miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 391 bits (197), Expect = e-108
Identities = 231/241 (95%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||||||||||| |||||||| ||||| |||||||||| |||||
Sbjct: 1 atactccctccgttttgaaatgtttgacaccgttgacttttta-gcacatgtttaaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 120 taaatatattttcatgtaggcatataattttacatatttcacaaaaatttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 239
Query: 249 a 249
|
Sbjct: 240 a 240
Score = 123 bits (62), Expect = 1e-27
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttca 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 119 bits (60), Expect = 2e-26
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 241 atactccctccgtttcgaaatgtttgacaccgttgac-tttttagcacatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 303 bits (153), Expect = 6e-82
Identities = 180/189 (95%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 107
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||
Sbjct: 108 tgattcattgttaaatatatttttatgtaggcatataattttatatattttacaaaagtt 167
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 168 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacattttgaa 227
Query: 238 acggaggga 246
| |||||||
Sbjct: 228 atggaggga 236
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
||||||| |||| |||||||||| |||||||| ||||| |||||||||| |||||||||
Sbjct: 236 tccctccatttcaaaatgtttgataccgttgacttttta-gcacatgtttaaccgttcgt 178
Query: 73 cttattcaaaaa 84
||||||||||||
Sbjct: 177 cttattcaaaaa 166
>RF01058;MIR806;AAAA02009498.1/6852-7093 39946:Oryza sativa Indica
Group
Length = 242
Score = 295 bits (149), Expect = 2e-79
Identities = 220/241 (91%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||||||||||||||||||| || ||||||| | |||| ||||||||||
Sbjct: 2 tactccctccgtttcgaaatgtttgacgccattaacatttttaa-acatatttgaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattattaattcttttcttatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||| ||| |||||||||||||||||||||| | |||| |||| ||||||||
Sbjct: 121 aaatatatttttatgtaggcatataattttacatattttataaaaattttcgaataagac 180
Query: 190 gaacggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| || ||| |||||| |||||||||||||||||||| ||| |||||||||
Sbjct: 181 gaacggtcaaacatatgcttaaaaaatcaacggtgtcaaacatttcaaaatggagggagt 240
Query: 249 a 249
|
Sbjct: 241 a 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| ||| |||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 242 atactccctccattttgaaatgtttgacaccgttgattttttaagcatatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||| ||||
Sbjct: 182 tcgtcttattcgaaaa 167
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| |||||||| |||| || || || |||||||||||||
Sbjct: 75 tttttgaataagacgaacggtcaaatatgtttaaaaatgttaatggcgtcaaacatttcg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AP008211.1/11219819-11220068 39947:Oryza sativa
Japonica Group
Length = 250
Score = 293 bits (148), Expect = 6e-79
Identities = 210/230 (91%), Gaps = 8/230 (3%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||| ||||||| ||||| |||||| |||||| |||||||||||||||||||
Sbjct: 22 aaatgtttgacgtcgttgacttttta-gcacatatttgactgttcgtcttattcaaaaaa 80
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 81 tttaagtaattattaattcttttcttatcatttgattcattgttaaatatattttcatgt 140
Query: 146 aggcatataattttacatatttcacaaaagt-------ttttgaataagatgaacggtta 198
||||||||||||||||||||||||||||||| |||||||||||| |||||| |
Sbjct: 141 aggcatataattttacatatttcacaaaagtttttaacttttgaataagacaaacggtca 200
Query: 199 aatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
|| ||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 201 aacatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggagt 250
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 actccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttc 70
|||||||||||||| |||| |||||| |||||||| ||||| |||||||||||||||||
Sbjct: 250 actccctccgtttcaaaatatttgacaccgttgacttttta-gcacatgtttgaccgttt 192
Query: 71 gtcttattcaaaa 83
|||||||||||||
Sbjct: 191 gtcttattcaaaa 179
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 79 tttttgaataagacgaacagtcaaatatgtgctaaaaagtcaacgacgtcaaacattt 22
>RF01058;MIR806;AC137620.2/65289-65525 39947:Oryza sativa Japonica
Group
Length = 237
Score = 283 bits (143), Expect = 6e-76
Identities = 182/195 (93%)
Strand = Plus / Plus
Query: 48 tttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttt 107
|||||| |||||||||||||||||||||||| |||||| |||| || |||||||||||||
Sbjct: 35 tttaagtacatgtttgaccgttcgtcttatttaaaaaaattaaatagttattaattcttt 94
Query: 108 tcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatattt 167
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 95 tcctatcatttgattcattgttaaatatatttttatgtaggcatataattttacatattt 154
Query: 168 cacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaa 227
||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 155 cacgaaagtttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgttaa 214
Query: 228 acatttcgaaacgga 242
| |||| ||||||||
Sbjct: 215 atattttgaaacgga 229
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| ||| || |||||||| ||||| |||||||||| |||||||||||||
Sbjct: 229 tccgtttcaaaatatttaacaccgttgacttttta-gcacatgtttaaccgttcgtctta 171
Query: 77 ttcaaaaa 84
||||||||
Sbjct: 170 ttcaaaaa 163
>RF01058;MIR806;AACV01024800.1/18542-18302 39947:Oryza sativa
Japonica Group
Length = 241
Score = 281 bits (142), Expect = 2e-75
Identities = 201/218 (92%), Gaps = 2/218 (0%)
Strand = Plus / Plus
Query: 27 aatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaat 86
||||||||||||| ||||| | ||| |||||||||| ||||||||| ||||| |||||||
Sbjct: 21 aatgtttgacgccattgacttctta-gcacatgtttaaccgttcgttttatttaaaaaat 79
Query: 87 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgca 146
| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||| |
Sbjct: 80 t-aagtaattattaattcttttcatatcatttgattcattgttaaatatatctttatgta 138
Query: 147 ggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtg 206
|||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| || ||
Sbjct: 139 ggcatataattttatatatttcacaaaagtttttgaataagacgaacggtcaaacatctg 198
Query: 207 ctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ctaaaaagtcaacggtgtcaaacatttcgaaacggagg 236
Score = 99.6 bits (50), Expect = 2e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
|||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||
Sbjct: 236 cctccgtttcgaaatgtttgacaccgttgacttttta-gcagatgtttgaccgttcgtct 178
Query: 75 tattcaaaaa 84
||||||||||
Sbjct: 177 tattcaaaaa 168
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatt 232
||||| ||||| | ||||||||||| ||||||||| ||||||| || ||||||||||
Sbjct: 77 tttttaaataaaacgaacggttaaacatgtgctaagaagtcaatggcgtcaaacatt 21
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 276 bits (139), Expect = 1e-73
Identities = 179/191 (93%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
|||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 cctccgtttcaaaatgtttgacaccgttgacttttta-gcacatgtttgaccgttcgtct 59
Query: 75 tattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaata 134
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tattcaaaaattttaagtagttattaattcttttcctatcatttgattcattgttaaata 119
Query: 135 tattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacg 194
|||||| ||| |||||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 120 tatttttatgtaggcatataattttacatatttaacaaaagtttttgaatgagacgaacg 179
Query: 195 gttaaatatgt 205
|||||| ||||
Sbjct: 180 gttaaacatgt 190
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| |
Sbjct: 69 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttg 10
Query: 236 aaacggagg 244
|||||||||
Sbjct: 9 aaacggagg 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||| ||||||||||| |||||||||
Sbjct: 190 acatgtttaaccgttcgtctcattcaaaaa 161
>RF01058;MIR806;AP008213.1/24894769-24894520 39947:Oryza sativa
Japonica Group
Length = 250
Score = 272 bits (137), Expect = 2e-72
Identities = 201/221 (90%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
||||||||||||||||| |||||||||| ||||| || |||||||||| |||||||||
Sbjct: 9 tccgtttcgaaatgtttaacgccgttgattttttat-catatgtttgaccattcgtctta 67
Query: 77 ttcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatata 136
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tttaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatata 127
Query: 137 ttttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggt 196
|||| ||| || ||||||||||||||||| ||| ||||||||| ||||| | |||||||
Sbjct: 128 tttttatgtagacatataattttacatatctcataaaagttttaaaataaaacgaacggt 187
Query: 197 taaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||||||||||||||||||| || | ||||||||||||||||
Sbjct: 188 taaatatgtgctaaaaagttaatgatgtcaaacatttcgaa 228
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||| ||| ||| || || |||||| ||||||| || ||||||||||
Sbjct: 75 tttttaaataagacgaatggtcaaacatatgataaaaaatcaacggcgttaaacatttcg 16
Query: 236 aaacgga 242
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AP008212.1/224770-225009 39947:Oryza sativa Japonica
Group
Length = 240
Score = 270 bits (136), Expect = 9e-72
Identities = 185/200 (92%), Gaps = 1/200 (0%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 38 tttttagcacatatttaaccgtttgtcttatttaaaaaatttaagtaattattaattctt 97
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 98 tttctatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatt 157
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
||| |||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||| |
Sbjct: 158 tcataaaagttttt-aataagacgaacggtcaaatatgtgctaaaaagtcaatggtgtta 216
Query: 227 aacatttcgaaacggaggga 246
|||||||||||||| |||||
Sbjct: 217 aacatttcgaaacgaaggga 236
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
||||| ||||||||||||||| || || ||||| ||||| |||||| |||||||||||||
Sbjct: 236 tcccttcgtttcgaaatgtttaacaccattgacttttta-gcacatatttgaccgttcgt 178
Query: 73 cttattcaaaa 83
|||||| ||||
Sbjct: 177 cttattaaaaa 167
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct: 75 tttttaaataagacaaacggttaaatatgtgctaaaaagttaataaagtcaaacatttcg 16
Query: 236 aaac 239
||||
Sbjct: 15 aaac 12
>RF01058;MIR806;AACV01000992.1/4670-4911 39947:Oryza sativa Japonica
Group
Length = 242
Score = 268 bits (135), Expect = 4e-71
Identities = 215/239 (89%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||||||||||||||||| |||||| ||||| | ||||||||||||||
Sbjct: 1 atactacctccgtttcgaaatgtttgacgctgttgacttttta-gtacatgtttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttga-ttcattg 127
||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtagttattaattcttttcctatcaattgaattcattg 119
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
|||| ||||||| ||| ||||||||||||||| |||||||||||||||||| || || |
Sbjct: 120 ttaaggatattttaatgtaggcatataattttatatatttcacaaaagttttggattagg 179
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
| |||||| ||||||| |||||||||| ||||||||||||| ||| ||||||| ||||
Sbjct: 180 accaacggtcaaatatgggctaaaaagtaaacggtgtcaaacttttggaaacgggggga 238
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| |||| ||||||||||||| | |||||||||||||
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtactaaaaagtcaacagcgtcaaacatttcg 16
Query: 236 aaacggagggagta 249
||||||||| ||||
Sbjct: 15 aaacggaggtagta 2
>RF01058;MIR806;AP008215.1/9244991-9244779 39947:Oryza sativa
Japonica Group
Length = 213
Score = 268 bits (135), Expect = 4e-71
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaattt-aagtaattattaattcttttcctatcattt 118
||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||||||
Sbjct: 23 tttgaccgttcgtcttattaaaaaaaattgaagtaattattaattcttttcatatcattt 82
Query: 119 gattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagttt 178
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 83 gattcattgttaaatatatttttatgtaggcatataattttacatatttcacaaaagttt 142
Query: 179 ttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
|||||||||| |||| || ||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 143 ttgaataagacgaac-gtcaaacatgtgctaaaaagtcaatggtgtcaaatatttcgaaa 201
Query: 239 cggagggagta 249
|||||||||||
Sbjct: 202 cggagggagta 212
Score = 87.7 bits (44), Expect = 7e-17
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||||||| |||||| || ||||| |||| ||||||||||||| |||
Sbjct: 213 atactccctccgtttcgaaatatttgacaccattgac-tttttagcacatgtttga-cgt 156
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 155 tcgtcttattcaaaaa 140
>RF01058;MIR806;AAAA02017197.1/13871-14114 39946:Oryza sativa Indica
Group
Length = 244
Score = 264 bits (133), Expect = 6e-70
Identities = 191/209 (91%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 34 gacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagta 93
||||||||| |||||||| | |||||||| ||||||||||||||| |||||| |||||||
Sbjct: 29 gacgccgttaacatttta-gtacatgtttaaccgttcgtcttatttaaaaaaattaagta 87
Query: 94 attattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatat 153
|||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 88 gttattaattctttttctatcatttgattctttgttaaatatatttttatgtaggcatat 147
Query: 154 aattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaa 213
||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 148 aattttacatatttcacgaaagtttttgaataagaagaatggttaaacatgtgctaaaaa 207
Query: 214 gtcaacggtgtcaaacatttcgaaacgga 242
||||||||||| ||| |||| ||||||||
Sbjct: 208 gtcaacggtgttaaatattttgaaacgga 236
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| ||| || |||||||| ||||| |||||||||| ||| ||| |||||
Sbjct: 236 tccgtttcaaaatatttaacaccgttgacttttta-gcacatgtttaaccattcttctta 178
Query: 77 ttcaaaaa 84
||||||||
Sbjct: 177 ttcaaaaa 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 221
||||| ||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 78 tttttaaataagacgaacggttaaacatgtactaaaatgttaacgg 33
>RF01058;MIR806;AP008218.1/2341667-2341904 39947:Oryza sativa
Japonica Group
Length = 238
Score = 264 bits (133), Expect = 6e-70
Identities = 172/185 (92%)
Strand = Plus / Plus
Query: 65 ccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattca 124
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 53 ccgttcgtattattcaaaaaatttaagtaattattaattattttcctatcatttgattta 112
Query: 125 ttgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaat 184
|| ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 113 ttattaaatatatttttatgtaggcatataattttatatatttcacaaaagtttttgaat 172
Query: 185 aagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||| |||||||||| || ||||||||||| |||||||||||| |||||||||||||||
Sbjct: 173 aagacaaacggttaaacatatgctaaaaagttaacggtgtcaaatatttcgaaacggagg 232
Query: 245 gagta 249
|||||
Sbjct: 233 gagta 237
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||||||| |||||| ||||| || |||| |||| |||||| |||||
Sbjct: 238 atactccctccgtttcgaaatatttgacaccgttaac-tttttagcatatgtttaaccgt 180
Query: 69 tcgtcttattcaaaaa 84
| ||||||||||||||
Sbjct: 179 ttgtcttattcaaaaa 164
>RF01062;MIR812;AACV01000759.1/1650-1823 39947:Oryza sativa Japonica
Group
Length = 174
Score = 260 bits (131), Expect = 9e-69
Identities = 156/163 (95%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 acatgtttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatc 104
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 103 atttgattcattgttaaatatatttttatgtaggcatataattttacatatttcacaaaa 44
Query: 175 -gtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 43 tttttttgaataagacgaacggttaaacatgtgctaaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttaaccgttcgtcttattcaaaaaa 42
>RF01058;MIR806;ABRL01000517.1/8497-8737 65489:Oryza barthii
Length = 241
Score = 260 bits (131), Expect = 9e-69
Identities = 209/231 (90%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
||||||||||||||||||||||| || |||| || ||||| |||||||||||||||||||
Sbjct: 4 ctccctccgtttcgaaatgtttggcgtcgttaacttttta-gcacatgtttgaccgttcg 62
Query: 72 tcttattcaaaaaattt-aagtaattattaattcttttcctatcatttgattcattgtta 130
||||||||||||| ||| |||||||||||| || ||||| |||||||||||||||| |||
Sbjct: 63 tcttattcaaaaacttttaagtaattattattt-ttttcatatcatttgattcattatta 121
Query: 131 aatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatg 190
|||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||| |
Sbjct: 122 aatatatttttatgtaggcatataattttacatatttcataaaaggttttgaataagacg 181
Query: 191 aacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgg 241
|||||| ||| |||||||||||| ||||| | || ||||||||||||||||
Sbjct: 182 aacggtcaaacatgtgctaaaaaatcaacagcgttaaacatttcgaaacgg 232
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 171 aaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaaca 230
|||||||||||||||||| ||||||| ||| |||||||||||||| |||| | ||||||
Sbjct: 80 aaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagttaacgacgccaaaca 21
Query: 231 tttcgaaacggagggag 247
|||||||||||||||||
Sbjct: 20 tttcgaaacggagggag 4
Score = 83.8 bits (42), Expect = 1e-15
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 18 ccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttat 77
|||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 232 ccgtttcgaaatgtttaacgctgttgatttttta-gcacatgtttgaccgttcgtcttat 174
Query: 78 tcaaaa 83
||||||
Sbjct: 173 tcaaaa 168
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 260 bits (131), Expect = 9e-69
Identities = 211/235 (89%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||||||||| |||||||| ||||| |||||||||| ||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgataccgttgacttttta-gcacatgtttaaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattattaatttttttc-tatcatttgattcgttgtt 119
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||| ||| || |||||||||||||||||| | ||||||||||||||||||
Sbjct: 120 aaatatatttttatgtagatatataattttacatattttataaaagtttttgaataagac 179
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||||||||| |||||||||||||||||||||| ||| |||| ||||| ||||
Sbjct: 180 aaacggttaaacatgtgctaaaaagtcaacggtgctaaatattttgaaacagagg 234
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 75 ttttttaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 38 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 211 ccgttgacttttta-gcacatgtttaaccgtttgtcttattcaaaaa 166
>RF01058;MIR806;AC210447.1/112690-112455 4538:Oryza glaberrima
(African rice)
Length = 236
Score = 258 bits (130), Expect = 3e-68
Identities = 207/230 (90%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| |||| ||||| |||||| || ||||| |||||| ||| ||||||
Sbjct: 2 tactcgctccgtttcaaaatatttgaggccgttaacttttta-gcacatattttaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 tgtcttattaaaaaaatttaagtaattattaattattttcctatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaag-tttttgaataaga 188
||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 121 aaatatatttttatgtaggcatataattttacatatttcataaaagttttttgaataaga 180
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
||| | | ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 181 cgaatgatcaaacatgtgctaaaaagtcaacggtgttaaacattttgaaa 230
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| |||||| |||||||||||||||||| ||||| ||||| |||| |
Sbjct: 75 ttttttaataagacaaacggtaaaatatgtgctaaaaagttaacggcctcaaatattttg 16
Query: 236 aaacggagggagta 249
|||||||| |||||
Sbjct: 15 aaacggagcgagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| |||||||| || |||||||| ||||| |||||||||||| | |||||||||||||
Sbjct: 230 tttcaaaatgtttaacaccgttgacttttta-gcacatgtttgatcattcgtcttattca 172
Query: 81 aaaaa 85
|||||
Sbjct: 171 aaaaa 167
>RF01058;MIR806;AACV01020567.1/776-1014 39947:Oryza sativa Japonica
Group
Length = 239
Score = 258 bits (130), Expect = 3e-68
Identities = 167/178 (93%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 72 tcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaa 131
|||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 62 tcttattcaaaa-atttaagtaattattaattctttttctatcatatgattcattgttaa 120
Query: 132 atatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatga 191
||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||||| | ||
Sbjct: 121 atatatttttatgtaggcatatacttttacatatttcacaaaagtttttaaataaaacga 180
Query: 192 acggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| |||||||| |||| ||||||||||| |||||
Sbjct: 239 atactccctccgtttcaaaatgtttgacaccgttgac-tttttagcacatgtttaaccgt 181
Query: 69 tcgtcttattcaaaaa 84
|||| ||||| |||||
Sbjct: 180 tcgttttatttaaaaa 165
>RF01058;MIR806;AAAA02006672.1/2828-3071 39946:Oryza sativa Indica
Group
Length = 244
Score = 258 bits (130), Expect = 3e-68
Identities = 219/247 (88%), Gaps = 10/247 (4%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||| |
Sbjct: 1 atactccctccgtttcgaattgtttgtcgccgttgactttttaagcacatgtttgaccat 60
Query: 69 tcgtcttattcaaaa-aatttaagtaattattaattcttttcctatcatttgattcattg 127
|| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatcttgtttaaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 120
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaa---- 183
|||||||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 ttaaatatttttt----taggcatataattttacatatttcacaaaagtttttcaataag 176
Query: 184 -taagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
||||||||| ||| |||||||||||||||| |||| |||||| | ||||| |||||||
Sbjct: 177 ctaagatgaatggtcaaatatgtgctaaaaattcaatagtgtcatatatttcaaaacgga 236
Query: 243 gggagta 249
|||||||
Sbjct: 237 gggagta 243
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||| || |||||||| ||| ||| ||||||| ||||||||||||| | |||||| |||
Sbjct: 76 tttttaaacaagatgaatggtcaaacatgtgcttaaaaagtcaacggcgacaaacaattc 17
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AAAA02029878.1/5753-5991 39946:Oryza sativa Indica
Group
Length = 239
Score = 256 bits (129), Expect = 1e-67
Identities = 214/240 (89%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||| ||| ||||||||| ||| |||||| ||||| ||||||||||||||||
Sbjct: 2 tactccctccttttgaaaatgtttgtcgctgttgactttttac-cacatgtttgaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 cgtcttattaaaaaaat--aagtaattattaattattttcctatcatttgattcattgtt 118
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||||||| |||||||||||||||||||| | |||||||||| ||||| |
Sbjct: 119 aaatatattttcatgttagcatataattttacatattttataaaagtttttaaataaaac 178
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| |||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 179 aaacagttaaacatgtgctaaaaagtcaacggtgtcaaatatttcgaatcggaggaagta 238
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||| ||| ||||| |||||||||||| | | |||||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacatgtggtaaaaagtcaacagcgacaaacattttc 16
Query: 236 aaacggagggagtac 250
||| |||||||||||
Sbjct: 15 aaaaggagggagtac 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||| |||||||| |||||| |||||||| ||||| |||||||||| || ||
Sbjct: 239 atacttcctccgattcgaaatatttgacaccgttgacttttta-gcacatgtttaactgt 181
Query: 69 tcgtcttattcaaaaa 84
| || ||||| |||||
Sbjct: 180 ttgttttatttaaaaa 165
>RF01058;MIR806;AAAA02027758.1/1941-1701 39946:Oryza sativa Indica
Group
Length = 241
Score = 256 bits (129), Expect = 1e-67
Identities = 196/217 (90%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| |||||||| |||||| |||||| |||||||||||||||| | |||||||||| |
Sbjct: 18 aaatatttgacgctgttgactctttaagtacatgtttgaccgttcatattattcaaaata 77
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 78 tttaagtagttattaattcttttcctaccatttgattcattgttaaatatatttttgtgt 137
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
|||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||| ||||
Sbjct: 138 aggcatataattttacatatttcataaaagttttt-aataagacgaacggtcaaacatgt 196
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
|||||||| |||| |||||||||||||| ||||||||
Sbjct: 197 gctaaaaaatcaatggtgtcaaacattttgaaacgga 233
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| ||||||||||| || |||| ||||| ||||||||||||||||||||||||
Sbjct: 233 tccgtttcaaaatgtttgacaccattgatttttta-gcacatgtttgaccgttcgtctta 175
Query: 77 ttcaaaa 83
|| ||||
Sbjct: 174 ttaaaaa 168
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 256 bits (129), Expect = 1e-67
Identities = 215/241 (89%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||||||| ||||| || |||||| || ||||||||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttaactttttaat-acgtgtttgaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||| ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 cgttttattcaaatcatttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||||||| | |||||| ||||||||||||||| || ||||||||||||||
