-gtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 81.8 bits (41), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 237 tactccctccgtcccacaatataagggattttgggtttttacttgtaac-gtttgaccac 179
Query: 71 tcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||| ||||||||
Sbjct: 178 tcgtcttattcaaattttttttgcaaata 150
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 105 bits (53), Expect = 3e-22
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttcttgt-actgtttgaccact 60
Query: 72 cgtcttattcaaa 84
|||||||||||||
Sbjct: 61 cgtcttattcaaa 73
Score = 97.6 bits (49), Expect = 8e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 69 aataagacgagtggtcaaacagtacaag-aaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg--cttgtaagtgtttgacca 69
||||| |||||||||||||||||||||| ||| |||||| || ||| ||||||||||
Sbjct: 232 tactccctccgtcccataatataagggactttaagtttttttctcgtat-tgtttgacca 174
Query: 70 ctcgtcttattcaaataatttatgcaaata 99
||||||||||||||| | ||| ||||||||
Sbjct: 173 ctcgtcttattcaaaaattttgtgcaaata 144
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataag-taaaaactcaaaatcacttatattatgggac 242
|||||||||||||||||||| || || ||||||| ||| || |||||||||||||||
Sbjct: 163 aataagacgagtggtcaaacaatacgagaaaaaaacttaaagtcccttatattatgggac 222
Query: 243 ggagggagta 252
||||||||||
Sbjct: 223 ggagggagta 232
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa
Indica Group
Length = 242
Score = 101 bits (51), Expect = 5e-21
Identities = 71/75 (94%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaat 85
|||||||||||||||
Sbjct: 61 tcgtcttattcaaat 75
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgttacaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||||||||| |||||| |||||||| ||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttcagtttttgcttgtaac-gtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||| ||||||||
Sbjct: 182 tcgtcttattcaaattttttttgcaaata 154
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| ||||||| |||||| |||||||| |||||||
Sbjct: 173 aataagacgagtggtcaaacgttacaagcaaaaactgaaaatcccttatattgtgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 99.6 bits (50), Expect = 2e-20
Identities = 70/74 (94%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcaa-tgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacattgcaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccactcgtctt 77
||||||||| |||||||||||||||||||||| ||||| || ||| ||||||||||||
Sbjct: 236 tccgtcccacaatataagggattttgagtttttgcttgcaaca-tttaaccactcgtctt 178
Query: 78 attcaaat 85
||||||||
Sbjct: 177 attcaaat 170
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||| ||| | ||| |||||||||||||| |||||||| |||||||
Sbjct: 175 aataagacgagtggttaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacg 234
Query: 244 gagggagta 252
|| ||||||
Sbjct: 235 gaaggagta 243
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | |||| |||||||||||||| ||||||||||||||||
Sbjct: 172 aataagacgagtggtcaaacactgtaagcaaaaactcaaaatcccttatattatgggacg 231
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 232 gagggagtaa 241
Score = 93.7 bits (47), Expect = 1e-18
Identities = 70/75 (93%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgacca 69
|||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 241 ttactccctccgtcccataatataagggattttgagtttttgctt-acagtgtttgacca 183
Query: 70 ctcgtcttattcaaa 84
|||||||||||||||
Sbjct: 182 ctcgtcttattcaaa 168
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttgctt-acagtgtttgaccac 60
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|| ||||||| ||| ||||||||||||||
Sbjct: 61 tcatcttatttaaaaaatttatgcaaata 89
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| |||||||||||| | |||| ||||||| |||||| ||||||||||||||||
Sbjct: 70 aataagatgagtggtcaaacactgtaagcaaaaacttaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 99.6 bits (50), Expect = 2e-20
Identities = 70/74 (94%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgt-attgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacaatacaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 243 tactccctccgtcccataatataagggattttgagtttttgtttagattgtttgaccact 184
Query: 72 cgtcttattcaaa 84
|||||||||||||
Sbjct: 183 cgtcttattcaaa 171
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 175 aataagacgagtggtcaaacaatctaaacaaaaactcaaaatcccttatattatgggacg 234
Query: 244 gagggagta 252
|||||||||
Sbjct: 235 gagggagta 243
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || ||||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaataaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttatttgcactgtttgaccact 61
Query: 72 cgtcttattcaaataattt 90
||||||||| ||| |||||
Sbjct: 62 cgtcttattaaaaaaattt 80
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| |||||||||||| | || ||||||||||||||| |||||||||||| | |
Sbjct: 173 aataagatgagtggtcaaacaatgcaaataaaaactcaaaatcccttatattatggaatg 232
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 233 gagggagtaa 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccac 70
|||||| |||| | |||||||||||||||||||||||||| || | |||||||||||
Sbjct: 242 ttactccctccattccataatataagggattttgagtttttatttgcattgtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|| ||||||| ||| || || ||||||||
Sbjct: 182 tcatcttatttaaaaaaattgtgcaaata 154
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagtaaaaacttaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 72/80 (90%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttacttgcac-tgtttgaccac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || ||| |||||||||||||| |||||||||| ||||
Sbjct: 171 aataagacgaatggtcaaacagtggaagcaaaaactcaaaatcttttatattatgagacg 230
Query: 244 gagggagta 252
|||||||||
Sbjct: 231 gagggagta 239
Score = 58.0 bits (29), Expect = 7e-08
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||| |||||||||| ||||||||||||| |||| | ||||||||||
Sbjct: 239 tactccctccgtctcataatataaaagattttgagtttttgcttccac-tgtttgaccat 181
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| | ||||||
Sbjct: 180 tcgtcttattcaaaaaatttgtacaaata 152
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||
Sbjct: 70 aataagacgagtggtcaaacagtataagcaaaaactcaaaatcccttatattattagacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 83.8 bits (42), Expect = 1e-15
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactcgtctt 77
|||| ||||||||||||||| |||||||||||| || | ||||||||||||||||||
Sbjct: 236 ctccatcccataatataaggaattttgagtttttgtttgcactgtttgaccactcgtctt 177
Query: 78 attcaaataatttatgcaaata 99
||||||| ||||| ||||||||
Sbjct: 176 attcaaaaaatttgtgcaaata 155
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||| |||||||||||||||||||| |||||||| | | |||||||||||
Sbjct: 2 tactccctccgtctaataatataagggattttgagtttttgcttat-actgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || ||||||||||||| |||||||||||||| |
Sbjct: 174 aataagacgagtggtcaaacagtgcaaacaaaaactcaaaattccttatattatgggatg 233
Query: 244 gagggagtaa 253
|||| |||||
Sbjct: 234 gaggaagtaa 243
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa
Indica Group
Length = 238
Score = 97.6 bits (49), Expect = 8e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| |||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagttttgattg-cactgtttgaccact 60
Query: 72 cgtcttattcaaa 84
|||||||||||||
Sbjct: 61 cgtcttattcaaa 73
Score = 81.8 bits (41), Expect = 5e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || | ||||||||||||| ||||||||||||||||
Sbjct: 69 aataagacgagtggtcaaacagtgcaa-tcaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| |||||||| |||||| ||||||||||||||||| || | ||||||||||||
Sbjct: 237 tactccctccgtcctataatacaagggattttgagttttagtttgcattgtttgaccact 178
Query: 72 cgtcttattcaaataatttatgcaaata 99
| ||||||||||| ||||| ||||||||
Sbjct: 177 catcttattcaaaaaatttgtgcaaata 150
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 214 aaaactcaaaatcacttatattatgggacggagggagta 252
||||||||||||| ||| |||||| ||||||||||||||
Sbjct: 199 aaaactcaaaatcccttgtattataggacggagggagta 237
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 97.6 bits (49), Expect = 8e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactcgtctta 78
|||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 228 tccgtcccataatataagggattttgagtttttgtttacactgtttgaccactcgtctta 169
Query: 79 ttcaaataatttatgcaaata 99
|||||| ||||| ||||||||
Sbjct: 168 ttcaaaaaatttgtgcaaata 148
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 167 aataagacgagtggtcaaacagtgtaaacaaaaactcaaaatcccttatattatgggacg 226
Query: 244 gagggagta 252
|| ||||||
Sbjct: 227 gatggagta 235
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| ||||| || || ||||||||||||||| | ||||||||||||||
Sbjct: 70 aataagacgagtgatcaaagagtgcaaataaaaactcaaaatcccatatattatgggacg 11
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 10 gagggagtaa 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccac 70
|||||| ||||||||||||||||| ||||||||||||||| || | | ||||| |||
Sbjct: 1 ttactccctccgtcccataatatatgggattttgagtttttatttgcactctttgatcac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 76/83 (91%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtct 76
|||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||
Sbjct: 233 ctccgtcccataatataagggattttgatattttgcttgcac-tgtttgaccactcgtct 175
Query: 77 tattcaaataatttatgcaaata 99
|||||||| ||||| ||||||||
Sbjct: 174 tattcaaaaaatttgtgcaaata 152
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||| |||||||| ||||||||||||||||
Sbjct: 171 aataagacgagtggtcaaacagtgcaagcaaaatatcaaaatcccttatattatgggacg 230
Query: 244 gagggagta 252
|||| ||||
Sbjct: 231 gaggaagta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||| |||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttgatattttgcttg-cactgtttgaccat 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || ||| |||| |||||||| ||||||||| ||||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaatatcaaaatcccttatattaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 93.7 bits (47), Expect = 1e-18
Identities = 70/75 (93%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgctcgtaa-cgtttaaccac 60
Query: 71 tcgtcttattcaaat 85
|||||||||||||||
Sbjct: 61 tcgtcttattcaaat 75
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||||||||||| |||||| |||||||| |||||||
Sbjct: 175 aataagacgagtggtcaaacgttgcaagtaaaaactgaaaatcccttatattgtgggacg 234
Query: 244 gagggagta 252
|||||||||
Sbjct: 235 gagggagta 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||| |||| || || |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggttaaacgttacgagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
||| |||||
Sbjct: 10 gagagagta 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||||||||| |||||| |||| || ||||||||||
Sbjct: 243 tactccctccgtcccacaatataagggattttcagtttttacttgcaac-gtttgaccac 185
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||
Sbjct: 167 aataagacgagtggtcaaagtgtgtaagcaaaaactcaaaatcccttatattatgggacg 226
Query: 244 gagggagtaa 253
|||||||||
Sbjct: 227 tagggagtaa 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgacca 69
|||||| || |||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 236 ttactccctacgtcccataatataagggattttgagtttttgcttacacac-tttgacca 178
Query: 70 ctcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||||||||||||||
Sbjct: 177 ctcgtcttattcaaaaaatttatgcaaata 148
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| |||||| |||||||||||||||||||||||||| || | |||||||| |||
Sbjct: 2 tactccctccgttccataatataagggattttgagtttttgtttgcactgtttgactact 61
Query: 72 cgtcttattcaaataattt 90
||||||||||||| |||||
Sbjct: 62 cgtcttattcaaaaaattt 80
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| || || |||||||||||||| |||||||||||| |||
Sbjct: 70 aataagacgagtagtcaaacagtgcaaacaaaaactcaaaatcccttatattatggaacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 91.7 bits (46), Expect = 5e-18
Identities = 69/74 (93%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 242 tactccctccgtcccataatataagggattttgagtttttgcttgcaa-cgtttgaccac 184
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 174 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||||||||| || ||||||||| || ||||||||||
Sbjct: 2 tactccctccgtcccacaatataagggattttcagtttttgcttgcaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaataatttatgcaaata 99
| |||||||| |||| ||| ||||||||
Sbjct: 61 ttgtcttatttaaattttttttgcaaata 89
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||| ||||||||||| | ||| ||||||| |||||| |||||||| |||||||
Sbjct: 70 aataagacaagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa
Indica Group
Length = 242
Score = 91.7 bits (46), Expect = 5e-18
Identities = 69/74 (93%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttggaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgttccaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||||||||| || | |||||| || ||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttaagctactgcttgcaa-cgtttgaccac 183
