miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008217.1/6570444-6570554 39947:Oryza sativa
Japonica Group
Length = 111
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 59 tgtccagattcatagctaaaaattgctatattttgggacgg 99
>RF00906;MIR1122;AAAA02015795.1/16369-16480 39946:Oryza sativa
Indica Group
Length = 112
Score = 69.9 bits (35), Expect = 6e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 tccagattcatagctaaaaattgctatattttgggacgg 100
>RF00906;MIR1122;AC108498.2/94665-94556 39947:Oryza sativa
Japonica Group
Length = 110
Score = 69.9 bits (35), Expect = 6e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 60 tccagattcatagctaaaaattgctatattttgggacgg 98
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 69.9 bits (35), Expect = 6e-12
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtagt 92
|||||||||||||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 53 tgtccagattcatagctaaaaattgttatattttgggacggaggtagtagt 3
>RF00906;MIR1122;AP008218.1/6871224-6871113 39947:Oryza sativa
Japonica Group
Length = 112
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 46 ccagattcataactaaaaattgctatattttgggacgg 83
||||||||||| ||||||||||||||||||||||||||
Sbjct: 50 ccagattcatagctaaaaattgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 67.9 bits (34), Expect = 2e-11
Identities = 68/77 (88%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaatgtccagattcataactaa 61
||||| |||||||| |||||||||| |||| || |||| |||||||||||||| ||||
Sbjct: 92 tactccctccgtcccaaaatataagcatttctagctatg--tgtccagattcatagctaa 35
Query: 62 aaattgctatattttgg 78
|||||||||||||||||
Sbjct: 34 aaattgctatattttgg 18
>RF00906;MIR1122;AK243439.1/1155-1266 39947:Oryza sativa Japonica
Group
Length = 112
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 46 ccagattcataactaaaaattgctatattttgggacgg 83
||||||||||| ||||||||||||||||||||||||||
Sbjct: 63 ccagattcatagctaaaaattgctatattttgggacgg 100
>RF00906;MIR1122;AC105363.2/93214-93105 39947:Oryza sativa
Japonica Group
Length = 110
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 47 cagattcataactaaaaattgctatattttggg 79
|||||||||||||||||||||||||||||||||
Sbjct: 62 cagattcataactaaaaattgctatattttggg 94
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 47 cagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||||||||||||||||||||| ||||
Sbjct: 49 cagattcataactaaaaattgctatattttggaacgg 13
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tccagattcatagctaaaaatacttatattttgggacgg 98
>RF00906;MIR1122;AAAA02007751.1/21104-20995 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 47 cagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||||||||| |||||||||||||||
Sbjct: 62 cagattcataactaaaaattgttatattttgggacgg 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| |||||||| |||||||||||||||
Sbjct: 51 tccagattcatagctaaaaatgcttatattttgggacgg 13
>RF00906;MIR1122;AACV01007111.1/2148-2260 39947:Oryza sativa
Japonica Group
Length = 113
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 61 tgtctagattcataactaaaagttgctatattttgggacgg 101
>RF00906;MIR1122;AB107361.1/132-43 39947:Oryza sativa Japonica
Group
Length = 90
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggac 81
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 53 tgtctagattcatagctaaaaattgctatattttgggac 15
>RF00906;MIR1122;AAAA02021653.1/16520-16652 39946:Oryza sativa
Indica Group
Length = 133
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataagattttt 33
|||||||||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcctaaaatataagattttt 35
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 41 aatgtccagattcataactaaaaattgctatattttgggacgg 83
|||||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 58 aatgtctagattcatagctaaaagttgctatattttgggacgg 100
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 61.9 bits (31), Expect = 1e-09
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaatgtccagattcataactaa 61
||||| |||||||| |||||||||| ||||||| ||| ||| | ||||||||| ||||
Sbjct: 92 tactccctccgtcccaaaatataagcatttttagctattaattt--agattcatagctaa 35
Query: 62 aaattgctatattttgggacgg 83
||||| ||||||||||||||||
Sbjct: 34 aaattactatattttgggacgg 13
>RF00906;MIR1122;AP008213.1/16335065-16334954 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 5e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