Sbjct: 121 aaatatattttcatgtacacatatagttttacatatttcac-aatttttttgaataagat 179
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||| ||||
Sbjct: 180 gaacggtcaaatatgtgctaaaaaatcaacggtgtcgaacattttaaaacggaggaagta 239
Query: 250 c 250
|
Sbjct: 240 c 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 43 taaaaagttaacggtgtcaaacattttgaaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||| ||||||||| ||||||| ||| ||||||| ||||| |||||| ||||||||||
Sbjct: 239 tacttcctccgttttaaaatgttcgacaccgttgatttttta-gcacatatttgaccgtt 181
Query: 70 cgtcttattcaaaaaa 85
| ||||||||||||||
Sbjct: 180 catcttattcaaaaaa 165
>RF01058;MIR806;AAAA02028059.1/772-1013 39946:Oryza sativa Indica
Group
Length = 242
Score = 254 bits (128), Expect = 5e-67
Identities = 208/231 (90%), Gaps = 4/231 (1%)
Strand = Plus / Plus
Query: 21 tttcgaaatgtttgacgccgttgacattt-taagcacatgtttgaccgttcgtcttattc 79
||||||||| ||||||||||||||| ||| ||| |||||||||||| ||||| |||||
Sbjct: 13 tttcgaaatatttgacgccgttgacttttgtaa--acatgtttgaccattcgttttattt 70
Query: 80 aaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatattt 139
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 71 aaaaaatttaagtaattattacatcttttcttatcatttgattcattgttaaatatattt 130
Query: 140 tcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaa 199
| ||| | ||||||||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct: 131 ttatgtaagcatataattttacatatttcacaaaagtttttgaataaaacgaacggtcaa 190
Query: 200 atatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
| || | | ||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 191 acatttacttaaaaagtcaacggtgttaaacatttcgaaacggagagagta 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| |||||||||||||||||| || |||||||| ||||||| | ||||||||||||
Sbjct: 242 atactctctccgtttcgaaatgtttaacaccgttgactttttaagtaaatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
|||| |||||||||||
Sbjct: 182 tcgttttattcaaaaa 167
>RF01058;MIR806;AP003350.3/33008-32769 39947:Oryza sativa Japonica
Group
Length = 240
Score = 252 bits (127), Expect = 2e-66
Identities = 209/235 (88%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
|||| ||||| |||| | ||||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 6 cctcagtttcaaaatatctgacgtcgttgacttttta-gcacatgtttgaccgtttgtct 64
Query: 75 tattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaata 134
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 65 tatttaaaaaatttaagtaattattaattcttttcctatcatttgatttattgttaagta 124
Query: 135 tattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacg 194
|||||| ||| |||||||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 125 tattttgatgtaggcatataattttacatattttataaaagtttttgaataagacgaagt 184
Query: 195 gttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|| ||| |||| ||||| |||||| ||||||||| |||| ||||||||| |||||
Sbjct: 185 gtcaaacatgtactaaacagtcaatggtgtcaaatattttgaaacggagagagta 239
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| |||| |||||| || ||||| |||| | ||||||||||| ||
Sbjct: 239 tactctctccgtttcaaaatatttgacaccattgactgttta-gtacatgtttgacactt 181
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacg 220
||||| ||||||| |||||| ||| |||||||||||||||||||
Sbjct: 74 tttttaaataagacaaacggtcaaacatgtgctaaaaagtcaacg 30
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 252 bits (127), Expect = 2e-66
Identities = 209/235 (88%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||| ||||||| |||| ||||| |||||||| ||||| |||||||||||| |
Sbjct: 1 atactccccccgtttcaaaatatttgaaaccgttgactgtttaat-acatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| |||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 60 ttgtcttatttaaaaagtttaagtaattatttattcttttcatatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 120 taaatatatttttatgcacatatataattttacatatttcacaaaaaattttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggag 243
||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 180 cgaatggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggag 234
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctt 75
||||||||| |||| |||||| |||||||| ||||| |||||| ||||||| ||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgacttttta-gcacatatttgaccattcgtctt 176
Query: 76 attcaaaa 83
||||||||
Sbjct: 175 attcaaaa 168
>RF01058;MIR806;AAAA02023212.1/740-981 39946:Oryza sativa Indica
Group
Length = 242
Score = 250 bits (126), Expect = 8e-66
Identities = 215/242 (88%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||| ||| ||||| ||||| |||| | | || |||||||||
Sbjct: 1 atactccctccatttcaaaatatttaacgccattgacctttttaa-atatatttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 60 tcgtcttatttaaaaaatttaagtagttattacatcttttcctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 120 taaatatatttttatgtaggcatatcattttacatatttcacaaaagtttttgaataaga 179
Query: 189 tgaacggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
||||||||||| |||| | |||||||||||||||| ||| |||| ||||||||||||
Sbjct: 180 cgaacggttaaacatgtacttaaaaagtcaacggtgccaactattttaaaacggagggag 239
Query: 248 ta 249
||
Sbjct: 240 ta 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||| ||| | |||||||| ||||||| |||||||| |||||
Sbjct: 242 atactccctccgttttaaaatagttggcaccgttgactttttaagtacatgtttaaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02028258.1/13016-13265 39946:Oryza sativa Indica
Group
Length = 250
Score = 250 bits (126), Expect = 8e-66
Identities = 198/218 (90%), Gaps = 3/218 (1%)
Strand = Plus / Plus
Query: 33 tgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagt 92
||||||||||||| ||||| || ||||||||||||||| ||||||||||||| ||||| |
Sbjct: 36 tgacgccgttgacttttta-gcgcatgtttgaccgttcatcttattcaaaaa-tttaaat 93
Query: 93 aattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcata 152
||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 94 aattattaattcttttc-tatcgtttgattcattgttaaatatatttttatgtaggcata 152
Query: 153 taattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaa 212
|||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||
Sbjct: 153 taattttacatatttcacgaaagtttttgaataagacgaacggtcaaatatatgctaaaa 212
Query: 213 agtcaacggtgtcaaacatttcgaaacggagggagtac 250
||| || ||||||||| |||| |||| ||||||||||
Sbjct: 213 agttaatggtgtcaaatattttgaaatagagggagtac 250
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
||||||||||||||||||||| ||| ||| |||||||||||||||| ||||
Sbjct: 86 tttttgaataagatgaacggtcaaacatgcgctaaaaagtcaacggcgtca 36
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||| |||| |||| |||||| || || || ||||| ||| || ||||||||||
Sbjct: 249 tactccctctatttcaaaatatttgacaccattaacttttta-gcatatatttgaccgtt 191
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 190 cgtcttattcaaaaa 176
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 248 bits (125), Expect = 3e-65
Identities = 173/189 (91%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 49 tgtttgaccattcgtcttatttaaaaaatttaagtaattatttgttcttttcatatcatt 108
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||| ||||||||| ||||||||| |||||| ||||| ||||||||||||| ||
Sbjct: 109 tgattcattattaaatatactttcatgcacacatatagttttatatatttcacaaaattt 168
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| |||
Sbjct: 169 tttgaataagacgaacggtcaaatatgtgctaaaaagtcaacagtgtcaaacattttgaa 228
Query: 238 acggaggga 246
|||||||||
Sbjct: 229 acggaggga 237
Score = 95.6 bits (48), Expect = 3e-19
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| ||||||||||| | |||||| ||||| |||||| |||||||||||||
Sbjct: 237 tccctccgtttcaaaatgtttgacactgttgacttttta-gcacatatttgaccgttcgt 179
Query: 73 cttattcaaaaaattt 88
||||||||||||||||
Sbjct: 178 cttattcaaaaaattt 163
>RF01058;MIR806;AAAA02031464.1/18598-18832 39946:Oryza sativa Indica
Group
Length = 235
Score = 248 bits (125), Expect = 3e-65
Identities = 176/193 (91%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| | ||||||||||||| |||||||||||||||||||||||| || | ||||||
Sbjct: 42 atgttttatcgttcgtcttatttaaaaaatttaagtaattattaattattcttatatcat 101
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||||||| ||| ||||||||||||||| |||| ||| ||||||
Sbjct: 102 ttgattcattgttaaatatatttttatgtaggcatataattttatatatctcataaaagt 161
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct: 162 ttttgaataagacgaacagtcaaaaatgtgctaaaaagtcaacggtgtcaaacatttcga 221
Query: 237 aacggagggagta 249
|| ||||||||||
Sbjct: 222 aatggagggagta 234
Score = 95.6 bits (48), Expect = 3e-19
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||||||||||||||| |||||||| |||| ||||||| |||||| ||
Sbjct: 235 atactccctccatttcgaaatgtttgacaccgttgac-tttttagcacatttttgactgt 177
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 176 tcgtcttattcaaaaa 161
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 248 bits (125), Expect = 3e-65
Identities = 191/213 (89%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| ||||||| || ||||||||| ||||||||||| ||||||
Sbjct: 17 aaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttatttaaaaaa 76
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 77 tttaattaattatttattcttttcatatcatttgattcattgttaaatatattttcatat 136
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 137 acacatatagttttacatatttcacaaaaaaaattgaataagacgaacggttaaacatgt 196
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaa 238
||||||| |||||||||||||||||||| ||||
Sbjct: 197 gctaaaatgtcaacggtgtcaaacattttgaaa 229
Score = 81.8 bits (41), Expect = 4e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgacatttta-gcacatgtttaaccgttcgtcttattca 171
Query: 81 a 81
|
Sbjct: 170 a 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacattt 233
||||||||||||||||||||||||||
Sbjct: 42 taaaaagtcaacggtgtcaaacattt 17
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 248 bits (125), Expect = 3e-65
Identities = 213/241 (88%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||| |||| ||||||| ||||||| |||| | | ||||||||||||
Sbjct: 1 atacttcctccgtttcaaaatatttgacgtcgttgacttttttaa-atatgtttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 60 tcgtcttattaaaaaaatttaagtaattattaattttttttctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||| ||| || ||| | |||||| ||||| ||||||| |||||||||| ||||||||
Sbjct: 120 taaaaatacttatatgtatacatatagttttatatatttcgcaaaagttttggaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 180 cgaacggttaaacatgtgctaaaaagtcaacggcgtcaaatatttagaaacggagggagt 239
Query: 249 a 249
|
Sbjct: 240 a 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| ||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 240 tactccctccgtttctaaatatttgacgccgttgac-tttttagcacatgtttaaccgtt 182
Query: 70 cgtcttattcaaaaa 84
|||||||||| ||||
Sbjct: 181 cgtcttattccaaaa 167
Score = 44.1 bits (22), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||| ||| || | |||||||||||| |||||| |||| |
Sbjct: 75 ttttttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatattttg 16
Query: 236 aaacggagggagta 249
||||||||| ||||
Sbjct: 15 aaacggaggaagta 2
>RF01058;MIR806;AAAA02026173.1/5859-5619 39946:Oryza sativa Indica
Group
Length = 241
Score = 246 bits (124), Expect = 1e-64
Identities = 206/232 (88%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 18 ccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttat 77
|||||||||||| |||||| ||||| | |||| | |||| ||||||| ||||||||||
Sbjct: 10 ccgtttcgaaatatttgacaccgttaatttttttaa-acatatttgaccattcgtcttat 68
Query: 78 tcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatat 137
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 69 ttaaaaaatttaagtaattattaattctttttctatcatttgattcattgttaaatatat 128
Query: 138 tttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggtt 197
||| ||| ||||||||||||||| |||||| |||||| ||| ||||||| ||| |||
Sbjct: 129 ttttatgtaggcatataattttatatattttacaaaaaaatttaaataagacgaatggtc 188
Query: 198 aaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||| ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 189 aaatatgtactaaaaaatcaacagtgtcaaacatttcgaaacggagggagta 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||||||||||||||| | ||||| |||| || |||| ||||||| |
Sbjct: 241 atactccctccgtttcgaaatgtttgacactgttga-ttttttagtacatatttgaccat 183
Query: 69 tcgtcttatt 78
||||||||||
Sbjct: 182 tcgtcttatt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||| ||| |||||||| ||||| | |||||||||||| ||||||
Sbjct: 75 tttttaaataagacgaatggtcaaatatgtttaaaaaaattaacggtgtcaaatatttcg 16
Query: 236 aaacggagggagtac 250
|||||| | ||||||
Sbjct: 15 aaacggggcgagtac 1
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 246 bits (124), Expect = 1e-64
Identities = 176/192 (91%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||
Sbjct: 53 tgtttgaccattcgtcttattcaaaaaatttaagtcattatttattcttttcatatcatt 112
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 113 tgattcatttttaaatatactttcatgcacacatatagttttacatatttcacaaaa-tt 171
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||
Sbjct: 172 ttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgtcaaacattttgaa 231
Query: 238 acggagggagta 249
||||| ||||||
Sbjct: 232 acggatggagta 243
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| |||||||| ||||||||||| ||||| || ||||| |||||| |||||||||
Sbjct: 244 atactccatccgtttcaaaatgtttgacaccgttaacttttta-gcacatatttgaccgt 186
Query: 69 tcgtcttattcaaaaa 84
|||||||||| |||||
Sbjct: 185 tcgtcttattaaaaaa 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 207 ctaaaaagtcaacggtgtcaaacattt 233
|||||||||||||||||||||||||||
Sbjct: 37 ctaaaaagtcaacggtgtcaaacattt 11
>RF01062;MIR812;AAAA02007626.1/5051-5223 39946:Oryza sativa Indica
Group
Length = 173
Score = 244 bits (123), Expect = 5e-64
Identities = 150/159 (94%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 170 tttttagcacatgtttgaccgttcgtcttattcaaaaattttaagtagttattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 110 ttcctatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||||||||||||| ||| ||||||||||| ||||
Sbjct: 50 taacaaaagtttttgaatgagacgaacggttaaacatgt 12
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 133 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||| ||||||||||| |||||||||
Sbjct: 12 acatgtttaaccgttcgtctcattcaaaaa 41
>RF01062;MIR812;AP003313.3/97401-97573 39947:Oryza sativa Japonica
Group
Length = 173
Score = 244 bits (123), Expect = 5e-64
Identities = 153/163 (93%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctat 113
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 163 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattatttcttttcctat 104
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
||||||||||||||||||||||||||| || || |||||||||||| |||| |||||||
Sbjct: 103 catttgattcattgttaaatatatttttatatagacatataattttatatatctcacaaa 44
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 43 agtttttgaataagacgaacgattaaacatgtgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||| | |||||||||||||||||||
Sbjct: 4 tttttagcacatgtttaatcgttcgtcttattcaaaaa 41
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| ||||| |||||||||
Sbjct: 133 tttttgaataagacgaacggtcaaacatgtgataaaaagtc 173
>RF01058;MIR806;AP004015.3/68995-68755 39947:Oryza sativa Japonica
Group
Length = 241
Score = 244 bits (123), Expect = 5e-64
Identities = 208/235 (88%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||| ||||| |||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 5 tccctctgtttctaaatatttgacgccgttgactttttaaa-acatgtttgaccgttcgt 63
Query: 73 cttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaa 132
|||||||||||| ||||||||||| ||||| ||||| ||||||||| ||||||| |||||
Sbjct: 64 cttattcaaaaattttaagtaattgttaatactttttctatcatttaattcattattaaa 123
Query: 133 tatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaa 192
|||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tatacttttatatatacatataattttacatatttcacaaaagtttttgaataagatgaa 183
Query: 193 cggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
||| ||| || ||||||||||||||| ||||||| |||| |||| ||||||||
Sbjct: 184 tggtcaaacatatgctaaaaagtcaacattgtcaaatatttagaaatggagggag 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| |||| |||||||||||||| |||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgttttaaaaagtcaacggcgtcaaatatttag 16
Query: 236 aaacggaggga 246
|||| ||||||
Sbjct: 15 aaacagaggga 5
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
|||||||| |||| |||| |||||| |||||| ||||| ||| |||||||||| |||
Sbjct: 238 ctccctccatttctaaatatttgacaatgttgacttttta-gcatatgtttgaccattca 180
Query: 72 tcttattcaaaaa 84
|||||||||||||
Sbjct: 179 tcttattcaaaaa 167
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 244 bits (123), Expect = 5e-64
Identities = 213/241 (88%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| ||| |||||||| |||||| ||||||||| ||||||||| ||
Sbjct: 2 tactctctccgtttctaaaaatttgacgctgttgactttttaagca--tgtttgaccatt 59
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgttttattaaaaaaat--aagtaattattaattcttttcctatcatttgattcattgtt 117
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| |||||| || |||||| ||||||||||||||||| ||||||||||| |
Sbjct: 118 aaatatactttcatatagacatatagttttacatatttcacaattttttttgaataacac 177
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| ||| |||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 178 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttagaaatggcgggagta 237
Query: 250 c 250
|
Sbjct: 238 c 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||| || |||| ||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 237 tactcccgccatttctaaatgtttgacaccgttgacttttta-gcacatgtttgaccgtt 179
Query: 70 cgtcttattcaaaaaa 85
||| ||||||||||||
Sbjct: 178 cgtgttattcaaaaaa 163
>RF01058;MIR806;AP008208.1/31673629-31673391 39947:Oryza sativa
Japonica Group
Length = 239
Score = 242 bits (122), Expect = 2e-63
Identities = 202/226 (89%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| ||||||| | ||||||| || ||||| || ||||| ||| |||||||||| |
Sbjct: 1 atactccatccgttttggaatgtttaacaccgttaacttttta-gcatatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 60 tcgttttatttaaaaaatttaagtaattattaattcttttcctatcatttgatttattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | ||||||||||||| ||||||||||||| ||||| |||||||
Sbjct: 120 taaatatatttttatgtaagcatataattttatatatttcacaaaaattttt-aataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
||||||||||| ||| | |||||| ||||||||||||||||||||
Sbjct: 179 cgaacggttaaacatgggttaaaaaatcaacggtgtcaaacatttc 224
Score = 54.0 bits (27), Expect = 1e-06
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 25 gaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||||||||||| ||||||| |||||| | ||||||| ||||||||||||||| ||||
Sbjct: 224 gaaatgtttgacaccgttgattttttaacc-catgtttaaccgttcgtcttattaaaaa 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||| | ||| ||| ||| || ||||||||||| |||||||| ||||||| |
Sbjct: 75 tttttaaataaaacgaatggtcaaacatatgctaaaaagttaacggtgttaaacattcca 16
Query: 236 aaacggagggagta 249
||||||| ||||||
Sbjct: 15 aaacggatggagta 2
>RF01058;MIR806;AP008207.1/41268949-41269190 39947:Oryza sativa
Japonica Group
Length = 242
Score = 242 bits (122), Expect = 2e-63
Identities = 177/194 (91%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcct-atca 115
|||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||
Sbjct: 48 atgtttgaccgttcgtcttattaaaaaaatttaaataattattaattcttttttttatca 107
Query: 116 tttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag 175
||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||
Sbjct: 108 ttttattcattgttaaatatatttttatgtatacatatagttttacatatttcacaaaag 167
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |||| |
Sbjct: 168 tttttaaataagatgaacggttaagtatgtgctaaaaagtcaacaatgtcaaatatttag 227
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 228 aaacggagggagta 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||| |||| ||||||| || |||||
Sbjct: 242 atactccctccgtttctaaatatttgacattgttgac-tttttagcacatacttaaccgt 184
Query: 69 tcgtcttattcaaaaa 84
|| ||||||| |||||
Sbjct: 183 tcatcttatttaaaaa 168
>RF01062;MIR812;AACV01018980.1/6565-6395 39947:Oryza sativa Japonica
Group
Length = 171
Score = 240 bits (121), Expect = 8e-63
Identities = 154/164 (93%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 53 gcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttccta 112
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 gcacatgtttgaccgtttgtcttattcaaaaaatttaagtaattattaatttttttccta 103
Query: 113 tcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaa 172
|||||||||||||||||||||||||||| || || ||||||||||||||||||| | ||
Sbjct: 102 tcatttgattcattgttaaatatatttttat--agacatataattttacatattttataa 45
Query: 173 aagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 44 aagtttttgaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 4 tttttagcacatatttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AL731756.4/3482-3656 4530:Oryza sativa (rice)
Length = 175
Score = 240 bits (121), Expect = 8e-63
Identities = 154/164 (93%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaattt--aagtaattattaattcttttccta 112
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 164 acatgtttgaccgttcgtcttattcaaaaattttttaagtaattattaattcttttccta 105
Query: 113 tcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaa 172
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 104 tcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcacaa 45
Query: 173 aagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||| |||||| ||| || ||||||||||||
Sbjct: 44 aagtttttgaataagacgaacggccaaacatatgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||| ||||||| ||||||||||||||||||||
Sbjct: 4 tttttagcatatgtttggccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AC091665.3/17500-17326 4530:Oryza sativa (rice)
Length = 175
Score = 240 bits (121), Expect = 8e-63
Identities = 160/172 (93%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattat--taattc 104
|||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 172 tttttagcacatgtttgaccgtttgtcttattcaaaaaatttaagtaattatattaatta 113
Query: 105 ttttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacata 164
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 112 ttttcctatcatttgattcattgttaaatatatttttatgtaggcatataattttacata 53
Query: 165 tttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||| |||||||||||||||||||| ||||||| ||| || ||||||||||||
Sbjct: 52 ttttacaaaagtttttgaataagacgaacggtcaaacatatgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||| ||||||||||||||||||||||||||||
Sbjct: 4 tttttagcatatgtttgaccgttcgtcttattcaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaa 213
||||||||||||| |||||| ||| ||||||||||||
Sbjct: 135 tttttgaataagacaaacggtcaaacatgtgctaaaaa 172
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 240 bits (121), Expect = 8e-63
Identities = 207/233 (88%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| |||||| |||||||| ||||| |||| ||||||||| |||||||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgacttttta-gcacgtgtttgaccattcgtctta 67
Query: 77 ttcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatata 136
||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||
Sbjct: 68 ttcaaaaaatttaagtaattatttattcttttcatctcatctgattcattgttaaatata 127
Query: 137 ttttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggt 196
|||||||| | |||||| ||||||||||||||| || ||||| | ||||||||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcac-aatttttttaactaagatgaatggt 186
Query: 197 taaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| || ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 187 caaacatatgctaaaaagtcaacggcgtcaaacattttgaaacggagggagta 239
Score = 81.8 bits (41), Expect = 4e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||| |
Sbjct: 240 atactccctccgtttcaaaatgtttgacgccgttgac-tttttagcatatgtttgaccat 182
Query: 69 tcgtcttattcaaaaaa 85
|| ||||| | ||||||
Sbjct: 181 tcatcttagttaaaaaa 165
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||| ||| ||| | ||||||||||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaatattttg 16
Query: 236 aaacgga 242
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 240 bits (121), Expect = 8e-63
Identities = 212/241 (87%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||| ||||||| |||||||||||| |||| || |||| |||||||||| ||
Sbjct: 1 atactccccccgtttctaaatgtttgacgtcgttaacttttttta-acatgtttgattgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 60 tcgtcttattaaaaacatttaagtaattattaattcctttcatatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| || | |||| |||||||||||| ||||||||||||||||||||