Query: 71 tcgtcttattcaa 83
|| ||||||||||
Sbjct: 182 tcatcttattcaa 170
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
|||||| |||||||| ||||||||||||||||
Sbjct: 210 aaaatcccttatattgtgggacggagggagta 241
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| ||||||| ||||||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagaaaaaactcaaaatctcttatatcatgggacg 11
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 10 gagggagtaa 1
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 188 agacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacggagg 247
|||||||||||||||| || ||| |||||||||||||| |||||||||||||| |||||
Sbjct: 176 agacgagtggtcaaacagtgcaagcaaaaactcaaaatctcttatattatgggatggagg 235
Query: 248 gagta 252
|||||
Sbjct: 236 gagta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgacca 69
|||||| ||||||||||| ||||||| ||||||||||||| |||| | ||||||||||
Sbjct: 1 ttactccctccgtcccatgatataagagattttgagttttttcttgcac-tgtttgacca 59
Query: 70 ctcgtcttattcaaa 84
|||||||||||||||
Sbjct: 60 ctcgtcttattcaaa 74
Score = 60.0 bits (30), Expect = 2e-08
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||| |||||||||||||| ||||||||| ||||||||| | |||||||||||
Sbjct: 240 tactccctccatcccataatataagagattttgagtttttgcttg-cactgtttgaccac 182
Query: 71 tcgtct 76
||||||
Sbjct: 181 tcgtct 176
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 91.7 bits (46), Expect = 5e-18
Identities = 75/82 (91%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccactcgtctt 77
||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||
Sbjct: 235 tccgtcccataatataagggattttgactttttgcttgcac-tgtttgaccactcgtctt 177
Query: 78 attcaaataatttatgcaaata 99
||||||| ||||| ||||||||
Sbjct: 176 attcaaaaaatttgtgcaaata 155
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||
Sbjct: 174 aataagacgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgggacg 233
Query: 244 gagggagta 252
|| ||||||
Sbjct: 234 gatggagta 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactcgtctta 78
||||||||||||||||||||||||||| |||| || | |||||||||| ||||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttatttgcactgtttgaccattcgtctta 68
Query: 79 ttcaaa 84
||||||
Sbjct: 69 ttcaaa 74
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || || |||||| |||||||| ||||||||||||||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaaataaaaagtcaaaatcccttatattatgggacg 11
Query: 244 ga 245
||
Sbjct: 10 ga 9
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||
Sbjct: 73 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcacttatattatgagacg 14
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 13 gagggagtaa 4
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 8 atattactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttga 66
||||||||| ||||||| ||||||||||| ||||||||| ||||||||| || ||||||
Sbjct: 1 atattactccctccgtctcataatataagtgattttgagtttttgcttgcaa-cgtttga 59
Query: 67 ccactcgtcttatt 80
||||||||||||||
Sbjct: 60 ccactcgtcttatt 73
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 209 aagtaaaaactcaaaatcacttatattatgggacggagggagta 252
|||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 87 aagtaaaaactcaaaatcccttatattgtgggacggagggagta 130
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt 50
||||| |||||||||| ||||||||||||||||||||||
Sbjct: 130 tactccctccgtcccacaatataagggattttgagtttt 92
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| || |||||||||||||| |||||||||| |||||
Sbjct: 167 aataagacgagtggtcaaacagtacaaacaaaaactcaaaatcccttatattataggacg 226
Query: 244 gagggagta 252
|||||||||
Sbjct: 227 gagggagta 235
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| |||||| ||| ||| |||||||||||||| ||||||||||| ||||
Sbjct: 70 aataagacgagtaatcaaacagtacaagcaaaaactcaaaatcccttatattatgagacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 77.8 bits (39), Expect = 7e-14
Identities = 71/79 (89%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||| |||||||||||||||||||| ||||| |||| | |||||||||||
Sbjct: 235 tactccctccgtcctataatataagggattttgagtttttgtttgt-actgtttgaccac 177
Query: 71 tcgtcttattcaaataatt 89
|||||||||| ||| ||||
Sbjct: 176 tcgtcttattaaaaaaatt 158
Score = 71.9 bits (36), Expect = 4e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||| ||||||||||||||||||||| |||||||||| | ||||||| ||
Sbjct: 2 tactccctccgtctcataatataagggattttgagtttttgcttgt-actgtttgattac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||| ||| |||||
Sbjct: 61 tcgtcttattaaaaaaattt 80
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| || ||||||||| |||||||| ||||||||||||||||
Sbjct: 174 aataagacgagtagtcaaacagtgcaagtaaaaagtcaaaatcccttatattatgggacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||||| |||| |||| | |||||||| ||
Sbjct: 242 tactccctccgtcccataatataagggattttgactttttacttg-cactgtttgactac 184
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 183 tcgtcttattcaaaaaatttgtgcaaata 155
Score = 60.0 bits (30), Expect = 2e-08
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgct--tgtaagtgtttgacca 69
||||| || ||||||||||||||||||||||||| |||| | || | ||||||||||
Sbjct: 2 tactcccttcgtcccataatataagggattttgactttttttgctggcactgtttgacca 61
Query: 70 ctcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 62 ttcgtcttattcaaaaaattt 82
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 213 aaaaactcaaaatcacttatattatgggacggagggagta 252
||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 41 aaaaagtcaaaatcccttatattatgggacgaagggagta 2
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgttataaagaaaaactcaaaatctcttatattatgggacg 11
Query: 244 gagggagta 252
|||| ||||
Sbjct: 10 gaggaagta 2
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactcgtctt 77
||||||||||||||||||| ||||||||||||| ||| | |||||||||||||||||
Sbjct: 8 ctccgtcccataatataagagattttgagtttttctttataacgtttgaccactcgtctt 67
Query: 78 attcaaataattt 90
||||||| |||||
Sbjct: 68 attcaaaaaattt 80
Score = 79.8 bits (40), Expect = 2e-14
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgagttttgc-ttgtaagtgtttgacca 69
|||||| ||||||||||||||||||||||||||||||||| | ||| || ||||||| |
Sbjct: 238 ttactccctccgtcccataatataagggattttgagtttttcattgcaa-cgtttgacta 180
Query: 70 ctcgtcttattcaaat 85
||||||||||||||||
Sbjct: 179 ctcgtcttattcaaat 164
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| | || |||||||||||||| ||||||||||||||||
Sbjct: 169 aataagacgagtagtcaaacgttgcaatgaaaaactcaaaatcccttatattatgggacg 228
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 229 gagggagtaa 238
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgtgtgaactgtttgaccact 61
Query: 72 cgtcttatt 80
|||||||||
Sbjct: 62 cgtcttatt 70
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataaggga-ttttgag-ttttgcttgtaagtgtttgacca 69
|||||||||||||| ||||||||||||| ||||||| ||||| ||| || ||||||||||
Sbjct: 241 tactctctccgtcctataatataagggatttttgagtttttggttg-aactgtttgacca 183
Query: 70 ctcgtcttattcaaa 84
|||||||||||||||
Sbjct: 182 ctcgtcttattcaaa 168
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || | |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagttcacacaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
||| |||||
Sbjct: 10 gagagagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactc-aaaatcacttatattatgggac 242
|||||||||||||||||||| || || |||||||| |||||| |||||||||| ||||
Sbjct: 172 aataagacgagtggtcaaacagttcaaccaaaaactcaaaaatcccttatattataggac 231
Query: 243 ggagggagta 252
|||| |||||
Sbjct: 232 ggagagagta 241
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| |||||| || |||||||||||||||||| |||||||||| |||||
Sbjct: 70 aataagacgagtgatcaaacagtgcaagtaaaaactcaaaatctcttatattataggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 20 ccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccactcgtctta 78
||||||||||||||||| |||||| |||||| |||| | |||||||||||||||||||
Sbjct: 232 ccgtcccataatataagagattttaagtttttgcttacat-tgtttgaccactcgtctta 174
Query: 79 ttcaaataatttatgcaaata 99
|||||| ||||| ||||||||
Sbjct: 173 ttcaaaaaatttgtgcaaata 153
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | |||| ||||||| |||||| ||||||||||||||||
Sbjct: 172 aataagacgagtggtcaaacaatgtaagcaaaaacttaaaatctcttatattatgggacg 231
Query: 244 g 244
|
Sbjct: 232 g 232
Score = 63.9 bits (32), Expect = 1e-09
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||| |||||||||| ||||||||||||| |||| | ||||||| |||
Sbjct: 2 tactccctccgtcctataatataagagattttgagtttttacttgcac-tgtttgatcac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttgagtttttgtttgcactgtttgaccact 181
Query: 72 cgtcttattcaaa 84
|||||||||||||
Sbjct: 180 cgtcttattcaaa 168
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 172 aataagacgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatattatgggacg 231
Query: 244 gagggagta 252
|||||||||
Sbjct: 232 gagggagta 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 13 actctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactc 72
|||| ||||||||||||||||||||||||||||||||| || | | |||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgtttgcactatttgaccactc 62
Query: 73 gtcttattcaaa 84
||||||||||||
Sbjct: 63 gtcttattcaaa 74
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaatagtgcaaacaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagt 251
||||||||
Sbjct: 10 gagggagt 3
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa Indica
Group
Length = 243
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || |||| ||||| |||||||| ||||||||||||||||
Sbjct: 70 aataagacgaatggtcaaacagtgtaagcaaaaagtcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || |||||||||| | |||||| ||||||||||||||||
Sbjct: 174 aataagacgactggtcaaacagtgtaagtaaaaagttaaaatcccttatattatgggacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgctt-acactgtttgaccat 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggatttt 43
||||| ||||||||||||||||||||||||||
Sbjct: 242 tactccctccgtcccataatataagggatttt 211
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| || ||| |||||||||||||| ||||||||||||||||
Sbjct: 176 aataagacgagtagtcaaacagtgcaagcaaaaactcaaaatcccttatattatgggacg 235
Query: 244 gagggagta 252
|||||||||
Sbjct: 236 gagggagta 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||| ||
Sbjct: 244 tactccctccgtcccataatataagggattttgagtttttgcttg-cactgtttgactac 186
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 185 tcgtcttattcaa 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| | ||||||| ||| || ||||||| |||||| ||||||||||||||||
Sbjct: 70 aataagacgattagtcaaacagtacaaacaaaaacttaaaatcccttatattatgggacg 11
Query: 244 gagggag 250
|||||||
Sbjct: 10 gagggag 4
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtct 76
|||||||||||||||||||||||||| || ||||| |||| | |||||||| | ||||||
Sbjct: 8 ctccgtcccataatataagggattttaagtttttgtttgt-actgtttgactaatcgtct 66
Query: 77 tattcaaataattt 90
|||||||| |||||
Sbjct: 67 tattcaaaaaattt 80
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||| ||||||||||||||||||||||||| ||||| | | |||||||||
Sbjct: 238 tactccctccgtctcataatataagggattttgagtttttgcttgcac-tctttgaccac 180
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||| ||| ||||||||||||||
Sbjct: 179 tcgtcttatttaaaaaatttatgcaaata 151
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||||||| || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 170 aataagacgagtggtcaaagagtgcaagcaaaaactcaaaatcccttatattatgagacg 229
Query: 244 gagggagta 252
|||||||||
Sbjct: 230 gagggagta 238
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| |||| ||||||||||||||||||| |||||||| || | ||||||||||||
Sbjct: 2 tactccctccatcccataatataagggattctgagtttttgtttgcactgtttgaccact 61
Query: 72 cgtcttattcaaataattt 90
||||||||||||| |||||
Sbjct: 62 cgtcttattcaaaaaattt 80
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || ||||||||| |||| |||||||||||||| |
Sbjct: 70 aataagacgagtggtcaaacagtgcaaacaaaaactcagaatcccttatattatgggatg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||||| | | ||||| |||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgt-actatttgatcac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|| ||||||||||| || |||||||||||
Sbjct: 182 tcatcttattcaaaaaaattatgcaaata 154
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| ||||| ||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 173 aataagatgagtgatcaaatagtacaagcaaaaactcaaaatcccttatattatgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| ||||| || ||| |||||| ||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtgatcaaagagtgcaagcaaaaacacaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||| ||||| ||||| | | ||||| |||
Sbjct: 2 tactccctccgtcccataatataagggattttgtgtttttgcttgcac-tctttgatcac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 239 tactccctccgtcccataatataagggattttgagtttttgctt-actttgtttgaccac 181
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 180 tcgtcttattcaaaaaatttgtgcaaata 152
