miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AACV01023222.1/20864-20622 39947:Oryza sativa
Japonica Group
Length = 243
Score = 165 bits (83), Expect = 4e-40
Identities = 112/123 (91%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 43 gacaaaccctgggtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnna 101
||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 24 gacaaaccctgggtttccgtgtccaacgtttgattgtccgtcttatatgaaattttttta 83
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 84 taattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgactt 143
Query: 162 gtc 164
|||
Sbjct: 144 gtc 146
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 192 caaataagacggacggtcaaacgttggacacggaaacc 229
||||||||||||||||||||||||||||||| ||||||
Sbjct: 172 caaataagacggacggtcaaacgttggacacagaaacc 209
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 195 ataagacggacggtcaaacgttggacacggaaacc 229
||||||||||| ||||||||||||||||||||||
Sbjct: 69 ataagacggacaatcaaacgttggacacggaaacc 35
>RF01062;MIR812;AAAA02028402.1/15431-15259 39946:Oryza sativa Indica
Group
Length = 173
Score = 163 bits (82), Expect = 2e-39
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 173 gtttccgtgtccaactttgattgtccgtcttatatgaaatttttttataattcatatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 64
>RF01062;MIR812;AC137930.3/58399-58568 39947:Oryza sativa Japonica
Group
Length = 170
Score = 149 bits (75), Expect = 2e-35
Identities = 94/103 (91%)
Strand = Plus / Minus
Query: 62 tgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgtt 121
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 163 tgtccaactttgattgtccgtcttatatgaattttttttataattcgtattttcattgtt 104
Query: 122 gttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 103 gttagatgataaaacatgattaatattttatgcgtgatttgtc 61
>RF01062;MIR812;AACV01005345.1/14066-14232 39947:Oryza sativa
Japonica Group
Length = 167
Score = 147 bits (74), Expect = 1e-34
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 167 gtttccgtgtctaactttgaatgtccgtcttatatgaattttttttataattcgtatttt 108
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cattgttgttaaatgataaaacatgattaatattttatgcgtgacttgtc 58
>RF01062;MIR812;AACV01016567.1/43099-42929 39947:Oryza sativa
Japonica Group
Length = 171
Score = 147 bits (74), Expect = 1e-34
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 171 gtttccgtgttcaactttgattgtccgtcttatatgaaatttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 111 cattgttgttagatgataaaacataattaatattttatgtgtgacttgtc 62
>RF01062;MIR812;AAAA02008143.1/37666-37495 39946:Oryza sativa Indica
Group
Length = 172
Score = 143 bits (72), Expect = 2e-33
Identities = 94/104 (90%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
|||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 167 cgtgtccaactttgatagtccgtcttatatgaagtttttttataattcgtattttcattg 108
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 107 ttgttagatgataaaacatgattaatattttatacgtgacttgt 64
>RF01062;MIR812;AC118980.2/109065-108896 39947:Oryza sativa Japonica
Group
Length = 170
Score = 141 bits (71), Expect = 6e-33
Identities = 96/107 (89%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 170 gtttccgtgtccaactttgactgtccgtcttatatgaaatttttttataattcgtatttt 111
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 110 cattgttgttagatcataaaacatgattaatattttaggcgtgactt 64
>RF01062;MIR812;AAAA02023254.1/232-406 39946:Oryza sativa Indica
Group
Length = 175
Score = 139 bits (70), Expect = 2e-32
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 175 gtttccgtgtccaactttgactgtccgtcttatatgatttttttttataattcgtatttt 116
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 115 cgttgttgttagatgataaaatatgattaatattttatgcgtgacttgtc 66
>RF01062;MIR812;AACV01012712.1/9325-9155 39947:Oryza sativa Japonica
Group
Length = 171
Score = 139 bits (70), Expect = 2e-32
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 171 gtttccgtgtccaattttaattgtccgtcttatatgaaatttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 111 cattgatgttagatgataaaacatgattaatattttatgtgtgacttgtc 62
>RF01062;MIR812;AAAA02011207.1/16639-16467 39946:Oryza sativa Indica
Group
Length = 173
Score = 139 bits (70), Expect = 2e-32
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||| ||||||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttgcgtatccaactttaactgtccgtcttatatgaaatatttttataattcgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 64
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||| |||||||||
Sbjct: 37 caaataagacgaacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AAAA02021854.1/4282-4111 39946:Oryza sativa Indica
Group
Length = 172
Score = 133 bits (67), Expect = 1e-30
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| | ||||||||||||||| |||||||||| |||
Sbjct: 172 gttttcgtgtccaactttgactatccgtcttatatgaatttttcttataattcgtaattt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 66
>RF01062;MIR812;AP003735.4/10519-10356 39947:Oryza sativa Japonica
Group
Length = 164
Score = 133 bits (67), Expect = 1e-30
Identities = 99/111 (89%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnn-ataattcgtattt 113
|||||||||||||||||||| | |||||||||||| || |||||||||||||
Sbjct: 164 gtttccgtgtccaactttgactatccgtcttatataaatttttttttataattcgtattt 105
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 54
>RF01062;MIR812;AAAA02013778.1/13361-13197 39946:Oryza sativa Indica
Group
Length = 165
Score = 131 bits (66), Expect = 6e-30
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 165 gtttccgtgtctaactttgactgtccgtcttatatgaaatttttttataattcgtatttt 106
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||| |||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 105 cattgtggttagatgataaaacatggttaatattttacgcgtgacttgtc 56
>RF01062;MIR812;AAAA02025750.1/4831-4660 39946:Oryza sativa Indica
Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnn-ataattcgtatttt 114
||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||
Sbjct: 171 tttccgtgtccaactttgactgttcgtcttatatgaaattttttttataattcatatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 62
>RF01062;MIR812;AAAA02035063.1/37916-38088 39946:Oryza sativa Indica
Group
Length = 173
Score = 131 bits (66), Expect = 6e-30
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||| ||||| |||||||||||||| || ||| ||||||||||
Sbjct: 173 gttttcgtgtccaattttgactgtccgtcttatataaaacttttttatatttcgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 64
>RF01062;MIR812;AP004839.3/78751-78585 39947:Oryza sativa Japonica
Group
Length = 167
Score = 131 bits (66), Expect = 6e-30
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 62 tgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgtt 121
||||||||||| | ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 166 tgtccaactttaactgtccgtcttatatgaaaactttttataattcgtatttttattgtt 107
Query: 122 gttagatgataaaacatgattaatattttatgcgtgacttgt 163
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gttagatgataaaacatgattaatattttatgcgtgacttgt 65
>RF01062;MIR812;AAAA02006994.1/5327-5498 39946:Oryza sativa Indica
Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 172 gtttccgtgtctaactttgactgtccgtcttatatgaaattattttataatttgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 tattgttgttagatgataaaacatgattaatattttatgtgtgacttgtc 63
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||| ||||||| |||||||||||||||||||
Sbjct: 37 caaataagatggacggttaaacgttggacacggaaac 1
>RF01062;MIR812;AP002913.1/39280-39449 39947:Oryza sativa Japonica
Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 170 gttttcgtgtccaactttgactgtccgtcttatatga-ggttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cattattgttagatgataaaacatgattaatattttatgcgtgacttgt 63
>RF01062;MIR812;AAAA02008869.1/419-250 39946:Oryza sativa Indica
Group
Length = 170
Score = 127 bits (64), Expect = 9e-29
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 62 tgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgtt 121
||||||| ||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 163 tgtccaattttaactgtccgtcttatatgaaatttttttataattcgtattttcattgtt 104
Query: 122 gttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gttagatgataaaacatgattaatattttatgcgtgactt 64
>RF01062;MIR812;AACV01009421.1/27858-27673 39947:Oryza sativa
Japonica Group
Length = 186
Score = 127 bits (64), Expect = 9e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 65
Query: 161 tgtc 164
||||
Sbjct: 64 tgtc 61
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||| |||||||||
Sbjct: 37 caaataagacggacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AACV01022814.1/38520-38687 39947:Oryza sativa
Japonica Group
Length = 168
Score = 127 bits (64), Expect = 9e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||| |||||||| ||| ||||||||||
Sbjct: 36 aaataagacggatggtcaaacattgaacacggaaac 1
>RF01062;MIR812;AP008207.1/31376785-31376955 39947:Oryza sativa
Japonica Group
Length = 171
Score = 127 bits (64), Expect = 9e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AACV01017136.1/19656-19829 39947:Oryza sativa
Japonica Group
Length = 174
Score = 127 bits (64), Expect = 9e-29
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 61 gtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgt 120
|||||||||||||| ||||||||||||||||| |||||| |||||| |||||
Sbjct: 168 gtgtccaactttgactgtccgtcttatatgaaaactttttataatttatatttttattgt 109
Query: 121 tgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tgttagatgataaaacatgattaatattttatgcgtgacttgtc 65
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||| |||||||||||||||||||| ||||||||
Sbjct: 37 caaataaaacggacggtcaaacgttggaaacggaaac 1
>RF01062;MIR812;AP005181.4/139958-139787 39947:Oryza sativa Japonica
Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 156 tttgactgtccgtcttatatgaaatatttttataattcgtatttttattgttgttagatg 97
Query: 130 ataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||
Sbjct: 96 ataaaacatgattaatattttatgcgtgacttgtc 62
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||||||| |||||
Sbjct: 36 aaataagacggacggtcaaacgttggacacagaaac 1
>RF01062;MIR812;AAAA02011074.1/102896-102725 39946:Oryza sativa
Indica Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 62 tgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgtt 121
||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||
Sbjct: 165 tgtccaactttaactgtccgtcttatatgaaatttttttataattcatattttcattatt 106
Query: 122 gttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gttagatgataaaacatgattaatattttatgcgtgacttgtc 63
>RF01062;MIR812;AK100615.1/4071-4241 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct: 171 gtttccgtgtccaattttgactatctgtcttatataaattttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 111 cattgttgttagatgataaaacatgattaatattttatgcgcgacttgtc 62
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacg 214
|||||||||||||||||||||||
Sbjct: 34 caaataagacggacggtcaaacg 12
>RF01062;MIR812;AACV01002983.1/25013-24842 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 172 gtttccgtgtccaactttgactgtccgtcttatatgaattttttttataattcgcatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||| ||||||||| |||||||||||| | ||||||||||
Sbjct: 112 cattgttgttagataataaaacataattaatattttaggtgtgacttgtc 63
>RF01062;MIR812;AL606706.3/33946-33779 39947:Oryza sativa Japonica
Group
Length = 168
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||| ||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 168 gtttccgtgttcaattttgattgtccgtcttatattaaatttttttataattcgtatttt 109
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 108 tattgttgttaaatgataaaacataattaatattttatgcgtgacttgtc 59
>RF01062;MIR812;AC125784.1/17256-17084 39947:Oryza sativa Japonica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 173 gtttctgtgtccaactttgactgtccgttttatatgaaatttttttataattcgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 113 tattgttgttagatgataaaatataattaatattttatgcgtgacttgtc 64