Sbjct: 120 taaatatatttttatgtagacgtatagttttacatattttacaaaagtttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||| ||| ||| || |||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 180 cgaatggtcaaacatatgctaaaaagtcaacggtgtcaaatatttagaaacggatggagt 239
Query: 249 a 249
|
Sbjct: 240 a 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||| |||||||| |||| |||||| |||||||| ||||| ||| |||||||||| ||
Sbjct: 240 tactccatccgtttctaaatatttgacaccgttgacttttta-gcatatgtttgaccatt 182
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02026266.1/11676-11438 39946:Oryza sativa Indica
Group
Length = 239
Score = 238 bits (120), Expect = 3e-62
Identities = 209/236 (88%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||||||||| |||||| || |||| | ||||||||| ||||
Sbjct: 1 atactccctccgtttcaaaatgtttgatgccgttaacttttttaa-acatgtttgtccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 60 tcgtcttattcaaaaattttaagtaattattaattattttcctatcatttgattcattat 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||| ||| | ||| |||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 120 taaatacattcttatgtaggcatataattttacatatttcataaaagtttttaaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||||| ||| || | |||||||||||||||||| || |||| ||||||||||
Sbjct: 180 caaacggtcaaacatatagtaaaaagtcaacggtgtc-aatattttgaaacggagg 234
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| |||||| ||| |||| ||||||| ||||| |||||||||| |
Sbjct: 75 tttttgaataagacgaacggacaaacatgtttaaaaaagttaacggcatcaaacattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AC105319.2/92146-92389 39947:Oryza sativa Japonica
Group
Length = 244
Score = 238 bits (120), Expect = 3e-62
Identities = 207/235 (88%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| ||||| |||| | ||||||| ||||||||| |||||| |||||| ||
Sbjct: 5 tccctccgtttcaaaatgcttgaagacgttgactttttaagcatatgtttaaccgtttgt 64
Query: 73 cttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaa 132
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 cttattaaaaaaatttaagtaattattaattctttttctatcatttgattcattgttaaa 124
Query: 133 tatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaa 192
|||||||| ||| || | |||||||||||||||| | |||||||||||||||||| |||
Sbjct: 125 tatatttttatgtag--acataattttacatattttataaaagtttttgaataagacgaa 182
Query: 193 cggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| | ||| ||||||||||| |||||||||| ||| ||||||||| |||||||
Sbjct: 183 tgatcaaacgtgtgctaaaaaatcaacggtgttaaatatttcgaaattgagggag 237
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
||||||| ||||||||| ||| || ||||||| ||||| ||||| |||||| | ||||
Sbjct: 237 ctccctcaatttcgaaatatttaacaccgttgatttttta-gcacacgtttgatcattcg 179
Query: 72 tcttattcaaaaa 84
|||||||||||||
Sbjct: 178 tcttattcaaaaa 166
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||| ||||||| |||||||||| || |||| |||||||||||| |||| |||||
Sbjct: 76 ttttttaataagacaaacggttaaacatatgcttaaaaagtcaacgtcttcaagcatttt 17
Query: 235 gaaacggaggga 246
||||||||||||
Sbjct: 16 gaaacggaggga 5
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 238 bits (120), Expect = 3e-62
Identities = 211/240 (87%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||| |||| |||||| |||||||| ||||||| || ||| ||| | ||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcatt 61
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 121
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||||| | ||||| |||||||||||| | ||| ||||| ||||||
Sbjct: 122 aaatatactttcatgtacatatatagttttacatatttta-taaatttttttaataagtc 180
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagagagta 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 240 tactctctccgtttcaaaatgtttgacaccgttgacttttta-gcacatgtttgaccgtt 182
Query: 70 cgtcttattcaaaaaattta 89
|| |||||| ||||||||||
Sbjct: 181 cgacttattaaaaaaattta 162
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaatattttaaaacggagggagtac 1
>RF01062;MIR812;AP008218.1/26265074-26264902 39947:Oryza sativa
Japonica Group
Length = 173
Score = 236 bits (119), Expect = 1e-61
Identities = 152/163 (93%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctat 113
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cacatgtttgaccattcgccttattcaaaaaatttaagtaattattaattcttttcctat 104
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
|||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||||||
Sbjct: 103 catttgattcgttgttaaatatatttttatgtaggcatataattttacatatctcacaaa 44
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
| ||||||||||||| ||||| | ||| |||||||||||||||
Sbjct: 43 attttttgaataagacgaacgatcaaacatgtgctaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaattt 88
|||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgatcgttcgtcttattcaaaaaattt 45
>RF01058;MIR806;AAAA02022756.1/988-749 39946:Oryza sativa Indica
Group
Length = 240
Score = 236 bits (119), Expect = 1e-61
Identities = 168/183 (91%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 68 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 57 ttcgtcttatttaaaaaatttaagtaattattaattctttttctatcatttgattcattg 116
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 117 ttaaatatatttttatgtaggcatataattttatatatttcacaaaagtttttaaataag 176
Query: 188 atgaacggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
|||| ||| | | |||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 177 atgattggtcagacatgtgcttaaaaagttaacggtgtcaaacattttaaaacggaggga 236
Query: 247 gta 249
|||
Sbjct: 237 gta 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 240 atactccctccgttttaaaatgtttgacaccgttaactttttaagcacatgtctgaccaa 181
Query: 69 tcgtcttattcaaaaa 84
|| ||||||| |||||
Sbjct: 180 tcatcttatttaaaaa 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 224 tcaaacatttcgaaacggagggagtac 250
||||| |||||||||||||||||||||
Sbjct: 27 tcaaatatttcgaaacggagggagtac 1
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 210/238 (88%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||||||||||||||| |||||||| ||||||| | |||||||||||||||
Sbjct: 5 tccctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgt 64
Query: 73 cttattcaaaaaat-ttaagtaattattaattcttttcctatcatttgattcattgttaa 131
|||||| |||||| ||||||||||||| ||| ||||| |||||||| ||| || |||||
Sbjct: 65 cttatttaaaaaaagttaagtaattatttatttttttcatatcatttaattaatcgttaa 124
Query: 132 atatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatga 191
||| | ||||||| | |||||| |||||||||||||||||| ||||| ||||||| ||
Sbjct: 125 ataaactttcatgtacacatatagttttacatatttcacaaa--ttttttaataagaaga 182
Query: 192 acggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 183 acggtcaaacatgtgctaaaaagtcaacggagtcaaacattttgaaacggagggagta 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgactccgttgac-tttttagcacatgtttgaccgtt 182
Query: 70 cgtcttattcaaaaa 84
| ||||||| |||||
Sbjct: 181 cttcttattaaaaaa 167
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaacatttcgaaacggaggga 5
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 236 bits (119), Expect = 1e-61
Identities = 182/203 (89%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
||||||| || ||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 41 ttttaagtacgtgtttgaccattcgtcttattcaaaaaatttaattaattatttattctt 100
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||| |||||||||||||||||||||||||| ||||||| | |||||| |||||||||||
Sbjct: 101 ttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttacatatt 160
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
||| || ||||||||||||| ||||||| ||| ||||| ||||||||||||||||||
Sbjct: 161 tcataattttttttgaataagacgaacggtcaaacatgtgttaaaaagtcaacggtgtcg 220
Query: 227 aacatttcgaaacggagggagta 249
||||||| |||||||||||||||
Sbjct: 221 aacattttgaaacggagggagta 243
Score = 105 bits (53), Expect = 3e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||| ||| |||||||| |||||| |||||||||||||||
Sbjct: 244 atactccctccgtttcaaaatgttcgacaccgttgactttttaa-cacatgtttgaccgt 186
Query: 69 tcgtcttattcaaaaaa 85
|||||||||||||||||
Sbjct: 185 tcgtcttattcaaaaaa 169
>RF01062;MIR812;AP002842.3/89871-89700 39947:Oryza sativa Japonica
Group
Length = 172
Score = 234 bits (118), Expect = 5e-61
Identities = 158/170 (92%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 169 tttttagcacatatttaaccgtttgtcttatttaaaaaatttaagtaattattaattctt 110
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 109 tttctatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatt 50
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||| |||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 49 tcataaaagttttt-aataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagt 215
||||| ||||||| |||||||||||||||||||||||||
Sbjct: 132 tttttaaataagacaaacggttaaatatgtgctaaaaagt 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||| ||||||| ||||||||||||||||||| ||||
Sbjct: 4 tttttagcacatatttgaccgttcgtcttattaaaaa 40
>RF01062;MIR812;AP008218.1/21831476-21831647 39947:Oryza sativa
Japonica Group
Length = 172
Score = 234 bits (118), Expect = 5e-61
Identities = 158/170 (92%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 169 tttttagcacatatttaaccgttcgtcttattcaaaaa-tttaaataattattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 110 ttcctatcatttgattcattgttaaatatattttcatgtaggcatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||| ||||||| ||||||| ||| |||| ||||| ||||
Sbjct: 50 tcacaaaagtttttaaataagacgaacggtcaaacatgtactaaatagtc 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132 tttttgaataagacgaacggttaaatatgtgctaaaaagtc 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||||| |||||
Sbjct: 12 acatgtttgaccgttcgtcttatttaaaaa 41
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 234 bits (118), Expect = 5e-61
Identities = 175/193 (90%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||||||| |||||||| ||||||| || ||||||| | ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcatt 61
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaatttaaataattatttattcttttcatatcatttgattcattgtt 121
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||| ||| | |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 122 aaatatactttaatgta--catatagttttacatatttcacaaaattttttgaataagac 179
Query: 190 gaacggttaaata 202
|||||||||||||
Sbjct: 180 gaacggttaaata 192
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 64 accgttcgtcttattcaaaaaattt 88
|||||||||||||||||||||||||
Sbjct: 186 accgttcgtcttattcaaaaaattt 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgac 36
||||||||||||||| |||||||||||
Sbjct: 227 tactccctccgtttcaaaatgtttgac 201
>RF01058;MIR806;AP008209.1/33469259-33469499 39947:Oryza sativa
Japonica Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 214/242 (88%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| |||||| | |||| |||||||||||||| |||| | | |||||||||| |
Sbjct: 1 atactccatccgttcccaaatatttgacgccgttgatttttttaa-atatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattctttt-cctatcatttgattcattg 127
|||||||||| |||||| | |||||| |||||||| |||| ||||| |||||||||||||
Sbjct: 60 tcgtcttattaaaaaaaat-aagtaactattaattttttttcctattatttgattcattg 118
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||| ||||||| | |||||| ||||||||||||||||||| ||||| ||||||
Sbjct: 119 ttaaatatactttcatgtatacatatagttttacatatttcacaaaattttttaaataag 178
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 179 acgaacggttaaatatgtgctaaaaagtcaatggtgtcaaacatttagaaacggagggag 238
Query: 248 ta 249
||
Sbjct: 239 ta 240
Score = 87.7 bits (44), Expect = 7e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| || ||||| |||| ||||||| ||| |||||
Sbjct: 241 atactccctccgtttctaaatgtttgacaccattgac-tttttagcacatatttaaccgt 183
Query: 69 tcgtcttattcaaaaaattt 88
|||||||||| |||||||||
Sbjct: 182 tcgtcttatttaaaaaattt 163
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 172/190 (90%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tttgaccatttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 110
Query: 120 attcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttt 179
||||||||||||||||| || ||| | | |||| ||||||||||| ||||||| ||||
Sbjct: 111 attcattgttaaatatacttatatgtatacgtatagttttacatattccacaaaaatttt 170
Query: 180 tgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 239
||||||||| ||||||| ||||||||| |||||||| |||||||||||| |||| |||||
Sbjct: 171 tgaataagacgaacggtcaaatatgtggtaaaaagttaacggtgtcaaatatttagaaac 230
Query: 240 ggagggagta 249
||||||||||
Sbjct: 231 ggagggagta 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||| ||||| || ||||| ||||| ||||||||||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttac-cacatatttgaccgtt 182
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
>RF01058;MIR806;AC120307.3/45731-45972 39947:Oryza sativa Japonica
Group
Length = 242
Score = 234 bits (118), Expect = 5e-61
Identities = 208/238 (87%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
||||||||||| | |||| |||||| |||||||| |||||| ||||| ||| ||||||||
Sbjct: 4 ctccctccgttactaaatatttgacaccgttgactttttaaacacatatttaaccgttcg 63
Query: 72 tcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaa 131
|||||||||||| ||||||||||||||||||||||| |||| |||| ||| ||||||||
Sbjct: 64 tcttattcaaaacgtttaagtaattattaattctttttctattatttaatttattgttaa 123
Query: 132 atatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatga 191
||||| || ||| | || |||||||||||||||| | |||| |||||||||||| ||
Sbjct: 124 atatacttatatgtatacaaataattttacatattttataaaatcttttgaataagacga 183
Query: 192 acggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| ||||||||||||||||||||||| ||||||| |||| |||||||||||||||
Sbjct: 184 acggtcaaatatgtgctaaaaagtcaacgatgtcaaatatttagaaacggagggagta 241
Score = 87.7 bits (44), Expect = 7e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 177 ttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttcg 235
|||||||||||| ||||||||||||||||| | |||||||||||||||||||| |||| |
Sbjct: 75 ttttgaataagacgaacggttaaatatgtgtttaaaaagtcaacggtgtcaaatatttag 16
Query: 236 aaacggagggag 247
|||||||||||
Sbjct: 15 taacggagggag 4
Score = 87.7 bits (44), Expect = 7e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| ||||||| ||||| |||||| |||||||||
Sbjct: 242 atactccctccgtttctaaatatttgacatcgttgacttttta-gcacatatttgaccgt 184
Query: 69 tcgtcttattcaaaaaattt 88
||||||||||||||| ||||
Sbjct: 183 tcgtcttattcaaaagattt 164
>RF01062;MIR812;AAAA02007971.1/18863-18698 39946:Oryza sativa Indica
Group
Length = 166
Score = 232 bits (117), Expect = 2e-60
Identities = 138/145 (95%)
Strand = Plus / Minus
Query: 52 agcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcct 111
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 165 agcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcgtttcct 106
Query: 112 atcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttcaca 171
|| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 105 attatttgattcattgttaaatatatttttatataggcatataattttacatatttcaca 46
Query: 172 aaagtttttgaataagatgaacggt 196
|||| |||||||||||| |||||||
Sbjct: 45 aaagcttttgaataagacgaacggt 21
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaa 83
|||||||||||||||||||||||||||
Sbjct: 14 atgtttgaccgttcgtcttattcaaaa 40
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgcta 209
||||||||||||| ||||||| ||| ||||||||
Sbjct: 133 tttttgaataagacgaacggtcaaacatgtgcta 166
>RF01062;MIR812;AAAA02022500.1/39522-39353 39946:Oryza sativa Indica
Group
Length = 170
Score = 232 bits (117), Expect = 2e-60
Identities = 154/165 (93%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 52 agcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcct 111
||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||
Sbjct: 164 agcacatgtttgaccgttcgtcttattaaaaaaatt-aagtaattattaattattttcct 106
Query: 112 atcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttcaca 171
|||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||
Sbjct: 105 atcatttgattcattgttaaatatatttctatgtagatatataatttttcatatttcaca 46
Query: 172 aaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 45 aaagtttttgaataagacgaacggttaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttaaccgttcgtcttattcaaaaa 41
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 232 bits (117), Expect = 2e-60
Identities = 199/225 (88%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| |||| ||||||||||||||| |||||| | |||||||||||||||||||||| |
Sbjct: 13 tttctaaatatttgacgccgttgactttttaaa-atatgtttgaccgttcgtcttattta 71
Query: 81 aaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttt 140
|||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||
Sbjct: 72 aaaattttaagtaattattaattattttcctatcatttgattcattattaaatatactta 131
Query: 141 catgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaa 200
||| | | |||| ||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 132 tatgtatacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaa 191
Query: 201 tatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggg 245
||||||||||| ||||||||| | ||| |||| |||||||||||
Sbjct: 192 catgtgctaaaatgtcaacggtattaaatatttagaaacggaggg 236
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| |||| ||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 236 ccctccgtttctaaatatttaataccgttgacatttta-gcacatgtttgaccgttcgtc 178
Query: 74 ttattcaaaaa 84
|||||||||||
Sbjct: 177 ttattcaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||| ||| || | |||||||||||||| |||||| |||| |
Sbjct: 75 tttttaaataagacgaacggtcaaacatattttaaaaagtcaacggcgtcaaatatttag 16
Query: 236 aaa 238
|||
Sbjct: 15 aaa 13
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 171/189 (90%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 45 acatgattgaccattcgtcttattcaaaaaatttaagtaattattaatttttttcctatc 104
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||| ||||||||| ||| || |||||| ||||| |||||||||||||
Sbjct: 105 atttgattcattgttatatatatttttatgtagacatatagttttatatatttcacaaaa 164
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
| |||| || |||| ||||||| ||| ||||||||||||||||| ||||||||| ||||
Sbjct: 165 gcttttaaaaaagacgaacggtcaaacatgtgctaaaaagtcaatggtgtcaaatattta 224
Query: 235 gaaacggag 243
|||||||||
Sbjct: 225 gaaacggag 233
Score = 63.9 bits (32), Expect = 1e-09
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctt 75
||||||||| |||| |||||| || ||||| ||||| |||||||||||||||||||||||
Sbjct: 233 ctccgtttctaaatatttgacaccattgacttttta-gcacatgtttgaccgttcgtctt 175
>RF01058;MIR806;AP008218.1/24274484-24274243 39947:Oryza sativa
Japonica Group
Length = 242
Score = 232 bits (117), Expect = 2e-60
Identities = 168/185 (90%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tgtttgaccgttcgtattattcaaaaaatttaagtaattattaattcttttcctatcatt 109
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||||||||||||| || ||| | |||||| ||||| ||||||||||||||||
Sbjct: 110 tgattcattgttaaatatacttatatgtatacatatagttttagatatttcacaaaagtt 169
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
|| |||||||| ||| ||| ||| ||||||||||||||||||||| ||||| |||| |||
Sbjct: 170 ttcgaataagaggaatggtcaaacatgtgctaaaaagtcaacggtatcaaatatttagaa 229
Query: 238 acgga 242
|||||
Sbjct: 230 acgga 234
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| ||||| |||||||| ||||| |||||||||||||| ||| |||||
Sbjct: 234 tccgtttctaaatatttgataccgttgacttttta-gcacatgtttgaccattcctctta 176
Query: 77 ttcaaaaa 84
||| ||||
Sbjct: 175 ttcgaaaa 168
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 212/241 (87%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| || || ||||||||| |||| | ||||||||||||||
Sbjct: 1 atactccctccgtttctaaatattcgatgccgttgacttttttaa-acatgtttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||||||||| ||||| ||| ||||| || ||||||||||||||||||||||||
Sbjct: 60 tcgtcttattcaaaaattttaaataagtattattt-ttttcctatcatttgattcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | |||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 119 taaatatacttttatgtatacatatagttttatatatttcacaaaaatttttgaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
|||| ||| ||| |||||||||||||| |||||||| ||| |||| |||||||||| |||
Sbjct: 179 tgaatggtcaaacatgtgctaaaaagttaacggtgtaaaatatttagaaacggaggaagt 238
Query: 249 a 249
|
Sbjct: 239 a 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||| |||| ||| || ||||| || ||||| |||||||||||||| |
Sbjct: 240 atacttcctccgtttctaaatattttacaccgttaacttttta-gcacatgtttgaccat 182
Query: 69 tcgtcttattcaaaaa 84
|| |||||||||||||
Sbjct: 181 tcatcttattcaaaaa 166
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| |||| ||||||||||||| || || |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcgaatatttag 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01062;MIR812;AC105731.2/81448-81276 39947:Oryza sativa Japonica
Group
Length = 173
Score = 230 bits (116), Expect = 8e-60
Identities = 150/160 (93%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa-tttaagtaattattaattct 105
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 169 tttttagcacatgtttgaccgttcgtcttattcaaaaaaatttaagtaattattaattcg 110
Query: 106 tttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatat 165
|||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 109 tttcctattatttgattcattgttaaatatatttttatgtaggcatataattttatatat 50
Query: 166 ttcacaaaagtttttgaataagatgaacggttaaatatgt 205
||||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 49 ttcacaaaagtttttgaataagacgaacggtcaaacatgt 10
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||||||||||||||
Sbjct: 10 acatgtttgaccgttcgtcttattcaaaaa 39
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtca 217
||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 132 tttttgaataagacgaacggtcaaacatgtgctaaaaagtca 173
>RF01062;MIR812;AP008218.1/26137424-26137593 39947:Oryza sativa
Japonica Group
Length = 170
Score = 230 bits (116), Expect = 8e-60
Identities = 157/170 (92%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 167 tttttagcacatgtttgactgttcgtcttatttaaaaaatttaagtaattattaattctt 108
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 107 ttc---tcatttgattcattgttaaatatatttccatgtaggcatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||| ||||||||| ||||||| ||| |||| ||||||||||
Sbjct: 50 tcacaaaagtttctgaataagacgaacggtcaaacatgtcctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattca 80
||||||||||||||||||||||||||
Sbjct: 12 acatgtttgaccgttcgtcttattca 37
>RF01058;MIR806;AACV01004906.1/16108-16348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 230 bits (116), Expect = 8e-60
Identities = 176/196 (89%)
Strand = Plus / Plus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctat 113
||||||||| |||| |||||||||||||||||||||| |||||||||||| | |||||||
Sbjct: 45 cacatgttttaccgctcgtcttattcaaaaaatttaaataattattaattttattcctat 104
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
|||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||
Sbjct: 105 tatttgattcattgttaaatatacttttatgcatacatatagttttacatatttcacaaa 164
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||||| || | || ||| ||||||||||||||||||||||||||| |
Sbjct: 165 agtttttgaataagacgagcagtcaaacatgtgctaaaaagtcaacggtgtcaaataaaa 224
Query: 234 cgaaacggagggagta 249
||||||||||||||||
Sbjct: 225 cgaaacggagggagta 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||| | |||||| |||||||| ||||| ||||||||||||| |
Sbjct: 241 atactccctccgtttcgttttatttgacaccgttgacttttta-gcacatgtttgactgc 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
>RF01062;MIR812;AAAA02034810.1/7626-7453 39946:Oryza sativa Indica
Group
Length = 174
Score = 228 bits (115), Expect = 3e-59
Identities = 149/159 (93%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 160 tgtttgaccgttcgtcttattcaaaaaatttaagtaattaataattcttttcttatcatt 101
Query: 118 tgattcattgttaaatata-ttttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||||||||||| |||| ||| ||| |||||||||||||||||| ||||||||
Sbjct: 100 tgattcattgttaaatatattttttatgtaggtatataattttacatattttacaaaagt 41
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagt 215
|||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 40 ttttgaataagacgaacggtcaaacatgtgctaaaaagt 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AACV01007440.1/7278-7447 39947:Oryza sativa Japonica
Group
Length = 170
Score = 228 bits (115), Expect = 3e-59
Identities = 158/170 (92%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 167 tttttagcacatgtttaaccgttcgtcttatttaaaaaatttaagtaattattaattctt 108
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct: 107 ttcctatcatttgattcattgttaaatatatttttatgtaggcatataa--ttacatatt 50
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||| ||||| |||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 49 tca-aaaaggtttttaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||| ||||||| ||||||||||| |||||||||||||||