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||
Sbjct: 171 aataagacgagtggtcaaacaaagtaagcaaaaactcaaaatcccttatattatgggacg 230
Query: 244 gagggagta 252
|||||||||
Sbjct: 231 gagggagta 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| |||||||||||| || ||| |||||||| ||||| ||||||||||||||||
Sbjct: 70 aataagatgagtggtcaaacggtgcaagcaaaaactccaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|| ||||||
Sbjct: 10 gatggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggattttgagtttt 50
|||||||||||||||||||||||| |||||||
Sbjct: 9 tccgtcccataatataagggatttggagtttt 40
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 172 aataagacgagtgatcaaaccgtgcaagcaaaaactcaaaatcccttatattatgggatg 231
Query: 244 gagggagta 252
|||||||||
Sbjct: 232 gagggagta 240
Score = 81.8 bits (41), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||| |||||||||||||||||||||||| ||||||||| | | |||||| |||
Sbjct: 240 tactccctccatcccataatataagggattttgagtttttgcttgcacg-gtttgatcac 182
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||| ||| ||||| ||||||||
Sbjct: 181 tcgtcttatttaaaaaatttgtgcaaata 153
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacaacgcaagcaaaaattcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|| ||||||
Sbjct: 10 gaaggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggattttg-agttttgcttgtaagtgtttgaccactcgtctt 77
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttgaatttttgcttg-cgttgtttgaccactcgtctt 67
Query: 78 att 80
|||
Sbjct: 68 att 70
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| |||||||||||| |||||||| ||||||||| ||||||
Sbjct: 70 aataagacgaatggtcaaacagtataagtaaaatatcaaaatcccttatattaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 194 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 155
Score = 60.0 bits (30), Expect = 2e-08
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||| |||||||||||||||||| |||| ||| | | ||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttgatattttacttat-actgtttgaccat 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 44.1 bits (22), Expect = 0.001
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatatt-atgggac 242
|||||||||||||||||||| || ||| |||| |||||||| ||| |||| |||||
Sbjct: 174 aataagacgagtggtcaaacagtgcaagcaaaatatcaaaatcccttttattggggggac 233
Query: 243 ggagggagta 252
||||||||||
Sbjct: 234 ggagggagta 243
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgcttg-cactgtttgaccac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagt-tttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||||| | |||||||| | |||||||||||
Sbjct: 234 tactccctccgtcccataatataagggattttgactatttgcttg-cactgtttgaccac 176
Query: 71 tcgtcttattcaaa 84
| ||||||||||||
Sbjct: 175 ttgtcttattcaaa 162
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||| ||||||||||| || ||| ||| | |||||||| ||||||||||||||||
Sbjct: 166 aataagacaagtggtcaaacagtgcaagcaaatagtcaaaatcccttatattatgggacg 225
Query: 244 gagggagta 252
|||||||||
Sbjct: 226 gagggagta 234
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa Indica
Group
Length = 243
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||| ||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 242 tactccctcggtcccctaatataagggattttgacattttgcttgtac-tgtttgaccac 184
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 183 tcgtcttattcaaaaaatttgtgcaaata 155
Score = 73.8 bits (37), Expect = 1e-12
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgacca 69
|||||| ||||||||| |||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 1 ttactccctccgtcccttaatataagggattttgacattttgcttg-cactgtttgacca 59
Query: 70 ctcgtcttattcaaata 86
||||||||||||||||
Sbjct: 60 ttcgtcttattcaaata 76
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||| ||| |||| |||||||| ||||||||| |||||
Sbjct: 174 aataagacgagtggtcaaacagtacaagcaaaatgtcaaaatcccttatattaggggacc 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || ||| |||| |||||||| ||||||||| ||||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaatgtcaaaatcccttatattaagggacg 11
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 10 gagggagtaa 1
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||| |||||| |||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 2 tactccctctgtcccacaatataagggattttgagtttttgcttgt-agtgtttgaccac 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||| ||| |||||
Sbjct: 61 tcgtcttatttaaaaaattt 80
Score = 83.8 bits (42), Expect = 1e-15
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 23 tcccataatataagggattttgagttttg-cttgtaagtgtttgaccactcgtcttattc 81
|||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||||
Sbjct: 226 tcccataatataagggattttgggtttttacttgta-gtgtttgaccacttgtcttattc 168
Query: 82 aaataatttatgcaaata 99
||| ||||||| ||||||
Sbjct: 167 aaaaaatttatacaaata 150
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| |||||||| ||||||
Sbjct: 70 aataagacgagtggtcaaacactacaagcaaaaactcaaaatcccttatattgtgggaca 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||| ||||||||||| || |||||||||| ||||||| ||||||||||||||
Sbjct: 169 aataagacaagtggtcaaacactacaagtaaaaacccaaaatcccttatattatgggaaa 228
Query: 244 gagggagta 252
|||||||||
Sbjct: 229 gagggagta 237
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgacca 69
|||||| | ||||||||||||||||||||||||||| ||||| ||| || ||||||||||
Sbjct: 240 ttactccccccgtcccataatataagggattttgagtttttggttg-aactgtttgacca 182
Query: 70 ctcgtcttattcaaataatttatgcaaata 99
||||||||||| ||| ||||| ||||||||
Sbjct: 181 ctcgtcttatt-aaaaaatttgtgcaaata 153
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 171 aataagacgagtggtcaaacagttcaaccaaaaactcaaaatcccttatattatgggacg 230
Query: 244 gagggagtaa 253
| ||||||||
Sbjct: 231 gggggagtaa 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 27 ataatataagggattttgagttttgcttgtaagtgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 17 ataatataagggattttgagtttttgtttgaactgtttgaccactcgtcttattcaaa 74
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || |||||||||||||| |||||||||| | ||
Sbjct: 70 aataagacgagtggtcaaacagttcaaacaaaaactcaaaatcccttatattatagatcg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 83.8 bits (42), Expect = 1e-15
Identities = 62/66 (93%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 20 ccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtctta 78
||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 10 ccgtcccataatataagggattttgagtttttgcttgcaa-cgtttgaccactcgtctta 68
Query: 79 ttcaaa 84
||||||
Sbjct: 69 ttcaaa 74
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
| |||||||
Sbjct: 10 gggggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||| ||||||||||| | ||| ||||||| |||||| |||||||| |||||||
Sbjct: 174 aataagacaagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 61.9 bits (31), Expect = 4e-09
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||||||||| || ||||||||| || ||||||||||
Sbjct: 242 tactccctccgtcccacaatataagggattttcagtttttgcttgcaa-cgtttgaccac 184
Query: 71 tcgtcttattcaaat 85
| |||||||| ||||
Sbjct: 183 ttgtcttatttaaat 169
>RF01058;MIR806;AAAA02011733.1/14977-15220 39946:Oryza sativa Indica
Group
Length = 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| ||||||| |||| |||||||| ||||||| | ||||||
Sbjct: 175 aataagacgagtggtcaaacagtataagcaaaatatcaaaatcccttatatcaggggacg 234
Query: 244 gagggagta 252
|||||||||
Sbjct: 235 gagggagta 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 78/89 (87%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||| | |||||||||||||||| |||||||| || |||||||||||
Sbjct: 243 tactccctccgtcccctgatataagggattttgatattttgcttatac-tgtttgaccac 185
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| |||| ||||||||
Sbjct: 184 tcgtcttattcaaaatatttgtgcaaata 156
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| || |||||| || |||| |||| |||||||| ||||| ||| ||||||
Sbjct: 70 aataagacgaatgatcaaacagtgtaagcaaaatatcaaaatcccttattttaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga 45
||||| ||||||||| ||| ||||||||||||||
Sbjct: 2 tactccctccgtcccctaaaataagggattttga 35
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| |||||| ||| || |||||||||||||| |||||||||||||| |
Sbjct: 70 aataagacgagtgatcaaacagtacaaacaaaaactcaaaatcccttatattatgggatg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||| |||||||||||||| || ||| |||||||||||||| |||||||||||||||
Sbjct: 170 aataaaacgagtggtcaaacagtgcaagcaaaaactcaaaatcctttatattatgggacg 229
Query: 244 gagggagta 252
|||||||||
Sbjct: 230 gagggagta 238
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||| |||||||||| ||||||||| | |||||||||||
Sbjct: 238 tactccctccgtcccataatataaaggattttgagtttttgcttg-cactgtttgaccac 180
Query: 71 tcgtcttattcaaa 84
|||| |||||||||
Sbjct: 179 tcgttttattcaaa 166
Score = 67.9 bits (34), Expect = 7e-11
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||| |||||||||||||||||||||||| ||||| |||| | ||||||| |||
Sbjct: 2 tactccctccatcccataatataagggattttgagtttttgtttgt-actgtttgatcac 60
Query: 71 tcgtcttatt 80
||||||||||
Sbjct: 61 tcgtcttatt 70
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||| | || ||| |||||||||||||| |||||||||||||||
Sbjct: 166 aataagacgagtggtcaaccagtgcaagcaaaaactcaaaatccgttatattatgggacg 225
Query: 244 gagggagta 252
|||||||||
Sbjct: 226 gagggagta 234
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||| |||||||||| ||||||||| | || ||||||||
Sbjct: 234 tactccctccgtcccataatataacggattttgagtttttgcttg-cactggttgaccac 176
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 175 tcgtcttattcaaa 162
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 42 tgtttgaccactcgtcttattcaaa 66
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || |||||||| |||||||| ||||||||| ||||||
Sbjct: 173 aataagacgagtggtcaaacagtgcaagtaaaatatcaaaatctcttatattaggggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||| ||||||| || |||| |||| |||||||| ||||||||| |||||
Sbjct: 70 aataagacgagcggtcaaatagtgtaagcaaaatatcaaaatcccttatattaggggaca 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||| ||||| |||||||||||||||||| |||||||| | | ||||||| |
Sbjct: 2 tactccctctgtcccctaatataagggattttgatattttgctt-acactatttgaccgc 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| || ||| |||||||||||||| | ||||||||||||||
Sbjct: 70 aataagacgagtagtcaaacgttacaagcaaaaactcaaaatcccctatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||
Sbjct: 2 tactccctccgtcccataatataggggattttgagtttttgcttgtaa-cgtttgactac 60
Query: 71 tcgtcttatt 80
||||||||||
Sbjct: 61 tcgtcttatt 70
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| ||||| |||| ||||||||||| ||||| || ||||||||||
Sbjct: 242 tactccctccgtcccacaatatgagggcttttgagtttttgcttgcaac-gtttgaccac 184
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||| | || ||||| |||||||
Sbjct: 174 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaagccctcatattgtgggacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||| ||||||| | |||||||||||||||||| |||||||| |||||||
Sbjct: 70 aataagacgagtagtcaaacgttgcaagtaaaaactcaaaatcccttatattctgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/77 (90%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataaggga-ttttgag-ttttgcttgtaagtgtttgacc 68
|||||| |||||||||| ||||||||||| ||||||| |||||||||||| | ||||||
Sbjct: 241 ttactccctccgtcccacaatataagggatttttgagtttttgcttgtaa-cgcttgacc 183
Query: 69 actcgtcttattcaaat 85
|||||||||||||||||
Sbjct: 182 actcgtcttattcaaat 166
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaa-tcacttatattatgggac 242
|||||||||||||||||| | || ||| |||||||||||| || |||||||| ||||||
Sbjct: 171 aataagacgagtggtcaagcgttacaagcaaaaactcaaaaatcccttatattgtgggac 230
Query: 243 ggagggagtaa 253
|||||||||||
Sbjct: 231 ggagggagtaa 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||||||||| |||| || ||||||| ||
Sbjct: 2 tactccctccgtcccagaatataagggattttgagtttttacttgcaac-gtttgactac 60
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 61 tcgtcttattcaa 73
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||||||| ||| || ||||| |||||||| ||||||||||||||||
Sbjct: 175 aataagacgagtggtcaaatggtacaaacaaaaaatcaaaatctcttatattatgggacg 234
Query: 244 gagggagta 252
|||||||||
Sbjct: 235 gagggagta 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||| ||| || ||| ||||| |||||||| ||||||||||||||||
Sbjct: 70 aataagacgaatggtcgaacagtgcaagcaaaaaatcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||||||||||| ||||||||| | |||| |||||
Sbjct: 2 tactccctccgtcccataatataagggattttgattttttgcttg-cactgttcgaccat 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 65.9 bits (33), Expect = 3e-10
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||||||||||||| |||||||| ||||| |||| | |||||||||
Sbjct: 243 tactccctccgtcccataatataagagattttgattttttgtttgt-accatttgaccac 185
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| || || ||||||||
Sbjct: 184 tcgtcttattcaaaaaaattgtgcaaata 156