|||||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgactatattttgggacggaggtagtag 4
>RF00906;MIR1122;AACV01016108.1/6300-6411 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 5e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
|||||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 60 tgtccagattcatagctaaaaatgactatattttgggacggaggtagtag 109
>RF00906;MIR1122;AAAA02020043.1/26999-26890 39946:Oryza sativa
Indica Group
Length = 110
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 58 tgtccagattcatagctaaaagttgttatattttgggacgg 98
>RF00906;MIR1122;AP004339.3/80660-80546 39947:Oryza sativa
Japonica Group
Length = 115
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaagttgttatattttgggacgg 13
>RF00906;MIR1122;AP005830.4/102931-103039 39947:Oryza sativa
Japonica Group
Length = 109
Score = 58.0 bits (29), Expect = 2e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg-ggtagtagt 92
||||||| |||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 59 tccagatacatagctacaaattgctatattttgggacggaggtagtagt 107
>RF00906;MIR1122;AACV01008227.1/1-122 39947:Oryza sativa Japonica
Group
Length = 122
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 51 tgtccagattcatagctaaaaatagctatattttggaacgg 11
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 cagattcataactaaaaattgctatattttgggacgg 83
|||||| ||| ||||||||||||||||||||||||||
Sbjct: 52 cagatttatagctaaaaattgctatattttgggacgg 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatatttt 76
|||||||||| |||| ||||||||||||||||||
Sbjct: 53 tgtccagatttataattaaaaattgctatatttt 20
>RF00906;MIR1122;AACV01005190.1/14557-14668 39947:Oryza sativa
Japonica Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| | ||||||| ||||||||||||||||
Sbjct: 53 tgtccagattcatagccaaaaattactatattttgggacgg 13
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||| |||||||||||| ||||||
Sbjct: 60 tgtccagattcatagctaaaagttgctatattttaggacgg 100
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| | |||| |||||||||||||||||||
Sbjct: 53 tgtccagattcatagccaaaagttgctatattttgggacgg 13
>RF00906;MIR1122;AP005569.2/105921-105796 39947:Oryza sativa
Japonica Group
Length = 126
Score = 58.0 bits (29), Expect = 2e-08
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 17 taaaatataag-atttttatttatgaat-gtccagattcataactaaaaattgctatatt 74
||||||||||| ||||||| ||||||| ||||||||||||| |||||||| ||||||
Sbjct: 46 taaaatataagcatttttagctatgaatcgtccagattcatagctaaaaatgcttatatt 105
Query: 75 ttgggacgg 83
|||||||||
Sbjct: 106 ttgggacgg 114
>RF00906;MIR1122;AP008210.1/8188364-8188253 39947:Oryza sativa
Japonica Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 60 tgtccagattcatagctaaaagttgttatattttgggacgg 100
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/84 (85%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaa--tgtccagattcataact 59
||||| ||||||||||||||||||| ||||||| |||||| || |||||||||| ||
Sbjct: 5 tactccctccgtcctaaaatataagcatttttagctatgaatctggacagattcatagct 64
Query: 60 aaaaattgctatattttgggacgg 83
|||||| |||||||||||||||
Sbjct: 65 aaaaatacttatattttgggacgg 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/84 (85%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaat--gtccagattcataact 59
||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||
Sbjct: 96 tactccctccgtcccaaaatataagtatttttagctatgaatctgtccagattcatagct 37
Query: 60 aaaaattgctatattttgggacgg 83
|||||| |||||||| ||||||
Sbjct: 36 aaaaatgcttatattttaggacgg 13
>RF00906;MIR1122;AC129719.2/18417-18306 39947:Oryza sativa Japonica
Group
Length = 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| | |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatagccaaaaattgttatattttgggacgg 100
>RF00906;MIR1122;AAAA02012175.1/18488-18377 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg-ggtagtagt 92
||||||||||||||| |||||| ||| |||||| |||||||| |||||||||
Sbjct: 59 atgtccagattcatagctaaaagttgttatattctgggacggaggtagtagt 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 45 tccagattcataactaaaaattgctatattttgggacg 82
|||||||||||| |||||||| ||||||||||||||
Sbjct: 51 tccagattcatagctaaaaatgcttatattttgggacg 14
>RF00906;MIR1122;AP008208.1/16739175-16739286 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgg 78
|||| ||||||||| |||||||||||||||||||||