Sbjct: 130 tttttaaataagacgaacggttaaacatgtgctaaaaagtc 170
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||| ||||||| ||||||||||||||||||| ||||
Sbjct: 4 tttttagcacatatttgaccgttcgtcttattaaaaa 40
>RF01062;MIR812;AP004705.3/25828-26000 39947:Oryza sativa Japonica
Group
Length = 173
Score = 228 bits (115), Expect = 3e-59
Identities = 159/171 (92%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 170 tttttagcatatgtttgaccattcgtcttattcaaaaaatttaagtaattattaattatt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 110 ttcctatcatttgattcattgttaaatatatttt-atgtagacatataattttacatatt 52
Query: 167 tcacaaaag-tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
| | ||||| ||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 51 ttataaaagttttttgaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||| ||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatatttgaccgttcgtcttattcaaaaaa 42
>RF01062;MIR812;AAAA02011042.1/14079-13908 39946:Oryza sativa Indica
Group
Length = 172
Score = 228 bits (115), Expect = 3e-59
Identities = 149/159 (93%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 159 atgtttgaccgttcgtcttattcaaaaaatttaaataattattaattcttttcctatcat 100
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||| |||||| ||||| ||| ||||||||||||||||||| ||||| ||||
Sbjct: 99 ttgattcattggtaaatacatttttatgtgggcatataattttacatatctcacacaagt 40
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagt 215
|||| ||||||| ||||||||||||||||||||||||||
Sbjct: 39 tttt-aataagacgaacggttaaatatgtgctaaaaagt 2
>RF01062;MIR812;AAAA02015240.1/4576-4749 39946:Oryza sativa Indica
Group
Length = 174
Score = 228 bits (115), Expect = 3e-59
Identities = 159/171 (92%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa-tttaagtaattattaattct 105
||||||||| |||||||||||||||||||||| |||||| ||||| || ||||||||| |
Sbjct: 170 ttttaagcatatgtttgaccgttcgtcttatttaaaaaaatttaaatagttattaatt-t 112
Query: 106 tttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatat 165
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 111 tttcctatcatttgattcattgttaaatatatttttatgtaggcatataattttacatat 52
Query: 166 ttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||| ||||||| ||||||| ||| |||||||||||||||
Sbjct: 51 ttcacaaaagtttttaaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||||||||||||||| |||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttatttaaaaa 41
>RF01058;MIR806;AACV01005659.1/15097-14857 39947:Oryza sativa
Japonica Group
Length = 241
Score = 228 bits (115), Expect = 3e-59
Identities = 181/203 (89%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 38 tttttagcacatgttttaccgctcgtcttattcaaaaaaattaaataattattaattctt 97
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||||||||||||||||| |||||||||||| ||| ||||| | |||| |||||||||||
Sbjct: 98 ttcctatcatttgattcgttgttaaatatacttttatgcatacgtatagttttacatatt 157
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
|||||||| ||||||||||||| ||||||| ||| ||||| |||||||||||||| ||||
Sbjct: 158 tcacaaaaatttttgaataagacgaacggtcaaacatgtgataaaaagtcaacggcgtca 217
Query: 227 aacatttcgaaacggagggagta 249
|| | ||||||||||||||||
Sbjct: 218 aataaaacgaaacggagggagta 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||
Sbjct: 240 tactccctccgtttcgttttatttgacgccgttgactttttat-cacatgtttgaccgtt 182
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaag 214
||||||||||||| || |||| ||| |||||||||||||
Sbjct: 75 tttttgaataagacgagcggtaaaacatgtgctaaaaag 37
>RF01062;MIR812;AL606690.3/103744-103915 39947:Oryza sativa Japonica
Group
Length = 172
Score = 226 bits (114), Expect = 1e-58
Identities = 157/170 (92%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 169 tttttagcacatgtttggctattcgtcttattcaaaaaatttaagtaattat-aattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|| ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 110 tttctatcatttaattcattgttaaatatatttttatgtaggcatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||||| | ||||||| ||| |||||||||||||||
Sbjct: 50 tcacaaaagtttttgaataaaacgaacggtcaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||||||||| |||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgttttattcaaaaa 41
>RF01062;MIR812;AP008209.1/24447242-24447070 39947:Oryza sativa
Japonica Group
Length = 173
Score = 226 bits (114), Expect = 1e-58
Identities = 156/170 (91%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 170 tttttagcatatgtttgaccgtttgtcttattcagaaaatttaagtaattattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|| |||| |||||||||| ||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 110 tttctattatttgattcactgttaaatatatttttatgtaggtatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||||||| ||||||| ||| || ||||||||||||
Sbjct: 50 tcacaaaagtttttgaataagacgaacggtcaaacatatgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||| ||||||||||||||||||||||||||||
Sbjct: 4 tttttagcatatgtttgaccgttcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 189/213 (88%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| ||||||| || ||||||| | ||||||||||||||||||
Sbjct: 19 aaatgtttgacaccgttgactttttaagtacgtgtttgaacattcgtcttattcaaaaaa 78
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||||||||||| |||||||| || |||||||||||||||||||||| |||||||
Sbjct: 79 tttaagtaattatttattctttttatacaatttgattcattgttaaatatactttcatgt 138
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| ||||||| |||||||||||||||||| |||| ||||||| ||||||||||| ||||
Sbjct: 139 acgcatatagttttacatatttcacaaa--ctttttaataagacgaacggttaaacatgt 196
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaa 238
||||||||||||||| | ||||| |||||||||
Sbjct: 197 gctaaaaagtcaacgttatcaaatatttcgaaa 229
Score = 56.0 bits (28), Expect = 3e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgttt-cgaaatgtttgacgccgttgacattttaagcacatgtttgaccg 67
||||||||| ||||| |||||| ||||| ||||||| ||||| |||||||||| ||||
Sbjct: 242 atactcccttcgttttcgaaatatttgataacgttgacttttta-gcacatgtttaaccg 184
Query: 68 ttcgtcttattcaaaa 83
||||||||||| ||||
Sbjct: 183 ttcgtcttattaaaaa 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacattt 233
||||||||||||||||||||||||||
Sbjct: 44 taaaaagtcaacggtgtcaaacattt 19
>RF01058;MIR806;AAAA02011807.1/37472-37231 39946:Oryza sativa Indica
Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 175/194 (90%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct: 48 atgtttgaccgttcgttttatttaaaaaaattaagtaattattaatttttttcctatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||| || ||| | ||||||||||||||||||||||||||||
Sbjct: 108 ttgatttattgttaaatatacttatatgtatacatataattttacatatttcacaaaagt 167
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg- 235
|||| ||||||| ||| | |||||||||||||||||||||||||||||||| |||| |
Sbjct: 168 ttttcaataagacaaacagctaaatatgtgctaaaaagtcaacggtgtcaaatatttaga 227
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 228 aaacggagggagta 241
>RF01058;MIR806;AP003911.3/90546-90311 39947:Oryza sativa Japonica
Group
Length = 236
Score = 226 bits (114), Expect = 1e-58
Identities = 169/186 (90%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 65 ccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattca 124
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 52 ccgttcatcttatttaaaaaatttaagtaatcattaattcttttcctatcatttgattta 111
Query: 125 ttgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaat 184
|||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| |||
Sbjct: 112 ttgttaaatatatttttatgtatacatatagttttacatatttcacaaaagttttt-aat 170
Query: 185 aagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||| ||| ||||||| |||||||||||||||||||| |||||| |||| || |||||||
Sbjct: 171 aagacgaatggttaaacatgtgctaaaaagtcaacggcgtcaaatatttagagacggagg 230
Query: 245 gagtac 250
||||||
Sbjct: 231 gagtac 236
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||| || |||| ||||||||||||||| |||| ||||||||||| ||| ||
Sbjct: 235 tactccctccgtctctaaatatttgacgccgttgac-tttttagcacatgtttaaccatt 177
Query: 70 cgtcttattcaaaa 83
||||||||| ||||
Sbjct: 176 cgtcttattaaaaa 163
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 226 bits (114), Expect = 1e-58
Identities = 156/170 (91%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 25 atgtttaaccgttcgtcttattcaaaaaaattaagtaattattaattcttttcctatcat 84
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|| ||||||||||||||||| || ||| | |||||| ||||| |||||||||||||||
Sbjct: 85 ttaattcattgttaaatatacttatatgtatacatatagttttatatatttcacaaaagt 144
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
|||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 145 ttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 194
Score = 71.9 bits (36), Expect = 4e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 33 tgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 194 tgacaccgttgacttttta-gcacatgtttgaccgttcgtcttattcaaaaa 144
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 226 bits (114), Expect = 1e-58
Identities = 208/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| |||||||| |||||||||| | |||||| ||||| | || ||||| | | ||
Sbjct: 2 tactctctccgttttaaaatgtttgatacagttgacttttta-gtacgtgtttaatcatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||| |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 61 cgttttattcaaaaaattaaagtaattatttattcttttcacatcatttgatttattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||||| | || ||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 121 aaatatactttcatgtacacaaatagttttacatatttcacaaaaatttttaaataagat 180
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 181 gaacggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagggag 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
||||||||||||| |||| |||||| |||||||| |||| ||||||| |||||||||||
Sbjct: 238 ctccctccgtttcaaaatatttgacaccgttgac-tttttagcacatatttgaccgttca 180
Query: 72 tcttattcaaaaa 84
||||||| |||||
Sbjct: 179 tcttatttaaaaa 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||| | ||| | ||||| | || ||||||||||||| || ||||||||||
Sbjct: 75 tttttgaataaaacgaatgattaaacacgtactaaaaagtcaactgtatcaaacatttta 16
Query: 236 aaacggagggagta 249
|||||||| |||||
Sbjct: 15 aaacggagagagta 2
>RF01058;MIR806;AC152969.1/99940-100170 39947:Oryza sativa Japonica
Group
Length = 231
Score = 226 bits (114), Expect = 1e-58
Identities = 190/214 (88%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||||||||||| |||| | | |||||||||||||||||||||||||||||
Sbjct: 12 aaatatttgacgccgttgacttttttaaaa-atgtttgaccgttcgtcttattcaaaaaa 70
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 71 tttaagtaattattaattcttttcgtatcatttgatttattgttaaatatactttcatgt 130
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||||| |||||| |||||||||| ||||| ||||||||| |||||| |
Sbjct: 131 atacatatagttttacacatttcataaaagtttttaaataaaatgaacggtcaaatatat 190
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaac 239
|||||||||||||||| |||||||| |||||
Sbjct: 191 ttaaaaaagtcaacggtgttaaacatttagaaac 224
Score = 44.1 bits (22), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||||||| ||| || | ||||||||||||| |||||| ||||
Sbjct: 69 tttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgtcaaatattt 12
>RF01058;MIR806;AACV01022117.1/107-349 39947:Oryza sativa Japonica
Group
Length = 243
Score = 226 bits (114), Expect = 1e-58
Identities = 208/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||| |||||| |||| |||||||| |||||| |||||| | |||||| ||| ||
Sbjct: 2 tactccctgcgtttctaaatatttgacgctgttgactttttaaaaatatgtttaaccatt 61
Query: 70 cgtcttattcaaaa-aatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 62 cgtcttattaaaaaaaatttaagtaatcattagttcttttcctatcatttgattcattgt 121
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | |||||| ||||||||||||||||||||||||||||||| |
Sbjct: 122 taaatatacttttatgtatacatatagttttacatatttcacaaaagtttttgaataaaa 181
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
||||||| ||| || |||||||||||||| || || ||| |||| ||||||||||||
Sbjct: 182 cgaacggtcaaacatctgctaaaaagtcaatggcgttaaatatttagaaacggaggga 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| |||| ||| ||||| ||||| ||||| ||| ||||||||||||||||
Sbjct: 239 tccctccgtttctaaatatttaacgccattgacttttta-gcagatgtttgaccgttcgt 181
Query: 73 cttattcaaaaa 84
|||||||||||
Sbjct: 180 tttattcaaaaa 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
|||||||||||| | |||||| |||| |||||| |||||||||
Sbjct: 43 taaaaagtcaacagcgtcaaatatttagaaacgcagggagtac 1
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 209/238 (87%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
||||||| |||| ||||||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 5 tccctccatttcaaaatgtttgacactattgacttttta-gcacatgtttgaccgttcgt 63
Query: 73 cttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaa 132
||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||
Sbjct: 64 cttattcaaaaaatttaagtaattatttattattttcatatcatttgattcattattaaa 123
Query: 133 tatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaa 192
|||| |||||| | |||||| |||||||||||||| |||| ||||||||||||| ||
Sbjct: 124 tatactttcatctacacatatagttttacatatttcataaaattttttgaataagacaaa 183
Query: 193 cggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| ||| |||| | ||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 184 tggtcaaacatgtacttaaaaagtcaacggtgtcaaatattttgaaacagagggagta 241
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||| ||||| |||| |||||| |||||||| ||||||| |||||||||||| ||
Sbjct: 241 tactccctctgtttcaaaatatttgacaccgttgactttttaagtacatgtttgaccatt 182
Query: 70 cgtcttattcaaaaaattt 88
||||||||||||||||||
Sbjct: 181 tgtcttattcaaaaaattt 163
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaatagtgtcaaacattttg 16
Query: 236 aaacggaggga 246
||| |||||||
Sbjct: 15 aaatggaggga 5
>RF01062;MIR812;AP008214.1/27178440-27178267 39947:Oryza sativa
Japonica Group
Length = 174
Score = 224 bits (113), Expect = 5e-58
Identities = 135/141 (95%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 161 atgtttgaccgttcgtcttattcaagaaatttaagtaattattaattcttttcctatcat 102
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaa-aag 175
|||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||
Sbjct: 101 ttgattcattgttaaatatatttttatgtaggcatataattttacatattttacaagaag 42
Query: 176 tttttgaataagatgaacggt 196
||||||||||||| |||||||
Sbjct: 41 tttttgaataagacgaacggt 21
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 56 catgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||||||||||
Sbjct: 13 catgtttgaccgttcgtcttattcaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 cctccgtttcgaaatgtttgac 36
||||||||||||||||||||||
Sbjct: 174 cctccgtttcgaaatgtttgac 153
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 223 gtcaaacatttcgaaacggagg 244
||||||||||||||||||||||
Sbjct: 153 gtcaaacatttcgaaacggagg 174
>RF01062;MIR812;ABRL01002071.1/2583-2756 65489:Oryza barthii
Length = 174
Score = 224 bits (113), Expect = 5e-58
Identities = 156/169 (92%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaat-ttaagtaattattaattct 105
|||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 171 tttttagcacatgtttgaccgttcgtcttatttaaaaaaaattaagtaattattaattct 112
Query: 106 tttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatat 165
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 111 tttcctatcatttgattcactgttaaatatattttcatgtaggcatataattttatatat 52
Query: 166 ttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaag 214
|||| |||| ||||||||||||| | ||||||||| || ||||||||||
Sbjct: 51 ttcataaaaatttttgaataagacgtacggttaaacatatgctaaaaag 3
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||| ||||||| ||||||| ||| |||||||||||||||
Sbjct: 134 tttttaaataagacgaacggtcaaacatgtgctaaaaagtc 174
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||| |||||| ||||| |||||||||||||||
Sbjct: 4 tttttagcatatgtttaaccgtacgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 224 bits (113), Expect = 5e-58
Identities = 199/225 (88%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| |||||| | |||||||||||||| ||| ||||||| ||
Sbjct: 18 aaatgtttgacaccgttgactttttaaa-atatgtttgaccgttcttctcattcaaacaa 76
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 77 tttaagtaactatttattctttttatatcatttgattcattgttaaatatactttcatgt 136
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| |||||||||||||| | | ||||| ||||||| |||||||||||||| |
Sbjct: 137 acccatatagttttacatatttca-tagatttttttaataagacgaacggttaaatatat 195
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
|||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 196 gctaaaaagtcaacggtgtcaaacattttgaaacggaaggagtac 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||| |||||||| ||||||||||| |||||||| |||| |||| || ||| ||||||
Sbjct: 239 tactccttccgtttcaaaatgtttgacaccgttgac-tttttagcatatatttaaccgtt 181
Query: 70 cgtcttattcaaaaaat 86
||||||||| |||||||
Sbjct: 180 cgtcttattaaaaaaat 164
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||| ||| ||||||| ||| || | ||||||||||||||||||||||||||
Sbjct: 73 tttgaatgagaagaacggtcaaacatattttaaaaagtcaacggtgtcaaacattt 18
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 224 bits (113), Expect = 5e-58
Identities = 211/241 (87%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||||||||| || |||||||| | |||||||| |
Sbjct: 1 atactccctccgtttctaaatgtttgacgccgttaac-ttttaagcgcgggtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| ||||||||||| |||||||| || |||| ||||||||||||||||||
Sbjct: 60 tcgtcttatttaaaaaatttaactaattattgatgactttcatatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | |||||| |||||||||||||| ||| ||||| |||||||
Sbjct: 120 taaatatactttcatgtacacatatagttttacatatttca-taaatttttttaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| |||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 179 cgaacggtcaaacatgtgctaaaaagttaatggtgtcaaacattttaaaacggagggagt 238
Query: 249 a 249
|
Sbjct: 239 a 239
Score = 87.7 bits (44), Expect = 7e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||| ||||||||||| || || || ||||| |||||||||||||||||
Sbjct: 239 tactccctccgttttaaaatgtttgacaccattaacttttta-gcacatgtttgaccgtt 181
Query: 70 cgtcttattcaaaaaattta 89
||||||||| ||||||||||
Sbjct: 180 cgtcttattaaaaaaattta 161
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 210 aaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 41 aaaagttaacggcgtcaaacatttagaaacggagggagta 2
>RF01058;MIR806;AAAA02023149.1/15566-15807 39946:Oryza sativa Indica
Group
Length = 242
Score = 224 bits (113), Expect = 5e-58
Identities = 167/185 (90%)
Strand = Plus / Plus
Query: 65 ccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattca 124
||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 57 ccgttcgtcttattcgcagaatttaagtaattatgaattcttttcctatcatttgattta 116
Query: 125 ttgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaat 184
|||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||| |||
Sbjct: 117 ttgttatatatatttttatgtaggcatataattttacatatttcacacaagtttttaaat 176
Query: 185 aagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||| | |||| ||||||||||||||||||| ||||||||| ||||||| ||||||| |
Sbjct: 177 aagacgcgcggtcaaatatgtgctaaaaagtctacggtgtcacacatttcaaaacggaag 236
Query: 245 gagta 249
|||||
Sbjct: 237 gagta 241
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 224 bits (113), Expect = 5e-58
Identities = 189/213 (88%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| |||||| |||||||||| | |
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttaat-acatgtttgatcat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattat 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||||| |||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 120 taaatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacgg 221
|||||| ||| ||||| |||||||| |||||
Sbjct: 180 caaacggtcaaacatgtgttaaaaagttaacgg 212
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||| | | ||| |||| ||||||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaatattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaattt 88
|||||||||||||||| ||||||||||||||||||
Sbjct: 197 cacatgtttgaccgtttgtcttattcaaaaaattt 163
>RF01058;MIR806;AC135925.2/160345-160105 39947:Oryza sativa Japonica
Group
Length = 241
Score = 224 bits (113), Expect = 5e-58
Identities = 199/225 (88%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| |||| ||||| ||||||||| |||| | |||||||||||||||||||
Sbjct: 5 ccctccgtttctaaatatttgatgccgttgacttttttaa-acatgtttgaccgttcgtc 63
Query: 74 ttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaat 133
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64 ttattcaaaaaatttaaataattattaattcttttcctatcatttgatttattgttaaat 123
Query: 134 atattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaac 193
||||||| ||| | |||||| ||||| |||||||| ||||||||||||||| || ||||
Sbjct: 124 atatttttatgtatacatatagttttatatatttcagaaaagtttttgaataggacgaac 183
Query: 194 ggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
||||||||||||||||||| ||| | |||||| |||| ||||
Sbjct: 184 -aataaatatgtgctaaaaagttaacagcgtcaaatatttagaaa 227
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| |||| ||||||||||||| ||||| |||| |
Sbjct: 74 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcaaatatttag 15
Query: 236 aaacggaggg 245
||||||||||
Sbjct: 14 aaacggaggg 5
>RF01062;MIR812;AAAA02004762.1/13257-13086 39946:Oryza sativa Indica
Group
Length = 172
Score = 222 bits (112), Expect = 2e-57
Identities = 149/160 (93%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 161 acatgtttgaccgttcgttttattcaaaaaatttaagtaattattaatttttttcctatc 102
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||| ||| ||||||||| ||| | ||||||||||||| |||||||||||||
Sbjct: 101 atttgattcattattatatatatttttatgta-gcatataattttatatatttcacaaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaag 214
|||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 42 gtttttgaataagacgaacggtcaaacatgtgctaaaaag 3
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 222 bits (112), Expect = 2e-57
Identities = 176/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||| | |||| ||||||| ||||||| |||||| |||||||||||||||
Sbjct: 2 tactccctccgttcctaaatatttgacgtcgttgac-ttttaaaaacatgtttgaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||| |||||| |||||||||| |||||||||||||||||| ||||||
Sbjct: 61 cgtcttattaaaaaaaattaagtgattattaatttttttcctatcatttgattaattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||| ||| | ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 aaatatacttttatgtatacatataattttacatattttacaaaagtttttgaataagac 180
Query: 190 gaacggttaaatatgt 205
||||||||||| ||||
Sbjct: 181 gaacggttaaacatgt 196
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||| ||| |||| | ||||||||||| |||||| |||| |
Sbjct: 75 ttttttaataagacgaacggtcaaacatgtttttaaaagtcaacgacgtcaaatatttag 16
Query: 236 aaacggagggagta 249
|||||||||||||
Sbjct: 15 gaacggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||| |||||||||||||||||||||
Sbjct: 196 acatgtttaaccgttcgtcttattcaaaaa 167
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 222 bits (112), Expect = 2e-57
Identities = 172/192 (89%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||
Sbjct: 52 tgtttgaccattcgtcttattaaaaaaatttaagtaattatttattcttttcatatcatt 111
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||||| ||||||||||||||| | ||||| |||||||||||| ||||| |
Sbjct: 112 tgattcattgtaaaatatattttcatgtacatatatagttttacatattttacaaattat 171
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 172 tttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 231
Query: 238 acggagggagta 249
||||| ||||||
Sbjct: 232 acggatggagta 243
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 244 atactccatccgtttcaaaatgtttgacaccgttgacttttta-gcacatgtttgaccgt 186
Query: 69 tcgtcttattcaaaa 83
| |||||||||||||
Sbjct: 185 ttgtcttattcaaaa 171
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 210/240 (87%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||| ||| |||| |||||||||| |||||||| ||||| | || ||||||||| ||
Sbjct: 2 tactccatccatttcataatgtttgacaccgttgacttttta-gtacgtgtttgaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||| ||
Sbjct: 61 cgtcttatttaaaaaatttaagtaattatttattcttttcacatcgtttgattcattatt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||||||| | || ||| |||||||||||||||| | |||||||||||||
Sbjct: 121 aaatatattttcatgtacacacatagttttacatatttcacagattcttttgaataagat 180
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||| |||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 181 gaacggttaaacatgtgctaaaaagtcaacaatgtcaaacattt-gatacggagggagta 239