>RF01062;MIR812;AAAA02025838.1/29287-29116 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||| ||||||||||| | ||||||| |||||| || ||||||||||||||
Sbjct: 172 gtttccatgtccaactttaactgtccgttttatataaaaaatttttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 112 cattgttgttagatgataaaacatgattagtattttatgcgtgacttgtc 63
>RF01062;MIR812;AP008210.1/33278540-33278369 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||
Sbjct: 172 gtttctgtgtccaactttgactgtccgtcttatatgaaatttttttataattcatatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||| ||||||||| |||||||||||||||||| |||||||||
Sbjct: 112 cattgttgttaaatgataaaatatgattaatattttatgcatgacttgtc 63
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
||||||||||| | |||||||| |||||||||||||
Sbjct: 37 caaataagacgaatggtcaaaccttggacacggaaa 2
>RF01062;MIR812;AACV01014829.1/1696-1867 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||| ||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 172 gtttccatgtccaactttgactgtccgtcttatatgaagtttttttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
| ||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 112 cgttgttgttatatgataaagcatgattaaaattttatgcgtgacttgtc 63
>RF01058;MIR806;AP004630.3/83094-82852 39947:Oryza sativa Japonica
Group
Length = 243
Score = 123 bits (62), Expect = 1e-27
Identities = 104/118 (88%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 45 caaaccctgggtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnata 103
|||||||||| |||||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 27 caaaccctggatttccgtg-ccaacgtttgactgtccgtcttatatgaaatttttttata 85
Query: 104 attcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 86 attagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgactt 143
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 192 caaataagacggacggtcaaacgttggacacggaaaccagagtttgtc 239
|||||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 172 caaataagacggacggtcaatcgttggacacgaaaaccagggtttgtc 219
>RF01062;MIR812;AP008207.1/28702284-28702098 39947:Oryza sativa
Japonica Group
Length = 187
Score = 121 bits (61), Expect = 6e-27
Identities = 89/101 (88%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 187 gtttccgtgtccaactttgactgtccgtctcatatgaaatttttttataattcgtatttt 128
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcg 155
| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 127 cgttgttgttagatgataaaatatgattaatattttatgcg 87
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||| |||| ||||
Sbjct: 36 aaataagacggacggtcaaacgttgggcacgaaaac 1
>RF01062;MIR812;AP008208.1/25323174-25323345 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| || ||||| |||||||||||||| | ||||||||||||||
Sbjct: 172 gtttccgtgtctaattttgactgtccgtcttatataatttttttttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cattattgttagatgataaaacatgattaatattttatgcgtgacttgt 64
>RF01062;MIR812;AACV01002189.1/17402-17236 39947:Oryza sativa
Japonica Group
Length = 167
Score = 121 bits (61), Expect = 6e-27
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 57 ttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttca 116
||||||||| |||||| | || |||||||||||||| ||||||||||||||||
Sbjct: 167 ttccgtgtctaactttaactgcccgtcttatatgaaatttttttataattcgtattttca 108
Query: 117 ttgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 107 ttgttgttagaggataaaacatgattaatattttatgcgtgactt 63
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacg 223
||||||||| |||||||||||||||| |||||
Sbjct: 35 caaataagatggacggtcaaacgttgtacacg 4
>RF01062;MIR812;AL606602.2/131959-132130 39947:Oryza sativa Japonica
Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 167 cgtgtccaactttgactgtccgtcttatataaaaattttttataattcgtattttcatta 108
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 107 ctgttagatgataaaacatgattaatattttatgcgtaacttgtc 63
>RF01062;MIR812;AAAA02032801.1/16435-16606 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||| || |||||||| ||||||||||||||||| ||||||| ||||||
Sbjct: 172 gtttccgtatctaactttgactgtccgtcttatatgaaatttttttataattcttatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 112 cattgttgttagatgataaaacatgattaatattttatacgtgatttgt 64
>RF01062;MIR812;AP005105.3/7970-7799 39947:Oryza sativa Japonica
Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| |||| ||||||||| || ||||||||||||||
Sbjct: 172 gttttcgtgtccaactttgactgtctgtcttatataaaatttttttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 112 tattgttgttagatgataaaacatgattaatattttatgcgtgatttgt 64
>RF01062;MIR812;AP008217.1/4404306-4404135 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||||||||| ||||||||||||||| | |||| ||||||||
Sbjct: 171 tttccgtgtccaactttgaccatccgtcttatatgaaatttttttacaatttgtattttc 112
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gttgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 63
>RF01062;MIR812;AAAA02016531.1/29245-29087 39946:Oryza sativa Indica
Group
Length = 159
Score = 119 bits (60), Expect = 2e-26
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 58 tccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcat 117
|||||||||||||||||||| |||||||||||||| |||||||||| ||| ||
Sbjct: 156 tccgtgtccaactttgattggccgtcttatatgaaatttttttataattcgtacttttat 97
Query: 118 tgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 96 tgttgttagatgataaaacatgattaatactttgtgcgtgactt 53
>RF01062;MIR812;AP008215.1/15621529-15621700 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattcgtattttcattattgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AAAA02003356.1/28581-28752 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 64 tccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgt 123
||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 163 tccaactttgactgtccgtcttatatgaaatttttttataattcgtatttttattattgt 104
Query: 124 tagatgataaaacatgattaatattttatgcgtgacttgt 163
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 103 tagatgataaaacatgattaatattttatgtgtgacttgt 64
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||| ||||||||
Sbjct: 36 aaataagacggacggtcaaacgttggatacggaaac 1
>RF01062;MIR812;AAAA02017418.1/23307-23138 39946:Oryza sativa Indica
Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
|||||||||| |||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 169 tttccgtgtctaactttaattgtccgtcttatatgaaatttttt-ataattcgtattttt 111
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 110 attgttgttagatgataaaacatgattaatattttatacgtgaattgtc 62
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||||| || |||||| ||||||||
Sbjct: 36 aaataagacggacggttaatcgttgggcacggaaa 2
>RF01062;MIR812;AACV01009994.1/18616-18451 39947:Oryza sativa
Japonica Group
Length = 166
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataatttgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||| ||||||||||||||||||||||||||
Sbjct: 37 caaataagacagacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AP008209.1/1236224-1236395 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 126 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatacgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
||||||||| |||| ||| ||||||||||||||||
Sbjct: 36 aaataagacagacgatcatacgttggacacggaaa 2
>RF01062;MIR812;AP008209.1/33733368-33733199 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 127 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcatgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
||||||| ||| ||||||||||||||||||||||||
Sbjct: 37 caaataaaacgcacggtcaaacgttggacacggaaa 2
>RF01062;MIR812;AP004815.3/114705-114536 39947:Oryza sativa Japonica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||| ||| ||||| ||||||||||||||||| || |||||||||||
Sbjct: 170 gtttccgtgttcaattttgactgtccgtcttatatgaattttttttattattcgtatttt 111
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 110 cattgttgttagatgataaaacatgattactattttatgtgtgactt 64
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||| ||||||||||||||| ||||| ||||
Sbjct: 36 aaataagaaggacggtcaaacgttagacacagaaa 2
>RF01062;MIR812;EF557314.1/393-562 39946:Oryza sativa Indica Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 59 ccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcatt 118
||||||| | ||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 170 ccgtgtcgatctttgattgtccgtcttatatagaaatgttttataattcgtattttcatt 111
Query: 119 gttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 110 gttgtgagatgataaaacatgattaatattttatgcgtgactt 68
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggaca 221
|||||||||||| ||||||||||||||||
Sbjct: 36 aaataagacggaaggtcaaacgttggaca 8
>RF01062;MIR812;AACV01023241.1/21629-21456 39947:Oryza sativa
Japonica Group
Length = 174
Score = 117 bits (59), Expect = 9e-26
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ataattcgtatttttattgttgttagatgataaaacatgattaatattttatgcgtgact 69
Query: 161 tgt 163
|||
Sbjct: 68 tgt 66
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||| ||||||||||||||||||| |||| ||||
Sbjct: 37 caaataaaacggacggtcaaacgttgggcacgaaaac 1
>RF01062;MIR812;AAAA02014628.1/16152-15981 39946:Oryza sativa Indica
Group
Length = 172
Score = 117 bits (59), Expect = 9e-26
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 67 aactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttag 126
||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct: 160 aactttgattgtccgtcttatataaaatttttttataattcgtattttcattgttgctag 101
Query: 127 atgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||| |||||
Sbjct: 100 atgataaaacatgattaatattttatgcgcgactt 66
>RF01062;MIR812;AP008207.1/33077508-33077680 39947:Oryza sativa
Japonica Group
Length = 173
Score = 117 bits (59), Expect = 9e-26
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||| | |||||||||||||||| |||||| ||||||
Sbjct: 173 gtttccgtgtccaacgtttaaccgtccgtcttatatgaaatttttttataattagtattt 114
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 113 tcattgttgttagatgataaaacatgattaatattttatgcgtaacttgtc 63
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||| |||||||||||||||||||
Sbjct: 140 ataagacggacggttaaacgttggacacggaaac 173
>RF01062;MIR812;CR855235.1/9692-9862 4530:Oryza sativa (rice)
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||| ||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 171 gttttcgtgttcaattttgactgtccgtcttatatgaaatttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 111 tattgttgttagatgataatacatgattaatattttatgcatgacttgtc 62
>RF01062;MIR812;AP008210.1/20128856-20129021 39947:Oryza sativa
Japonica Group
Length = 166
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| | ||||| ||||||||| |||||| ||||||
Sbjct: 166 gtttccgtgtccaactttgactatccgttttatatgaaatttttttataatttatatttt 107
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 106 tattgttgttagatgataaaacatgattaatattttatgtgtgacttgtc 57
>RF01062;MIR812;AAAA02003779.1/4494-4325 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 67 aactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttag 126
|||||||| ||| ||||||||||||| |||||||||||||||||||||| |||
Sbjct: 159 aactttgactgttcgtcttatatgaaatttttttataattcgtattttcattgttgctag 100
Query: 127 atgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||| ||||||||||||||
Sbjct: 99 atgataaaacatgattaatatttcatgcgtgacttgtc 62
>RF01062;MIR812;AAAA02023310.1/41630-41795 39946:Oryza sativa Indica
Group
Length = 166
Score = 115 bits (58), Expect = 3e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttg 162
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aattcgtatttttattgttgttagatgataaaacatgattaatattttatgcgtgacttg 65
Query: 163 tc 164
||
Sbjct: 64 tc 63
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||||| ||||||||| || |||||
Sbjct: 36 aaataagacggacggttaaacgttgggcatggaaa 2
>RF01062;MIR812;AAAA02017200.1/46356-46526 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||||| || | ||||||||||| ||||||||||||||
Sbjct: 171 gtttccgtgtctaactttgactgcctgtcttatatgatatttttttataattcgtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 111 cattgttgttagatgataaaacatgattaatatttcatgtgtgacttgtc 62