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||| ||||||| |||||| |||||| |||||||||||||| ||||||||||||||||
Sbjct: 69 aataaaacgagtg-tcaaacgttataagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | |||| ||||||||||||| |||||||| |||||||
Sbjct: 173 aataagacgagtggtcaaacgttgtaagcgaaaactcaaaatcccttatattgtgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||||||||| |||| || ||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttgagttttcgcttacaa-cgtttgaccac 183
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagtttt 50
||||| |||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 21 cgtcccataatataagggattttgagttttgcttgtaagtgtttgaccactcgtcttatt 80
|||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 10 cgtcccataatataagggattttgagtttttgtttgcagcgtttgaccactcgtcttatt 69
Query: 81 caaat 85
|||||
Sbjct: 70 caaat 74
Score = 81.8 bits (41), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||||||||| | ||| || ||||||||||
Sbjct: 241 tactccctccgtcccaaaatataagggattttgagtttttgattgcaac-gtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||| ||||||||
Sbjct: 182 tcgtcttattcaaatcttttttgcaaata 154
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | || |||||||||||||| |||||||| |||||||
Sbjct: 173 aataagacgagtggtcaaacgttgcaatcaaaaactcaaaatcccttatattttgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | || |||||||||||||| |||||||||||||||
Sbjct: 69 aataagacgagtggtcaaacgctgcaaacaaaaactcaaaatcccttatattatgggac- 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||| |||||||||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 70 aataaaacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacg 11
Query: 244 gagggagt 251
||||||||
Sbjct: 10 gagggagt 3
Score = 75.8 bits (38), Expect = 3e-13
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 13 actctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccact 71
|||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgcttgcaa-cgtttgaccact 61
Query: 72 cgtcttattc 81
||| ||||||
Sbjct: 62 cgttttattc 71
Score = 73.8 bits (37), Expect = 1e-12
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||||||||| | ||| || ||||||||||
Sbjct: 240 tactccctccgtcccacaatataagggattttgagtttttgtttgcaac-gtttgaccac 182
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 181 tcgtcttattcaa 169
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | || |||||||||||||| |||||||| |||||||
Sbjct: 172 aataagacgagtggtcaaacgttgcaaacaaaaactcaaaatcccttatattgtgggacg 231
Query: 244 gagggagta 252
|||||||||
Sbjct: 232 gagggagta 240
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatat-aagggattttgagtttt-gcttgtaagtgtttgacca 69
||||| |||||||||||||||| ||||||||||||||||| ||||| || |||||||||
Sbjct: 2 tactccctccgtcccataatattaagggattttgagtttttgcttgcaac-gtttgacca 60
Query: 70 ctcgtcttattcaaa 84
|||||||||||||||
Sbjct: 61 ctcgtcttattcaaa 75
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcactta-tattatgggac 242
|||||||||||||||||||| | ||| |||||||||||||| |||| |||||||||||
Sbjct: 71 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttaatattatgggac 12
Query: 243 ggagggagta 252
||||||||||
Sbjct: 11 ggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||||||||||||| || |||| |||||||
Sbjct: 175 aataagacgagtggtcaaacgttgcaagaaaaaactcaaaatccct--tattgtgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 64/73 (87%), Gaps = 4/73 (5%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttg-cttgtaagtgtttgaccac 70
||||| |||||||||| |||| |||||||||||||||| |||| || ||||||||||
Sbjct: 241 tactccctccgtcccacaata--agggattttgagttttttcttgcaac-gtttgaccac 185
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 184 tcgtcttattcaa 172
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgacca 69
|||||| |||| |||||||||||||||||||||||| ||||| ||| || ||||||||||
Sbjct: 1 ttactccctccatcccataatataagggattttgagtttttgtttgcaa-tgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | || |||||||||||||| |||||||||||||| |
Sbjct: 70 aataagacgagtggtcaaacattgcaaacaaaaactcaaaatcccttatattatgggatg 11
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 10 gagggagtaa 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||||||||||||||||| ||||| || |||||||||
Sbjct: 240 tactccctccgtcccacaatataagggattttgagtttttgcttgcaaca-tttgaccac 182
Query: 71 tcgtcttattcaa 83
|||||||||||||
Sbjct: 181 tcgtcttattcaa 169
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||
Sbjct: 172 aataagacgagtggtcaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacg 231
Query: 244 gagggagta 252
|||||||||
Sbjct: 232 gagggagta 240
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 75.8 bits (38), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||| ||||||||||||||||| |||||| ||||| || |||||||||||
Sbjct: 2 tactccctccgtcttataatataagggattttaagtttttgcttgcaa-tgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 69.9 bits (35), Expect = 2e-11
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||| ||||||||||||||||| || |||||||||||| |||||| |||
Sbjct: 242 tactccctccgtcttataatataagggattttaagtttttgcttgtaa-cgtttgaacac 184
Query: 71 tcgtcttattcaaat 85
|||||||||||||||
Sbjct: 183 tcgtcttattcaaat 169
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| ||||||| |||||| |||||||||| ||||
Sbjct: 70 aataagacgagtggtcaaacattgcaagcaaaaacttaaaatcccttatattataagacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| |||||| || ||| ||||||| |||||| |||||||||| ||||
Sbjct: 174 aataagacgagtgttcaaacgttacaagcaaaaacttaaaatcccttatattataagacg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
>RF01062;MIR812;AAAA02005420.1/17308-17480 39946:Oryza sativa
Indica Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 3 ttttgcttgta-gtgtttgaccactcgtcttattcaaagaatttatacaaata 54
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
||||||||||||||||||||||| |||| |||||
Sbjct: 139 aataagacgagtggtcaaaccgtgtaagcaaaaa 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaa 84
||||||||||||||||||||||||
Sbjct: 158 gtttgaccactcgtcttattcaaa 135
>RF01062;MIR812;AP008218.1/21453608-21453436 39947:Oryza sativa
Japonica Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||| ||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttttgcttataa-tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| |||||| ||||||
Sbjct: 35 aataagacgagtggtcaaacattataagcaaaaac 1
>RF01062;MIR812;AC145322.2/13007-12834 39947:Oryza sativa Japonica
Group
Length = 174
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttttgcttgtac-tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 35 aataagacgagtggtcaaacagtacaagcaaaaac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaat 85
||||| ||||||||||||||||||||
Sbjct: 160 tgtttaaccactcgtcttattcaaat 135
>RF01062;MIR812;AC122143.2/133354-133183 39947:Oryza sativa
Japonica Group
Length = 172
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||| ||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttttgcttataa-tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 62 tttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||| |||||
Sbjct: 156 tttgaccactcgtcttattcaaaaaattt 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| |||||| ||||||
Sbjct: 35 aataagacgagtggtcaaacattataagcaaaaac 1
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||| ||||||||||||| | ||| |||||||||||||| |||||||| |||||||
Sbjct: 70 aataagccgagtggtcaaacgttgcaagcaaaaactcaaaatctcttatattgtgggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 185 ataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacgg 244
||||||||||||||||||| | || | |||||||||||||| ||| |||| ||||||||
Sbjct: 175 ataagacgagtggtcaaacattgtacgcaaaaactcaaaatcccttgtattgtgggacgg 234
Query: 245 agggagta 252
||||||||
Sbjct: 235 agggagta 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||| |||||||| ||||||||| ||||||||| || ||||||||||
Sbjct: 2 tactccctccgtcccacaatataagagattttgagtttttgcttgcaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaa 84
||| ||||||||||
Sbjct: 61 tcggcttattcaaa 74
Score = 58.0 bits (29), Expect = 7e-08
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| |||| ||||||||||||||||| || | || |||||||||||
Sbjct: 242 tactccctccgtcccacaatacaagggattttgagtttttgcgtacaa-tgtttgaccac 184
Query: 71 tcgtcttat 79
|||||||||
Sbjct: 183 tcgtcttat 175
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa Indica
Group
Length = 242
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| ||||||||||||| ||||||||||| ||||
Sbjct: 70 aataagacgagtggtcaaacgttggaagcgaaaactcaaaatcccttatattatgagacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| ||||||| ||||||||||||||||||||||||| |||| || ||||||||||
Sbjct: 2 tactccctccgtctcataatataagggattttgagttttcgcttccaa-cgtttgaccac 60
Query: 71 tcgtcttattcaaataattt 90
||||||||||| || |||||
Sbjct: 61 tcgtcttattcgaaaaattt 80
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||||||||| || |||||| | |||||| |||||||
Sbjct: 174 aataagacgagtggtcaaacgttgtaagtaaaa-cttaaaatcccctatattgtgggacg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 58.0 bits (29), Expect = 7e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttgtaagtgtttgaccact 71
||||| |||||||||| |||||| |||||||| |||||| ||| || |||||||||||
Sbjct: 241 tactccctccgtcccacaatataggggattttaagttttacttacaac-gtttgaccact 183
Query: 72 cgtcttatt 80
|||||||||
Sbjct: 182 cgtcttatt 174
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || |||| ||||| | |||||| |||||||||||| |||
Sbjct: 70 aataagacgaatggtcaaacagtgtaagcaaaaagttaaaatcccttatattatggaacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||| ||||||||||| || ||||||||| | |||||| |||||||||||| |||
Sbjct: 174 aataagaccagtggtcaaacagtgcaagtaaaaagttaaaatcccttatattatggaacg 233
Query: 244 gagggag 250
|||||||
Sbjct: 234 gagggag 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| |||||| ||||||||||||||||||| | |||||||| | ||||||||||
Sbjct: 2 tactccctccgttccataatataagggattttaactttttgctt-acactgtttgaccat 60
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 48.1 bits (24), Expect = 6e-05
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccactcgtct 76
|||||| ||||||||||||||||||| | |||| |||| | |||||||||||| ||||
Sbjct: 236 ctccgttccataatataagggattttaactttttacttg-cactgtttgaccactggtct 178
Query: 77 tattcaaa 84
||||||||
Sbjct: 177 tattcaaa 170
>RF01062;MIR812;AAAA02010849.1/28893-28725 39946:Oryza sativa
Indica Group
Length = 169
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 tttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||
Sbjct: 153 tttgaccactcgtcttattcaaa 131
>RF01062;MIR812;AAAA02023157.1/33234-33395 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaataatttgtgcaaata 54
>RF01062;MIR812;AACV01006174.1/18299-18135 39947:Oryza sativa
Japonica Group
Length = 165
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AC120983.6/43339-43170 39947:Oryza sativa Japonica
Group
Length = 170
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||| ||| |||||
Sbjct: 156 tgtttgaccactcgtcttattaaaaaaattt 126
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| || ||| ||||||
Sbjct: 136 aataagacgagtggtcaaacagtttaaataaaaa 169
>RF01062;MIR812;AP005164.3/83305-83475 39947:Oryza sativa Japonica
Group
Length = 171
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaataatttgtgcaaata 54
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa Japonica
Group
Length = 156
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| |||||||||||| || || ||||||| |||||| ||||||||||||||||
Sbjct: 73 aataagatgagtggtcaaacgttacaaacaaaaacttaaaatcccttatattatgggacg 14
Query: 244 gagggagtaaat 255
|||||||||||
Sbjct: 13 aagggagtaaat 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || ||||| ||||||| |||||||| |||||||
Sbjct: 84 aataagacgagtggtcaaacgttacaaacaaaaaatcaaaattccttatattgtgggacg 143
Query: 244 gagggagta 252
|||||||||
Sbjct: 144 gagggagta 152
Score = 61.9 bits (31), Expect = 4e-09
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgacca 69
|||||| || ||||||||||||||||||||||| || ||||| |||||| |||||||||
Sbjct: 4 ttactcccttcgtcccataatataagggattttaagtttttgtttgtaa-cgtttgacca 62
Query: 70 ctcgtcttatt 80
||| |||||||
Sbjct: 63 ctcatcttatt 73
Score = 60.0 bits (30), Expect = 2e-08
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagtttt-gcttgtaagtgtttgaccac 70
||||| |||||||||| ||||||||| ||||||| |||| | |||||| ||||||||||
Sbjct: 152 tactccctccgtcccacaatataaggaattttgattttttgtttgtaac-gtttgaccac 94
Query: 71 tcgtcttatt 80
||||||||||
Sbjct: 93 tcgtcttatt 84
>RF01062;MIR812;AAAA02011985.1/3215-3046 39946:Oryza sativa Indica
Group
Length = 170
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 13 agtgtttgatcactcgtcttattcaaaaaatttatgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| ||| ||| |||||
Sbjct: 136 aataagacgagtggtcaaacagtacaagcaaaaa 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttatt 80
||||||||||| |||||||||||||||||||||
Sbjct: 168 ttttgcttgtac-tgtttgaccactcgtcttatt 136
>RF01062;MIR812;AAAA02030099.1/1816-1987 39946:Oryza sativa Indica