Score = 61.9 bits (31), Expect = 4e-09
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| || ||||||||||| |||||| ||||| |||||||||| |||||
Sbjct: 240 atactccctccgtatc-aaatgtttgacattgttgacttttta-gcacatgtttaaccgt 183
Query: 69 tcgtcttattcaaaa 83
|| ||||||||||||
Sbjct: 182 tcatcttattcaaaa 168
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||| ||| ||| | || |||||||||||||||||||||||||| |
Sbjct: 75 tttttaaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattatg 16
Query: 236 aaacggagggagta 249
||| ||| ||||||
Sbjct: 15 aaatggatggagta 2
>RF01062;MIR812;AAAA02005289.1/208-380 39946:Oryza sativa Indica
Group
Length = 173
Score = 220 bits (111), Expect = 7e-57
Identities = 153/167 (91%)
Strand = Plus / Minus
Query: 50 taagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttc 109
|||||||| |||||||||||||||||||| |||||| ||| |||| |||||||| |||||
Sbjct: 167 taagcacaggtttgaccgttcgtcttattaaaaaaaattaggtaactattaatttttttc 108
Query: 110 ctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttca 169
|||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 107 ttatcatttgatttattgttaaatatattttcatgtaggcatataattttatatatttca 48
Query: 170 caaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||||| | ||||||| ||| |||||||||||||||
Sbjct: 47 caaaagtttttgaataaaacgaacggtcaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||||||||| |||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgttttattcaaaaa 41
>RF01062;MIR812;AP003263.2/18066-18238 39947:Oryza sativa Japonica
Group
Length = 173
Score = 220 bits (111), Expect = 7e-57
Identities = 152/163 (93%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttt-cctat 113
|||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||
Sbjct: 162 acatgtttgaccgttcgttttattcaaaaaatttaagtaattattaattttttttcctat 103
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
||||||||||||| ||||||||||||| ||| || |||||||||||| ||||||||||||
Sbjct: 102 catttgattcattattaaatatatttttatgtag-catataattttatatatttcacaaa 44
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 43 agtttttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02012662.1/18305-18132 39946:Oryza sativa Indica
Group
Length = 174
Score = 220 bits (111), Expect = 7e-57
Identities = 157/171 (91%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 171 tttttagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattatt 112
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct: 111 ttcctataatttgattcattgttaaatatatttttatataggcatataattttatatatt 52
Query: 167 tcac-aaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||| |||| ||||| ||||||| ||||||| |||||| ||| ||||||||
Sbjct: 51 tcacaaaaatttttttaataagacgaacggtcaaatatatgccaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 134 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 174
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaattt 88
||||||||||||||||||| |||||||||
Sbjct: 17 tttgaccgttcgtcttattaaaaaaattt 45
>RF01058;MIR806;AP005647.3/116663-116903 39947:Oryza sativa Japonica
Group
Length = 241
Score = 220 bits (111), Expect = 7e-57
Identities = 199/226 (88%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacat-tttaagcacatgtttgaccg 67
||||||||||||| | |||| |||||| |||||||| | |||||||| ||||||||||
Sbjct: 1 atactccctccgtccctaaatatttgacaccgttgacttctttaagca--tgtttgaccg 58
Query: 68 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 59 ttcgtcttattcaaaaaatttaagtaattattaattctttccctatcatttgattcattg 118
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||||||| ||| | |||||| ||||| |||||||||||| ||||||||||||
Sbjct: 119 ttaaatatatttttatgtatacatatagttttatatatttcacaaatttttttgaataag 178
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
| |||||| ||| |||| ||||||||||||| |||||| ||||
Sbjct: 179 acaaacggtgaaacatgttttaaaaagtcaacgacgtcaaatattt 224
Score = 56.0 bits (28), Expect = 3e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||| ||||||| |||||| |||||||| |||||| |||||||||||||||
Sbjct: 224 aaatatttgacgtcgttgactttttaaa-acatgtttcaccgtttgtcttattcaaaaaa 166
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| ||| || ||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgcttaaagaagtcaacggtgtcaaatatttag 16
Query: 236 aaacggagggagta 249
||||||||||||
Sbjct: 15 ggacggagggagta 2
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 220 bits (111), Expect = 7e-57
Identities = 205/235 (87%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 11 actccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttc 70
|||| ||||||||| |||| ||||||| | ||||| |||| | | || |||||| ||||
Sbjct: 3 actctctccgtttctaaatatttgacgtcattgacttttttaa-atatatttgacagttc 61
Query: 71 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtta 130
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 atcttattcaaaaaatttaagtaattattaattctttttctatcatttgattcattgtta 121
Query: 131 aatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatg 190
|||||| ||| ||| | ||| || ||||||||||||||||||||||||| ||||||| |
Sbjct: 122 aatatacttttatgtatacatgtagttttacatatttcacaaaagtttttaaataagacg 181
Query: 191 aacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggg 245
|| ||| ||| ||| ||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 182 aatggtcaaacatgagctaaaaagtcaacggtgttaaatatttagaaacggaggg 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| |||| ||| || |||||||| ||||| || ||||||||||| ||||||
Sbjct: 236 ccctccgtttctaaatatttaacaccgttgacttttta-gctcatgtttgaccattcgtc 178
Query: 74 ttattcaaaaa 84
||||| |||||
Sbjct: 177 ttatttaaaaa 167
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
|||||||||||||||||| || |||||| | |||||||||| | |||||| |||| |
Sbjct: 75 tttttgaataagatgaactgtcaaatatatttaaaaaagtcaatgacgtcaaatatttag 16
Query: 236 aaacggagggagt 248
|||||||| ||||
Sbjct: 15 aaacggagagagt 3
>RF01062;MIR812;AP008207.1/5046230-5046401 39947:Oryza sativa
Japonica Group
Length = 172
Score = 218 bits (110), Expect = 3e-56
Identities = 156/170 (91%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tttttagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 110
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||
Sbjct: 109 ttcctatcatttgattcattattaaatatatttttatg-tggcatataatttcccatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
| | |||||||||||||||||| ||||||| || ||||| |||||||||
Sbjct: 50 ttataaaagtttttgaataagacgaacggtcaagcatgtgttaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 132 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaa 84
|||||| ||||||||||||||||||||||||
Sbjct: 11 cacatgcttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AC128644.4/73210-73382 39947:Oryza sativa Japonica
Group
Length = 173
Score = 218 bits (110), Expect = 3e-56
Identities = 155/170 (91%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 170 tttttagcacatgtttaaccgttcgtcttatttaaaaaatttaaataattattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 110 ttcctatcatttgatttattgttaaatatatttttatgcatacatatagttttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
| | |||||||||||||||| | ||||||| ||| |||||||||||||||
Sbjct: 50 ttataaaagtttttgaataaaacgaacggtcaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||||||||| |||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgttttattcaaaaa 41
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||| ||||||| ||||||||||| |||||||||||||||
Sbjct: 133 tttttaaataagacgaacggttaaacatgtgctaaaaagtc 173
>RF01058;MIR806;AACV01003041.1/6368-6610 39947:Oryza sativa Japonica
Group
Length = 243
Score = 218 bits (110), Expect = 3e-56
Identities = 200/226 (88%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaa-a 84
|||||||||||||||||||| |||| | | |||||| |||||||||||||||||||| |
Sbjct: 18 aaatgtttgacgccgttgacttttttaaaa-atgtttaaccgttcgtcttattcaaaaaa 76
Query: 85 atttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatg 144
|||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||
Sbjct: 77 atttaagtaattattaattctttttctatcatttgatttattgttaaatatacttttatg 136
Query: 145 caggcatataattttacatatttcacaaaag-tttttgaataagatgaacggttaaatat 203
| |||||| ||||||| || ||||||||| ||||| |||||||||| |||| ||||||
Sbjct: 137 tatacatatagttttacacatatcacaaaagtttttttaataagatgagcggtcaaatat 196
Query: 204 gtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 197 gtgctaaaaagtcaacggtgttaaataaaacgaaacggagggagta 242
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||||||||||| || | ||||||||||||| |||||||||||
Sbjct: 75 tttttgaataagacgaacggttaaacatttttaaaaaagtcaacggcgtcaaacattt 18
Score = 50.1 bits (25), Expect = 2e-05
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||| | ||| || |||||||| |||| ||||||| ||||||||
Sbjct: 243 atactccctccgtttcgttttatttaacaccgttgac-tttttagcacatatttgaccgc 185
Query: 69 tcgtcttattcaaaaaa 85
|| ||||||| ||||||
Sbjct: 184 tcatcttattaaaaaaa 168
>RF01058;MIR806;AC134046.4/162313-162553 39947:Oryza sativa Japonica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 212/242 (87%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||| |||| |||||||| ||| || |||| | |||| | | |||||
Sbjct: 1 atacttcctccgtttctaaatatttgacgcagttaacttttttaa-acatatataaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 60 tcgtcttattcaaaaaatttaaataattattaattcttttcctatcatttgatttgttgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaag-tttttgaataag 187
|||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||
Sbjct: 120 taaatatattttcatgtatacatatagttttacatatttcacaaaagttttttgaataag 179
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||||||| ||| |||| || |||||||||||| ||||| |||| |||||| ||||||
Sbjct: 180 acgaacggtcaaacatgtact-aaaagtcaacggcatcaaatatttagaaacgaagggag 238
Query: 248 ta 249
||
Sbjct: 239 ta 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||| |||||| |||| ||||| ||||||||| ||| || ||||||||||||||
Sbjct: 241 atactcccttcgtttctaaatatttgatgccgttgactttt--agtacatgtttgaccgt 184
Query: 69 tcgtcttattcaaaaaa 85
|||||||||||||||||
Sbjct: 183 tcgtcttattcaaaaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||||| |||||| ||||||| ||| | |||||| |||| |
Sbjct: 75 tttttgaataagacgaacggttatatatgtttaaaaaagttaactgcgtcaaatatttag 16
Query: 236 aaacggagggagta 249
||||||||| ||||
Sbjct: 15 aaacggaggaagta 2
>RF01058;MIR806;AP008210.1/13174748-13174507 39947:Oryza sativa
Japonica Group
Length = 242
Score = 218 bits (110), Expect = 3e-56
Identities = 211/242 (87%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||| |||||| |||| ||||| |||| ||| |||| | ||| ||||||||||
Sbjct: 1 atactcccttcgtttctaaatatttgatgccggtgatttttttaa-acaagtttgaccgt 59
Query: 69 tcgtcttattcaaaaaa-tttaagtaattattaattcttttcctatcatttgattcattg 127
|| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 60 tcatcttattcaaaaaaatttaaataactattaattcttttcctatcatttgattaattg 119
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||| ||| || | |||||| |||||||||||| ||||||||||||||| |||
Sbjct: 120 ttaaatatacttttatatatacatatagttttacatattttacaaaagtttttgaacaag 179
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||| ||||||||||||||||||||||||| |||| |||| |||| |||||||||||||
Sbjct: 180 acgaatggttaaatatgtgctaaaaagtcaatggtgccaaatatttagaaacggagggag 239
Query: 248 ta 249
||
Sbjct: 240 ta 241
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||| | || ||||| |||| ||||||| ||| ||| ||
Sbjct: 241 tactccctccgtttctaaatatttggcaccattgac-tttttagcacatatttaaccatt 183
Query: 70 cgtcttattcaaaaa 84
|||||| ||||||||
Sbjct: 182 cgtcttgttcaaaaa 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||||||||||| ||| ||| ||||| ||| ||| ||||| |||| |
Sbjct: 75 tttttgaataagatgaacggtcaaacttgtttaaaaaaatcaccggcatcaaatatttag 16
Query: 236 aaacggagggagta 249
||||| ||||||||
Sbjct: 15 aaacgaagggagta 2
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 197/225 (87%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||| |||| | |||||||| ||||||| || | ||||||| |
Sbjct: 1 atactccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccat 60
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 61 tcgtcttatttaaaaaatttaagtaattatttattcttttcatatcatttaattcattgt 120
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | |||||| ||||||||||||||| || ||||| |||||||
Sbjct: 121 taaatatactttcatgtacacatatagttttacatatttcac--aatttttttaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|| ||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 179 caaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 223
Score = 67.9 bits (34), Expect = 7e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| ||||| |||||||||||||| || |||||||| ||||||
Sbjct: 223 aaatgtttgacaccgttgacttttta-gcacatgtttgaccatttgtcttattaaaaaaa 165
Query: 86 tt 87
||
Sbjct: 164 tt 163
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||| ||||||| ||| ||| ||||| || || ||||||||||||||| |||| |||
Sbjct: 76 tttttaaataagacgaatggtcaaatacgtacttaaaaagtcaacggtgccaaatgtttt 17
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AP008218.1/16438312-16438552 39947:Oryza sativa
Japonica Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 212/242 (87%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||| ||||||||||||||| | | ||||||||||||
Sbjct: 1 atactccctccgtttctaaatatttggcgccgttgacatttttaa-atatgtttgaccgt 59
Query: 69 tcgtcttat-tcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
||| ||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 60 tcggcttatattaaaaaatttaagtaattattaattattttcctatcatttgatttattg 119
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
|||||||||||| || | | |||||| || |||||||||||||||||||||| |||||
Sbjct: 120 ttaaatatatttacacgtaaacatatagttgtacatatttcacaaaagttttt-aataaa 178
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||||||| ||| |||||||| |||||||||||||| ||| |||| |||||| ||| ||
Sbjct: 179 acgaacggtcaaacatgtgctacaaagtcaacggtgttaaatatttagaaacgaaggaag 238
Query: 248 ta 249
||
Sbjct: 239 ta 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||| ||| |||||| |||| ||| || |||||||| || || |||||||||||||||||
Sbjct: 240 tacttccttcgtttctaaatatttaacaccgttgactttgta-gcacatgtttgaccgtt 182
Query: 70 cgtcttattcaaaa 83
||| ||||| ||||
Sbjct: 181 cgttttattaaaaa 168
>RF01058;MIR806;AC116601.1/158497-158738 39947:Oryza sativa Japonica
Group
Length = 242
Score = 218 bits (110), Expect = 3e-56
Identities = 209/242 (86%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| ||||| ||||||| |||| | || |||||||||
Sbjct: 1 atactccctccgtttctaaatagttgactccgttgattttttttaaatatatttgaccgt 60
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||| |||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||
Sbjct: 61 tcgttttattcaaaaaattcaagtaattattaattctttccctatcattttatttgttgt 120
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| | | ||| | |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 121 taaatatactattatgtatacatatagttttacatattttacaaaagtttttgaataaga 180
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 181 cgaacggtcaaacatgtgctaaaaagtcaacgctgtcaaatgtttagaaacggagggagt 240
Query: 249 ac 250
||
Sbjct: 241 ac 242
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||| |||||| ||||||| ||||| |||||||||||||||||
Sbjct: 241 tactccctccgtttctaaacatttgacagcgttgacttttta-gcacatgtttgaccgtt 183
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 182 cgtcttattcaaaaa 168
>RF01062;MIR812;AP003437.3/37510-37337 39947:Oryza sativa Japonica
Group
Length = 174
Score = 216 bits (109), Expect = 1e-55
Identities = 149/161 (92%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaa-tttaagtaattattaattcttttcctatca 115
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 161 atgtttgaccgttcgtcttattcaaaaaaatttaagtaattattaattcttttcctatca 102
Query: 116 tttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag 175
||||||||||| ||||||||||||| ||| | |||||| ||||| ||||||||||||||
Sbjct: 101 tttgattcattcttaaatatatttttatgtatacatatagttttatatatttcacaaaag 42
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 41 tttttgaataagacaaacggtcaaacatgtgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||||||| ||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgtttgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02032931.1/1162-1334 39946:Oryza sativa Indica
Group
Length = 173
Score = 216 bits (109), Expect = 1e-55
Identities = 145/157 (92%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 160 atgtttgaccgttcgttttattcaaaaaatttaagtaattattaattattttcctatcat 101
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||
Sbjct: 100 ttgattcattgttaaatatatttttatgtaggtatataattttacatatttcataaaagt 41
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaa 213
|||| ||||||| ||||||| ||| || ||||||||
Sbjct: 40 ttttaaataagacgaacggtcaaacataagctaaaaa 4
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||| |||||
Sbjct: 14 atgtttgaccgttcgtcttatttaaaaa 41
>RF01058;MIR806;AACV01007446.1/266-27 39947:Oryza sativa Japonica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 184/208 (88%), Gaps = 2/208 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct: 18 aaatgtttgacgccgttgacttttaaa--acatgtttgaccgttcgtcttattcaaaaaa 75
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||||||||||||||||||||||||||||||||||| || |||| |||||||| ||
Sbjct: 76 tttaagtaattattaattcttttcctatcatttgatttatagttagatatatttatatat 135
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| ||||| |||||||||||||||| ||||||| |||||||| ||||||| ||| ||||
Sbjct: 136 atatatatagttttacatatttcacataagttttcgaataagacgaacggtcaaacatgt 195
Query: 206 gctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||||||||||
Sbjct: 196 tttaaaaagtcaacgacgtcaaacattt 223
Score = 69.9 bits (35), Expect = 2e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct: 223 aaatgtttgacgtcgttgactttttaaa-acatgtttgaccgttcgtcttattcgaaaa 166
Score = 52.0 bits (26), Expect = 4e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||||||| ||| |||| ||||| |||||||| |||||||||||
Sbjct: 74 tttttgaataagacgaacggtcaaacatgttttaaaa-gtcaacggcgtcaaacattt 18
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa Indica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 210/241 (87%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||||| |||||| |||| | | |||||||||| ||
Sbjct: 2 tactccctccgtttctaaatatttgacgctgttgacctttttaa-atatgtttgaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||| |||||||| |||||||||||| | | |||||||| ||||||||||||||
Sbjct: 61 tgtcttattaaaaaaatt-aagtaattattattattattcctatcgtttgattcattgtt 119
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||| | | | |||| |||||||||||| | ||||||||||||||||||
Sbjct: 120 aaatatactttcacgtatacttatagttttacatattttataaaagtttttgaataagac 179
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 180 gaacgttcaaatatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggagta 239
Query: 250 c 250
|
Sbjct: 240 c 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||| |||| ||||||||||| |||||||| ||||| |||||| ||||| ||||
Sbjct: 239 tactccctccatttcaaaatgtttgacaccgttgacttttta-gcacatatttgaacgtt 181
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 216 bits (109), Expect = 1e-55
Identities = 203/233 (87%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| ||||||| ||| ||||||| ||||| |||| |||||| | ||| | |||
Sbjct: 9 tccgtttcaaaatgttagacaccgttgatttttta-gcacgtgtttggtcattcatttta 67
Query: 77 ttcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatata 136
|| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||
Sbjct: 68 ttaaaaaaatttaagtaattatttattcttttaatatcatttgattcattcttaaatata 127
Query: 137 ttttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggt 196
|||||||| | |||||| ||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 128 ttttcatgtacacatatagttttacatatttcacaatttttttttaataagatgaatggt 187
Query: 197 taaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||| ||| |||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 188 taaacatgagctaaaaagtcaacggtgacaaacattttgaaacggagggagta 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||| | |||||||| |||| ||| ||||||| ||| |
Sbjct: 241 atactccctccgtttcaaaatgtttgtcaccgttgac-tttttagctcatgtttaaccat 183
Query: 69 tcgtcttattcaaaaaa 85
|| ||||||| ||||||
Sbjct: 182 tcatcttattaaaaaaa 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 204 gtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
|||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 47 gtgctaaaaaatcaacggtgtctaacattttgaaacgga 9
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 216 bits (109), Expect = 1e-55
Identities = 173/193 (89%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 48 atgtttaaccgttcgtcttatttaaaaaatttaagtaattattaattcttttcatatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| || ||| | ||||||| |||||||||||||||||||
Sbjct: 108 ttgattcattgttaaatatacttatatgtatgcatatagttttacatatttcacaaaa-a 166
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||||||||| | ||| ||| ||| |||||||||||||| ||||||||||| |||| ||
Sbjct: 167 ttttgaataaaacgaatggtcaaacatgtgctaaaaagttgacggtgtcaaatatttaga 226
Query: 237 aacggagggagta 249
|||||||||||||
Sbjct: 227 aacggagggagta 239
Score = 67.9 bits (34), Expect = 7e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||| ||
Sbjct: 239 tactccctccgtttctaaatatttgacaccgtcaacttttta-gcacatgtttgaccatt 181
Query: 70 cgtcttattcaaaa 83
||| ||||||||||
Sbjct: 180 cgttttattcaaaa 167
>RF01058;MIR806;AACV01000276.1/1941-2161 39947:Oryza sativa Japonica
Group
Length = 221
Score = 216 bits (109), Expect = 1e-55
Identities = 160/177 (90%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 28 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaatttttttcatatcat 87
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||| ||| ||| | |||||| ||||||| |||||||||||||
Sbjct: 88 ttgatttattgttaaatatacttttatgtatacatatagttttacacatttcacaaaagt 147
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||
Sbjct: 148 ttttgaataagacgaacggtcaaatatgtttaaaaaaatcaacggcgtcaaacattt 204
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| |||| || | ||||||||||||||||||| |||| | |||| |||||||||
Sbjct: 221 atactctctcctttcctaaatgtttgacgccgttgatttttttaa-acatatttgaccgt 163
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 162 tcgtcttattcaaaaa 147
>RF01062;MIR812;AAAA02024426.1/37944-37770 39946:Oryza sativa Indica
Group
Length = 175
Score = 214 bits (108), Expect = 5e-55
Identities = 158/172 (91%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa-tttaagtaattattaattct 105
|||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 172 tttttagcacatgtttaaccgttcgtcttattcaaaaaaatttaagtagttattaattct 113
Query: 106 tttcctatcatttgattcattgttaaatatattttcatg-caggcatataattttacata 164
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 112 tttcctatcatttgattcattgttaaatatatttttatgttaggcatataattttacata 53
Query: 165 tttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||| |||| ||||||| ||||||| ||| |||| ||||||||||
Sbjct: 52 tttcacaaaaaattttaaataagacgaacggtcaaacatgtactaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 135 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 175
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaa 83
|||||||||||||||||||||||| ||||
Sbjct: 12 acatgtttgaccgttcgtcttatttaaaa 40
>RF01062;MIR812;AAAA02025498.1/22722-22550 39946:Oryza sativa Indica
Group
Length = 173
Score = 214 bits (108), Expect = 5e-55
Identities = 149/160 (93%), Gaps = 2/160 (1%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaa-tttaagtaattattaattcttttcctat 113
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 162 acatgtttgaccgttcgtcttattcaaaaaaatttaagtaattattaattcttttcctat 103
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
||||||||| |||||||||||||||| || |||||||||| ||||||||||||| |||
Sbjct: 102 catttgatttgttgttaaatatatttttatataggcatataa-tttacatatttcataaa 44
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaa 213
||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 43 agtttttgaataagacgaacggtcaaacatgtgctaaaaa 4
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AL772421.5/52087-52262 4530:Oryza sativa (rice)
Length = 176
Score = 214 bits (108), Expect = 5e-55
Identities = 153/168 (91%)
Strand = Plus / Minus
Query: 52 agcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcct 111
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 168 agcacatgtttgaccgctcgtcttattcaaaaaaattaaataattattaattcttttcct 109
Query: 112 atcatttgattcattgttaaatatattttcatgcaggcatataattttacatatttcaca 171
|||||||||||| |||||||||||| ||| ||||| | |||| ||||||||||||||||
Sbjct: 108 atcatttgattcgttgttaaatatacttttatgcatacgtatagttttacatatttcaca 49
Query: 172 aaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaac 219