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 197 aagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||| || ||||||
Sbjct: 32 aagacggacggtcaaacgttgggcatggaaac 1
>RF01062;MIR812;AAAA02004309.1/6851-7023 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| ||||||| |||||||| |||||| |||||||
Sbjct: 173 gttttcgtgtccaactttgactgtccgttttatatgatatttttttataatttgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 113 tattgttgttagatgataaaacatgattaatattttatacgtgacttgtc 64
>RF01062;MIR812;AACV01018965.1/12897-13067 39947:Oryza sativa
Japonica Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 93/106 (87%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||||||||| |||||||||||||||| | ||||||||||| |
Sbjct: 170 tttccgtgtccaactttgactgtccgtcttatatgattttttttaa-aattcgtatttcc 112
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 111 attgttgttagatgataaaacatgattaatattttatgcgtaactt 66
>RF01062;MIR812;AACV01020168.1/4005-4178 39947:Oryza sativa Japonica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnn-ataattcgtattt 113
|||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 174 gtttccgtgtccaactttgactgtccgtcttatatgaaattttttttataattcgtattt 115
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||||||| ||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 114 tcattgttattagatgataaaacatgataaatattttatacatgacttgt 65
>RF01062;MIR812;AAAA02006505.1/7967-8136 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 67 aactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttag 126
||||||||||||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 158 aactttgattgtccgtctt-tatgaaatttttttataattcgtatttttatcgttgttag 100
Query: 127 atgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgataaaacatgattaatattttatgcgtgacttgtc 62
>RF01062;MIR812;AP008209.1/6612427-6612602 39947:Oryza sativa
Japonica Group
Length = 176
Score = 115 bits (58), Expect = 3e-25
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 168 cgtgtccaactttgactgtccgtcttatatgaaatttttttataatttgtattttcatta 109
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 108 ttgttagatgataaagcatgattaatattttatgcttgactt 67
>RF01062;MIR812;AP003794.4/118366-118195 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtga 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtga 68
>RF01062;MIR812;AACV01009804.1/392-563 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||| |||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 172 gtttccgggtccaactttgactgtccgtcttatatgaattttttttataatttggatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 112 cattgttgctagatgataaaacatgattaaaattttatgcgtgatttgtc 63
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||| ||||||||||||||
Sbjct: 37 caaataagacgaacggtcaaatattggacacggaaac 1
>RF01062;MIR812;AACV01004502.1/1038-1210 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| ||||||| |||||||| ||||||||||||||
Sbjct: 173 gtttccgtgtccaactttgactgtccgttttatatgatttttttttataattcgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||| |||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 113 tatttttgttagaggatagaacatgattaatattttatgcgtgacttgtc 64
>RF01062;MIR812;AAAA02002644.1/11064-11244 39946:Oryza sativa Indica
Group
Length = 181
Score = 113 bits (57), Expect = 1e-24
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 152 tgtccgtcttatatgaaatttttttataattcgtattttcattattgtgagatgataaaa 93
Query: 136 catgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||
Sbjct: 92 catgattaatattttatgcgtgacttgtc 64
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||| ||||||||||||| || ||||||
Sbjct: 36 aaataagacggaaggtcaaacgttgggcatggaaac 1
>RF01062;MIR812;AAAA02007753.1/15767-15936 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||| ||| ||||||| | |||||||||||||| || |||||| ||||||||
Sbjct: 169 tttccatgttcaacttttactgtccgtcttatataaaatctttttataatttgtattttc 110
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 109 attgttgttagatgataaaacatgattaatattttatacgtgacttgtc 61
>RF01062;MIR812;AC078948.11/88269-88440 4530:Oryza sativa (rice)
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ataattagtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 65
Query: 161 t 161
|
Sbjct: 64 t 64
>RF01062;MIR812;AP005158.3/66411-66583 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
>RF01062;MIR812;AP003442.2/419-588 39947:Oryza sativa Japonica Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ataattagtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 64
Query: 161 t 161
|
Sbjct: 63 t 63
>RF01062;MIR812;AAAA02017694.1/27567-27412 39946:Oryza sativa Indica
Group
Length = 156
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ataattcgtatttttattgttgttagatgataaaacatgattaatattttatgcgtgact 54
Query: 161 t 161
|
Sbjct: 53 t 53
>RF01062;MIR812;AACV01005513.1/2329-2490 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 1e-24
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||| ||||||||||| | |||||||||||| || ||||||||||||||
Sbjct: 161 tttccgtatccaactttgactatccgtcttatat-aaaattttttataattcgtattttt 103
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 102 attgttgttagatgataaaacatgattaatattttatgtgtgacttgtc 54
>RF01062;MIR812;AACV01008129.1/23508-23343 39947:Oryza sativa
Japonica Group
Length = 166
Score = 113 bits (57), Expect = 1e-24
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||||||||||| | | |||||||||||||| ||||||||||||||||||
Sbjct: 161 cgtgtccaactttaacggcccgtcttatatgaaatttttttataattcgtattttcatta 102
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 101 ttgttagatgataaaacatgattaatattttatgcgtgatttgtc 57
>RF01062;MIR812;CR855135.1/1917-2075 4530:Oryza sativa (rice)
Length = 159
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 114 ataattcgtattttcattgttgttagatgataaaacataattaatattttatgcgtgact 55
Query: 161 t 161
|
Sbjct: 54 t 54
>RF01062;MIR812;AP008217.1/24300987-24300820 39947:Oryza sativa
Japonica Group
Length = 168
Score = 113 bits (57), Expect = 1e-24
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct: 163 cgtgtccaactttgtctgtccgtcttatatgaaatttttttataattcgtatttttattg 104
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 103 tggttagatgataaaacatgattaatactttgtgcgtgacttgtc 59
>RF01062;MIR812;AACV01013885.1/21703-21868 39947:Oryza sativa
Japonica Group
Length = 166
Score = 113 bits (57), Expect = 1e-24
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 64 tccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgt 123
||||| ||||||||||||||||||||||| ||||||| |||||| |||||||
Sbjct: 157 tccaattttgattgtccgtcttatatgaaatttttttataattcacattttcgttgttgt 98
Query: 124 tagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 97 tagatgataaaacatgattaatattttatgtgtgacttgtc 57
>RF01062;MIR812;AP008211.1/19810407-19810236 39947:Oryza sativa
Japonica Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 152 tgtccgtcttatatgaaaattttttataattcgtattttcatcgttgttagatgataaaa 93
Query: 136 catgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||| |||||||
Sbjct: 92 catgattaatattttatgcgtaacttgtc 64
>RF01062;MIR812;AC137751.2/121184-121016 39947:Oryza sativa Japonica
Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ataattagtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 64
Query: 161 t 161
|
Sbjct: 63 t 63
>RF01062;MIR812;AAAA02005357.1/9921-9750 39946:Oryza sativa Indica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||| |||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 167 cgtgttcaactttgattgtctatcttatatgaattttttttataattcatattttcatta 108
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 107 ttgttagataataaaacatgattaatattttatgcgtgacttgtc 63
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||| |||||||||||||||||||||
Sbjct: 37 caaataagacgaacgatcaaacgttggacacggaaac 1
>RF01062;MIR812;AAAA02020382.1/15042-15213 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126 ataattcctattttcattgttgttagatgataaaacatgattattattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
||||||||||||||||||||| ||| ||||||||||
Sbjct: 37 caaataagacggacggtcaaatgttagacacggaaa 2
>RF01062;MIR812;AAAA02003725.1/40989-40818 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||| | | |||||||||||| || |||||||| |||||
Sbjct: 172 gtttccgtgtccaactttaactatccgtcttatataaaaattttttataattcgaatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtga 158
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 112 cattgttgttagaggataaaacatgattaatattttatgcgtga 69
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||| |||||||||||||||| ||||| ||||
Sbjct: 37 caaataagatggacggtcaaacgttgtacacgaaaac 1
>RF01062;MIR812;AAAA02018613.1/1001-834 39946:Oryza sativa Indica
Group
Length = 168
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 126 ataattcgtattttcattgttgttacataataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||| |||||||||
Sbjct: 37 caaataagacggacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AAAA02015015.1/195-368 39946:Oryza sativa Indica
Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 127 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttgga 219
|||||||||||| ||||||||||||||
Sbjct: 36 aaataagacggatggtcaaacgttgga 10
>RF01062;MIR812;AL731885.4/38294-38466 4530:Oryza sativa (rice)
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 127 ataattcatattttcattgttgttagatgataaaatatgattaatattttatgcgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
>RF01062;MIR812;AAAA02030603.1/121451-121279 39946:Oryza sativa
Indica Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 126 ataattcgtattttcattgttgttagatgataaaacgtgattaatattttatgcgtgtct 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AC210491.1/137316-137488 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 127 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcatgatt 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
|||||||||| |||||||||||||||||||||||||
Sbjct: 37 caaataagacagacggtcaaacgttggacacggaaa 2
>RF01062;MIR812;AACV01013549.1/27226-27395 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 124 ataattcgtattttcattattgttagatgataaaacgtgattaatattttatgcgtgact 65
Query: 161 tgtc 164
||||
Sbjct: 64 tgtc 61
>RF01062;MIR812;AP006554.2/95701-95531 39947:Oryza sativa Japonica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 94/108 (87%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||| | ||||||||||||||||| |||||| ||||||
Sbjct: 171 gtttccgtgtccaacatttaactgtccgtcttatatgaaatttttttataattagtattt 112
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 111 tcattgttgttagatgataaaacgtgattaatactttatgcgtgactt 64
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggaca 221
||||||| ||||||||||||||||||||||
Sbjct: 37 caaataaaacggacggtcaaacgttggaca 8
>RF01062;MIR812;AAAA02011111.1/134-306 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
|||| ||||||||||||||| ||||||||||||| || ||||||||||||||
Sbjct: 172 tttctgtgtccaactttgatggtccgtcttatataaattttttttataattcgtattttt 113
Query: 116 attgttgttagatgat--aaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 112 attgttgttagatgatttaaaacatgattaatattttatacgtgacttgtc 62
>RF01062;MIR812;AC213129.1/84744-84913 4538:Oryza glaberrima
(African rice)
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ataattagtattttcattattgttagatgataaaacatgattaatattttatgcgtgact 65
Query: 161 tgtc 164
||||
Sbjct: 64 tgtc 61
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||| |||||||||||||||||| |||||||
Sbjct: 36 aaataagatggacggtcaaacgttggatacggaaa 2
>RF01062;MIR812;AAAA02000425.1/85094-84923 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 125 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
>RF01062;MIR812;AP003768.3/96192-96365 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 127 ataattcgtattttcattgttgttaaatgataaaacatgattaatattttatacgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 195 ataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||| ||| ||||||||||||||
Sbjct: 34 ataagacggacggttaaatgttggacacggaaa 2
>RF01062;MIR812;AAAA02007529.1/7922-7757 39946:Oryza sativa Indica