Sbjct: 60 tgtctagattcatagctaaaaattgctatattttgg 95
>RF00906;MIR1122;AC097627.1/66504-66615 4530:Oryza sativa (rice)
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggac 81
||||||||||||||| |||||| ||| |||||||||||||
Sbjct: 54 atgtccagattcatagctaaaagttgttatattttgggac 15
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg-ggtagtagt 92
||||||||||||||| |||||| ||| |||||| |||||||| |||||||||
Sbjct: 59 atgtccagattcatagctaaaagttgttatattctgggacggaggtagtagt 110
>RF00906;MIR1122;AP008214.1/27846174-27846285 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 44 gtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 61 gtccagattcatagccaaaaactgctatattttgggacgg 100
>RF00906;MIR1122;AAAA02018512.1/8556-8445 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 44 gtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||| | |||| |||||||||||||||||||
Sbjct: 52 gtccagattcatagccaaaagttgctatattttgggacgg 13
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||||||||| |||||||||||||||
Sbjct: 62 tccagattcataactaaaaatgcttatattttgggacgg 100
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
||||||||||||||| |||||| ||| |||||||| |||||| ||||||||
Sbjct: 54 atgtccagattcatagctaaaagttgttatattttaggacggaggtagtag 4
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa Japonica
Group
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtagt 92
|||||||||||| | |||||| ||| ||||||||||||||| |||||||||
Sbjct: 60 tgtccagattcaaagctaaaagttgttatattttgggacggaggtagtagt 110
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggacgg 13
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg 83
||||| ||||||||| |||||| |||||||||||| ||||||
Sbjct: 59 atgtctagattcatagctaaaagttgctatattttaggacgg 100
>RF00906;MIR1122;AACV01005176.1/8457-8346 39947:Oryza sativa
Japonica Group
Length = 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaat 43
||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 tactccctccgtcctaaaatataagtatttttagttatgaat 46
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||||||||||| |||||||| ||||||
Sbjct: 53 tgtccagattcataactaaaaatacttatattttaggacgg 13
>RF00906;MIR1122;AAAA02004447.1/3435-3324 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttggga 80
|||||||||||||| | |||| ||||||||||||||||
Sbjct: 60 tgtccagattcatagccaaaagttgctatattttggga 97
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa
Indica Group
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatatttt 76
|||||||||| |||| ||||||||||||||||||
Sbjct: 48 tgtccagatttataattaaaaattgctatatttt 81
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 47 cagattcataactaaaaattgctatattttgggacgg 83
|||||| ||| ||||||||| ||||||||||||||||
Sbjct: 49 cagatttatagctaaaaattactatattttgggacgg 13
>RF00906;MIR1122;AAAA02025856.1/38296-38434 39946:Oryza sativa
Indica Group
Length = 139
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataaga 28
||||||||||||||||||||||||||
Sbjct: 135 tactctctccgtcctaaaatataaga 110
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctaaaaattgctatattttgggacgg 83
||||||||||||||||||||||||||
Sbjct: 38 ctaaaaattgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02032490.1/12014-11907 39946:Oryza sativa
Indica Group
Length = 108
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacg 82
||||||||||||||| |||||||| ||||||||||||||
Sbjct: 54 atgtccagattcatagctaaaaatgcttatattttgggacg 14
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttggga 80
|||||||||||||| |||||| ||| || |||||||||
Sbjct: 56 tgtccagattcatagctaaaagttgttacattttggga 93
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatagctaaaaatgcttatattttgggacgg 100
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatagctaaaaatgcttatattttgggacgg 100
>RF00906;MIR1122;AP008210.1/30933575-30933686 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
||||||||| |||| ||| || |||||||||||||||||||
Sbjct: 53 tgtccagatacatagctagaagttgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgattatattttgggacgg 13
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgtttatattttgggacgg 13
>RF00906;MIR1122;AACV01021941.1/12785-12674 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 47 cagattcataactaaaaattgctatattttgggacgg 83
|||||||||| |||||| ||| |||||||||||||||
Sbjct: 49 cagattcatagctaaaagttgttatattttgggacgg 13