Group
Length = 172
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 13 agtgtttgaccactcgtcttattaaaaaaatttatgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaataattt 90
|||||||||||||| ||||||||| |||||
Sbjct: 157 gtttgaccactcgttttattcaaaaaattt 128
>RF01062;MIR812;AACV01004102.1/7215-7042 39947:Oryza sativa
Japonica Group
Length = 174
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AACV01003611.1/24763-24932 39947:Oryza sativa
Japonica Group
Length = 170
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 13 agtgtttgaccgctcgtcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;FJ581045.1/130260-130099 4529:Oryza rufipogon
Length = 162
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaa 83
||||||||||||||||||||||||
Sbjct: 148 tgtttgaccactcgtcttattcaa 125
>RF01062;MIR812;AP008213.1/19404924-19404759 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 13 agtgtttgaccactcgttttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AP003833.3/6318-6483 39947:Oryza sativa Japonica
Group
Length = 166
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||| |||||||||||||||| |||||
Sbjct: 152 tgtttgactactcgtcttattcaaaaaattt 122
>RF01062;MIR812;AAAA02022058.1/13808-13644 39946:Oryza sativa
Indica Group
Length = 165
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||||| |||||||||||||
Sbjct: 13 agtgtttgaccactcgtcttattcaaaatatttatgcaaata 54
>RF01062;MIR812;ABXC01000470.1/249858-249686 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
|||||||||||||||||||||||| ||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttatgcaaa 52
>RF01062;MIR812;AAAA02014507.1/22435-22605 39946:Oryza sativa
Indica Group
Length = 171
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 3 ttttgcttgtac-tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| ||| ||| |||||
Sbjct: 35 aataagacgagtggtcaaacagtacaagcaaaaa 2
>RF01062;MIR812;AACV01007529.1/6429-6597 39947:Oryza sativa
Japonica Group
Length = 169
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 3 ttttgcttgtac-tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 155 tgtttgaccactcgtcttattcaaa 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 35 aataagacgagtggtcaaacagtacaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 135 aataagacgagtggtcaaacagtacaaggaaaaac 169
>RF01062;MIR812;ABRL01000119.1/394-558 65489:Oryza barthii
Length = 165
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||| || ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 3 ttttgcttgcaa-tgtttgaccactcgtcttattcaaaaaatttatacaaata 54
>RF01062;MIR812;AL606649.4/23902-23735 4530:Oryza sativa (rice)
Length = 168
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 3 ttttgcttgtat-tgtttgaccactcgtcttatttaattaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 154 tgtttgaccattcgtcttattcaaaaaattt 124
>RF01062;MIR812;AP008216.1/8863369-8863537 39947:Oryza sativa
Japonica Group
Length = 169
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| |||||||||||||||| ||||||||| |||||||| |||||
Sbjct: 3 ttttgcttgta-gtgtttgaccactcgttttattcaaaaaatttatgtaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 58 agtgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||| ||| |||||
Sbjct: 157 agtgtttgaccactcgtcttattaaaaaaattt 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||||||||||
Sbjct: 135 aataagacgagtggtcaaacactacaagtaaaaac 169
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || ||| |||| |||||||| ||||||||| ||||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaatgtcaaaatcccttatattaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || || |||| |||||||| ||||||||||||||||
Sbjct: 167 aataagacgagtggtcaaacagtgcaaccaaaatgtcaaaatc-cttatattatgggacg 225
Query: 244 gagggagta 252
|||||||||
Sbjct: 226 gagggagta 234
Score = 60.0 bits (30), Expect = 2e-08
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||| |||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttgacattttgcttg-cactgtttgaccat 60
Query: 71 tcgtcttatt 80
||||||||||
Sbjct: 61 tcgtcttatt 70
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||||||||||||||||||| ||||||| ||||| ||| | |||||||||||
Sbjct: 234 tactccctccgtcccataatataagg-attttgacattttggttgcac-tgtttgaccac 177
Query: 71 tcgtcttattcaaa 84
||||||||||||||
Sbjct: 176 tcgtcttattcaaa 163
>RF01058;MIR806;AAAA02000336.1/19576-19334 39946:Oryza sativa Indica
Group
Length = 243
Score = 65.9 bits (33), Expect = 3e-10
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||| ||| |||||||||||||||||| |||| |||| | || ||||||||
Sbjct: 242 tactccctccgccccctaatataagggattttgacattttccttgcac-tgattgaccac 184
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||||||| ||||| ||||||||
Sbjct: 183 tcgtcttattcaaaaaatttgtgcaaata 155
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||| | || ||| |||| |||||||| ||||||||| ||| ||
Sbjct: 174 aataagacgagtggtcaatcagtgcaaggaaaatgtcaaaatcccttatattagggggcg 233
Query: 244 gagggagta 252
|||||||||
Sbjct: 234 gagggagta 242
Score = 52.0 bits (26), Expect = 4e-06
Identities = 52/58 (89%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 28 taatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtcttattcaaa 84
|||||||||||||||||| ||||||||| | |||||||||| ||||||||||||||
Sbjct: 18 taatataagggattttgacattttgcttgcac-tgtttgaccattcgtcttattcaaa 74
>RF01058;MIR806;AP005719.3/82355-82591 39947:Oryza sativa Japonica
Group
Length = 237
Score = 65.9 bits (33), Expect = 3e-10
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||| |||| |||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 236 tactccctccatcccctaatataagggattttgacattttgcttgcat-tgtttgaccac 178
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||| ||| |||| ||||||||
Sbjct: 177 tcgtcttattaaaaatatttgtgcaaata 149
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||||||||| |||||| || || |||| |||||||| ||||||||| ||||||
Sbjct: 70 aataagacgagtgatcaaacagtgcaaacaaaatgtcaaaatcccttatattaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| | ||| |||| |||||||| ||||||||| |||| |
Sbjct: 168 aataagacgagtggtcaaacaatgcaagcaaaatgtcaaaatcccttatattaggggatg 227
Query: 244 gagggagta 252
|||||||||
Sbjct: 228 gagggagta 236
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga 45
||||| ||||||||| ||||||||||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttga 35
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| |||| |||| |||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 241 tactccctccatcccctaatataagggattttgacattttgcttgcac-tgtttgaccac 183
Query: 71 tcgtcttattcaaataatttatgcaaata 99
|||||||||| ||| | ||| ||||||||
Sbjct: 182 tcgtcttatttaaaaattttgtgcaaata 154
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||| |||||||| ||||||||| |||| |
Sbjct: 173 aataagacgagtggtcaaacagtgcaagcaaaatgtcaaaatcccttatattaggggatg 232
Query: 244 gagggagta 252
|||||||||
Sbjct: 233 gagggagta 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga 45
||||| || |||||| ||||||||||||||||||
Sbjct: 2 tactcccttcgtcccctaatataagggattttga 35
>RF01062;MIR812;ABXC01004642.1/156730-156901 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaa 97
||||||||||||||||||||||| ||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttatgcaaa 52
>RF01062;MIR812;AAAA02013220.1/9377-9208 39946:Oryza sativa Indica
Group
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 156 tgtttgaccattcgtcttattcaaaaaattt 126
>RF01062;MIR812;AAAA02026756.1/22794-22628 39946:Oryza sativa
Indica Group
Length = 167
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttaaccactcgtcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;FJ581044.1/94847-94685 4538:Oryza glaberrima
(African rice)
Length = 163
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcttcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AAAA02014561.1/38934-38770 39946:Oryza sativa
Indica Group
Length = 165
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01006742.1/9335-9168 39947:Oryza sativa
Japonica Group
Length = 168
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| |||||||||
Sbjct: 35 aataagacgagtggtcaaacagtacgagtaaaaac 1
>RF01062;MIR812;AAAA02003683.1/564-736 39946:Oryza sativa Indica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| || ||||||||||
Sbjct: 35 aataagacgagtggtcaaacagtgtaagtaaaaa 2
>RF01062;MIR812;AACV01010066.1/9500-9324 39947:Oryza sativa
Japonica Group
Length = 177
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP004810.3/106040-105868 39947:Oryza sativa
Japonica Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
||||||| |||||||||||| ||| |||||||||
Sbjct: 139 aataagatgagtggtcaaacagtacaagtaaaaa 172
>RF01062;MIR812;AC092750.2/41559-41389 39947:Oryza sativa Japonica
Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP004006.5/73610-73440 39947:Oryza sativa Japonica
Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AC145127.1/1589042-1588874 39947:Oryza sativa
Japonica Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| |||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccacttgtcttattcaaaaaatttatgcaaata 54
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaataattt 90
|||||||||||||||||||||||| |||||
Sbjct: 154 gtttgaccactcgtcttattcaaaaaattt 125
>RF01062;MIR812;AAAA02031899.1/51828-51658 39946:Oryza sativa
Indica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP005682.2/21743-21906 39947:Oryza sativa Japonica
Group
Length = 164
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcatcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AACV01017886.1/9494-9326 39947:Oryza sativa
Japonica Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||| ||||||||||||||||||| |||||
Sbjct: 155 tgtttaaccactcgtcttattcaaaaaattt 125
>RF01062;MIR812;AP008211.1/20028947-20029112 39947:Oryza sativa
Japonica Group
Length = 166
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 tttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||
Sbjct: 150 tttgaccactcgtcttattcaaa 128
>RF01062;MIR812;AP008215.1/19303621-19303451 39947:Oryza sativa
Japonica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| |||||||| |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgtaaata 54
>RF01062;MIR812;AACV01007519.1/11495-11664 39947:Oryza sativa
Japonica Group
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgttttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||| ||||||||||||||||||| |||||
Sbjct: 156 tgtttaaccactcgtcttattcaaaaaattt 126
>RF01062;MIR812;AC210470.1/112176-112011 4538:Oryza glaberrima
(African rice)
Length = 166
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||||||||||
Sbjct: 35 aataagacgagtggtcaaacagtgcaagtaaaaac 1
>RF01062;MIR812;AAAA02019268.1/24495-24327 39946:Oryza sativa
Indica Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01006444.1/8361-8528 39947:Oryza sativa
Japonica Group
Length = 168
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttatgcaaata 54
>RF01062;MIR812;AP004038.2/116802-116640 39947:Oryza sativa
Japonica Group
Length = 163
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP004308.3/114559-114394 39947:Oryza sativa
Japonica Group
Length = 166
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| |||||||| |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgtaaata 54
>RF01062;MIR812;AACV01006659.1/3082-3250 39947:Oryza sativa
Japonica Group
Length = 169
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||| |||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttgactactcgtcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AACV01026200.1/8892-8727 39947:Oryza sativa
Japonica Group
Length = 166
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01014767.1/38057-37887 39947:Oryza sativa
Japonica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP003210.3/62731-62562 39947:Oryza sativa Japonica
Group
Length = 170
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| | ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttattcagaaaatttatgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 156 tgtttgaccactcgtcttattcaaaaaattt 126
>RF01062;MIR812;AACV01001613.1/3443-3271 39947:Oryza sativa
Japonica Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02008793.1/16167-16338 39946:Oryza sativa
Indica Group
Length = 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaa-aatttatgcaaata 53
>RF01062;MIR812;AACV01012074.1/7964-7793 39947:Oryza sativa
Japonica Group
Length = 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AC097368.3/118302-118472 39947:Oryza sativa
Japonica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||| ||||||||||||||||| |||||
Sbjct: 157 tgtttgatcactcgtcttattcaaaaaattt 127
>RF01062;MIR812;AC134232.2/9319-9477 39947:Oryza sativa Japonica
Group
Length = 159
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttatgcaaata 54
>RF01062;MIR812;AP006843.2/22978-23150 39947:Oryza sativa Japonica