Group
Length = 166
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattagtattttcattgttattagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AAAA02015849.1/5744-5575 39946:Oryza sativa Indica
Group
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattcgtattttcattagtgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||| ||||||||||||||| |||||||||
Sbjct: 36 aaataagacgaacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AAAA02021140.1/2062-2233 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||||||||||||||||||||| ||| || |||||||||||||| |||||||
Sbjct: 157 tttgattgtccgtcttatatgaaatttttttatagttagtattttcattgtttttagatg 98
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||
Sbjct: 97 ataaaacatgattaatattttatgcgtgactt 66
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||| |||| ||||||||||||| ||||||||
Sbjct: 37 caaataagatggacagtcaaacgttggatacggaaac 1
>RF01062;MIR812;AACV01018464.1/1129-1300 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AP008208.1/21732167-21731995 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||||||||||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct: 157 tttgattgtccgttttatatgaaatttttttataattagtattttcattgttgttagatg 98
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||| |||||||||||||||
Sbjct: 97 ataaaacatgattaatgttttatgcgtgactt 66
>RF01062;MIR812;AC210447.1/75470-75299 4538:Oryza glaberrima
(African rice)
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||| ||||||| |||||||||||||| ||||
Sbjct: 37 caaataagatggacggttaaacgttggacacgaaaac 1
>RF01062;MIR812;AAAA02034277.1/2944-2773 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 157 tttgactgtccgtcttatatgaaatttttttataattagtattttcattgttgttagatg 98
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||| ||||||
Sbjct: 97 ataaaacatgattaatattttatgcatgactt 66
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacgga 225
|||||||||||||||||||||||||||| |||||
Sbjct: 37 caaataagacggacggtcaaacgttggatacgga 4
>RF01062;MIR812;AAAA02011459.1/19575-19404 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||||| |||| | |||||||||| ||||||||||||||
Sbjct: 172 gtttccgtgtccaactttgactgtctgccttatatgaattttgtttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
| ||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 112 cgttgttgttagacgataaaacatgatgaatattttatgtgtgactt 66
>RF01062;MIR812;AAAA02022207.1/2101-1929 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 54 ggtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||||| ||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 173 ggtttctgtgtctaactttgattgtccgtcttatataaaatttttttataattcgtattt 114
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||| |||||||||||| ||| |||||||||||||| ||| ||||||
Sbjct: 113 tcattgttattagatgataaagcataattaatattttatgtgtggcttgtc 63
>RF01062;MIR812;AY459337.1/40919-41091 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
|||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 157 tttgattgtccgtcttatataaattttttttataattagtattttcattgttgttagatg 98
Query: 130 ataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||| ||||||||| |||||||
Sbjct: 97 ataaaacatgattaatactttatgcgtaacttgtc 63
>RF01062;MIR812;AACV01012040.1/494-660 39947:Oryza sativa Japonica
Group
Length = 167
Score = 109 bits (55), Expect = 2e-23
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 63 gtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttg 122
|||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 159 gtccaattttgactgtccgtcttatatgaaatttttttataattcatattttcattgttg 100
Query: 123 ttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||| ||||||||||||||| ||||||
Sbjct: 99 ttagatgataaaacattattaatattttatgcatgactt 61
>RF01062;MIR812;AAAA02007387.1/34016-33845 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnn-ataattcgtattt 113
||||||| |||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 172 gtttccgcgtccaactttaattgtccgtcttatatgaaattttttttataattcgtattt 113
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
| |||||||||||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 112 ttattgttgttagatgataaaatatgattaatgttttatacgtgacttgtc 62
>RF01062;MIR812;AACV01016097.1/11993-12168 39947:Oryza sativa
Japonica Group
Length = 176
Score = 109 bits (55), Expect = 2e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 130 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 71
Query: 161 tgt 163
|||
Sbjct: 70 tgt 68
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
||||||||||||| |||||||||||||||||||||
Sbjct: 36 aaataagacggacagtcaaacgttggacacggaaa 2
>RF01062;MIR812;AACV01011047.1/9417-9574 39947:Oryza sativa Japonica
Group
Length = 158
Score = 109 bits (55), Expect = 2e-23
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||| ||||||||| |||||||||||||| || |||||| ||||||
Sbjct: 158 gtttccgtgtacaactttgactgtccgtcttatataaaatttttttataatttatatttt 99
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 98 cattgttgttagatgataaaacatgattaacattttatgtgtgactt 52
>RF01062;MIR812;ABRL01001213.1/35888-36058 65489:Oryza barthii
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||| ||| ||||||||||||||||| |||||||||| |||
Sbjct: 171 gtttccgtgtccaactctgactgtccgtcttatatgaaatttttttataattcgtaattt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||| || || ||||||||||| ||||||||||
Sbjct: 111 tattgttgttagatgataaaatataatgaatattttatgtgtgacttgtc 62
>RF01062;MIR812;ABRL01000157.1/4525-4357 65489:Oryza barthii
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||| ||||||||||||||||||| ||||||| ||| ||
Sbjct: 169 gtttccgtgtctaactttaattgtccgtcttatatgaaatttttttataattcatatatt 110
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||| ||||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 109 catttttgttagatgataaaacataattaatattttatacgagacttgtc 60
>RF01062;MIR812;AAAA02010831.1/27324-27153 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 8e-23
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||| | |||||||||||||| || |||||||| |||||
Sbjct: 172 gtttccgtgtccaactttaactgtccgtcttatataaattttttttataattcgcatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||| |||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 112 tattattgttagatgataaaatatgattaatattttatgcatgacttgtc 63
>RF01062;MIR812;AAAA02030065.1/17-185 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 63
>RF01062;MIR812;AACV01005662.1/49714-49886 39947:Oryza sativa
Japonica Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 151 tgtccgtcttatatgaattttttttataattagtattttcattgttgttagatgataaaa 92
Query: 136 catgattaatattttatgcgtgactt 161
|||||||||||||||||| |||||||
Sbjct: 91 catgattaatattttatgagtgactt 66
>RF01062;MIR812;AAAA02011064.1/31317-31486 39946:Oryza sativa Indica
Group
Length = 170
Score = 107 bits (54), Expect = 8e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtga 158
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ataattcgtatttttattgttgttagatgataaaacatgattaatattttatgcgtga 67
>RF01062;MIR812;AP008215.1/17541195-17541028 39947:Oryza sativa
Japonica Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 97/111 (87%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||||||||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 168 gtttccgtgtccaatatttgactgtccgtcttatatgaaatttttt-ataattagtattt 110
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 109 tcattgttgttagatgataaaacataattaatattttatgcgtgatttgtc 59
>RF01062;MIR812;AAAA02020747.1/30289-30456 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 taatttgtatttttattgttgttagatgataaaacatgattaatattttatgcgtgactt 67
Query: 162 gt 163
||
Sbjct: 66 gt 65
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggaca 221
|||||||||||||||||||| ||||||||
Sbjct: 36 aaataagacggacggtcaaatgttggaca 8
>RF01062;MIR812;AP005178.3/47560-47390 39947:Oryza sativa Japonica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttg 162
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 124 aattcgtattttcattgttgttagatgataaaacattattaatattttatgcgtgatttg 65
Query: 163 tc 164
||
Sbjct: 64 tc 63
>RF01062;MIR812;AAAA02007472.1/19258-19088 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 93/107 (86%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| ||| |||||||||||| ||| ||||||||||
Sbjct: 171 gttttcgtgtccaactttgactgtttgtcttatatgaaatttttt-atagttcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tattgttgttagatgataaaacatgattaatattttatgcgtgactt 66
>RF01062;MIR812;AP008210.1/32704455-32704304 39947:Oryza sativa
Japonica Group
Length = 152
Score = 107 bits (54), Expect = 8e-23
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 67 aactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttag 126
|||||||| |||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 148 aactttgactgtccgtcttatataaaatttttttataattcgtatttttattgttgttag 89
Query: 127 atgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||| ||||||| |||||||||||
Sbjct: 88 atgataaaacatgattaacattttatacgtgacttgtc 51
>RF01062;MIR812;AAAA02007779.1/5073-5244 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 172 gtttgcgtgtccaactttgactgcccgtcttatataaattttttttataattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||| ||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 112 tattggtgtcagatgataaaacatgattaatactttatgcgtgacttgt 64
>RF01062;MIR812;AAAA02026239.1/39734-39565 39946:Oryza sativa Indica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 91/105 (86%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||||||||| |||| ||||| ||||| ||||||||||| |||||| ||||||
Sbjct: 170 gtttccgtgttcaacgtttgactgtccatcttatatgaaatttttttataattagtattt 111
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtga 158
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 110 tcattgttgttagatgataaaacatgattaatactttatgcgtga 66
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacgg 224
|||||||||||| |||||||| ||||||||||
Sbjct: 34 aaataagacggatggtcaaacattggacacgg 3
>RF01062;MIR812;AP008218.1/25877070-25876901 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 94/109 (86%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 57 ttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||| ||||| |||||||||||||| || |||||| ||||||||
Sbjct: 168 ttccgtgtccaacgtttgactgtccgtcttatataaaatttttttataattggtattttc 109
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 108 attgttgcaagatgataaaacatgattaatactttatgcgtgacttgtc 60
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacgg 224
||||||||| |||||||||||||||||||||||
Sbjct: 35 caaataagatggacggtcaaacgttggacacgg 3
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaa 226
||||||||||| ||||||||||||||||||||
Sbjct: 137 ataagacggacagtcaaacgttggacacggaa 168
>RF01062;MIR812;AACV01006689.1/7685-7855 39947:Oryza sativa Japonica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ataattagtactttcattgttgttagatgataaaacatgattaatattttatgcgtgact 68
Query: 161 t 161
|
Sbjct: 67 t 67
>RF01062;MIR812;AAAA02035301.1/26300-26471 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| |||| |||| ||||||| |||||| ||||||
Sbjct: 172 gttttcgtgtccaactttgactgtctgtctcatatgaaaattttttataatttatatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gattattgttagatgataaaacatgattaatattttatgcgtgacttgt 64
>RF01062;MIR812;AAAA02027656.1/20954-21126 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttccgtgtctaactttgactgtccgtcttatatgaaatttttttataattcgtatttt 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
|||||| |||||||||||||||| || |||||||||||| ||| ||||
Sbjct: 113 tattgttattagatgataaaacataataaatattttatgcatgatttgt 65
>RF01062;MIR812;ABRL01000574.1/573-745 65489:Oryza barthii
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 95/110 (86%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||| |||||||||||| | ||||||||||||||||| |||||| |||||||
Sbjct: 173 gtttctgtgtccaactttaactgtccgtcttatatgaattttttt-ataatttgtatttt 115
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 114 cattgttgttagatgataaaacataattaatactttgtgcgtgacttgtc 65