>RF00906;MIR1122;AAAA02024386.1/33092-33187 39946:Oryza sativa
Indica Group
Length = 96
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||| || |||| |||||| |||||||||||||||||||
Sbjct: 44 tgtccaaatacatagctaaaagttgctatattttgggacgg 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 cataactaaaaattgctatattttgggacgg 83
|||| |||||| |||||||||||||||||||
Sbjct: 43 catagctaaaagttgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| | |||| |||||||||||| ||||||
Sbjct: 60 tgtccagattcatagccaaaagttgctatatttttggacgg 100
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatagctaaaaatgcttatattttgggacgg 100
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggacgg 13
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||| ||| ||||||||| |||||
Sbjct: 57 tgtccagattcatagctaaaagttgttatattttgagacgg 97
>RF00906;MIR1122;AACV01018440.1/8398-8301 39947:Oryza sativa
Japonica Group
Length = 98
Score = 50.1 bits (25), Expect = 5e-06
Identities = 68/81 (83%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaatgtccagattcataactaa 61
||||| |||||||| ||||| |||| |||| || ||||||| | ||||||||| ||||
Sbjct: 94 tactccctccgtcccaaaatgtaagcatttctagctatgaatctggagattcatagctaa 35
Query: 62 aaattgctatattttgggacg 82
|| ||| ||||||||||||||
Sbjct: 34 aagttgttatattttgggacg 14
>RF00906;MIR1122;AACV01022357.1/4100-4210 39947:Oryza sativa
Japonica Group
Length = 111
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 59 tgtccagattcatagctaaaaatgcttatattttgggacgg 99
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 51 ttcataactaaaaattgctatattttgggacgg 83
|||||| |||||| |||||||||||||||||||
Sbjct: 68 ttcatagctaaaagttgctatattttgggacgg 100
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatacctaaaaatgcttatattttgggacgg 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||| | |||| ||| || ||||||||||||
Sbjct: 54 atgtccagattcatagccaaaagttgttacattttgggacgg 13
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggacgg 13
>RF00906;MIR1122;AACV01006837.1/19056-19167 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| | |||| ||| |||||||||||||||
Sbjct: 53 tgtccagattcatagccaaaatttgttatattttgggacgg 13
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggacgg 13
>RF00906;MIR1122;AAAA02012804.1/5494-5367 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataag 27
|||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcctaaaatataag 29
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||| ||||||||| |||||| ||| |||||||||||||||
Sbjct: 60 tgtctagattcatagctaaaagttgttatattttgggacgg 100
>RF00906;MIR1122;AP008210.1/27511419-27511308 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgtttatattttgggacgg 13
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 47 cagattcataactaaaaattgctatattttgggacgg-ggtagtagtta 94
|||||||||| | |||| ||| ||||||||||||||| |||||||||||
Sbjct: 64 cagattcatagccaaaagttgttatattttgggacggaggtagtagtta 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| |||||||| |||||||||||||||
Sbjct: 51 tccagattcatagctaaaaatacttatattttgggacgg 13
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 60 tgtccagattcatagctaaaaatgcttatattttgggacgg 100
>RF00906;MIR1122;AAAA02001100.1/19725-19807 39946:Oryza sativa
Indica Group
Length = 83
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 gtccagattcataactaaaaattgctatattttggga 80
||||||||||||| |||||| | ||||||||||||||
Sbjct: 32 gtccagattcatagctaaaagtagctatattttggga 68
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacg 82
|||||||||||||| |||||||| ||||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggacg 14
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
|||||||||||| | |||| || |||||||||||||||| ||||||||
Sbjct: 62 tccagattcatagccaaaagttactatattttgggacggaggtagtag 109
>RF00906;MIR1122;AP008210.1/31519155-31519262 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 aaaaattgctatattttgggacgg 83
||||||||||||||||||||||||
Sbjct: 73 aaaaattgctatattttgggacgg 96
>RF00906;MIR1122;ABRL01000314.1/119-8 65489:Oryza barthii
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggac 81
||||||||||||||| | |||| ||| |||||||||||||
Sbjct: 54 atgtccagattcatagccaaaagttgttatattttgggac 15
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 aaaaattgctatattttgggacgg 83
||||||||||||||||||||||||
Sbjct: 94 aaaaattgctatattttgggacgg 117