||| ||||||||||||| ||||||| ||| ||||| ||||||||||||
Sbjct: 48 aaaatttttgaataagacgaacggtcaaacatgtgataaaaagtcaac 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||||||||||||
Sbjct: 14 cacatgtttgaccgttcgtcttattcaaaaa 44
>RF01058;MIR806;AP008218.1/23692399-23692639 39947:Oryza sativa
Japonica Group
Length = 241
Score = 214 bits (108), Expect = 5e-55
Identities = 175/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||| ||||| || |||||||||||||| ||||| |||| | | | |||||||||||
Sbjct: 2 tactccttccgtctctaaatgtttgacgccattgacttttttaa-ataggtttgaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattattaaattttttcctatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||| ||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 aaatatacttttatgtagatatataattttacatattttacaaaagtttttgaataagac 180
Query: 190 gaacggttaaatatgt 205
||||||| ||| ||||
Sbjct: 181 gaacggtcaaacatgt 196
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||||||||||||||
Sbjct: 196 acatgtttgaccgttcgtcttattcaaaaa 167
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 214 bits (108), Expect = 5e-55
Identities = 174/195 (89%), Gaps = 2/195 (1%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| | |||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 42 atgtttaatcgttcgtcttattcaaaaaaattaagtaattattaattattgtcttatcat 101
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag- 175
|||||||||||||||||||| || |||| | |||||| |||||||||||||| |||||
Sbjct: 102 ttgattcattgttaaatatacttacatgtatacatatagttttacatatttcataaaagt 161
Query: 176 -tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 162 ttttttgaataagacaaacggttaagcatgtgctaaaaagtcaacggtgtcaaatattta 221
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 222 gaaacggagggagta 236
Score = 81.8 bits (41), Expect = 4e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| |||| |||||||| || |||||
Sbjct: 237 atactccctccgtttctaaatatttgacaccgttgac-tttttagcacatgcttaaccgt 179
Query: 69 tcgtcttattcaaaaaa 85
| |||||||||||||||
Sbjct: 178 ttgtcttattcaaaaaa 162
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 214 bits (108), Expect = 5e-55
Identities = 172/192 (89%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||| ||| || |||| |||||| |||||||||||||||| ||||||||||
Sbjct: 45 acatgtttgaccattcatcatattaaaaaaaactaagtaattattaattattttcctatc 104
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||| ||||||| | ||||| |||||||||||||||| ||
Sbjct: 105 atttgattcattgttaaatatactttcatgtatatatatagttttacatatttcacagaa 164
Query: 175 gtttttgaataagatgaacggttaaatatgtgc-taaaaagtcaacggtgtcaaacattt 233
|||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||
Sbjct: 165 ttttttgaataagataaacggtcaaacatgtgcttaaaaagtcaacggtgtcaaacattt 224
Query: 234 cgaaacggaggg 245
|||||||||||
Sbjct: 225 agaaacggaggg 236
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 236 ccctccgtttctaaatgtttgacaccgttgactttttaagcacatgtttgaccgtttatc 177
Query: 74 ttattcaaaaaatt 87
||||||||||||||
Sbjct: 176 ttattcaaaaaatt 163
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 214 bits (108), Expect = 5e-55
Identities = 206/236 (87%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
||||| |||| |||| |||||| ||||||| |||||| | || |||||| ||| ||||
Sbjct: 7 cctccatttctaaatatttgacaccgttgattttttaaa-atatatttgactgtttgtct 65
Query: 75 tattcaaaa-aatttaagtaattattaattcttttcctatcatttgattcattgttaaat 133
|||| |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 66 tattaaaaaaaatttaagtaattattaattattttcctatcatttgattcattgtgaaat 125
Query: 134 atattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaac 193
||| || ||||| |||||| ||||||||||||||||||||||||| ||||||| |||
Sbjct: 126 atacttatatgcatacatatagttttacatatttcacaaaagtttttaaataagacgaat 185
Query: 194 ggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| ||| |||||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 186 ggtcaaacatgtgctaaaaagttaacggtgtcaaatatttagaaacggagggagta 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||| ||||| || ||||| |||||||||||||| ||
Sbjct: 241 tactccctccgtttctaaatatttgacaccgttaacttttta-gcacatgtttgaccatt 183
Query: 70 cgtcttattcaaaaa 84
||||||||| |||||
Sbjct: 182 cgtcttatttaaaaa 168
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 214 bits (108), Expect = 5e-55
Identities = 171/192 (89%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
|||| |||| ||||||||||| |||||||||||||||||||| ||| ||||| |||||||
Sbjct: 48 tgttcgaccattcgtcttattaaaaaaatttaagtaattatttattattttcatatcatt 107
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||||||||||||| | ||| ||| | |||||||||||||||||||||||| |
Sbjct: 108 tgattcattgttaaataaactttgatgtacacatataattttacatatttcacaatttta 167
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||| |||
Sbjct: 168 ttttaataagacgaacggtcaaatatgtgctaaaaagtcaacggtatcaaacattttgaa 227
Query: 238 acggagggagta 249
||||||||||||
Sbjct: 228 acggagggagta 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||||||||| |||||||| |||| ||||||| |||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgataccgttgac-tttttagcacatatttgaccgt 182
Query: 69 tcgtcttatt 78
||||||||||
Sbjct: 181 tcgtcttatt 172
>RF01058;MIR806;AACV01022680.1/18918-18679 39947:Oryza sativa
Japonica Group
Length = 240
Score = 214 bits (108), Expect = 5e-55
Identities = 175/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 acatgtttgactgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatt 105
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||||||| ||| | || |||||||| ||||||||||||||
Sbjct: 106 atttgattcattgttaaatatatttttatgtatacacataatttttcatatttcacaaaa 165
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
|||||| |||||||||| ||| ||| | || ||||||||||||| |||||||||||
Sbjct: 166 atttttggataagatgaatggtcaaacacgtttaaaaaagtcaacggcgtcaaacattta 225
Query: 235 gaaacggagggagtac 250
| || |||||||||||
Sbjct: 226 ggaa-ggagggagtac 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||| |||| | || ||||||||| ||| |||||| ||||||
Sbjct: 224 aaatgtttgacgccgttgactttttta-aacgtgtttgaccattcatcttatccaaaaa 167
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 214 bits (108), Expect = 5e-55
Identities = 200/230 (86%), Gaps = 8/230 (3%)
Strand = Plus / Plus
Query: 27 aatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa-- 84
||||||| || ||||||| ||||||||| ||||||||| |||||||||||||||||
Sbjct: 19 aatgtttaacaccgttgattttttaagcatgtgtttgaccattcgtcttattcaaaaata 78
Query: 85 -----atttaagtaattattaattcttttcctatcatttgattcattgttaaatatattt 139
||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||
Sbjct: 79 tttaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactt 138
Query: 140 tcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaa 199
|||| | |||||| |||||||||||||||||| ||||||||||||| ||||||| ||
Sbjct: 139 tcatatacacatatagttttacatatttcacaaat-tttttgaataagacgaacggtcaa 197
Query: 200 atatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
| |||||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 198 acatgtgctaaaaagttaacggtgtcaaatattttgaaacggagggagta 247
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||| ||||| || ||||| |||||||||||||||||
Sbjct: 247 tactccctccgtttcaaaatatttgacaccgttaacttttta-gcacatgtttgaccgtt 189
Query: 70 cgtcttattcaaaaaattt 88
|||||||||||||||||||
Sbjct: 188 cgtcttattcaaaaaattt 170
>RF01058;MIR806;AL662981.3/103642-103882 39947:Oryza sativa Japonica
Group
Length = 241
Score = 214 bits (108), Expect = 5e-55
Identities = 208/240 (86%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| ||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 2 tactccctccgtttctaaatatttgacgccgttgacttttttagcacttgtttgaccgtt 61
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||| |||||||| || |||| |||| || |||||||||||||||||| ||||||
Sbjct: 62 tgtcttattaaaaaaattaaa-taataattattttttttcctatcatttgatttattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||| ||| | |||||| ||||| |||||||||||||||||||||||||||
Sbjct: 121 aaatatacttttatgtatacatatagttttatatatttcacaaaagtttttgaataagac 180
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| |||||| |||| |||||| ||| ||||||||| |||| |||||||||| ||||
Sbjct: 181 aaacagttaaacatgtactaaaagaacaatggtgtcaaatatttagaaacggaggaagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaa-gtcaacggtgtcaaacatttc 234
||||| ||||||| |||||| ||| | |||||||||| |||||||| |||||| ||||
Sbjct: 76 ttttttaataagacaaacggtcaaacaagtgctaaaaaagtcaacggcgtcaaatattta 17
Query: 235 gaaacggagggagtac 250
||||||||||||||||
Sbjct: 16 gaaacggagggagtac 1
>RF01062;MIR812;AP003449.2/58810-58639 39947:Oryza sativa Japonica
Group
Length = 172
Score = 212 bits (107), Expect = 2e-54
Identities = 150/163 (92%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctat 113
|||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 162 cacatgtttgaccgtttgtcttatttaaaaattttaagtaattattaattattttcctat 103
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
|||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||
Sbjct: 102 tatttgattcattgttaaatatatttttatgtaggcatataa-tttacatatttcacaaa 44
Query: 174 agtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||| ||||||| ||| || |||||||||||||||||||
Sbjct: 43 agtttttaaataagacgaatagtcaaatatgtgctaaaaagtc 1
>RF01062;MIR812;AAAA02009498.1/7058-6888 39946:Oryza sativa Indica
Group
Length = 171
Score = 212 bits (107), Expect = 2e-54
Identities = 146/159 (91%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 162 acatatttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcttatc 103
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||||
Sbjct: 102 atttgattcattgttaaatatatttttatgtaggcatataattttacatattttataaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaa 213
|||| |||||||| ||||||| ||| || |||| ||||
Sbjct: 42 attttcgaataagacgaacggtcaaacatatgcttaaaa 4
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||| ||||||||||||||||||||||| ||||
Sbjct: 4 ttttaagcatatgtttgaccgttcgtcttattcgaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgt 205
||||||||||||| ||||||| ||||||||
Sbjct: 133 tttttgaataagacgaacggtcaaatatgt 162
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 212 bits (107), Expect = 2e-54
Identities = 210/242 (86%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| ||||| | || ||||| ||| |
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgacttttta-gtacgtgtttaaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|| ||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 60 tcatcttattcaaaaagtttaagtaattatttattcttttcatatcatttaattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | || ||||||||||||||||||| || |||| |||||||
Sbjct: 120 taaatatactttcatgta--cacataattttacatatttcactaattattttaaataaga 177
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||| |||||||||||||||||||| | |||||||||||| |||| |||||||| ||||
Sbjct: 178 cgaatggttaaatatgtgctaaaaaattaacggtgtcaaatattttaaaacggagtgagt 237
Query: 249 ac 250
||
Sbjct: 238 ac 239
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||||||| ||||||| | || |||||||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagatgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;CR855238.1/21532-21767 4530:Oryza sativa (rice)
Length = 236
Score = 212 bits (107), Expect = 2e-54
Identities = 167/187 (89%)
Strand = Plus / Plus
Query: 63 gaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgatt 122
||||| |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||
Sbjct: 49 gaccgctcgtcttattcaaaaaatttaaataactattaattcttttgctatcatttgatt 108
Query: 123 cattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttga 182
|||||||||||||| ||| ||||| | |||| |||||||||||||||||||||||||||
Sbjct: 109 cattgttaaatatacttttatgcatacgtatagttttacatatttcacaaaagtttttga 168
Query: 183 ataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
|||||| ||||||| ||| |||| ||||||||||||| |||||||| | |||||||||
Sbjct: 169 ataagacgaacggtcaaacatgtactaaaaagtcaacagtgtcaaataaaacgaaacgga 228
Query: 243 gggagta 249
| |||||
Sbjct: 229 gagagta 235
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| |||||||||| | |||||| | |||||| ||||| | ||||||||||||||
Sbjct: 236 atactctctccgtttcgttttatttgacactgttgacttttta-gtacatgtttgaccgt 178
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 177 tcgtcttattcaaaaa 162
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 212 bits (107), Expect = 2e-54
Identities = 189/214 (88%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 31 tttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaa 90
|||||| |||||||| |||||| || ||||||||| ||||||||||| |||||||||||
Sbjct: 23 tttgacaccgttgactttttaat-acgtgtttgaccattcgtcttatttaaaaaatttaa 81
Query: 91 gtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggca 150
|||||||| || || ||| |||||||||||||||||||||||||| ||||||| | ||
Sbjct: 82 ataattatttatcctcttcatatcatttgattcattgttaaatatactttcatgtacaca 141
Query: 151 tataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaa 210
|||| ||||||||||||||| || ||||| |||||||||| |||| ||| |||||||||
Sbjct: 142 tatagttttacatatttcac--aatttttttaataagatgagcggtcaaacatgtgctaa 199
Query: 211 aaagtcaacggtgtcaaacatttcgaaacggagg 244
||||||||||||||||||||||| ||||||||||
Sbjct: 200 aaagtcaacggtgtcaaacattttgaaacggagg 233
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
|||||||||| ||||||||||| |||||||| ||||| ||||||||||||||| || |||
Sbjct: 233 cctccgtttcaaaatgtttgacaccgttgacttttta-gcacatgtttgaccgctcatct 175
Query: 75 tattcaaaaaatt 87
|||| ||||||||
Sbjct: 174 tattaaaaaaatt 162
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 212 bits (107), Expect = 2e-54
Identities = 183/207 (88%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||
Sbjct: 8 aaatgtttgacgccgttgacttttttaa-acatgtttgaccgttcgtcttatttaaaaaa 66
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
| |||||| ||||||||||| || ||||||||||||||||||||||||||| ||| |||
Sbjct: 67 tataagtagttattaattctatttctatcatttgattcattgttaaatatacttttatgt 126
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||||||||||||||||| ||||||||||||| ||| ||| ||| ||||
Sbjct: 127 atacatatagttttacatatttcacaaaattttttgaataagacgaatggtcaaacatgt 186
Query: 206 gctaaaaagtcaacggtgtcaaacatt 232
||||||||||||| ||||||||||
Sbjct: 187 ttgaaaaagtcaacggcgtcaaacatt 213
Score = 75.8 bits (38), Expect = 3e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 27 aatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaat 86
||||||||||||||||||| |||| | |||||||||||| |||||||||||||||||||
Sbjct: 213 aatgtttgacgccgttgactttttcaa-acatgtttgaccattcgtcttattcaaaaaat 155
Query: 87 tt 88
||
Sbjct: 154 tt 153
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||| ||||||| ||||||| ||| |||| ||||||||||||| |||||||||||
Sbjct: 65 tttttaaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 8
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 212 bits (107), Expect = 2e-54
Identities = 168/187 (89%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 63 gaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgatt 122
|||| ||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 48 gaccattcgtcttattaaaaaaatt-aagtaattattaattttttttctatcatttgatt 106
Query: 123 cattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttga 182
||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||
Sbjct: 107 tattgttaaatatattttcatgtatacatataattttacatatttcacaaaattttttga 166
Query: 183 ataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
|||||| ||||||| ||| || || ||||||||||||||||||||| |||| |||||||
Sbjct: 167 ataagacgaacggtcaaacatatgttaaaaagtcaacggtgtcaaatatttaaaaacgga 226
Query: 243 gggagta 249
| |||||
Sbjct: 227 gagagta 233
Score = 87.7 bits (44), Expect = 7e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| |||||||| |||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 234 atactctctccgtttttaaatatttgacaccgttgactttttaa-catatgtttgaccgt 176
Query: 69 tcgtcttattcaaaaaattt 88
||||||||||||||||||||
Sbjct: 175 tcgtcttattcaaaaaattt 156
>RF01058;MIR806;AAAA02035408.1/6482-6708 39946:Oryza sativa Indica
Group
Length = 227
Score = 212 bits (107), Expect = 2e-54
Identities = 180/203 (88%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 30 gtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaattta 89
||||||| |||||||| |||||| | || ||||||||||||||||||||||||||||||
Sbjct: 13 gtttgacaccgttgactttttaaa-atatatttgaccgttcgtcttattcaaaaaattta 71
Query: 90 agtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggc 149
|| ||||||||||||||||| || ||||||||||||||||||||||| ||| || | |
Sbjct: 72 agcaattattaattcttttcataccatttgattcattgttaaatatacttttatatatac 131
Query: 150 atataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgcta 209
||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||| |
Sbjct: 132 atatagttttacatatttcataaaagtttttgaataagacgaacggttaaacatgtttaa 191
Query: 210 aaaagtcaacggtgtcaaacatt 232
|||||||||||| ||||||||||
Sbjct: 192 aaaagtcaacggcgtcaaacatt 214
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaac 229
||||||||||||| ||||||| |||||| | ||||||||||||||||||||||
Sbjct: 66 tttttgaataagacgaacggtcaaatatattttaaaaagtcaacggtgtcaaac 13
Score = 67.9 bits (34), Expect = 7e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 27 aatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||
Sbjct: 214 aatgtttgacgccgttgacttttttaa-acatgtttaaccgttcgtcttattcaaaaa 158
>RF01058;MIR806;AP008208.1/19468197-19467957 39947:Oryza sativa
Japonica Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 180/203 (88%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
||||| |||||| |||| ||||||||||||||| |||||| | |||||||||||| ||
Sbjct: 5 tcccttcgtttctaaatatttgacgccgttgactttttaaa-atttgtttgaccgtttgt 63
Query: 73 cttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaa 132
|||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 64 cttattaaaaaaatttaagtaattattaattattttcctatcatttaatttattgttaaa 123
Query: 133 tatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaa 192
||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 124 tatatttatatgtatacatatagttttacatatttcacaaaagtttttgaataagacgaa 183
Query: 193 cggttaaatatgtgctaaaaagt 215
|||| ||| | ||||||||||||
Sbjct: 184 cggtcaaacacgtgctaaaaagt 206
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||| |||||||||||||||||||||||||||
Sbjct: 204 tttttagcacgtgtttgaccgttcgtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
|||||||||||||| |||||| |||| |||||| |||||
Sbjct: 43 taaaaagtcaacggcgtcaaatatttagaaacgaaggga 5
>RF01058;MIR806;AP008218.1/3545660-3545458 39947:Oryza sativa
Japonica Group
Length = 203
Score = 212 bits (107), Expect = 2e-54
Identities = 155/170 (91%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28 atgtttgatcgttcgtcttattcaaaaaatttaagtaattattaattgttttcctatcat 87
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| || ||| | |||||| ||||| ||||||||||||||
Sbjct: 88 ttgattcattgttaaatatacttatatgtatacatatagttttatatatttcacaaaaga 147
Query: 177 ttttgaataagatgaacggttaaatatgtgct--aaaaagtcaacggtgt 224
|||||||||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 148 ttttgaataagacgaacggtcaaatatgtgcttaaaaaagtcaacggtgt 197
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||||||||||| ||||||||||||||||||||||||
Sbjct: 184 ttttaagcacatatttgaccgttcgtcttattcaaaa 148
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 210/242 (86%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| |||||||| |||| || || | ||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccat 60
Query: 69 tcgtcttattcaaaa-aatttaagtaattattaattcttttcctatcatttgattcattg 127
||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcatta 120
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||||||||||| | |||||| |||||||||||| || || ||||| ||||||
Sbjct: 121 ttaaatatattttcatgtacacatatagttttacatattt--cataatttttttaataag 178
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||| ||||||||| |||||||||||| || | || |||||||| |||| | ||||||
Sbjct: 179 acgaatggttaaatacgtgctaaaaagttaaggccgttaaacattttgaaatgaagggag 238
Query: 248 ta 249
||
Sbjct: 239 ta 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaa-gtcaacggtgtcaaacatttc 234
||||||||||||| ||| ||| ||||| || ||||||| ||||||||||||||||||||
Sbjct: 76 tttttgaataagacgaatggtcaaatacgtactaaaaaagtcaacggtgtcaaacatttt 17
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 212 bits (107), Expect = 2e-54
Identities = 180/203 (88%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
||||||| || | ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 38 ttttaagtacgtatttgaccattcgtcttattcaaaaaatttaagtaattatttattctt 97
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||| |||||||||||||||||||||||||||||| ||| | || ||| |||||||||||
Sbjct: 98 ttcatatcatttgattcattgttaaatatatttttatgtacacacatagttttacatatt 157
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
|||| ||| ||||| ||||||| ||||||| |||||||||||||||||| ||||||| |
Sbjct: 158 tcac-aaatttttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgata 216
Query: 227 aacatttcgaaacggagggagta 249
|| |||| ||||||||||||||
Sbjct: 217 aatattttaaaacggagggagta 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||| ||| | ||||| || ||||| |||||| |||||||||
Sbjct: 240 atactccctccgttttaaaatatttatcaccgttaacttttta-gcacatatttgaccgt 182
Query: 69 tcgtcttattcaaaaaattt 88
|||||||||| |||||||||
Sbjct: 181 tcgtcttattaaaaaaattt 162
Score = 44.1 bits (22), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||| ||| ||||| || || |||| |||| ||||| ||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaatacgtacttaaaaatcaatggtgttaaacattt 18
>RF01058;MIR806;AACV01008187.1/33319-33559 39947:Oryza sativa
Japonica Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 173/195 (88%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 46 acatgtttgaccgttcgtcttatttaaaaaatttaagtaattattaattcttttcctatc 105
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||| ||||||||||||| ||| | | | |||||| |||||||||||||| ||||
Sbjct: 106 atttgatttattgttaaatatacttttacgtatacatatagttttacatatttcataaaa 165
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
|||||| ||||||| ||||| | |||||| | |||||||||||| ||||||| ||||
Sbjct: 166 gttttttaataagacgaacgatcaaatatatttaaaaaagtcaacgatgtcaaatatttg 225
Query: 235 gaaacggagggagta 249
|| ||||||||||||
Sbjct: 226 gagacggagggagta 240
>RF01062;MIR812;AL935067.2/33324-33152 4530:Oryza sativa (rice)
Length = 173
Score = 210 bits (106), Expect = 7e-54
Identities = 148/162 (91%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 162 acatgtttgaccattcatcttattcaaaaaattagagtaattattaattctttgcctatc 103
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||||||| ||| | |||||| |||| ||||||||||||||
Sbjct: 102 atttgattcattgttaaatatatttttatgtatacatatagttttgcatatttcacaaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 42 gtttttgaataagatgaacggtcaaacatgtactaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||| |||||||||||||
Sbjct: 12 acatgtttgaccgttcatcttattcaaaaa 41
>RF01062;MIR812;AACV01006708.1/2231-2403 39947:Oryza sativa Japonica
Group
Length = 173
Score = 210 bits (106), Expect = 7e-54
Identities = 154/170 (90%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||
Sbjct: 170 tttttagcacatgtttgaccactcgtcttattaaaaaaatttaaataattattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||||||||||||||||||||||||||||| ||| ||||| | |||| |||||||||||
Sbjct: 110 ttcctatcatttgattcattgttaaatatacttttatgcatacgtatagttttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||||| |||| || |||||||||||||||||||
Sbjct: 50 tcacaaaagtttttgaataaagcgaacagtcaaatatgtgctaaaaagtc 1
>RF01058;MIR806;AAAA02029195.1/6039-6277 39946:Oryza sativa Indica
Group
Length = 239
Score = 210 bits (106), Expect = 7e-54
Identities = 211/241 (87%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattt-taagcacatgtttgaccgt 68
||||||||| ||||| |||| |||||||| |||||| ||| ||| |||| |||||| |
Sbjct: 2 tactccctcagtttctaaatatttgacgcagttgacttttctaa--acatatttgactgc 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattatttgttctattcctatcaattgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| || ||||| |||||| |||||||||||| |||||||||||| |||||||
Sbjct: 120 taaatata-cttaatgcatacatatagttttacatattttacaaaagttttt-aataaga 177
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||| | ||| ||||| ||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 178 cgaacgataaaacatgtgataaaaagtcaacggtgtcaaatatttagaaacggagggagt 237
Query: 249 a 249
|
Sbjct: 238 a 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| |||| | ||||||||| | |||
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgac-tttttatcacatgttttatcgt 181
Query: 69 tcgtcttattcaaaa 83
|||||||||| ||||
Sbjct: 180 tcgtcttattaaaaa 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| || | || |||||||| |||||||||| | |||||| |||| |