>RF01062;MIR812;AAAA02006463.1/33850-33680 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117 ataattagtattttcattgttgttagatgataaaatatgattaatattttatgcgtgact 58
Query: 161 t 161
|
Sbjct: 57 t 57
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||| |||||||||||||||||||||||||||
Sbjct: 37 caaataagatggacggtcaaacgttggacacggaaac 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| |||||||| |||||||||||||
Sbjct: 138 ataagacggacagtcaaacgctggacacggaaac 171
>RF01062;MIR812;AAAA02006190.1/10867-10698 39946:Oryza sativa Indica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 96/110 (87%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||| ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 169 tttccgtgtccaacgtttgactgtccgttttatatgaaaattgtt-ataattagtatttt 111
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 110 tattgttgttagatgataaaacatgattaatattttatgtgtgacttgtc 61
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaa 227
|||| |||||| |||||||||||||||||||||
Sbjct: 137 ataaaacggacagtcaaacgttggacacggaaa 169
>RF01062;MIR812;AP008218.1/5276207-5276035 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
|||||||||| |||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 172 tttccgtgtctaactttgactgtctatcttatatgaaatttttttataattcgtattttc 113
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||| || || |||||||||||||||||||||||||| |||||||||||
Sbjct: 112 attgatgctaaatgataaaacatgattaatattttatacgtgacttgtc 64
>RF01062;MIR812;ABRL01000628.1/965-795 65489:Oryza barthii
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
|||||| |||||||| ||| |||||||||| || |||||||||||||| ||||
Sbjct: 166 cgtgtctaactttgactgttcgtcttatataaaatttttttataattcgtatttttattg 107
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 106 ttattagatgataaaacatgattaatattttatgcgtggcttgtc 62
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
||||||||||||| |||||||||||||||||||||
Sbjct: 36 aaataagacggacagtcaaacgttggacacggaaa 2
>RF01062;MIR812;AAAA02000606.1/14373-14200 39946:Oryza sativa Indica
Group
Length = 174
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ataattagtatttttattgttgttagatgataaaacatgattaatattttatgcgtgact 68
Query: 161 t 161
|
Sbjct: 67 t 67
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||| ||||||||||||| |||||||| ||||||
Sbjct: 36 aaataaaacggacggtcaaatgttggacatggaaac 1
>RF01062;MIR812;AACV01015225.1/44529-44700 39947:Oryza sativa
Japonica Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaatatgattaatattttatgcgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||| |||||||||||||||||||| | ||||||
Sbjct: 36 aaataaaacggacggtcaaacgttggatatggaaac 1
>RF01062;MIR812;AC069158.6/136626-136465 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 119 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 60
Query: 161 t 161
|
Sbjct: 59 t 59
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AP004620.3/119304-119132 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 159 tttgactgtccgtcttatatgaattatttttataattagtatttttattgttgttagatg 100
Query: 130 ataaaacatgattaatattttatgcgtga 158
|||||||||||||||||||||||||||||
Sbjct: 99 ataaaacatgattaatattttatgcgtga 71
>RF01062;MIR812;AACV01011144.1/32835-32664 39947:Oryza sativa
Japonica Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119 gtattttcattgttgttagatgataaaacatgattaatactttatgcgtgacttgtc 63
>RF01062;MIR812;AACV01005029.1/2849-2681 39947:Oryza sativa Japonica
Group
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 124 ataattagtattttcattgttgttagatgataaaacatgattaatattttatgcatgact 65
Query: 161 t 161
|
Sbjct: 64 t 64
>RF01062;MIR812;AP008210.1/29710457-29710285 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaacatgattaatattttatacgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacg 223
|||||||||| ||||||||||||||||||||
Sbjct: 36 aaataagacgaacggtcaaacgttggacacg 6
>RF01062;MIR812;AP003569.3/83385-83559 39947:Oryza sativa Japonica
Group
Length = 175
Score = 105 bits (53), Expect = 3e-22
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 150 tgtccgtcttatatgaaatttttttataattagtattttcattgttgttagatgataaaa 91
Query: 136 catgattaatattttatgcgtgacttgtc 164
||||||||||| ||||||| |||||||||
Sbjct: 90 catgattaatactttatgcatgacttgtc 62
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||| ||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttgaacacggaaac 1
>RF01062;MIR812;AP008213.1/25129604-25129774 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 125 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgact 66
Query: 161 t 161
|
Sbjct: 65 t 65
>RF01062;MIR812;ABRL01001185.1/1878-2045 65489:Oryza barthii
Length = 168
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||
Sbjct: 124 ataattcgtattttcattgttgttagatgataaaacatgattaataatttatgtgttact 65
Query: 161 tgtc 164
||||
Sbjct: 64 tgtc 61
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||| ||| |||||
Sbjct: 36 aaataagacggacggtcaaacgttgggcacagaaac 1
>RF01062;MIR812;AAAA02006832.1/44030-44202 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||||||| ||||||||||||| |||||| |||||||||||||||||| |||
Sbjct: 158 tttgattgtgcgtcttatatgaaaattttttataattagtattttcattgttgttaaatg 99
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||| ||||||||||||||
Sbjct: 98 ataaaacatgattaatactttatgcgtgactt 67
>RF01062;MIR812;ABRL01000294.1/24494-24321 65489:Oryza barthii
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 126 ataattagtattttcattgttgttagatgatagaacatgattaatattttatacgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 194 aataagacggacggtcaaacgttggacacggaaa 227
||||||||||||||||||| ||||||||||||||
Sbjct: 35 aataagacggacggtcaaatgttggacacggaaa 2
>RF01062;MIR812;AP008207.1/24461745-24461913 39947:Oryza sativa
Japonica Group
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 123 ataatttgtatttttattgttgttagatgacaaaacatgattaatattttatgcgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
>RF01062;MIR812;AP005575.3/42422-42604 39947:Oryza sativa Japonica
Group
Length = 183
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 126 ataattcgtatttttattgttgttagatgataaaacataattaatattttatgcgtaact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||| |||| |||||||||
Sbjct: 36 aaataagacggacggtcaaacattgggcacggaaac 1
>RF01062;MIR812;AL663017.3/108295-108465 39947:Oryza sativa Japonica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 125 ataattcatattttcatttttgttagatgataaaacatgattaatattttatgtgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||| |||||||||
Sbjct: 36 aaataagacggacggtcaaacgttgatcacggaaac 1
>RF01062;MIR812;AL606651.3/90217-90044 39947:Oryza sativa Japonica
Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgt 156
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 128 ataattcgtattttcattattgttagatgataaaacatgattaatattttatgcgt 73
>RF01062;MIR812;AP008216.1/21152191-21152361 39947:Oryza sativa
Japonica Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tatttttattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 63
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaa 226
|||||||||||||||| |||||||| ||||||||
Sbjct: 36 aaataagacggacggttaaacgttgaacacggaa 3
>RF01062;MIR812;AP004080.3/114837-115009 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 118 tattttcattgttgttagatgataaaacatgattaatactttatgcgtgacttgtc 63
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggaca 221
|||||||||||||||||||||| ||||
Sbjct: 140 ataagacggacggtcaaacgtttgaca 166
>RF01062;MIR812;AC093018.4/120107-120279 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtattttcattattgttagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggaca 221
|||||||||||| ||||||||||||||||
Sbjct: 36 aaataagacggatggtcaaacgttggaca 8
>RF01062;MIR812;AAAA02006723.1/6073-5900 39946:Oryza sativa Indica
Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||||| |||||||| ||||| |||||||||||||| || |||||| ||||||
Sbjct: 174 gtttccatgtccaacgtttgactgtccgtcttatataaattttttttataattagtattt 115
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 114 ttattgttgttagatgataaaacatgattaatgttttatgcgtgactt 67
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||| ||||||
Sbjct: 141 ataagacggacagtcaaacgttggacatggaaac 174
>RF01062;MIR812;AP005066.2/156640-156469 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 126 ataattagtattttcattgttgttagataataaaacatgattaatatattatgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||| ||| ||| |||||||||||||||||||
Sbjct: 36 aaataagatggatggttaaacgttggacacggaaac 1
>RF01062;MIR812;AAAA02006502.1/2129-2297 39946:Oryza sativa Indica
Group
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123 ataattagtactttcattgttgttagatgataaaacatgattaatactttatgcgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 194 aataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||||||| ||||
Sbjct: 35 aataagacggacggtcaaacgttggacacgtaaac 1
>RF01062;MIR812;AAAA02011393.1/44665-44505 39946:Oryza sativa Indica
Group
Length = 161
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 115 ataattagtatttttattgttgttagatgataaaacatgattaatattttatgcgtggct 56
Query: 161 tgtc 164
||||
Sbjct: 55 tgtc 52
Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacac 222
|||||||||||||||||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttggacac 7
>RF01062;MIR812;AP005192.3/73866-73703 39947:Oryza sativa Japonica
Group
Length = 164
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 118 ataattcgtatttttattattgttaaatgataaaacatgattaatattttatgcgtgact 59
Query: 161 tgtc 164
||||
Sbjct: 58 tgtc 55
>RF01062;MIR812;AACV01023313.1/14666-14503 39947:Oryza sativa
Japonica Group
Length = 164
Score = 103 bits (52), Expect = 1e-21
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 66
>RF01062;MIR812;AAAA02004880.1/722-543 39946:Oryza sativa Indica
Group
Length = 180
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 134 ataattagtattttcattgttgttagatgataacacatgattaatactttatgcgtgact 75
Query: 161 tgtc 164
||||
Sbjct: 74 tgtc 71
>RF01062;MIR812;AAAA02010236.1/1499-1669 39946:Oryza sativa Indica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 125 ataattagtattttcattgttgttagatgataaaacatgattaatactttatacgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| |||||||||||||||| |||||
Sbjct: 138 ataagacggacagtcaaacgttggacactgaaac 171
>RF01062;MIR812;AP004096.3/87024-86851 39947:Oryza sativa Japonica
Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||| | |||| |||||||||||| |||||| ||||||
Sbjct: 174 gtttccgtgtccaacgtttaactgtcagtcttatatgaaatttttttataattagtattt 115
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 114 tcattgttgttagatgataaaacataattaatactttatgcgtgactt 67
>RF01062;MIR812;AACV01020356.1/4454-4301 39947:Oryza sativa Japonica
Group
Length = 154
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 taattagtattttcattattgttagatgataaaacatgattaatattttatgcgtgactt 66
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||| ||| |||||||| ||||||
Sbjct: 36 aaataagacggacggtaaaatgttggacatggaaac 1
>RF01062;MIR812;AACV01011508.1/1137-1308 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 126 ataattagtattttcattgttgttagatgataaaacatgattaatactttatgcatgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AP006169.3/145377-145206 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||
Sbjct: 126 ataattcgtattttcattattgttagatgataaaacatgattaatattttattcatgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AACV01010788.1/18077-17904 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 127 ataattagtattttcattgttgatagatgataaaacatgattaatactttatgcgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||| |||||||||||
Sbjct: 36 aaataagacggacggtcaaacgttagacacggaaac 1
>RF01062;MIR812;AP008215.1/20982507-20982338 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 125 ataattcgtatttttattgttgttagatgattaaacatgattaatattttatacgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
||||||| ||||||||||||||||||| ||||||||
Sbjct: 37 caaataatacggacggtcaaacgttgggcacggaaa 2