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/87 (82%), Gaps = 7/87 (8%)
Strand = Plus / Plus
Query: 2 gtactctctccgtcctaaaatataag-atttttatttatgaat------gtccagattca 54
|||||| |||||||| |||||||||| ||||||| ||||||| |||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataagcatttttagctatgaatacctgtgtccagattca 63
Query: 55 taactaaaaattgctatattttgggac 81
|| |||||||| |||||||||||||
Sbjct: 64 tagctaaaaatgtttatattttgggac 90
>RF00906;MIR1122;AACV01000380.1/14892-14782 39947:Oryza sativa
Japonica Group
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 42 atgtccagattcataactaaaaattgctatattttgggac 81
||||| |||| |||| |||||||||| |||||||||||||
Sbjct: 54 atgtctagatacatagctaaaaattgttatattttgggac 15
>RF00906;MIR1122;AC107206.4/43527-43372 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 55 taactaaaaattgctatattttgggacggggtagta 90
|||| ||||||||||||||||||||| |||| ||||
Sbjct: 117 taaccaaaaattgctatattttgggatgggggagta 152
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/87 (82%), Gaps = 7/87 (8%)
Strand = Plus / Minus
Query: 2 gtactctctccgtcctaaaatataag-atttttatttatgaat------gtccagattca 54
|||||| |||||||| |||||||||| ||||||| ||||||| |||||||||||
Sbjct: 101 gtactccctccgtcccaaaatataagcatttttagctatgaatacctgtgtccagattca 42
Query: 55 taactaaaaattgctatattttgggac 81
|| |||||||| |||||||||||||
Sbjct: 41 tagctaaaaatgcttatattttgggac 15
>RF00906;MIR1122;CR855160.1/7113-7006 4530:Oryza sativa (rice)
Length = 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 60 aaaaattgctatattttgggacgg 83
||||||||||||||||||||||||
Sbjct: 36 aaaaattgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 gtactctctccgtcctaaaatataaga 28
|||||| ||||||||||||||||||||
Sbjct: 159 gtactccctccgtcctaaaatataaga 133
>RF00906;MIR1122;AAAA02021752.1/2915-2764 39946:Oryza sativa
Indica Group
Length = 152
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggac 81
|||||| || |||||| |||||| |||||||||||||||
Sbjct: 93 tgtccatatgcataaccaaaaatagctatattttgggac 55
>RF00906;MIR1122;AAAA02021832.1/90208-90105 39946:Oryza sativa
Indica Group
Length = 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 2 gtactctctccgtcctaaaatataag-atttttatttatgaat 43
|||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 101 gtactccctccgtcctaaaatataagcatttttagctatgaat 59
>RF00906;MIR1122;AP004672.3/95919-95808 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttggga 80
|||| |||||||||| |||||| ||| ||||||||||||
Sbjct: 59 atgttcagattcatagctaaaagttgttatattttggga 97
>RF00906;MIR1122;AAAA02004006.1/11200-11089 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggac 81
|||||||||||||| |||||||| |||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggac 15
Score = 44.1 bits (22), Expect = 3e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
|||||||||||||| | |||| | |||||||||| |||||| ||||||||
Sbjct: 60 tgtccagattcatagccaaaagtggctatatttttggacggaggtagtag 109
>RF00906;MIR1122;AC097175.2/115469-115358 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| |||||| | |||||||||| ||||||
Sbjct: 51 tccagattcatagctaaaagtggctatattttaggacgg 13
>RF00906;MIR1122;AAAA02035863.1/20568-20679 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 2 gtactctctccgtcctaaaatataag-atttttatttatgaat 43
|||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 4 gtactccctccgtcctaaaatataagtatttttagctatgaat 46
Score = 46.1 bits (23), Expect = 8e-05
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 58 ctaaaaattgctatattttgggacgg-ggtagtag 91
||||| |||||||||||||||||||| ||||||||
Sbjct: 75 ctaaatattgctatattttgggacggaggtagtag 109
>RF00906;MIR1122;AACV01017910.1/30212-30123 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 cataactaaaaattgctatattttgggacgg 83
|||| |||||| |||||||||||||||||||
Sbjct: 43 catagctaaaagttgctatattttgggacgg 13
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaat 65
|||||||||||||||||||||||
Sbjct: 53 tgtccagattcataactaaaaat 31
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatata 25
|||||||||||||||||||||||
Sbjct: 5 tactctctccgtcctaaaatata 27
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 45 tccagattcataactaaaaattgctatattttgggacgg 83
|||||||||||| |||||||| |||||||||||||||
Sbjct: 62 tccagattcatagctaaaaatgtttatattttgggacgg 100
>RF00906;MIR1122;AACV01013579.1/19751-19640 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttgggac 81