Group
Length = 173
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttatgcaaata 54
>RF01062;MIR812;FJ581047.1/96798-96635 4536:Oryza nivara
Length = 164
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccactcatcttattcaaaaaatttatgcaaata 54
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaa 83
||||||||||||||||||||||||
Sbjct: 150 tgtttgaccactcgtcttattcaa 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||||||||||
Sbjct: 130 aataagacgagtggtcaaacaatacaagtaaaaac 164
>RF01062;MIR812;AP008210.1/23697340-23697170 39947:Oryza sativa
Japonica Group
Length = 171
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttatgcaaata 54
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccac 70
||||| ||||||||| || ||||||||||||||| ||||||||| | ||||||||||
Sbjct: 2 tactccctccgtcccctagtataagggattttgacattttgcttgcac-tgtttgaccat 60
Query: 71 tcgtcttattcaaataattt 90
|||||||||||||| |||||
Sbjct: 61 tcgtcttattcaaaaaattt 80
Score = 60.0 bits (30), Expect = 2e-08
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||| |||||||||||||||||| ||||||| | | |||||||||||
Sbjct: 239 tactccctccgtcccttaatataagggattttgatattttgctcg-cactgtttgaccac 181
Query: 71 tcgtcttattcaaa 84
|| |||||||||||
Sbjct: 180 tcatcttattcaaa 167
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| ||||||||| || ||| |||| |||||||| |||||| || ||||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaatgtcaaaatcccttatactaggggacg 11
Query: 244 gagggagta 252
|||||||||
Sbjct: 10 gagggagta 2
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||||| |||||||||||| || || |||| |||||||| ||||||||| ||||||
Sbjct: 171 aataagatgagtggtcaaacagtgcgagcaaaatatcaaaatcccttatattaagggacg 230
Query: 244 gagggagta 252
|||||||||
Sbjct: 231 gagggagta 239
>RF01058;MIR806;AP004672.3/59439-59196 39947:Oryza sativa Japonica
Group
Length = 244
Score = 63.9 bits (32), Expect = 1e-09
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgaccac 70
||||| ||||||||| |||||||||||||||||| ||||||||| || | ||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttgacattttgcttgcaa-tatttgaccat 60
Query: 71 tcgtcttattcaaataattt 90
|| ||||||||||| |||||
Sbjct: 61 tcatcttattcaaaaaattt 80
Score = 61.9 bits (31), Expect = 4e-09
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttga-gttttgcttgtaagtgtttgacca 69
|||||| ||||||||| ||||| |||||||||||| |||||||||| | | ||||||||
Sbjct: 244 ttactccctccgtcccctaatacaagggattttgatattttgcttgt-actatttgacca 186
Query: 70 ctcgtcttattcaaa 84
||||||||||||||
Sbjct: 185 ttcgtcttattcaaa 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||| |||||||| ||| ||| |||| |||||||| ||| ||||| ||||||
Sbjct: 175 aataagacgaatggtcaaatagtacaagcaaaatatcaaaatcccttgtattaggggacg 234
Query: 244 gagggagtaa 253
||||||||||
Sbjct: 235 gagggagtaa 244
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 219 tcaaaatcacttatattatgggacggagggagta 252
|||||||| ||||||||| |||||||||||||||
Sbjct: 35 tcaaaatcccttatattaggggacggagggagta 2
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 221 aaaatcacttatattatgggacggagggagta 252
||||||||||||||||||||||||||||||||
Sbjct: 36 aaaatcacttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggatttt 43
||||||||||| |||||||||||||||||||||
Sbjct: 118 ttactctctccatcccataatataagggatttt 86
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggatttt 43
||||| ||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtcccataatataagtgatttt 36
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 9 tattactctctccgtcccataatataagggattttg 44
|||||||| |||||||||||||||||||||||||||
Sbjct: 2 tattactccctccgtcccataatataagggattttg 37
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| ||||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagtaa 4
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 219 tcaaaatcacttatattatgggacggagggagta 252
|||||||| |||||||||||||||||||||||||
Sbjct: 81 tcaaaatctcttatattatgggacggagggagta 114
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttga 45
||||| ||||||||||||||||||| ||||||||
Sbjct: 114 tactccctccgtcccataatataagagattttga 81
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa Japonica
Group
Length = 118
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 9 tattactctctccgtcccataatataagggattttg 44
|||||||| |||||||||||||||||||||||||||
Sbjct: 117 tattactccctccgtcccataatataagggattttg 82
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| ||||||||||||||||||||||||||
Sbjct: 82 caaaatcccttatattatgggacggagggagtaa 115
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
>RF00906;MIR1122;AP002865.1/97444-97566 39947:Oryza sativa Japonica
Group
Length = 123
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 9 tattactctctccgtcccataatataagggattttg 44
|||||||| |||||||||||||||||||||||||||
Sbjct: 122 tattactccctccgtcccataatataagggattttg 87
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| ||||||||||||||||||||||||||
Sbjct: 87 caaaatcccttatattatgggacggagggagtaa 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 gtcccataatataagggattttg 44
|||||||||||||||||||||||
Sbjct: 15 gtcccataatataagggattttg 37
>RF01062;MIR812;ABXC01001803.1/39100-38927 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| |||||||| |||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttatggaaata 54
>RF01062;MIR812;ABXC01001535.1/75415-75584 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaa 84
||||||||||||||||||||||||
Sbjct: 155 gtttgaccactcgtcttattcaaa 132
>RF01062;MIR812;ABXC01005019.1/19673-19844 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaa 84
||||||||||||||||||||||||
Sbjct: 157 gtttgaccactcgtcttattcaaa 134
>RF01062;MIR812;AAAA02016384.1/23964-23792 39946:Oryza sativa
Indica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaat 98
|||||||||| |||||||||||||| |||||||||||||
Sbjct: 15 tgtttgaccattcgtcttattcaaaaaatttatgcaaat 53
>RF01062;MIR812;AACV01023720.1/2532-2702 39947:Oryza sativa
Japonica Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| |||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaatatttatgcaaata 54
>RF01062;MIR812;AACV01023550.1/1070-1239 39947:Oryza sativa
Japonica Group
Length = 170
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaat 98
||||||||||||||||||||||||| |||||||| ||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttatgtaaat 53
>RF01062;MIR812;AAAA02041948.1/2219-2054 39946:Oryza sativa Indica
Group
Length = 166
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| | ||||||||||||
Sbjct: 14 gtttgaccactcgtcttattcaaaaattttatgcaaata 52
>RF01062;MIR812;AP005011.3/6297-6125 39947:Oryza sativa Japonica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 17 gtttgaccactcgtcttattcaaaaaatttgtgcaaata 55
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgt 206
|||||||||||||||||||||||
Sbjct: 36 aataagacgagtggtcaaaccgt 14
>RF01062;MIR812;AP008208.1/33215908-33216080 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02011555.1/18196-18026 39946:Oryza sativa
Indica Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaat 98
|||||||||| |||||||||||||| |||||||||||||
Sbjct: 15 tgtttgaccattcgtcttattcaaaaaatttatgcaaat 53
>RF01058;MIR806;AACV01007258.1/13217-12976 39947:Oryza sativa
Japonica Group
Length = 242
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| | ||||||||||||
Sbjct: 193 gtttgaccactcgtcttattcaaaaattttatgcaaata 155
>RF01058;MIR806;AAAA02020138.1/22175-21915 39946:Oryza sativa Indica
Group
Length = 261
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaat 98
|||||||||| |||||||||||||| |||||||||||||
Sbjct: 212 tgtttgaccattcgtcttattcaaaaaatttatgcaaat 174
>RF01058;MIR806;AP004223.2/47345-47106 39947:Oryza sativa Japonica
Group
Length = 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaat 98
|||||||||| |||||||||||||| |||||||||||||
Sbjct: 192 tgtttgaccattcgtcttattcaaaaaatttatgcaaat 154
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataattta 91
|||||||||| |||||||||||||| ||||||
Sbjct: 49 tgtttgaccattcgtcttattcaaaaaattta 80
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 9 tattactctctccgtcccataatataagggatttt 43
|||||||| ||||||||||||||||||||||||||
Sbjct: 132 tattactccctccgtcccataatataagggatttt 98
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagtaa 253
|||||| ||||||||||||||||||||||||||
Sbjct: 98 aaaatcccttatattatgggacggagggagtaa 130
>RF01062;MIR812;AAAA02010398.1/3247-3417 39946:Oryza sativa Indica
Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||| ||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02021102.1/3361-3526 39946:Oryza sativa Indica
Group
Length = 166
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
|||||| |||||||||||||||| ||||||||||||||
Sbjct: 18 tttgactactcgtcttattcaaaaaatttatgcaaata 55
>RF01062;MIR812;AAAA02022591.1/3265-3095 39946:Oryza sativa Indica
Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 13 agtgtttgatcactcggcttattcaaaaaatttatgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 63 ttgaccactcgtcttattcaaa 84
||||||||||||||||||||||
Sbjct: 155 ttgaccactcgtcttattcaaa 134
>RF01062;MIR812;AP003630.3/158976-158806 39947:Oryza sativa
Japonica Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 13 agtgtttgaccactcatcttatttaaaaaatttatgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 58 agtgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||||
Sbjct: 159 agtgtttgaccactcgtcttattcaaa 133
>RF01062;MIR812;EU095985.1/5029-5187 39946:Oryza sativa Indica
Group
Length = 159
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 66 accactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||| ||||||||||||||
Sbjct: 21 accactcgtcttattcaaaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 tttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||
Sbjct: 143 tttgaccactcgtcttattcaaa 121
>RF01062;MIR812;CR855227.1/90408-90580 4530:Oryza sativa (rice)
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 13 agtgtttgaccactcgttttattcaaaaagtttatgcaaata 54
>RF01062;MIR812;AP005541.3/92329-92157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaa 96
||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 3 ttttgcttgtat-tgtttgaccactcgtcttattcaaaaaatttgtgcaa 51
>RF01062;MIR812;AACV01016974.1/17663-17832 39947:Oryza sativa
Japonica Group
Length = 170
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||| ||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02000165.1/13009-12838 39946:Oryza sativa
Indica Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| ||||| ||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01010328.1/26690-26522 39947:Oryza sativa
Japonica Group
Length = 169
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 tttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||| ||| ||||||||||||||
Sbjct: 17 tttgaccactcgtcttatttaaaaaatttatgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 155 tgtttgaccactcgtcttattcaaaaaattt 125
>RF01062;MIR812;AAAA02022366.1/8310-8477 39946:Oryza sativa Indica
Group
Length = 168
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 58 agtgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||| |||||||||||| ||||||| ||||||
Sbjct: 13 agtgtttgaccacttgtcttattcaaaaaatttatacaaata 54
Score = 56.0 bits (28), Expect = 3e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataattt 90
||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 166 ttttgcttgta-gtgtttgaccactcgtcttatttaaaaaattt 124
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa Indica
Group
Length = 110
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 10 attactctctccgtcccataatataagggatttt 43
||||||| ||||||||||||||||||||||||||
Sbjct: 108 attactccctccgtcccataatataagggatttt 75
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagtaa 253
|||||| ||||||||||||||||||||||||||
Sbjct: 75 aaaatcccttatattatgggacggagggagtaa 107
>RF00906;MIR1122;AC226807.1/78158-78249 63629:Oryza minuta
Length = 92
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttga 45
|||||||| |||||||||||||||||||||||||
Sbjct: 5 tactctcttcgtcccataatataagggattttga 38
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 219 tcaaaatcacttatattatgggacggagggagta 252
|||||||| |||||||||||||||| || |||||
Sbjct: 38 tcaaaatcccttatattatgggacgaagagagta 5
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 13 actctctccgtcccataatataagggattt 42
||||||||||||||||||||||||||||||
Sbjct: 6 actctctccgtcccataatataagggattt 35
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| |||||||||||||||||| |||||||
Sbjct: 121 caaaatctcttatattatgggacggaaggagtaa 154
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 aaatcacttatattatgggacggagggagt 251
||||| ||||||||||||||||||| ||||
Sbjct: 35 aaatcccttatattatgggacggagagagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttg 44
|||||||||||||||||| |||||||
Sbjct: 146 tccgtcccataatataagagattttg 121
>RF00906;MIR1122;CR855038.1/146938-146783 4530:Oryza sativa (rice)