>RF01062;MIR812;AACV01012650.1/4287-4115 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttaga-tgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 125 aattcgtattttcattgttgttagaatgataaaacatgattaaaattttatgcgtgactt 66
Query: 162 gtc 164
|||
Sbjct: 65 gtc 63
>RF01062;MIR812;AACV01021924.1/376-205 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 124 aattcgtattttcattattgttagatgataaaacataattaatattttatgcgtgactt 66
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||| |||||||||||||||||||||| |||||
Sbjct: 36 aaataagtcggacggtcaaacgttggacacagaaac 1
>RF01062;MIR812;AAAA02025804.1/30970-30800 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 86/99 (86%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 170 tttccgtgtccaattttgactgtccgtcttatatgaaatttttttataattcgtattttt 111
Query: 116 attgttgttagatgataaaacatgattaatattttatgc 154
|||||||||||||||||||| ||| ||||||||||||||
Sbjct: 110 attgttgttagatgataaaatatg-ttaatattttatgc 73
>RF01062;MIR812;AACV01005274.1/4520-4691 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||| ||||||||||| ||||||||||||||||| | |||||||| ||
Sbjct: 172 gttttcgtatccaactttgactgtccgtcttatatgaaattttttta-aattcgtacttg 114
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cgttgttgttagatgataaaacatgattaatattttatgcgtgactt 67
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacg 223
||||||| ||||| ||||||||||||||||||
Sbjct: 37 caaataaaacggatggtcaaacgttggacacg 6
>RF01062;MIR812;AP005558.3/35527-35699 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtattttaattgttgttagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 tgt 163
|||
Sbjct: 66 tgt 64
Score = 67.9 bits (34), Expect = 7e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaa 226
||||||||||||||||||||||||||||||||||
Sbjct: 36 aaataagacggacggtcaaacgttggacacggaa 3
>RF01062;MIR812;AP004118.4/14932-14762 39947:Oryza sativa Japonica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 157 tttgactgtccgtcttatatgaaatttttttataattagtattttcattgttgtcagatg 98
Query: 130 ataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||||||| | |||||||||||||||
Sbjct: 97 ataaaacatgattaatactctatgcgtgacttgtc 63
>RF01062;MIR812;AAAA02004149.1/31942-31772 39946:Oryza sativa Indica
Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 124 ataattcgtatttttattgttgttacatgataaaacataattaatattttatgcgtgact 65
Query: 161 tgt 163
|||
Sbjct: 64 tgt 62
>RF01062;MIR812;AC135924.2/59519-59692 39947:Oryza sativa Japonica
Group
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 127 ataattcgtatttttattgttgttagatgataaaacatgattaatactttgtgcgtgact 68
Query: 161 tgt 163
|||
Sbjct: 67 tgt 65
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||| |||||||||
Sbjct: 37 caaataagacggacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AACV01001387.1/17780-17608 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 173 gtttccgtgtccaacgtttgactgtccgtcttatatgaaatttttt-ataattagtattt 115
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
| ||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 114 ttattattgttagatgataaaacatgattaataatttatgcgtgactt 67
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||||||||||
Sbjct: 140 ataagacggacagtcaaacgttggacacggaaac 173
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggac 220
|||||||||||||||||||||| ||||||
Sbjct: 37 caaataagacggacggtcaaacattggac 9
>RF01062;MIR812;AACV01003858.1/16873-16701 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 67 aactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttag 126
|||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 160 aactttgactgtccgtcttataagaaatttttttataattcatattttcattgttgttag 101
Query: 127 atgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||||| ||||||||| ||||||
Sbjct: 100 atgataaaacatgattaaaattttatgcatgactt 66
>RF01062;MIR812;AC098598.2/58624-58455 39947:Oryza sativa Japonica
Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 96/113 (84%), Gaps = 3/113 (2%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||| |||| || ||| | ||||||||||||||||| ||||||| ||||||
Sbjct: 170 gtttccatgtcaaattttaactgtccgtcttatatgaaattttattataattcatatttt 111
Query: 115 cattgttgtt---agatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cattgttgttggtagatgataaaacatgattaatattttatgcgtgacttgtc 58
>RF01062;MIR812;AP002486.1/119418-119247 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 93/107 (86%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnn-ataattcgtattt 113
|||||||||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 171 tttccgtgtccaacgtttgactgtccgtcttatatgaaattttttttataattagtattt 112
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 111 tcattgttgttaaatgataaaacatgattaatactttatgcgtgact 65
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaa 227
||||||||||| |||||||||||||||||||||
Sbjct: 139 ataagacggacagtcaaacgttggacacggaaa 171
>RF01062;MIR812;AAAA02017051.1/13343-13514 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||| | |||| |||||||||||| ||||||| ||||||
Sbjct: 172 gttttcgtgtccaactttaactgtctgtcttatatgaattttttttataattcatatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttat 152
|||||||||||||||||||||||||||||||||||||
Sbjct: 112 tattgttgttagatgataaaacatgattaatattttat 75
>RF01062;MIR812;AC078829.10/782-954 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 111 ttttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 115 ttttcattgttgttagatgataaaacatgattaatactttatgcgtgacttgtc 62
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||| | |||||||||||||||||||||
Sbjct: 37 caaataagacggatgttcaaacgttggacacggaaac 1
>RF01062;MIR812;AACV01011133.1/24244-24412 39947:Oryza sativa
Japonica Group
Length = 169
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||||||| | |||| |||||||||||| |||||| ||||||
Sbjct: 169 gtttccgtgtccaactttaactgtctgtcttatatgaaatttttttataatttatatttt 110
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||||||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 109 tattgttgttagataataaagcatgattaatattttatgtgtgacttgtc 60
>RF01062;MIR812;AACV01025587.1/2362-2533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 117 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtaactt 64
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttgga 219
||||||||||||||||||||||||||||
Sbjct: 35 caaataagacggacggtcaaacgttgga 8
>RF01062;MIR812;AAAA02027004.1/10445-10616 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 149 tgtccgtcttatatgaaaattttttataattagtattttcattgttgttagatgataaaa 90
Query: 136 catgattaatattttatgcgtgactt 161
|||||||||| ||||||||||||||
Sbjct: 89 catgattaattctttatgcgtgactt 64
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacac 222
|||||||||| || |||||||||||||||||
Sbjct: 37 caaataagacagatggtcaaacgttggacac 7
>RF01062;MIR812;AAAA02007024.1/994-823 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| | ||||||||||||||| |||||| ||||||
Sbjct: 172 gttttcgtgtccaactttgactatccgtcttatatgaattttgtttataatttatatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 112 cattattaatagatgataaaacatgattaatattttatacgtgacttgtc 63
>RF01062;MIR812;AACV01021917.1/13363-13191 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtga 158
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 ataattagtattttcattgttgttagatgataaaacatgattaataatttatgcgtga 70
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||| |||||||||||||||||||||
Sbjct: 37 caaataagacggacagtcaaacgttggacacggaaa 2
>RF01062;MIR812;AACV01005789.1/36180-36008 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttg 162
|||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 125 aattcgaattttcattgttgttagatgataaaacatgactaatattttatgtgtgacttg 66
Query: 163 tc 164
||
Sbjct: 65 tc 64
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||| |||||||||||||||||| ||||||||||
Sbjct: 37 caaataaaacggacggtcaaacgttgaacacggaaac 1
>RF01062;MIR812;AACV01014514.1/5145-4976 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 92/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||| ||||||||||||||| ||||||| ||||||||| | ||||||||||||
Sbjct: 170 gtttgcgtgtccaactttgactgtccgttttatatgaaattttt--aaaattcgtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 112 tattattgttagatgataaaatatgattaatattttatgcgtgactt 66
>RF01062;MIR812;AACV01004674.1/31333-31501 39947:Oryza sativa
Japonica Group
Length = 169
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtga 158
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 122 ataattagtattttcattgttgttagatgataaaacatgattaataatttatgcgtga 65
>RF01062;MIR812;ABRL01000748.1/10750-10922 65489:Oryza barthii
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtatttccattgttgttagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 tg 162
||
Sbjct: 66 tg 65
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||| ||||||||||| ||||||||||
Sbjct: 37 caaataagacggacagtcaaacgttgaacacggaaac 1
>RF01062;MIR812;AC210486.3/67976-67803 4538:Oryza glaberrima
(African rice)
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatatttt 150
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ataattcgtattttcattgttgttagatgataaaacatgattaatatttt 78
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||| |||||| |||||||||||| |||||||||
Sbjct: 37 caaataaaacggacagtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AP008217.1/16094720-16094544 39947:Oryza sativa
Japonica Group
Length = 177
Score = 99.6 bits (50), Expect = 2e-20
Identities = 91/106 (85%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||| |||||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 177 gttttcgtgtccaacgtttgactgtccgtcttatatgaaatttttttataattagtattt 118
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgac 159
||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 117 tcattattgttagatgataaaacataattaatactttatgcgtgac 72
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||||| ||||
Sbjct: 144 ataagacggacagtcaaacgttggacacgaaaac 177
>RF01062;MIR812;AP006756.2/41932-41763 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 170 gtttccgtgtccaacgtttgactgtccgtcttatatgaaatttttttataatcaatattt 111
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
| ||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 110 ttattgttgttagatgataaaacataattaatactttatgcgtgacttgt 61
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||||||||||
Sbjct: 137 ataagacggacagtcaaacgttggacacggaaac 170
>RF01062;MIR812;AAAA02021459.1/7456-7288 39946:Oryza sativa Indica
Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcg 155
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122 aattcgtattttcattgttgttagatgataaaacattattaatattttatgcg 70
>RF01062;MIR812;AAAA02012237.1/9154-8991 39946:Oryza sativa Indica
Group
Length = 164
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 ataattagtatttttattgttgttagatgataaaacatgattaatactttatgcgtgact 62
Query: 161 t 161
|
Sbjct: 61 t 61
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 198 agacggacggtcaaacgttggacacggaaac 228
|||||||| ||||||||||||||||||||||
Sbjct: 134 agacggacagtcaaacgttggacacggaaac 164
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 203 gacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||
Sbjct: 26 gacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;CR855147.1/11186-11358 4530:Oryza sativa (rice)
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 64 tccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgt 123
||||||||||| |||||||||||||| || |||||| |||||||||| ||||
Sbjct: 164 tccaactttgactgtccgtcttatataaatttttttgataatttatattttcattattgt 105
Query: 124 tagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||||||||||||||||| |||||||
Sbjct: 104 tagatgataaaacatgattaatattttatacgtgact 68
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||| |||||||||||||||||||||||||| ||||
Sbjct: 37 caaatgagacggacggtcaaacgttggacacgaaaac 1
>RF01062;MIR812;AAAA02008141.1/7949-8115 39946:Oryza sativa Indica
Group
Length = 167
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 125 ataattcgtattttcgttattgttagatgataaaatatgattaatattttatgcgtgact 66