|||||||||||||| |||||||| |||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttgggac 15
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ggtactctctccgtcctaaaatataag 27
|||||||||||||||| ||||||||||
Sbjct: 3 ggtactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tatattttgggacggggtagtag 91
|||||||||||||||||||||||
Sbjct: 61 tatattttgggacggggtagtag 83
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2 gtactctctccgtcctaaaatataag 27
||||||||||||||||| ||||||||
Sbjct: 242 gtactctctccgtcctataatataag 217
>RF00906;MIR1122;AAAA02007993.1/45532-45643 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaat 43
||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 108 tactccctccgtcctaaaatataagcatttttagctatgaat 67
>RF00906;MIR1122;AP002901.2/60176-60097 39947:Oryza sativa
Japonica Group
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 gtactctctccgtcctaaaatataag 27
|||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtcctaaaatataag 29
>RF00906;MIR1122;AAAA02000341.1/36626-36710 39946:Oryza sativa
Indica Group
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttggga 80
|||| |||||||||||||||||| ||||||||||||
Sbjct: 33 tgtctagattcataactaaaaatgcttatattttggga 70
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 ggtactctctccgtcctaaaatataagattttta 34
|||||||||||||||| | ||||||||| |||||
Sbjct: 3 ggtactctctccgtcccataatataagaatttta 36
>RF00906;MIR1122;AC135864.5/73183-73340 39947:Oryza sativa Japonica
Group
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataaga 28
||||| ||||||||||||||||||||
Sbjct: 154 tactccctccgtcctaaaatataaga 129
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataaga 28
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatataaga 30
>RF00906;MIR1122;AAAA02004745.1/3305-3414 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataaga 28
||||| ||||||||||||||||||||
Sbjct: 106 tactccctccgtcctaaaatataaga 81
>RF00906;MIR1122;AP003928.3/87481-87370 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataag-atttttatttatgaat 43
||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 108 tactccctccgtcctaaaatataagtatttttacctatgaat 67
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataaga 28
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatataaga 30
>RF00906;MIR1122;AC130607.2/121928-122037 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 43 tgtccagattcataactaaaaattgctatattttgggacgg-ggtagtag 91
||||||||||| || |||||| | | ||||||||||||||| ||||||||
Sbjct: 58 tgtccagattcgtagctaaaagtggttatattttgggacggaggtagtag 107
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatatttt 76
|||||||||||||| |||||| ||| ||||||||
Sbjct: 53 tgtccagattcatagctaaaagttgttatatttt 20
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataaga 28
|||||||||||||| |||||||||||
Sbjct: 5 tactctctccgtcccaaaatataaga 30
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||| |||||||| || ||||||||||||
Sbjct: 52 atgtccagattcatagctaaaaatacttacattttgggacgg 93
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 39/42 (92%), Gaps = 2/42 (4%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgc-tatattttgggacgg 83
|||||||||||||| || |||||||| |||||||||||||||
Sbjct: 53 tgtccagattcatagct-aaaattgcttatattttgggacgg 13
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tactctctccgtcctaaaatataaga 28
|||||||||||||| |||||||||||
Sbjct: 5 tactctctccgtcccaaaatataaga 30
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 42 atgtccagattcataactaaaaattgctatattttgggacgg 83
||||||||||||||| |||||||| || ||||||||||||
Sbjct: 52 atgtccagattcatagctaaaaatacttacattttgggacgg 93
>RF00906;MIR1122;AP008213.1/15559796-15559689 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctaaaaattgctatattttgggacgg 83
|||||||||| |||||||||||||||
Sbjct: 71 ctaaaaattgttatattttgggacgg 96
>RF00906;MIR1122;AP008214.1/19205826-19205903 39947:Oryza sativa
Japonica Group
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 tactctctccgtcctaaaatataaga 28
||||| ||||||||||||||||||||
Sbjct: 74 tactccctccgtcctaaaatataaga 49
>RF00906;MIR1122;AACV01013595.1/1278-1389 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 43 tgtccagattcataactaaaaattgctatattttggga 80
|||||||||||||| |||||||| ||||||||||||
Sbjct: 53 tgtccagattcatagctaaaaatgcttatattttggga 16