Length = 156
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagtaaa 254
|||||| |||||||||||||||||||||||||||
Sbjct: 121 aaaatcccttatattatgggacggagggagtaaa 154
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggatttt 43
|||||| ||||||||||||||||||||||||||
Sbjct: 153 ttactccctccgtcccataatataagggatttt 121
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||| ||||||||||
Sbjct: 37 caaaatcccttatattatgggatggagggagta 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||| ||||||||||||||||||||||
Sbjct: 5 tactccctccatcccataatataagggattttg 37
>RF01062;MIR812;ABXC01007119.1/3043-3215 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
|||||||||||||||||||||||| ||||| ||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttgtgcaaa 52
>RF01062;MIR812;ABXC01006208.1/52786-52612 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttatacaaa 52
>RF01062;MIR812;ABXC01001828.1/232689-232518 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
|||||||||||||||||||||||| ||||| ||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttgtgcaaa 52
>RF01062;MIR812;ABXC01000219.1/31418-31589 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
||||||||||| |||||||||||| ||||||||||||
Sbjct: 16 gtttgaccacttgtcttattcaaaaaatttatgcaaa 52
>RF01062;MIR812;ABXC01003795.1/241919-241747 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
|||||| ||||||||||||||||| ||||||||||||
Sbjct: 16 gtttgatcactcgtcttattcaaaaaatttatgcaaa 52
>RF01062;MIR812;ABXC01005818.1/40080-40250 4558:Sorghum bicolor
(sorghum)
Length = 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
||||||||||| |||||||||||| ||||||||||||
Sbjct: 16 gtttgaccacttgtcttattcaaaaaatttatgcaaa 52
>RF01062;MIR812;ABXC01000232.1/198823-198993 4558:Sorghum bicolor
(sorghum)
Length = 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttatgcaaa 97
||||||||||||||||||||| || ||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcgaaaaatttatgcaaa 52
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 63 ttgaccactcgtcttattcaaataatt 89
|||||||||||||||||||||| ||||
Sbjct: 156 ttgaccactcgtcttattcaaaaaatt 130
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 3 ttttgcttgtaac-gtttgaccactcgtcttattcaaattttttttgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattc 81
|||||||||||| |||||||||||||||||||||
Sbjct: 171 ttttgcttgtaac-gtttgaccactcgtcttattc 138
>RF01062;MIR812;AP002900.2/82321-82150 39947:Oryza sativa Japonica
Group
Length = 172
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 3 ttttgcttgtac-tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02000336.1/19369-19541 39946:Oryza sativa
Indica Group
Length = 173
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 63 ttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||| ||||| ||||||||
Sbjct: 18 ttgaccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP003204.3/98585-98754 39947:Oryza sativa Japonica
Group
Length = 170
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 3 ttttgcttgtac-tgtttgaccacacgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02011117.1/4184-4354 39946:Oryza sativa Indica
Group
Length = 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||||||| ||||| || |||||
Sbjct: 3 ttttgcttgtac-tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 54
>RF01062;MIR812;AP008218.1/7146476-7146309 39947:Oryza sativa
Japonica Group
Length = 168
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttat 92
||||||||||||||||||||||||| |||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02009039.1/27863-28030 39946:Oryza sativa
Indica Group
Length = 168
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||| ||||||||||||||||||||||||| |||| ||||||||
Sbjct: 3 ttttgcttgtac-tgtttgaccactcgtcttattcaaaaaattcgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 35 aataagacgagtggtcaaacagtacaagcaaaaac 1
>RF01062;MIR812;AAAA02034956.1/41821-41993 39946:Oryza sativa Indica
Group
Length = 173
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaa 216
|||||||||||||||||||| ||||||||||||
Sbjct: 35 aataagacgagtggtcaaacagtataagtaaaa 3
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaataaatttgtgcaaata 54
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa Indica
Group
Length = 125
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttg 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatcccttatattatgggacggagggagta 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 222 aaatcacttatattatgggacggagggagta 252
||||| |||||||||||||||| ||||||||
Sbjct: 35 aaatcccttatattatgggacgaagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattt 42
||||| || ||||||||||||||||||||||
Sbjct: 5 tactcccttcgtcccataatataagggattt 35
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 161 tactccctccgtcccataatataagggattttg 129
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 129 caaaatcccttatattatgggacggagggagta 161
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| ||||||||||||||||||||||||
Sbjct: 37 caaaatcctttatattatgggacggagggagta 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtcccataatataaaggattttg 37
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttg 44
|||||| |||||||||||||||||| ||||||||
Sbjct: 118 ttactccctccgtcccataatataaaggattttg 85
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| |||||||||||||||||||||||||
Sbjct: 85 caaaatcctttatattatgggacggagggagtaa 118
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttg 44
|||||||||||||||||||||||||||
Sbjct: 82 ctccgtcccataatataagggattttg 56
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||| ||||
Sbjct: 56 caaaatcccttatattatgggacggaggtagta 88
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttg 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatcccttatattatgggacggagggagta 153
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
|||||||||||||||| ||||||||||||||||
Sbjct: 37 caaaatcacttatattttgggacggagggagta 5
>RF00906;MIR1122;AACV01010673.1/7331-7451 39947:Oryza sativa
Japonica Group
Length = 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggatttt 43
||||||||||| |||||||||||||||||||||
Sbjct: 4 ttactctctccatcccataatataagggatttt 36
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggatttt 43
||||| ||||||||||||||||||||||||||
Sbjct: 117 tactccctccgtcccataatataagggatttt 86
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
|||||| |||||||||||||||||||||||||
Sbjct: 86 aaaatcccttatattatgggacggagggagta 117
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||||||||||||||| |||||||||||||
Sbjct: 82 caaaatcacttatattatgagacggagggagta 114
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccataatataag 29
>RF00906;MIR1122;AP008210.1/20744899-20745028 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
|||||||||| ||||||||||||||||||||||
Sbjct: 126 tactctctccatcccataatataagggattttg 94
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataagggattttg 89
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 89 caaaatcccttatattatgggacggagggagta 121
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatctcttatattatgggacggagggagta 153
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| ||||||||||||||||||| |||||||
Sbjct: 153 tactccctccgtcccataatataagagattttg 121
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| |||||||| ||||| |||||||||||
Sbjct: 37 caaaatcccttatattttgggatggagggagtaa 4
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggattttg 44
|||||| |||| ||||| ||||||||||||||||
Sbjct: 4 ttactccctccatcccaaaatataagggattttg 37
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttg 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatcccttatattatgggacggagggagta 153
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
|||||||||||| ||||||||||||||||||||
Sbjct: 5 tactctctccgttccataatataagggattttg 37
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 117 tactccctccgtcccataatataagggattttg 85
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 85 caaaatcccttatattatgggacggagggagta 117
>RF00906;MIR1122;AAAA02017484.1/6201-6342 39946:Oryza sativa Indica
Group
Length = 142
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtcccataatataagggattttg 106
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 106 caaaatcccttatattatgggacggagggagta 138
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 attactctctccgtcccataatataagggatttt 43
||||||| |||||||||||||||||| |||||||
Sbjct: 3 attactccctccgtcccataatataacggatttt 36
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 229 ttatattatgggacggagggagtaa 253
|||||||||||||||||||||||||
Sbjct: 28 ttatattatgggacggagggagtaa 4
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 137 tactccctccgtcccataatataagggattttg 105
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 105 caaaatcccttatattatgggacggagggagta 137
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| ||||||||||||||| |||||||||
Sbjct: 37 caaaatcgcttatattatgggacagagggagta 5
>RF00906;MIR1122;AAAA02020252.1/431-548 39946:Oryza sativa Indica
Group
Length = 118
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 82 caaaatcgcttatattatgggacggagggagta 114
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| ||||||||||||||||||| |||||||
Sbjct: 114 tactccctccgtcccataatataagcgattttg 82
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 223 aatcacttatattatgggacggagggagta 252
|||| ||||||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacagagggagta 5
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggatt 41
||||| ||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtcccataatataagggatt 34
>RF00906;MIR1122;AACV01022590.1/16657-16788 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||||||||||||||||||| |||||||||
Sbjct: 37 caaaatcacttatattatgggacagagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaaat 255
||||||| ||||||||||||||| || |||||||||
Sbjct: 96 caaaatcccttatattatgggactgatggagtaaat 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 gtcccataatataagggattttg 44
|||||||||||||||||||||||
Sbjct: 118 gtcccataatataagggattttg 96
>RF00906;MIR1122;AC140005.2/42932-42813 39947:Oryza sativa Japonica
Group
Length = 120
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 116 tactccctccgtcccataatataagggattttg 84
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 84 caaaatcccttatattatgggacggagggagta 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 219 tcaaaatcacttatattatgggacggagggagtaa 253
|||||||| |||||||||| ||||||||||||||
Sbjct: 38 tcaaaatcctttatattatgagacggagggagtaa 4
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataagggattttg 81
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 81 caaaatcccttatattatgggacggagggagta 113
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||| ||||||||||||||||||
Sbjct: 37 caaaatcccttataatatgggacggagggagta 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccatattataagggattttg 37
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
|||||| ||||||||||||||||||||||||||
Sbjct: 37 caaaattacttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 108 tactccctccgtcccataatataagggattttg 76
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 76 caaaatcccttatattatgggacggagggagta 108
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagtaa 253
|||||| ||||||||||||||||||||||||||
Sbjct: 105 aaaatctcttatattatgggacggagggagtaa 137
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggatttt 43
|||||| ||||||||||||||||||| ||||||
Sbjct: 137 ttactccctccgtcccataatataagagatttt 105
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 87 caaaatcgcttatattatgggacggagggagta 119
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| ||||||||||||||||||| |||||||
Sbjct: 119 tactccctccgtcccataatataagcgattttg 87
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 223 aatcacttatattatgggacggagggagta 252
|||| ||||||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacagagggagta 5
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggatt 41
||||| ||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtcccataatataagggatt 34
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
Group
Length = 165
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||| ||||||||
Sbjct: 161 tactccctccgtcccataatataaaggattttg 129
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| ||||||||||||||||||||||||
Sbjct: 129 caaaatcctttatattatgggacggagggagta 161
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtcccataatataagggattttg 96
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 96 caaaatcccttatattatgggacggagggagta 128
>RF00906;MIR1122;AP004123.3/86345-86268 39947:Oryza sativa Japonica
Group
Length = 78
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
|||||| ||||||||||||||||||||||||||
Sbjct: 42 caaaataacttatattatgggacggagggagta 74
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 tattactctctccgtcccataatataag 36