Sbjct: 75 tttttgaataagacgagcagtcaaatatgtttagaaaagtcaactgcgtcaaatatttag 16
Query: 236 aaacggagggagtac 250
|||| ||||||||||
Sbjct: 15 aaactgagggagtac 1
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 210 bits (106), Expect = 7e-54
Identities = 206/238 (86%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| ||||||||||| ||||| | ||||||| |||||||||||| |
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccat 60
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |
Sbjct: 61 tcgttttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattat 120
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| |||||| | |||||| |||||||||||||||||| ||||| | |||||
Sbjct: 121 taaatatactttcatatacacatatagttttacatatttcacaaactttttttattaaga 180
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
||||||| ||| || ||||||||| |||||||||| ||| |||| |||||| |||||
Sbjct: 181 cgaacggtcaaacatatgctaaaaaatcaacggtgttaaatattt-gaaacgaaggga 237
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||||||||| | ||| ||| ||| |||| || ||||| | |||||||||||||||||
Sbjct: 76 tttttgaataaaacgaatggtcaaacatgtacttaaaaaattaacggtgtcaaacatttt 17
Query: 235 gaaacggagggagta 249
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| |||| |||||||||||||||||||| | ||||||
Sbjct: 205 tttttagcatatgtttgaccgttcgtcttaataaaaaaa 167
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 210 bits (106), Expect = 7e-54
Identities = 209/242 (86%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| ||||| || ||||| | || ||||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgtttacttttta-gtacgtgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||||||||||||||| ||||||| ||| ||||| ||| ||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatttaacaaattatttattattttcatattatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | |||| ||||||||||||||||| |||||||||||||
Sbjct: 120 taaatatactttcatgtacaaatatggttttacatatttcacaattttttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||| ||| ||| |||||||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 180 cgaatggtgaaacatgtgctaaaaagtgaacggtgcataacattttgaaacggagggagt 239
Query: 249 ac 250
||
Sbjct: 240 ac 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||| ||| ||| | || ||||||||| ||||||||||||||||| |
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactaaaaagtaaacggtgtcaaacattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||| | ||||| || ||||| |||||||||| ||| ||
Sbjct: 240 tactccctccgtttcaaaatgttatgcaccgttcacttttta-gcacatgtttcaccatt 182
Query: 70 cgtcttattcaaaaaa 85
||||||||||||||||
Sbjct: 181 cgtcttattcaaaaaa 166
>RF01058;MIR806;AAAA02028052.1/8526-8286 39946:Oryza sativa Indica
Group
Length = 241
Score = 210 bits (106), Expect = 7e-54
Identities = 154/170 (90%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 48 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctaccat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| ||| ||| | |||||| ||||||||||||||||||||
Sbjct: 108 ttgattcattgttaaatatacttttatgtatacatatagctttacatatttcacaaaagt 167
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
|||||||||||| ||| ||| ||| ||||| ||||||| ||||| ||||
Sbjct: 168 ttttgaataagacgaatggtcaaacatgtgagaaaaagttaacggcgtca 217
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||| |||||||||||||||||
Sbjct: 197 cacatgtttgaccattcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02020686.1/40683-40933 39946:Oryza sativa Indica
Group
Length = 251
Score = 210 bits (106), Expect = 7e-54
Identities = 174/198 (87%), Gaps = 9/198 (4%)
Strand = Plus / Plus
Query: 61 ttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat---- 116
|||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 53 ttgagcgttcgtcttattaaaaaaatttaagtaattgttacatcttttcctatcatttga 112
Query: 117 -----ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcaca 171
|||||||||||||||||||||||| ||| |||||||||||||||||||||||| |
Sbjct: 113 ttcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcata 172
Query: 172 aaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacat 231
|||||||| |||||||| ||||||| ||| ||||||||||||||||| |||| |||||||
Sbjct: 173 aaagttttcgaataagacgaacggtcaaacatgtgctaaaaagtcaatggtgccaaacat 232
Query: 232 ttcgaaacggagggagta 249
||||||| ||||||||||
Sbjct: 233 ttcgaaatggagggagta 250
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||||||||||||| | || ||||| ||||| ||||||||||||||||
Sbjct: 251 atactccctccatttcgaaatgtttggcaccattgacttttta-gcacatgtttgaccgt 193
Query: 69 tcgtcttattcaaaaa 84
||||||||||| ||||
Sbjct: 192 tcgtcttattcgaaaa 177
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 210 bits (106), Expect = 7e-54
Identities = 209/241 (86%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| ||||||| |||||| | |||||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacatcgttgactttttaat-atatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| |||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 60 ttgtcttatttaaaaaatttaagtaattatttattcttttcatatcattttattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
||| |||| ||| || | |||||| ||||||||||||||| || ||||| ||| |||
Sbjct: 120 taattatacttttatatacacatatagttttacatatttcac--aatttttttaatgaga 177
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||| |||
Sbjct: 178 cgaacggttaaacatgtgctaaaaagtcaacggtgttaaatattttgaaacggaggtagt 237
Query: 249 a 249
|
Sbjct: 238 a 238
Score = 69.9 bits (35), Expect = 2e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||| |||| ||| || |||||||| ||||| |||||||||| |||||
Sbjct: 239 atactacctccgtttcaaaatatttaacaccgttgacttttta-gcacatgtttaaccgt 181
Query: 69 tcgtcttattcaaaaaatt 87
|||||| ||| ||||||||
Sbjct: 180 tcgtctcattaaaaaaatt 162
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 43 taaaaagtcaacgatgtcaaacattttgaaacggagggagta 2
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 210 bits (106), Expect = 7e-54
Identities = 194/222 (87%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| || || | || ||||||||| ||| || |||||||||||
Sbjct: 19 aaatgtttgacaccgttgactttcta-gtacgtgtttgaccattcatcctattcaaaaaa 77
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||| ||| |||| ||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 78 tttaaataactatttattattttcatatcatttgattcattgttaaatatactttcatgt 137
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| |||||||||||||||||| ||| ||||||||| ||||||||||| ||||
Sbjct: 138 acacatatagttttacatatttcacaaacttttatgaataagacgaacggttaaacatgt 197
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| ||||||||||||||||| |||||||| |||| ||||||||
Sbjct: 198 gttaaaaagtcaacggtgttaaacattttgaaatggagggag 239
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
|||||||| |||| |||||||| || |||||||| |||||| ||||||||| ||||||||
Sbjct: 239 ctccctccatttcaaaatgtttaacaccgttgactttttaa-cacatgtttaaccgttcg 181
Query: 72 tcttattcaaaaaa 85
||||||||| ||||
Sbjct: 180 tcttattcataaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||| |||||| ||| ||| | || ||| |||||||||||||||||||||||
Sbjct: 76 tttttgaataggatgaatggtcaaacacgtactagaaagtcaacggtgtcaaacattt 19
>RF01058;MIR806;AP008214.1/6309436-6309676 39947:Oryza sativa
Japonica Group
Length = 241
Score = 210 bits (106), Expect = 7e-54
Identities = 211/242 (87%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| |||||||||||||||||||| | ||||| ||||| | |||||| ||| |
Sbjct: 1 atactccatccgtttcgaaatgtttgacactattgactttttatt-atatgtttaaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|| ||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||
Sbjct: 60 tcatcttattaaaaaaatt-aagtaattattaattatttttctatcatttgattcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | |||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 119 taaatatatttttatgtatacatatagttttatatatttcacaaaattttttgaataaga 178
Query: 189 tgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
|||| || ||| ||||||| ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 179 cgaacagtcaaacatgtgctaaaaaaatcaacggtatcaaacatttcgaaacggagtgag 238
Query: 248 ta 249
||
Sbjct: 239 ta 240
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| |||||||||||||||||||| ||||||| |||| |||||||||||||| |||
Sbjct: 240 tactcactccgtttcgaaatgtttgataccgttgatttttttagcacatgtttgactgtt 181
Query: 70 cgtcttattcaaaaaattt 88
|||||||||||||||||||
Sbjct: 180 cgtcttattcaaaaaattt 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||||||| ||||||| || | ||||||||||| |||||||||||||||
Sbjct: 75 ttttttaataagatgaatggttaaacatataataaaaagtcaatagtgtcaaacatttcg 16
Query: 236 aaacggagggagta 249
||||||| ||||||
Sbjct: 15 aaacggatggagta 2
>RF01058;MIR806;AAAA02017191.1/4530-4287 39946:Oryza sativa Indica
Group
Length = 244
Score = 208 bits (105), Expect = 3e-53
Identities = 172/193 (89%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| |||||||| |||||||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct: 15 tttcaaaatgtttaacgccgttgatttttta-gcatatgtttgaccgtttgtcttattca 73
Query: 81 aaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttt 140
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 74 aaaaatttaagtaattattaattttttttctatcatttgattcattgttaaatatatttt 133
Query: 141 catgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaa 200
||| || ||||||||||||||||||| | ||| ||||||||||||| ||| | | |||
Sbjct: 134 tatgtagacatataattttacatattttataaagttttttgaataagacgaatgatcaaa 193
Query: 201 tatgtgctaaaaa 213
||||||||||||
Sbjct: 194 catgtgctaaaaa 206
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| |||||| ||| || ||||||||| ||||||| || |||||||| |
Sbjct: 77 tttttgaataagacaaacggtcaaacatatgctaaaaaatcaacggcgttaaacattttg 18
Query: 236 aaa 238
|||
Sbjct: 17 aaa 15
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||||||||| | ||||||||||||||||||
Sbjct: 206 tttttagcacatgtttgatcattcgtcttattcaaaaaa 168
>RF01058;MIR806;AAAA02023115.1/13802-14036 39946:Oryza sativa Indica
Group
Length = 235
Score = 208 bits (105), Expect = 3e-53
Identities = 184/208 (88%), Gaps = 3/208 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 14 aaatgtttgatgccgttgactttttaa--acatgtttgaccgttcgtcttattcaaaaaa 71
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||
Sbjct: 72 tttaagtaattattaattctttttctatcatttgatttattgttaaatatacttttatgt 131
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| |||||||||||||| |||||| |||||||||| ||||| |||||| |
Sbjct: 132 atacatatagttttacatatttca-taaagttattgaataagacaaacggccaaatatat 190
Query: 206 gctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||||||||||
Sbjct: 191 ttaaaaaagtcaacggcgtcaaacattt 218
Score = 52.0 bits (26), Expect = 4e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||||||| ||| |||| |||||||||||||| ||||||||||
Sbjct: 70 tttttgaataagacgaacggtcaaacatgtt-taaaaagtcaacggcatcaaacattt 14
>RF01058;MIR806;AP008218.1/5770872-5771111 39947:Oryza sativa
Japonica Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 197/225 (87%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| | ||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 1 atactccctccgtccctaaatgtttgacgccgttgacatttttaa-acatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 60 tcgtcttattcaaaaaatttatgtaattattaattattttcctatcatttgtttcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | ||||| ||||||||||||||||||| ||| |||||||
Sbjct: 120 taaatatatttt-atgtatatatatagttttacatatttcacaaaaaaatttaaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||| ||| |||| ||||||||||| | |||||||||||
Sbjct: 179 cgaacggtcaaacatgtataaaaaagtcaacagcgtcaaacattt 223
Score = 58.0 bits (29), Expect = 6e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttatt 78
||||||||||||| |||||| |||| | ||||||||||||||||||||||||
Sbjct: 223 aaatgtttgacgctgttgacttttttat-acatgtttgaccgttcgtcttatt 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||| ||| ||| |||| |||| |||||||| ||||||||||| |
Sbjct: 75 tttttgaataagacgaatggtcaaacatgtttaaaaatgtcaacggcgtcaaacatttag 16
Query: 236 aaacggagggagta 249
||||||||||||
Sbjct: 15 ggacggagggagta 2
>RF01058;MIR806;AAAA02013988.1/6415-6174 39946:Oryza sativa Indica
Group
Length = 242
Score = 208 bits (105), Expect = 3e-53
Identities = 172/193 (89%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||
Sbjct: 50 atgtttgaccgtttgtcttatt-aaaaattttatgtaattattaattcttttcctatcat 108
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||| |
Sbjct: 109 ttgattcattgttaaatatatttatatgtatatatatagttttacatatttcacaaaaat 168
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
||| |||||||| ||||||| ||| || |||| ||||||||||| ||||||| |||| ||
Sbjct: 169 tttcgaataagacgaacggtcaaacatatgcttaaaagtcaacgatgtcaaatatttgga 228
Query: 237 aacggagggagta 249
|||||||||||||
Sbjct: 229 aacggagggagta 241
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| ||||||| ||||||||| ||||||||||||
Sbjct: 242 atactccctccgtttccaaatatttgacatcgttgac-ttttaagcatatgtttgaccgt 184
Query: 69 tcgtcttattcaaaaa 84
||||||||||| ||||
Sbjct: 183 tcgtcttattcgaaaa 168
>RF01058;MIR806;FJ032627.1/93112-93341 4538:Oryza glaberrima
(African rice)
Length = 230
Score = 208 bits (105), Expect = 3e-53
Identities = 191/217 (88%), Gaps = 2/217 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||| |
Sbjct: 1 atactccctccgtttttaaatatttgacgccgttgaccttttaaa-atatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttgttttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcac-aaaagtttttgaataag 187
|||||||| || ||| ||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 120 taaatatacttatatgtgtatatatagttttacatatttcacaaaaagtttttaaataag 179
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgt 224
| ||| ||||||| ||||||||||||| ||||||||
Sbjct: 180 acgaatggttaaacctgtgctaaaaagttaacggtgt 216
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| |||||||| |||||| |||| ||||||||||||||
Sbjct: 43 taaaaggtcaacggcgtcaaatatttaaaaacggagggagta 2
>RF01058;MIR806;AP007226.1/48342-48582 39947:Oryza sativa Japonica
Group
Length = 241
Score = 208 bits (105), Expect = 3e-53
Identities = 159/177 (89%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 48 atgtttgaccgttcgtcttattcataaaatttaagtaattattaattcttttcctataat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||||||| ||| | |||||| |||||||||||||||||||||
Sbjct: 108 ttgatttattgttaaatatatttttatgtatacatatagttttacatatttcacaaaagt 167
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| ||||||| ||| || | |||||||||| ||| ||||| ||||
Sbjct: 168 ttttgaataagacgaacggtcaaacatatttaaaaaagtcaatggtatcaaatattt 224
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||||||||||||
Sbjct: 194 atgtttgaccgttcgtcttattcaaaaa 167
>RF01058;MIR806;AC108761.2/25249-25010 39947:Oryza sativa Japonica
Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 197/225 (87%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| | | |||||||||||||||||||| |||| | | |||||||| |||
Sbjct: 1 atactccctccatccctaaatgtttgacgccgttgactttttgaa-atatgtttgatcgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| |||||||
Sbjct: 60 tcgtcttattcaaaaaaattaagcaattattaatt-ttttcctaccatttgactcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | ||||| ||||||||||||||||||||||||| |||||||
Sbjct: 119 taaatatacttttatgtatatatatagttttacatatttcacaaaagtttttaaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 179 tgaacggttaaacatgttttaaaaagtcaacggcatcaaacattt 223
Score = 44.1 bits (22), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||||| | ||| || | ||||||||||||| |||||||||||
Sbjct: 75 tttttgaataagacgaacgatcaaacatatttcaaaaagtcaacggcgtcaaacattt 18
>RF01058;MIR806;AAAA02009625.1/449-209 39946:Oryza sativa Indica
Group
Length = 241
Score = 208 bits (105), Expect = 3e-53
Identities = 171/193 (88%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||
Sbjct: 48 atgtttgaccgttcgtcttattaaaaaaaattaagtaattattaattatttttctatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 108 ttgatttattgttaaatatatttttatgtatacatatagctttacatatttcataaaagt 167
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||| |||||||| |||||| |||||||||||||||||| || ||| ||||| |||| ||
Sbjct: 168 tttttaataagataaacggtcaaatatgtgctaaaaagtgaatggtatcaaatatttaga 227
Query: 237 aacggagggagta 249
|| | ||||||||
Sbjct: 228 aatgaagggagta 240
>RF01058;MIR806;AAAA02017322.1/13807-13568 39946:Oryza sativa Indica
Group
Length = 240
Score = 206 bits (104), Expect = 1e-52
Identities = 168/188 (89%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct: 46 acatgtttaaccattcgtcttattaaaaaaaattaagtaattattaattcttttcatatc 105
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
||||||||||| |||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct: 106 atttgattcatagttaaatatattttcatgtatacatatagttttacatatttcacaaaa 165
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
|| ||||||||||||||| ||| |||||||||||| |||||||||||||| ||||
Sbjct: 166 aaaatt-aataagatgaacggtcaaacatgtgctaaaaaatcaacggtgtcaaatattta 224
Query: 235 gaaacgga 242
||||||||
Sbjct: 225 gaaacgga 232
Score = 60.0 bits (30), Expect = 2e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| |||||| ||||||| ||||| |||||||||||||||||| |||||
Sbjct: 232 tccgtttctaaatatttgacaccgttgatttttta-gcacatgtttgaccgttcatctta 174
Query: 77 tt 78
||
Sbjct: 173 tt 172
>RF01058;MIR806;AP003928.3/135608-135368 39947:Oryza sativa Japonica
Group
Length = 241
Score = 206 bits (104), Expect = 1e-52
Identities = 166/184 (90%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 50 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaatt-tttttctatcat 108
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||| || ||| | |||||| |||||||||||||| ||||||
Sbjct: 109 ttgatttattgttaaatatacttatatgtatacatatagttttacatatttcataaaagt 168
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||| ||||||| |||| |||||||||||| |||||| |||||||||||||| |||| ||
Sbjct: 169 ttttaaataagacgaacagttaaatatgtg-taaaaaatcaacggtgtcaaatatttaga 227
Query: 237 aacg 240
||||
Sbjct: 228 aacg 231
>RF01058;MIR806;AACV01022814.1/42354-42597 39947:Oryza sativa
Japonica Group
Length = 244
Score = 206 bits (104), Expect = 1e-52
Identities = 161/180 (89%)
Strand = Plus / Plus
Query: 71 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtta 130
|||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||
Sbjct: 65 gtcttattcaaaaaatttaaataattattaattattttcctattatttgattcattattt 124
Query: 131 aatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatg 190
|||||| ||| ||||| |||| |||||||||||||| |||||||||||||||||| |
Sbjct: 125 aatatacttttatgcatatgtatagttttacatatttcataaaagtttttgaataagacg 184
Query: 191 aacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 185 aacggttaaacatgtgctaaaaagtcaacggtgtcaaataaaacgaaacggagggagtac 244
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||||| | |||||| |||||||| ||||| |||||||||| ||||||
Sbjct: 243 tactccctccgtttcgttttatttgacaccgttgacttttta-gcacatgtttaaccgtt 185
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 184 cgtcttattcaaaaa 170
>RF01058;MIR806;AAAA02009423.1/3963-4203 39946:Oryza sativa Indica
Group
Length = 241
Score = 206 bits (104), Expect = 1e-52
Identities = 161/180 (89%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 51 tttgaccgttcgtgttatttaaaaaatttaagtaattattaattcttttcatatcattta 110
Query: 120 attcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttt 179
||||||||||||||||| ||| ||| | |||||||||||||||||| ||||||| |||
Sbjct: 111 attcattgttaaatatacttttatgtatatatataattttacatattttacaaaagattt 170
Query: 180 tgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 239
|||||||||||||| | |||||||||||||||||| || ||||||||| |||| |||||
Sbjct: 171 tgaataagatgaactatcaaatatgtgctaaaaagttaatggtgtcaaatatttagaaac 230
Score = 44.1 bits (22), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||| | ||||||| |||||| | |||||||||||||||| ||| |||| |
Sbjct: 75 tttttaaataacacgaacggtcaaatatatttaaaaaagtcaacggtgtgaaatatttag 16
Query: 236 aaacggagggagta 249
||||| |||||||
Sbjct: 15 aaacgatgggagta 2
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 170/192 (88%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 50 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattctttttatatcatt 109
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
| ||| ||||||||||||| ||||||| | ||||||||||||||||||||| ||||
Sbjct: 110 taatttattgttaaatatactttcatgtacacatataattttacatatttcaaaaaaaaa 169
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||| ||||| | ||||||||||| ||||||||||||||||||||||| ||| |||| ||
Sbjct: 170 tttaaataaaacgaacggttaaacatgtgctaaaaagtcaacggtgttaaatattttaaa 229
Query: 238 acggagggagta 249
||||||||||||
Sbjct: 230 acggagggagta 241
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||| |||| ||| || |||||||| ||||| |||||||||| ||||||
Sbjct: 241 tactccctccgttttaaaatatttaacaccgttgacttttta-gcacatgtttaaccgtt 183
Query: 70 cgtcttatt 78
||| |||||
Sbjct: 182 cgttttatt 174
>RF01058;MIR806;FJ581047.1/253034-252790 4536:Oryza nivara
Length = 245
Score = 206 bits (104), Expect = 1e-52
Identities = 195/224 (87%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||| | ||| ||||||| ||||||| |||| | |||||||||| ||||
Sbjct: 2 tactccctccgtccctgaatatttgacgtcgttgacttttttaa-acatgtttgatcgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 cgttttattcaaaaaattttagtaattattaattcttttcctatcatttaattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||| ||| | || ||| |||||||||||| | |||||||||||||||||||
Sbjct: 121 aaatatatttttatgtatacacatagttttacatattttataaaagtttttgaataagat 180
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||| |||||||| ||||| ||||||| |||||| ||||
Sbjct: 181 gaacggtcaaatatgtttaaaaaattcaacggcgtcaaatattt 224
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||||||||||||| |||| | |||| ||||||||||| |||||||||||||
Sbjct: 224 aaatatttgacgccgttgaattttttaa-acatatttgaccgttcatcttattcaaaaa 167
>RF01058;MIR806;AC133006.6/55905-56146 39947:Oryza sativa Japonica
Group
Length = 242
Score = 206 bits (104), Expect = 1e-52
Identities = 211/243 (86%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgac-attttaagcacatgtttgaccg 67
|||||| |||| |||| |||| |||||| |||||||| ||||||| |||| ||||||||
Sbjct: 1 atactctctccatttctaaatatttgacaccgttgaccattttaa--acatatttgaccg 58
Query: 68 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||
Sbjct: 59 ttcgtcttattcaaaaaatttaagtaattattaatttttttcctattatttgatttattg 118
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||| ||| ||| | ||||| ||||| |||||| |||||||||||||||||||
Sbjct: 119 ttaaatatacttttatgtatatatatagttttatatatttaacaaaagtttttgaataag 178
Query: 188 atgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
| ||||||| ||| ||||||| ||||||| || | ||||||| |||| |||||| || ||
Sbjct: 179 acgaacggtcaaacatgtgctaaaaaagttaatgatgtcaaatatttagaaacgaagaga 238
Query: 247 gta 249
|||
Sbjct: 239 gta 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| || |||||| |||| |||||| | || || |||| |||||||||||||||||
Sbjct: 242 atactctcttcgtttctaaatatttgacatcattaacttttttagcacatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| |||||||| ||| ||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaatatgtttaaaatggtcaacggtgtcaaatatttag 16
Query: 236 aaacggagggagta 249
||| |||| |||||
Sbjct: 15 aaatggagagagta 2
>RF01062;MIR812;AAAA02021006.1/255-85 39946:Oryza sativa Indica
Group
Length = 171
Score = 204 bits (103), Expect = 4e-52
Identities = 153/167 (91%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 168 tttttagcacatgtttgaccgttcgtcttatttaaaaaatttaagtaattattaattctt 109
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|||| ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||||||
Sbjct: 108 ttccaatcatttgatttattgttaaatatatttttatgtaggcttataattctacatatt 49
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaa 213
| ||||||| |||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 48 ttacaaaag-ttttgaataaga-gaacggtcaaacatgtgcttaaaa 4
Score = 58.0 bits (29), Expect = 6e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||||||||||||||||||||||| ||||||||||||
Sbjct: 4 ttttaagcacatgtttgaccgttc-tcttattcaaaa 39
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaa 213
||||| ||||||| ||||||| ||| ||||||||||||
Sbjct: 131 tttttaaataagacgaacggtcaaacatgtgctaaaaa 168
>RF01062;MIR812;AAAA02013793.1/8450-8621 39946:Oryza sativa Indica
Group
Length = 172
Score = 204 bits (103), Expect = 4e-52
Identities = 133/143 (93%)
Strand = Plus / Minus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctat 113
|||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 162 cacatgtttgaccgtttgtcttattcaaaaactttaagtcattattaattcttttcctat 103
Query: 114 catttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaa 173
||||||||| ||||||||||||||||| ||| |||||||| |||||| |||| |||||||