Query: 161 t 161
|
Sbjct: 65 t 65
>RF01062;MIR812;ABRL01000024.1/11681-11836 65489:Oryza barthii
Length = 156
Score = 97.6 bits (49), Expect = 8e-20
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||||||| ||||| |||||||||||||| || |||||| | |||||||||
Sbjct: 151 cgtgtccaattttgagtgtccgtcttatataaattttttttataattagcattttcatta 92
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 91 ttgttagatgataaaacatgattaatgttttatgcgcgacttgtc 47
>RF01062;MIR812;AAAA02028890.1/13277-13446 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 8e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gtatttttattgttgttagatgataaaacatgattaatactttatgcgtgacttgtc 65
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacg 223
|||||||||||||||||||||||||| |||||
Sbjct: 37 caaataagacggacggtcaaacgttgaacacg 6
>RF01062;MIR812;AAAA02014615.1/16058-15892 39946:Oryza sativa Indica
Group
Length = 167
Score = 97.6 bits (49), Expect = 8e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 118 gtattttcattgttgttagatgataaaatatgattaataatttatgcgtgacttgtc 62
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||| || ||||||| ||||||||||||||
Sbjct: 36 aaataagacgaacagtcaaacattggacacggaaac 1
>RF01062;MIR812;AAAA02030404.1/51970-52141 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 125 ataattagtattttcattgttgttagatgataaaacatgattaatactttatacgtgact 66
Query: 161 t 161
|
Sbjct: 65 t 65
>RF01062;MIR812;AP008214.1/25482476-25482305 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 ataattagtatttttattgttgttagatgataaaacatgattaacattttatgcgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttgga 219
|||||||||||||| ||||||||||||
Sbjct: 36 aaataagacggacgatcaaacgttgga 10
>RF01062;MIR812;AAAA02036402.1/899-1069 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 126 ataattagtattttcattgttgtcagatgataaaacatgattaatactttatgcgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
||||||||| ||||||||||| |||||| |||||||
Sbjct: 37 caaataagatggacggtcaaatgttggatacggaaa 2
>RF01062;MIR812;AL662987.3/138827-138657 39947:Oryza sativa Japonica
Group
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 108 gtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 120 gtattttcattgttgttagatgataaaatatgattaataatttatgcgtgacttgtc 64
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||| |||||||||||||||||||||
Sbjct: 38 aaataagacggatagtcaaacgttggacacggaaa 4
>RF01062;MIR812;AACV01005276.1/233-64 39947:Oryza sativa Japonica
Group
Length = 170
Score = 97.6 bits (49), Expect = 8e-20
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||| ||||||||| | ||||| |||||| || ||||||| ||||||
Sbjct: 169 tttccgtgttcaactttgactatccgttttatataaattttttttataattcatattttt 110
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 109 attgatgttagatgataaaacatgataaatattttatgcgtgacttgtc 61
>RF01062;MIR812;AB469057.1/5030-5204 40149:Oryza meridionalis
Length = 175
Score = 97.6 bits (49), Expect = 8e-20
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||| ||||| ||| ||||||||||||| |||||| |||||||
Sbjct: 174 tttccgtgtccaacatttgactgttcgtcttatatgaaatttttttataattagtatttt 115
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgac 159
||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 114 tattattgttagatgataaaacatgattaatattttatgtgtgac 70
>RF01062;MIR812;AP008207.1/20228121-20227949 39947:Oryza sativa
Japonica Group
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataattagtatttttatcgttgttagatgataaaacatgattaatattttatgcgtgact 67
Query: 161 t 161
|
Sbjct: 66 t 66
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||| |||||||||||||||||||||
Sbjct: 37 caaataagacggacgatcaaacgttggacacggaaac 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaa 92
||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 1 gtttccgtgtccaacgtttgatcgtccgtcttatttgaa 39
>RF01062;MIR812;AAAA02015002.1/47019-46851 39946:Oryza sativa Indica
Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatgataaaa 135
||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 152 tgtccgtcttatatgaaatttttttataattagtattttcattgttgttagatgataaaa 93
Query: 136 catgattaatattttatgcgtgacttgtc 164
||| |||| |||||||||||||| |||||
Sbjct: 92 cataattattattttatgcgtgatttgtc 64
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgtt 216
|||||||||||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgtt 13
>RF01062;MIR812;AAAA02005181.1/37543-37377 39946:Oryza sativa Indica
Group
Length = 167
Score = 97.6 bits (49), Expect = 8e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 113 tattttcattgttgttagatgataaaacatgattaatactttatgcgtgactt 61
>RF01062;MIR812;AAAA02028537.1/1825-1993 39946:Oryza sativa Indica
Group
Length = 169
Score = 97.6 bits (49), Expect = 8e-20
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||||||| | ||| |||||||||||| ||||||| ||||||
Sbjct: 168 tttccgtgtccaactttaacagtctgtcttatatgaaatttttttataattcatattttt 109
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 108 att-ttgttagatgataaaacatgattaatattttatacgtgacttgtc 61
>RF01062;MIR812;AACV01005603.1/28131-28297 39947:Oryza sativa
Japonica Group
Length = 167
Score = 97.6 bits (49), Expect = 8e-20
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 60 cgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattg 119
||||||||| ||||| ||||||||| ||||||| |||||| ||||||| |||
Sbjct: 162 cgtgtccaattttgactgtccgtctcatatgaaatttttttataatttgtatttttattt 103
Query: 120 ttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 102 ttgttagatgataagacatgattaatattttatgggtgacttgtc 58
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||| || ||||||
Sbjct: 36 aaataagacggacggtcaaacgttgggcatggaaac 1
>RF01062;MIR812;AP003302.2/67847-68020 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 128 ataattagtattttcattgttgttagatgataaaacataattaatattttatacgtgact 69
Query: 161 t 161
|
Sbjct: 68 t 68
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacg 223
||||||||||| |||||||||||||||||
Sbjct: 141 ataagacggacagtcaaacgttggacacg 169
>RF01062;MIR812;AAAA02002100.1/4948-5119 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
||||||||||||| ||| ||| || || ||||||||| ||||||||||||||
Sbjct: 171 tttccgtgtccaattttaattatctgttttatatgaaatttttttataattcgtattttt 112
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||| ||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 111 attgttggtagataataaaacatgattaatattttatgcgtaacttgtc 63
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||||||||| |||||||| |||||
Sbjct: 36 aaataagacggacggtcaaatgttggacatggaaa 2
>RF01062;MIR812;AACV01002066.1/3011-2839 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttc 115
|||||||||| |||||| | ||||||| |||||| || ||||||| ||||||
Sbjct: 172 tttccgtgtctaactttaactgtccgttttatataaaaattttttataattcatattttt 113
Query: 116 attgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 112 atttttgttagatgataaaatatgattaatattttatgcgtgacttgtc 64
>RF01062;MIR812;AAAA02023361.1/6946-7118 39946:Oryza sativa Indica
Group
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
|||||||||||||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 172 tttccgtgtccaacgtttgattgtccgtcttatatgaaatttttttataattagtatttt 113
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgacttgt 163
||| ||| ||||||||||||||||||||||| |||||| | |||||||
Sbjct: 112 catggttactagatgataaaacatgattaatactttatgtgcgacttgt 64
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||| ||||||||||
Sbjct: 37 caaataagacggacggtcaaacgtttaacacggaaac 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaa 227
||||||||||| ||||||||||||||||||||
Sbjct: 140 ataagacggacaatcaaacgttggacacggaaa 172
>RF01062;MIR812;AAAA02007822.1/9152-9321 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 124 ataattcgtatttttattattgttagatgatataacatgattaatattttatgcgtgact 65
Query: 161 t 161
|
Sbjct: 64 t 64
>RF01058;MIR806;CR855021.1/38470-38230 4530:Oryza sativa (rice)
Length = 241
Score = 97.6 bits (49), Expect = 8e-20
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 51 tttgactgtccgtcttatatgaaatttttttataattaatattttcattgttgttagatg 110
Query: 130 ataaaacatgattaatattttatgcgtga 158
||||||||||||||||| |||||||||||
Sbjct: 111 ataaaacatgattaatactttatgcgtga 139
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 192 caaataagacggacggtcaaacgttggacacggaaaccagagtttgtc 239
||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 171 caaataagacggacggttaaacgttggacacggaaaccagggtttgtc 218
>RF01062;MIR812;AAAA02000167.1/2338-2510 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 127 ataattcgtattttaattgttgttagatgataaaacattatttatattttatacgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgtt 216
||||||||||||||||||||||||
Sbjct: 37 aaataagacggacggtcaaacgtt 14
>RF01062;MIR812;AACV01022046.1/2744-2576 39947:Oryza sativa Japonica
Group
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 123 ataattagtattttcattattattagatgataaaacatgattaatactttatgcgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacac 222
||||||||||| ||||||||||||||||
Sbjct: 136 ataagacggacagtcaaacgttggacac 163
>RF01062;MIR812;AAAA02030431.1/2515-2361 39946:Oryza sativa Indica
Group
Length = 155
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct: 115 ataattagtattttcattgttattagatggtaaaacatgattaatactttatgcgtgact 56
Query: 161 tgtc 164
||||
Sbjct: 55 tgtc 52
>RF01062;MIR812;AAAA02004346.1/60219-60382 39946:Oryza sativa Indica
Group
Length = 164
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 118 ataattagtattttcattattgttagatgataaaacatgattaataatttatgtgtgact 59
Query: 161 tgtc 164
||||
Sbjct: 58 tgtc 55
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaacc 229
|||||||||||||| |||||||||| ||||||||||||
Sbjct: 41 caaataagacggacagtcaaacgttagacacggaaacc 4
Score = 46.1 bits (23), Expect = 3e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 51 ctgggtttccgtgtccaac-tttgattgtccgtcttatatgaa 92
||||||||||||||| ||| ||||| |||||||||||| ||||
Sbjct: 1 ctgggtttccgtgtctaacgtttgactgtccgtcttatttgaa 43
>RF01062;MIR812;AAAA02008299.1/7672-7833 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 115 ataattagtatttttattattgttagatgataaaacatgattaatattttatacgtgact 56
Query: 161 tgtc 164
||||
Sbjct: 55 tgtc 52
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 193 aaataagacggacggtcaaacgttggacacggaaa 227
||||||||||||||||||| |||||||||||||||
Sbjct: 127 aaataagacggacggtcaatcgttggacacggaaa 161
>RF01062;MIR812;AAAA02034122.1/2047-1872 39946:Oryza sativa Indica
Group
Length = 176
Score = 95.6 bits (48), Expect = 3e-19
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 161 tttgattgtccatcttatatgaaaattttttataattagtatttttattgttgttagatg 102
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||| ||||||| ||||||
Sbjct: 101 ataaaacatgattaatactttatgcttgactt 70
>RF01062;MIR812;AP008207.1/40272916-40273089 39947:Oryza sativa
Japonica Group
Length = 174
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 125 taattagtattttcattgttgttagatgataaaacaagattaatactttatgcgtgactt 66
>RF01062;MIR812;AAAA02009156.1/724-890 39946:Oryza sativa Indica
Group
Length = 167
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 123 ataattagtatttttattgttgttagatgataaaacatgattaatactttatgtgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
>RF01062;MIR812;AAAA02027802.1/17760-17610 39946:Oryza sativa Indica
Group
Length = 151
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 123 taattagtatttttattgttgttagatgataaaacataattaatattttatgcgtgactt 64
>RF01062;MIR812;AAAA02017197.1/11574-11405 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 125 ataattcgtatttttatcgttgttagatgataaaatatgattaatattttatgcgtaact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
>RF01062;MIR812;AAAA02025501.1/39196-39367 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||
Sbjct: 126 ataattcgtatttttattgttattagatgataaaacatgattaatactttgtgcgtgact 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
>RF01062;MIR812;AAAA02017523.1/1914-2075 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 116 ataattagtattttcattgttgttagatgataaaacatgattaatactttatctgtgact 57