||||||| ||||||||||||||||||||
Sbjct: 2 tattactttctccgtcccataatataag 29
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggag 246
|||||| ||||||||||||||||||||
Sbjct: 37 caaaataacttatattatgggacggag 11
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa Japonica
Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
||||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcaattatattatgggacggagggagta 153
>RF00906;MIR1122;AAAA02032829.1/30310-30153 39946:Oryza sativa
Indica Group
Length = 158
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 154 tactccctccgtcccataatataagggattttg 122
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 122 caaaatcccttatattatgggacggagggagta 154
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggattttg 44
|||||||||||||||||||||||||||
Sbjct: 11 ctccgtcccataatataagggattttg 37
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||| ||||
Sbjct: 37 caaaatcccttatattatgggacggaggaagta 5
>RF00906;MIR1122;AACV01024035.1/14460-14553 39947:Oryza sativa
Japonica Group
Length = 94
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 90 tactccctccgtcccataatataagggattttg 58
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 58 caaaatcccttatattatgggacggagggagta 90
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tcccataatataagggattttg 44
||||||||||||||||||||||
Sbjct: 16 tcccataatataagggattttg 37
>RF00906;MIR1122;AP008211.1/23389262-23389121 39947:Oryza sativa
Japonica Group
Length = 142
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtcccataatataagggattttg 106
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 106 caaaatcccttatattatgggacggagggagta 138
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 10 attactctctccgtcccataatataagggattttg 44
||||||| |||||||||||||||||| ||||||||
Sbjct: 3 attactccctccgtcccataatataacggattttg 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatccgttatattatgggacggagggagtaa 4
>RF00906;MIR1122;AACV01018737.1/24214-24370 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttg 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatcccttatattatgggacggagggagta 153
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa Japonica
Group
Length = 119
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttg 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ttactctctccgtcccataatataagggattttg 44
|||||| |||||||||||||||||| ||||||||
Sbjct: 116 ttactccctccgtcccataatataaaggattttg 83
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagtaa 253
||||||| |||||||||||||||||||||||||
Sbjct: 83 caaaatcctttatattatgggacggagggagtaa 116
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttg 121
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 121 caaaatcccttatattatgggacggagggagta 153
>RF01062;MIR812;ABXC01006771.1/63849-64020 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 54
>RF01062;MIR812;ABXC01001786.1/383060-382891 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaataatttat 92
|||||||||||||||||||||||| |||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaaatttat 47
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaa 84
||||||||||||||||||||||||
Sbjct: 157 gtttgaccactcgtcttattcaaa 134
>RF01062;MIR812;AAAA02010584.1/17577-17417 39946:Oryza sativa
Indica Group
Length = 161
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 9 tgtttgaccactcgtcttattcagaaaatttgtgcaaata 48
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 147 tgtttgaccactcgtcttattcaaa 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 127 aataagacgagtggtcaaacagtacaaggaaaaac 161
>RF01062;MIR812;AAAA02015458.1/1627-1463 39946:Oryza sativa Indica
Group
Length = 165
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 151 tgtttgaccactcgtcttattcaaaaaattt 121
>RF01062;MIR812;AAAA02018823.1/3058-2886 39946:Oryza sativa Indica
Group
Length = 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccattcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02012042.1/11416-11586 39946:Oryza sativa
Indica Group
Length = 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02032164.1/21937-21766 39946:Oryza sativa Indica
Group
Length = 172
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 62 tttgaccactcgtcttattcaaataatttatg 93
||||||||||||||||||||||| ||||||||
Sbjct: 156 tttgaccactcgtcttattcaaaaaatttatg 125
>RF01062;MIR812;AAAA02007873.1/12057-11888 39946:Oryza sativa
Indica Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaa-aatttatgcaaata 53
>RF01062;MIR812;AAAA02019865.1/3288-3116 39946:Oryza sativa Indica
Group
Length = 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||||||||||||||||| ||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaattttttttgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 159 tgtttgaccaatcgtcttattcaaaaaattt 129
>RF01062;MIR812;AAAA02010958.1/12937-13105 39946:Oryza sativa
Indica Group
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| |||||||||| | ||||||||||||||
Sbjct: 15 tgtttgaccacttgtcttattcagaaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||| ||| |||||
Sbjct: 155 tgtttgaccactcgtcttattaaaaaaattt 125
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| || ||| ||||||
Sbjct: 135 aataagacgagtggtcaaacagtttaaataaaaa 168
>RF01062;MIR812;AAAA02020475.1/5119-5286 39946:Oryza sativa Indica
Group
Length = 168
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02016979.1/20786-20614 39946:Oryza sativa
Indica Group
Length = 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||| || ||||||||||| ||||||||||||||
Sbjct: 15 tgtttgaccattcatcttattcaaaaaatttatgcaaata 54
>RF01062;MIR812;AC108763.2/77495-77325 39947:Oryza sativa Japonica
Group
Length = 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 157 tgtttgaccactcgtcttattcaaa 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| ||| || |||||||
Sbjct: 137 aataagacgagtggtcaaacagtacaaataaaaac 171
>RF01062;MIR812;AP004573.3/131013-131180 39947:Oryza sativa
Japonica Group
Length = 168
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgttttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01025153.1/2236-2069 39947:Oryza sativa
Japonica Group
Length = 168
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccacttgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP004683.3/131559-131728 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| |||||||||||| ||||||||| ||||
Sbjct: 15 tgtttgaccacttgtcttattcaaaaaatttatgcgaata 54
>RF01062;MIR812;AAAA02030709.1/63622-63785 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 15 tgtttgacccctcgtcttattcaaaaaatttatacaaata 54
Score = 48.1 bits (24), Expect = 6e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaaataattt 90
||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 162 ttttgcttgtac-tgtttgaccacccgtcttattcaaaaaattt 120
>RF01062;MIR812;AAAA02015456.1/3859-3694 39946:Oryza sativa Indica
Group
Length = 166
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 152 tgtttgaccactcgtcttattcaaaaaattt 122
>RF01062;MIR812;ABRL01000916.1/8876-9046 65489:Oryza barthii
Length = 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02023107.1/20286-20117 39946:Oryza sativa
Indica Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| || || ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaaattgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattca 82
|||||||||||||||||||||||
Sbjct: 156 tgtttgaccactcgtcttattca 134
>RF01062;MIR812;AP008217.1/23465636-23465805 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttgtgcaaata 54
>RF01062;MIR812;CR855044.1/89288-89120 4530:Oryza sativa (rice)
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 13 tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 52
>RF01062;MIR812;AAAA02010127.1/41698-41525 39946:Oryza sativa
Indica Group
Length = 174
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttggccactcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AP008216.1/12539745-12539914 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtctcattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AC144558.1/118736-118904 39947:Oryza sativa
Japonica Group
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 185 ataagacgagtggtcaaaccgtataagtaaa 215
||||||||||||||||||| || ||||||||
Sbjct: 136 ataagacgagtggtcaaacagtgtaagtaaa 166
>RF01062;MIR812;AACV01004894.1/15378-15544 39947:Oryza sativa
Japonica Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||||||||||
Sbjct: 35 aataagacgagtggtcaaacagtgcaagtaaaaac 1
>RF01062;MIR812;AP008213.1/24161869-24161701 39947:Oryza sativa
Japonica Group
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| | ||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaattttgtgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 155 tgtttgaccactcgtcttattcaaaaaattt 125
>RF01062;MIR812;AAAA02010849.1/11238-11401 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| | ||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaagtttgtgcaaata 54
>RF01062;MIR812;AP003616.4/66392-66223 39947:Oryza sativa Japonica
Group
Length = 170
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccattcgtcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02037034.1/4467-4301 39946:Oryza sativa Indica
Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcatcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AACV01017823.1/27508-27345 39947:Oryza sativa
Japonica Group
Length = 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcatcttattcaaaaaatttgtgcaaata 54
>RF01062;MIR812;AAAA02018122.1/7870-8038 39946:Oryza sativa Indica
Group
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
|||||||||||| |||||||||||| |||||||| |||||
Sbjct: 15 tgtttgaccacttgtcttattcaaaaaatttatgtaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 155 tgtttgaccactcgtcttattcaaa 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||||||||||
Sbjct: 135 aataagacgagtggtcaaacagtgcaagtaaaaac 169
>RF01062;MIR812;AACV01020588.1/577-411 39947:Oryza sativa Japonica
Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| |||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaagatttgtgcaaata 54
>RF01062;MIR812;AL606668.2/67226-67060 39947:Oryza sativa Japonica
Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||| |||||||||||||||||| ||||||||||||||
Sbjct: 15 tgttttaccactcgtcttattcaacaaatttatgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
||||||||||||||| |||| |||||||||||||
Sbjct: 35 aataagacgagtggtaaaacaatataagtaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||| ||||||||||||||| |||||
Sbjct: 153 tgtttgacctctcgtcttattcaaaaaattt 123
>RF01062;MIR812;AP008218.1/12955264-12955092 39947:Oryza sativa
Japonica Group
Length = 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttatacaaata 54
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
|||||||||||||||||||| ||| |||||||||
Sbjct: 35 aataagacgagtggtcaaacagtacaagtaaaaa 2
>RF01062;MIR812;AAAA02028258.1/19405-19571 39946:Oryza sativa
Indica Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgca 95
|||||||||| |||||||||||||| ||||||||||
Sbjct: 15 tgtttgaccattcgtcttattcaaaaaatttatgca 50
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 61 gtttgaccactcgtcttattcaaataattt 90
|||||||||||||||||||||||| |||||
Sbjct: 152 gtttgaccactcgtcttattcaaaaaattt 123
>RF01062;MIR812;AAAA02003932.1/22015-21845 39946:Oryza sativa
Indica Group
Length = 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcgtcttatttaaaaaatttgtgcaaata 54
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
||||||||||||||||||||||||| |||||
Sbjct: 157 tgtttgaccactcgtcttattcaaaaaattt 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaac 218
|||||||||||||||||||| || ||| |||||||
Sbjct: 137 aataagacgagtggtcaaacagtgtaaataaaaac 171
>RF01062;MIR812;AP008208.1/5140425-5140590 39947:Oryza sativa
Japonica Group
Length = 166
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgatcactcgtcttattcaaaaaatttgtgcaaata 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 152 tgtttgaccattcgtcttattcaaaaaattt 122
>RF01062;MIR812;AP000836.1/44398-44566 39947:Oryza sativa Japonica
Group
Length = 169
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 15 tgtttgaacactcgtcttatttaaaaaatttatgcaaata 54
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 155 tgtttgaccactcgtcttattcaaa 131
>RF01062;MIR812;AAAA02024303.1/16106-16272 39946:Oryza sativa
Indica Group
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 15 tgtttgaccactcgtcttattcaaaaaatttgtgtaaata 54
>RF01062;MIR812;AAAA02005657.1/17106-17277 39946:Oryza sativa
Indica Group
Length = 172
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 15 tgtttgaccactcatcttattcaaaaaatttgtgcaaata 54
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaa 217
||||||| |||||||||||| ||||||| |||||
Sbjct: 35 aataagatgagtggtcaaacagtataagcaaaaa 2