Query: 161 tgtc 164
||||
Sbjct: 56 tgtc 53
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaacc 229
|||||||| |||||||||||||||||||||||||||||
Sbjct: 39 caaataaggcggacggtcaaacgttggacacggaaacc 2
>RF01062;MIR812;AC091302.5/14413-14235 39947:Oryza sativa Japonica
Group
Length = 179
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 126 ataactcgtattttcattgttgttagatgataaaatatgattaatattttatacgtgatt 67
Query: 161 tgtc 164
||||
Sbjct: 66 tgtc 63
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 caaataagacggacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AAAA02021409.1/31003-31169 39946:Oryza sativa Indica
Group
Length = 167
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 ataatttgtatttttattgttattagatgataaaatatgattaatattttatgcgtgact 62
Query: 161 tgtc 164
||||
Sbjct: 61 tgtc 58
>RF01062;MIR812;AAAA02007919.1/32-200 39946:Oryza sativa Indica
Group
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 70 tttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgttagatg 129
||||| ||||||||||||||||| |||||| ||||||||||||| |||||||
Sbjct: 153 tttgactgtccgtcttatatgaagtttttttataattaatattttcattgttattagatg 94
Query: 130 ataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||| ||||||||||||||
Sbjct: 93 ataaaacatgattaatactttatgcgtgactt 62
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||| || |||||||||||| |||||
Sbjct: 37 caaataagacggacagttaaacgttggacatggaaa 2
>RF01062;MIR812;AP008217.1/16959906-16960074 39947:Oryza sativa
Japonica Group
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||
Sbjct: 123 ataattagtattttcattgttgttagatgataaaacataatcaatactttatgcgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
>RF01062;MIR812;AAAA02006914.1/14063-14238 39946:Oryza sativa Indica
Group
Length = 176
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 129 ataattagtattttcattgttgttagatgataaaaaatgattaatatcttatgcgtgacc 70
Query: 161 tgtc 164
||||
Sbjct: 69 tgtc 66
>RF01062;MIR812;AP008210.1/18216776-18216610 39947:Oryza sativa
Japonica Group
Length = 167
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 110 tattttcattgttgttagatgataaaacatgattaatactttatgcgtgatttgtc 55
>RF01062;MIR812;AAAA02007686.1/14853-15025 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 125 ataattagtatttttattgttgttagatgatagaacatgattaatattttatgcgcgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaa 227
|||||||||||||||||||||| ||| |||||||||
Sbjct: 37 caaataagacggacggtcaaacattgaacacggaaa 2
>RF01062;MIR812;AACV01020364.1/24044-23870 39947:Oryza sativa
Japonica Group
Length = 175
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 127 ataattagtatttttattgttgttagatgataaaacatgattaatactttatgcgtgatt 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
>RF01062;MIR812;ABRL01001104.1/6580-6736 65489:Oryza barthii
Length = 157
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 114 ataattagtattttcattgttgttagatgataaaacataattaatactttattcgtgact 55
Query: 161 tgtc 164
||||
Sbjct: 54 tgtc 51
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacgga 225
||||||||||||||||| ||||||| ||||||||
Sbjct: 37 caaataagacggacggttaaacgttagacacgga 4
>RF01062;MIR812;AACV01010622.1/22790-22965 39947:Oryza sativa
Japonica Group
Length = 176
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 109 tattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 tatttttattgttgttagatgataaaacatgattaatactttatgcgtgacttgtc 66
>RF01062;MIR812;AC087797.5/112603-112434 4530:Oryza sativa (rice)
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 127 ataattagtatttttattgttgttagatgataaaacatgattaatactttatacgtgact 68
Query: 161 tgtc 164
||||
Sbjct: 67 tgtc 64
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
||||||||||| |||||||||||||||||||||||||
Sbjct: 37 caaataagacgaacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AACV01023316.1/14889-14721 39947:Oryza sativa
Japonica Group
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 122 ataattagtattttcattgttgttagatgat-aaacatgattaatactttatgcgtgact 64
Query: 161 tgtc 164
||||
Sbjct: 63 tgtc 60
Score = 71.9 bits (36), Expect = 5e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||||||||||||
Sbjct: 36 aaataagacggacggtcaaacgttggacacggaaac 1
>RF01062;MIR812;AP003343.3/23253-23423 39947:Oryza sativa Japonica
Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 62 tgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtattttcattgtt 121
|||| |||||| | ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 164 tgtcaaactttaactgtccgtcttatatgaattttttttataattcgtatttttattgtt 105
Query: 122 gttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||| |||||||||||||| |||||||
Sbjct: 104 attagatgataaaacataattaatattttatgtgtgactt 65
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||||| || ||||||||||
Sbjct: 37 caaataagacggacggtcaaacattatacacggaaac 1
>RF01062;MIR812;AAAA02022714.1/3904-4068 39946:Oryza sativa Indica
Group
Length = 165
Score = 95.6 bits (48), Expect = 3e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 119 ataattcgtattt-cattgttgtgagatgataaaacatgattaatattttatgcatgact 61
Query: 161 tgtc 164
||||
Sbjct: 60 tgtc 57
>RF01062;MIR812;AAAA02023345.1/4249-4078 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 92/108 (85%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
|||||||| |||||| ||||||| ||| ||||||||||| |||||| ||||||
Sbjct: 172 gtttccgtatccaacgtttgattatccatcttatatgaaagttttttataattagtattt 113
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 112 tcattattgttagatgataaaacatgattaatactttatgcgtaactt 65
>RF01062;MIR812;AP008215.1/21325950-21325780 39947:Oryza sativa
Japonica Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 125 ataatttgtatttttattgttgttagatgataaaacatgattaatattttatatgtgact 66
Query: 161 tgtc 164
||||
Sbjct: 65 tgtc 62
>RF01062;MIR812;AP003704.3/36938-37111 39947:Oryza sativa Japonica
Group
Length = 174
Score = 95.6 bits (48), Expect = 3e-19
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 76 tgtccgtcttatatgaannnnnnnnataattcgtattttcattgttgtta--gatgataa 133
||||||||||||||||| |||||| |||||||||||||||||| ||||||||
Sbjct: 152 tgtccgtcttatatgaaatttttttataattagtattttcattgttgttatagatgataa 93
Query: 134 aacatgattaatattttatgcgtgacttgtc 164
||||||||||||| |||||||||||||||||
Sbjct: 92 aacatgattaatactttatgcgtgacttgtc 62
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||||||||||||||||||||| ||||
Sbjct: 36 aaataagacggacggtcaaacgttggacacgaaaac 1
>RF01058;MIR806;AAAA02021765.1/43698-43938 39946:Oryza sativa Indica
Group
Length = 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 102/120 (85%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 43 gacaaaccctgggtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnna 101
|||||||| ||| |||||||| ||||| ||||| ||||||||||||||||| |
Sbjct: 217 gacaaaccgtggatttccgtg-ccaacgtttgactgtccgtcttatatgaaattttttta 159
Query: 102 taattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 158 taattagtattttcattgttgttagataataaaacatgattaatactttacacgtgactt 99
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttgg 218
||||||||||||||||||||| |||||
Sbjct: 71 caaataagacggacggtcaaatgttgg 45
>RF01062;MIR812;AACV01005094.1/384-212 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 63 gtccaactttgattgtccgtcttatatg-aannnnnnnnataattcgtattttcattgtt 121
|||||||||||| ||||||||||||||| || |||||||||||||||||||||
Sbjct: 165 gtccaactttgactgtccgtcttatatggaaatttttttataattcgtattttcattgtt 106
Query: 122 gttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||||| ||||| ||||||||||||||||||| |||||||
Sbjct: 105 gttagatcttaaaatttgattaatattttatgcgtaacttgtc 63
>RF01062;MIR812;AP003255.3/99511-99348 39947:Oryza sativa Japonica
Group
Length = 164
Score = 93.7 bits (47), Expect = 1e-18
Identities = 91/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 56 tttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||| |||||| ||| ||||||||||||||||||| |||||| |||||
Sbjct: 163 tttccgtatccaacgtttaattgtccgtcttatatgaaatttttttataattaatatttc 104
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 103 cattgttgttagatgataaaacatgattaatactttatgcatgactt 57
>RF01062;MIR812;AAAA02009928.1/18502-18661 39946:Oryza sativa Indica
Group
Length = 160
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 115 ataattagtatttttattgttgttagatgataaaatatgattaatactttatgcgtgact 56
Query: 161 tgt 163
|||
Sbjct: 55 tgt 53
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||||||||| |||||| ||||||||
Sbjct: 36 aaataagacggacggtcaaatgttggatacggaaac 1
>RF01062;MIR812;AAAA02004628.1/116161-115995 39946:Oryza sativa
Indica Group
Length = 167
Score = 93.7 bits (47), Expect = 1e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 167 gtttccgtgtccaacgtttgactgtccgtcttatatgaaatttttttataattagtattt 108
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
| ||||||||| ||||||||||||||| |||| |||||| ||||||||||
Sbjct: 107 tgtttgttgttaaatgataaaacatgatcaatactttatgtgtgacttgtc 57
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| ||||||||||||||||||||||
Sbjct: 134 ataagacggacagtcaaacgttggacacggaaac 167
>RF01062;MIR812;AACV01014086.1/6692-6862 39947:Oryza sativa Japonica
Group
Length = 171
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 103 aattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
|||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 123 aatttgtattttcattgttgttagatgataaaacataattaatattttatgcttgactt 65
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 192 caaataagacggacggtcaaacgttggacacggaaac 228
|||||||||||||| |||||||||| |||||||||||
Sbjct: 37 caaataagacggacagtcaaacgttagacacggaaac 1
>RF01062;MIR812;AACV01012310.1/6896-6738 39947:Oryza sativa Japonica
Group
Length = 159
Score = 93.7 bits (47), Expect = 1e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaac-tttgattgtccgtcttatatgaannnnnnnnataattcgtattt 113
||||| ||||||||| ||||| ||||||||||||||||| |||||| ||||
Sbjct: 159 gtttctgtgtccaacgtttgactgtccgtcttatatgaaattattttataattaccattt 100
Query: 114 tcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtc 164
||||| || |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 99 tcattatttttagatgataaaacatgattaatactttatgcgtgacttgtc 49
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 195 ataagacggacggtcaaacgttggacacggaaac 228
||||||||||| |||||||||||||||| |||||
Sbjct: 126 ataagacggacagtcaaacgttggacacagaaac 159
>RF01062;MIR812;AAAA02021902.1/36247-36421 39946:Oryza sativa Indica
Group
Length = 175
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgact 160
|||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 128 ataattagtattttgattgttgttagatgataaaacatgattaatactttatgtgtgact 69
Query: 161 tgt 163
|||
Sbjct: 68 tgt 66
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
||||||||||||| ||||||||||||||||| ||||
Sbjct: 36 aaataagacggacagtcaaacgttggacacgaaaac 1
>RF01062;MIR812;AAAA02019237.1/36164-36339 39946:Oryza sativa Indica
Group
Length = 176
Score = 93.7 bits (47), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 4/68 (5%)
Strand = Plus / Minus
Query: 101 ataattcgtattttcattgttgtta----gatgataaaacatgattaatattttatgcgt 156
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 130 ataattcgtattttcattgttgttacttagatgataaaacatgattaatattttatgcat 71
Query: 157 gacttgtc 164
||||||||
Sbjct: 70 gacttgtc 63
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 193 aaataagacggacggtcaaacgttggacacggaaac 228
|||||||||| ||||||||||||||| |||||||||
Sbjct: 36 aaataagacgaacggtcaaacgttgggcacggaaac 1
>RF01062;MIR812;AP005385.3/119099-118929 39947:Oryza sativa Japonica
Group
Length = 171
Score = 93.7 bits (47), Expect = 1e-18
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 55 gtttccgtgtccaactttgattgtccgtcttatatgaannnnnnnnataattcgtatttt 114
||||||||||| | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 171 gtttccgtgtcaatgtttgactgtccgtattatatgaaaattttttataattagtatttt 112
Query: 115 cattgttgttagatgataaaacatgattaatattttatgcgtgactt 161
||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 111 tattgttgttagatgataaaacatgattaatactttatacgtgactt 65