Sbjct: 102 catttgatttattgttaaatatatttttatgtaggcatattattttatatatctcacaaa 43
Query: 174 agtttttgaataagatgaacggt 196
||||||||||||||| |||||||
Sbjct: 42 agtttttgaataagacgaacggt 20
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 56 catgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||||||||||
Sbjct: 12 catgtttgaccgttcgtcttattcaaaaa 40
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 172 aaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||||| |||||| ||| ||||| |||||||||
Sbjct: 128 aaagtttttgaataagacaaacggtcaaacatgtgataaaaagtc 172
>RF01062;MIR812;AC112209.4/81487-81659 39947:Oryza sativa Japonica
Group
Length = 173
Score = 204 bits (103), Expect = 4e-52
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||| ||
Sbjct: 160 atgtttgaccgttcgtcttatttaaaaaatttaaataattattacatcttttcgtattat 101
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||||||||||||| || ||| || ||||||||||||||||||||||||||||
Sbjct: 100 ttgattcattgttaaatatatctttatgtagacatataattttacatatttcacaaaagt 41
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagt 215
|||||||||||| ||||||| ||| |||| |||||||||
Sbjct: 40 ttttgaataagacgaacggtcaaacatgtactaaaaagt 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||||||||||||||
Sbjct: 12 acatgtttgaccgttcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02035051.1/4587-4416 39946:Oryza sativa Indica
Group
Length = 172
Score = 204 bits (103), Expect = 4e-52
Identities = 146/159 (91%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 159 atgtttgaccgttcgtcttattcaaattttttaagtaattattaattattttcctatcat 100
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 99 ttgatttattattaaatatatttt-atgtaggcatataatttttcatatttcacaaaagt 41
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagt 215
|||| ||||||| ||||||| ||| ||||||||||||||
Sbjct: 40 ttttaaataagacgaacggtcaaacatgtgctaaaaagt 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||||||||||||||| |||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttatttaaaaa 41
>RF01058;MIR806;AC092389.4/56062-56303 39947:Oryza sativa Japonica
Group
Length = 242
Score = 204 bits (103), Expect = 4e-52
Identities = 204/235 (86%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| || |||||||||| | |||||| | ||||||||||||
Sbjct: 1 atactccctccgtttctaaatattcgacgccgttgtctttttaaa-atatgtttgaccgt 59
Query: 69 tcgtcttattcaa-aaaatttaagtaattattaattcttttcctatcatttgattcattg 127
||||||||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 60 tcgtcttattcaacaaaatttaactaattattaatttttttcctatcatttgatttattg 119
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||| || ||| | |||||| |||||||||||||| |||| |||||||||
Sbjct: 120 ttaaatatacttatatgtatacatatagttttacatatttcaaaaaaaaaattgaataag 179
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
| | |||| ||| ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 180 acaagcggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacgga 234
Score = 65.9 bits (33), Expect = 3e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| |||||| |||||||| ||||| ||||||||||||||| | ||||||
Sbjct: 234 tccgtttctaaatatttgacaccgttgacttttta-gcacatgtttgaccgcttgtctta 176
Query: 77 ttcaa 81
|||||
Sbjct: 175 ttcaa 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 179 ttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
|||||||||| ||||||| ||| || | ||||||| |||||| ||| || |||| ||||
Sbjct: 72 ttgaataagacgaacggtcaaacatattttaaaaagacaacggcgtcgaatatttagaaa 13
Query: 239 cggagggagta 249
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AP004140.3/16042-16282 39947:Oryza sativa Japonica
Group
Length = 241
Score = 204 bits (103), Expect = 4e-52
Identities = 200/231 (86%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| ||||||||| | || |||| | | | |||| ||| |
Sbjct: 1 atactccctccgtttctaaatatttgacgccatcgatttttttaa-atacgtttaaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| || ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 60 tagtattatttaaaaaatttaagtaattattaattctttttctatcatttgatttattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| || ||| | |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 120 taaatatacttatatgtatacatatagttttacatatttcacaaaagtttttgaaaaaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 239
|||||| ||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 180 caaacggtcaaatatgtgctaaaaagtcaacggtgtcaaatatttagaaac 230
>RF01058;MIR806;AC136787.4/71986-72222 39947:Oryza sativa Japonica
Group
Length = 237
Score = 204 bits (103), Expect = 4e-52
Identities = 204/234 (87%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| |||| ||||||||||||||| |||| | |||||||||| | ||| ||
Sbjct: 6 ccctccgtttctaaatatttgacgccgttgacttttttaa-acatgtttgatcattcatc 64
Query: 74 ttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaat 133
||||| |||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 65 ttattgaaaaaaattaagtgattattaattattttcttatcatttgattcattgttaaat 124
Query: 134 atattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaac 193
||| ||||||| | ||||| ||||||||||||||| || ||||| ||||||| |||
Sbjct: 125 atactttcatgtatatatatagttttacatatttcac--aacttttttaataagacgaat 182
Query: 194 ggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
||| |||||||| | |||||||||||||||||||||||||| ||||||||||||
Sbjct: 183 ggtcaaatatgtacgtaaaaagtcaacggtgtcaaacatttagaaacggaggga 236
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| ||||||||||| |||||||| ||||| | |||| ||||||| |||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttacgtacatatttgaccattcgt 177
Query: 73 cttattcaaaaa 84
|||||| |||||
Sbjct: 176 cttattaaaaaa 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||||||| | | ||| |||| ||||||||||||| |||||| |||| |
Sbjct: 75 tttttcaataagatgaatgatcaaacatgtttaaaaaagtcaacggcgtcaaatatttag 16
Query: 236 aaacggaggg 245
||||||||||
Sbjct: 15 aaacggaggg 6
>RF01058;MIR806;AAAA02019059.1/8776-9013 39946:Oryza sativa Indica
Group
Length = 238
Score = 204 bits (103), Expect = 4e-52
Identities = 207/238 (86%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||| ||||||| | || || |||| | |||||||||| |
Sbjct: 1 atactccctccatttctaaatatttgacgtcatttacttttttaa-acatgtttgatgat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 60 tcgtcttattaaaaaaatt-aagtaattattaattcttttcctatcattcgattcgttgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | |||||| |||| ||||||||||||| | ||| |||||||
Sbjct: 119 taaatatactttcatgtatacatatagttttccatatttcacaaa--tattttaataaga 176
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggaggga 246
||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 177 cgaacggttaaacatgtgctaaaaaatcaacggtgtcaaacatttagaaacggaggga 234
Score = 75.8 bits (38), Expect = 3e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||
Sbjct: 234 tccctccgtttctaaatgtttgacaccgttgatttttta-gcacatgtttaaccgttcgt 176
Query: 73 cttatt 78
||||||
Sbjct: 175 cttatt 170
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 204 bits (103), Expect = 4e-52
Identities = 201/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 20 gtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattc 79
||||| |||| ||||| | ||||||| |||||| | |||||||||| |||| ||||||
Sbjct: 12 gtttctaaatatttgatgacgttgactttttaaa-atatgtttgaccattcgccttatta 70
Query: 80 aaaaaat-ttaagtaattattaattcttttcctatcatttgattcattgttaaatatatt 138
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| |
Sbjct: 71 aaaaaaaattaagtaattattaattatttttctatcatttgattcattgttaaatatagt 130
Query: 139 ttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggtta 198
|||||| | |||||| ||||||||||||||||||| ||||| ||||| | ||||||| |
Sbjct: 131 ttcatgtatacatatagttttacatatttcacaaaattttttaaataaaacgaacggtca 190
Query: 199 aatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
| ||||||||||||||||||| |||||||||||| ||||||||| |||||
Sbjct: 191 agcatgtgctaaaaagtcaacgatgtcaaacatttagaaacggagagagta 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| ||||||||||| ||||||| ||||| ||||||| |||||||||
Sbjct: 241 tactctctccgtttctaaatgtttgacatcgttgacttttta-gcacatgcttgaccgtt 183
Query: 70 cgtcttattcaaaaaattt 88
||| ||||| |||||||||
Sbjct: 182 cgttttatttaaaaaattt 164
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 204 bits (103), Expect = 4e-52
Identities = 210/242 (86%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||| ||||||||||||||| |||| | |||| ||||| |||
Sbjct: 1 atactccctccgtttttaaatatttgacgccgttgacttttttaa-acatatttgatcgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |
Sbjct: 60 ttgtcttatttaaaaaatttaagtcattattaattcttttcgtatcatttgattcattat 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
||||||| |||||| | |||| | |||||||||||| ||||| ||||| |||||||
Sbjct: 120 aaaatatactttcatatacacataaagttttacatattt--caaaatttttttaataaga 177
Query: 189 tgaacggttaaata-tgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
||||||||||| | ||| ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 178 cgaacggttaaacattgtactaaaaagttaacggtgtcaaacattttgaaacggagggag 237
Query: 248 ta 249
||
Sbjct: 238 ta 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcac-atgtttgaccg 67
|||||||||||||||| ||||||||||| ||||| || |||| || || |||||| ||||
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttaac-tttttagtacaatgtttaaccg 182
Query: 68 ttcgtcttattcaaaaaattt 88
||||||||||| |||||||||
Sbjct: 181 ttcgtcttattaaaaaaattt 161
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| |||| | |||||||| ||||||||||||| |||||| ||||
Sbjct: 75 tttttaaataagacaaacgatcaaatatgtttaaaaaagtcaacggcgtcaaatatttaa 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 204 bits (103), Expect = 4e-52
Identities = 210/242 (86%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| ||| ||| |||| ||||||| ||||||| |||||| |||| |||||| |
Sbjct: 1 atactccatccatttttaaatatttgacgtcgttgactttttaaa-acatatttgactat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| |||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 60 ttgtcttattaaaaaa--ttaagaaattattaattcttttcctatcatttgatttattgt 117
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | |||||| ||||||||||||||| || |||||||||||||
Sbjct: 118 taaatatacttttatgtatacatatagttttacatatttcac-aatttttttgaataaga 176
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||
Sbjct: 177 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacggagagagt 236
Query: 249 ac 250
||
Sbjct: 237 ac 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| |||| |||||| |||||||| ||||| |||||||||| ||||||
Sbjct: 237 tactctctccgtttctaaatatttgacaccgttgacttttta-gcacatgtttaaccgtt 179
Query: 70 cgtcttattcaaaaaa 85
||||||||||||||||
Sbjct: 178 cgtcttattcaaaaaa 163
>RF01062;MIR812;AAAA02014984.1/302-128 39946:Oryza sativa Indica
Group
Length = 175
Score = 202 bits (102), Expect = 2e-51
Identities = 149/162 (91%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 162 atgtttgaccgttcgtcttattcaaaaaatttaggtaattattaattctttttctatcat 103
Query: 117 ttgattcattgttaa-atatattttcatgcaggcatataa-ttttacatatttcacaaaa 174
|||||||||||| || ||||||||| ||| |||||||||| |||||||||| ||||||||
Sbjct: 102 ttgattcattgtgaagatatatttttatgtaggcatataagttttacatatctcacaaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||| ||| ||| ||| ||||| |||||||||
Sbjct: 42 gtttttgaataagacgaatggtcaaacatgtggtaaaaagtc 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||| |||||||||||||||||
Sbjct: 11 cacatgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02007625.1/3126-3298 39946:Oryza sativa Indica
Group
Length = 173
Score = 202 bits (102), Expect = 2e-51
Identities = 156/172 (90%), Gaps = 4/172 (2%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaa--tttaagtaattattaattc 104
|||| |||||||||||||||||||||||||||||||||| | ||||||||||||| ||
Sbjct: 170 tttttagcacatgtttgaccgttcgtcttattcaaaaaaaatataagtaattattatttt 111
Query: 105 ttttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacata 164
||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||
Sbjct: 110 ttt--ctatcatttgattcattattaaatatatttttatgtagacatataattttacata 53
Query: 165 tttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||||||||| ||||||| ||| ||||| |||||||||
Sbjct: 52 tttcacaaaagtttttgaataagacgaacggtcaaacatgtgataaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 cacatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||||||||||||||
Sbjct: 11 cacatgtttgaccgttcgtcttattcaaaaa 41
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 133 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 173
>RF01062;MIR812;AACV01022183.1/14192-14020 39947:Oryza sativa
Japonica Group
Length = 173
Score = 202 bits (102), Expect = 2e-51
Identities = 153/170 (90%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
|||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 170 tttttagcacatgtttgagtattcgtcttattcaaaaaattcaagtaattattaattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
|| ||||||||| ||| ||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 110 tttctatcatttaatttattgttaaatatacttttatgtaggcatataattttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||| |||||||||||||||||| || ||| ||| |||||||||||||||
Sbjct: 50 tcataaaagtttttgaataagacaaatggtcaaacatgtgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||| || ||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccatttgtcttattcaaaaa 41
>RF01062;MIR812;AP008208.1/3561428-3561256 39947:Oryza sativa
Japonica Group
Length = 173
Score = 202 bits (102), Expect = 2e-51
Identities = 129/138 (93%)
Strand = Plus / Minus
Query: 68 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 149 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgatctattg 90
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||||||| ||| | |||||| ||||||||||||| ||||||||||||||||||
Sbjct: 89 ttaaatatatttttatgtatacatatagttttacatatttctcaaaagtttttgaataag 30
Query: 188 atgaacggttaaatatgt 205
| ||||||||||||||||
Sbjct: 29 acgaacggttaaatatgt 12
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||| ||| |||||||||||||||||||||
Sbjct: 12 acatatttaaccgttcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02032117.1/15688-15455 39946:Oryza sativa Indica
Group
Length = 234
Score = 202 bits (102), Expect = 2e-51
Identities = 185/210 (88%), Gaps = 2/210 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||| |||||||| |||||| |||| | |||||||||||| |
Sbjct: 1 atactccctccatttctaaatatttgacgctgttgacttttttaa-acatgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||| ||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 60 tcgttttattcaaaaattttaagtaaatattaattattttcctatcatttgat-cattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | ||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 119 taaatatacttttatgtatacatataattttacgtgtttcacaaaagtttttggataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaa 218
||||||||||| ||| |||||||||||||
Sbjct: 179 cgaacggttaaacatgcgctaaaaagtcaa 208
Score = 44.1 bits (22), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||| | ||| ||| ||| |||| ||||||||||| | |||||| |||| |
Sbjct: 75 tttttgaataaaacgaatggtcaaacatgtttaaaaaagtcaacagcgtcaaatatttag 16
Query: 236 aaacggagggagta 249
||| ||||||||||
Sbjct: 15 aaatggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||| ||||||| |||||||||||||| ||||||
Sbjct: 203 tttttagcgcatgtttaaccgttcgtcttatccaaaaa 166
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 206/240 (85%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||| ||||| |||| ||||||| ||||||| || | | |||||||||| ||
Sbjct: 2 tactccctctgtttctaaatatttgacgtcgttgactttc---gtaaatgtttgaccatt 58
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||| |||||||||| || |||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 59 cgttttattcaaaatatctaagtaattattaattatttttatatcatttgattcattttt 118
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| || ||| | ||||||| |||||||||||| | |||||||| |||||||||
Sbjct: 119 aaatatacttatatgtatgcatatagttttacatattttataaaagtttctgaataagac 178
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| ||| |||||| |||||||||||||||||||| |||| |||||||||||||||
Sbjct: 179 gaacggtcaaacatgtgccaaaaagtcaacggtgtcaaatatttagaaacggagggagta 238
Score = 87.7 bits (44), Expect = 7e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| |||| ||||||||||||||||
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttg-gcacatgtttgaccgt 181
Query: 69 tcgtcttattca 80
||||||||||||
Sbjct: 180 tcgtcttattca 169
>RF01058;MIR806;AP008208.1/31541510-31541755 39947:Oryza sativa
Japonica Group
Length = 246
Score = 202 bits (102), Expect = 2e-51
Identities = 153/170 (90%)
Strand = Plus / Plus
Query: 80 aaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatattt 139
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 76 aaaaaaattaaataattattaattcttttcctatcatttgattcattgttaaatatactt 135
Query: 140 tcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaa 199
| ||| || |||||||||| |||||||||||| || |||| ||||||| |||||||||
Sbjct: 136 ttatgtagacatataatttcacatatttcacacaaattttcaaataagacaaacggttaa 195
Query: 200 atatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
| |||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 196 acatgtgctaaaaagtcaacggtgccaaatatttagaaacggagggagta 245
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||| | |||||||| |||| ||||||||||| ||||||
Sbjct: 245 tactccctccgtttctaaatatttggcaccgttgac-tttttagcacatgtttaaccgtt 187
Query: 70 cgtcttatt 78
||||||||
Sbjct: 186 tgtcttatt 178
>RF01058;MIR806;AP008207.1/17336421-17336659 39947:Oryza sativa
Japonica Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 166/186 (89%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||| |||||||||| || ||||||||||||||||||||||||||||| |||||||
Sbjct: 45 atgtttgatcgttcgtcttgtttaaaaaatttaagtaattattaattctttttctatcat 104
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag- 175
|||||||||||||||||||| || |||| | ||||| ||||||||||||||||||||
Sbjct: 105 ttgattcattgttaaatatacttacatgtataaatatagttttacatatttcacaaaagt 164
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||| ||| ||||| |||||||| |||| ||||||| |||| |
Sbjct: 165 tttttgaataagacgaacggtcaaacatgtgataaaaagttaacgatgtcaaatatttag 224
Query: 236 aaacgg 241
||||||
Sbjct: 225 aaacgg 230
Score = 65.9 bits (33), Expect = 3e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| || ||||||| |||| |||||| |||| || ||||| |||||||||||||||
Sbjct: 239 atacttcccccgtttctaaatatttgacatcgttaactttttat-cacatgtttgaccgt 181
Query: 69 tcgtcttattcaaaaaa 85
|||||||||||||||||
Sbjct: 180 tcgtcttattcaaaaaa 164
>RF01058;MIR806;AAAA02010716.1/25316-25560 39946:Oryza sativa Indica
Group
Length = 245
Score = 202 bits (102), Expect = 2e-51
Identities = 214/247 (86%), Gaps = 7/247 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||||||||||| |||| | | | ||||||||||
Sbjct: 1 atactccctccgtttctaaatatttgacgccgttgatttttttaa-atacgtttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattatta---attcttttcctatcatttgattcat 125
|||||||||| ||||| ||||||| ||||||| ||||||||||||| |||||||||||
Sbjct: 60 tcgtcttatttaaaaattttaagttattattattaattcttttcctataatttgattcat 119
Query: 126 tgttaaatatat--tttcatgcaggcatataattttacatatttcacaaaagtttttgaa 183
| |||||||||| || ||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 120 tattaaatatatacttatatgcatacatataattttacatatttcacaaa-gttttttaa 178
Query: 184 taagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggag 243
||| ||||||||||| ||||||||||||||||||||| ||||| |||| |||||| ||
Sbjct: 179 taaagcgaacggttaaacatgtgctaaaaagtcaacggtatcaaatatttagaaacgaag 238
Query: 244 ggagtac 250
|||||||
Sbjct: 239 ggagtac 245
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||| |||||| |||| ||||| |||||||| ||||| |||||||||| ||||||
Sbjct: 244 tactcccttcgtttctaaatatttgataccgttgacttttta-gcacatgtttaaccgtt 186
Query: 70 cgtcttattcaaaaa 84
|| ||||| |||||
Sbjct: 185 cgctttattaaaaaa 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| ||||||| |||||| |||| |||||||||||||||
Sbjct: 42 aaaaaatcaacggcgtcaaatatttagaaacggagggagta 2
>RF01058;MIR806;AACV01019673.1/9923-9682 39947:Oryza sativa Japonica
Group
Length = 242
Score = 202 bits (102), Expect = 2e-51
Identities = 172/194 (88%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 48 atgtttgaccgttcgtcttattcaaaaatattaagtaattattaattctttttctatcat 107
Query: 117 ttg-attcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag 175
|| ||||||||||||||||| ||| ||| | |||||| || |||||||||||||||||
Sbjct: 108 ttttattcattgttaaatatacttttatgtatacatatagttatacatatttcacaaaag 167
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
|||||| |||| | ||||||| ||| |||||||| |||||| ||||| |||||||||| |
Sbjct: 168 tttttgtataaaacgaacggtcaaacatgtgctacaaagtctacggtatcaaacatttag 227
Query: 236 aaacggagggagta 249
||| ||||||||||
Sbjct: 228 aaatggagggagta 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||||||||| |||| ||| || || ||||||||||||||||
Sbjct: 242 atactccctccatttctaaatgtttgataccgtagactttgta-gcacatgtttgaccgt 184
Query: 69 tcgtcttattcaaaaa 84
|||| |||| ||||||
Sbjct: 183 tcgttttatacaaaaa 168
>RF01058;MIR806;AP008209.1/27425695-27425457 39947:Oryza sativa
Japonica Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 167/186 (89%), Gaps = 2/186 (1%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttt-cctatca 115
|||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||
Sbjct: 49 atgtttgaccgttcgtcttatt-aaaaaatttaagtaattattaattttttttcctatca 107
Query: 116 tttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaag 175
||||||||||||||||||||| || ||| | |||||| || ||||||||| |||||||
Sbjct: 108 tttgattcattgttaaatatacttatatgtatacatatagttctacatattttacaaaag 167
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||||||| || |||| ||||||||||||||||||| |||| |
Sbjct: 168 ttttttaataagacgaacggttaaacatatgctgaaaagtcaacggtgtcaaatatttag 227
Query: 236 aaacgg 241
||||||
Sbjct: 228 aaacgg 233
Score = 61.9 bits (31), Expect = 4e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 18 ccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttat 77
||||||| |||| |||||| |||||||| |||| |||| |||||| ||||||||||||||
Sbjct: 233 ccgtttctaaatatttgacaccgttgac-ttttcagcatatgtttaaccgttcgtcttat 175
Query: 78 tcaaaaa 84
| |||||
Sbjct: 174 taaaaaa 168
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 202 bits (102), Expect = 2e-51
Identities = 203/233 (87%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| ||||||||| ||||||||||| |||||||||||||| | | | ||| ||| ||
Sbjct: 2 tactcactccgtttcaaaatgtttgacaccgttgacatttta-gtatgtatttaaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
| ||||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||
Sbjct: 61 tattttattaaaaaaatttaagtaattatttattcttttcatat-atttgattcattgtt 119
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||||| | ||| || |||||||||||||||||| ||||| ||||||||
Sbjct: 120 aaatatactttcatgtacacatgtagttttacatatttcacaaa--ttttttaataagat 177
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 178 gaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 230
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| ||||||||||| |||||||| |||| ||||||||||||||| ||| |||||
Sbjct: 230 tccgtttcaaaatgtttgacaccgttgac-tttttagcacatgtttgaccattcatctta 172
Query: 77 ttcaaaaa 84
|| |||||
Sbjct: 171 ttaaaaaa 164
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||| || || ||||||||| | |||||| |||||||||||||||||||| |
Sbjct: 75 ttttttaataaaataaatggttaaatacatactaaaatgtcaacggtgtcaaacattttg 16
Query: 236 aaacggagggagtac 250
|||||||| ||||||
Sbjct: 15 aaacggagtgagtac 1
>RF01058;MIR806;AL731600.3/124104-123868 39947:Oryza sativa Japonica
Group
Length = 237
Score = 202 bits (102), Expect = 2e-51
Identities = 189/218 (86%)
Strand = Plus / Plus
Query: 11 actccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttc 70
|||||||||||||| |||| ||||||||||||||| |||| | || |||||| |||
Sbjct: 1 actccctccgtttctaaatatttgacgccgttgactttttttaaatatatttgactattc 60
Query: 71 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtta 130
|| |||||||||||||||||||||||||||||| || |||||||||||||||| |||||
Sbjct: 61 gttttattcaaaaaatttaagtaattattaatttgttccctatcatttgattcactgtta 120
Query: 131 aatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatg 190
|||||| || ||| | |||||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 121 aatatacttatatgtatacatatagttttatatatttcacaaaagtttttaaataagatg 180
Query: 191 aacggttaaatatgtgctaaaaagtcaacggtgtcaaa 228
|| ||| ||| ||||| |||||||||||||||||||||
Sbjct: 181 aatggtcaaacatgtgttaaaaagtcaacggtgtcaaa 218
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 40 aaaaagtcaacggcgtcaaatatttagaaacggagggagt 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 31 tttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||| |||||||| |||||| ||||||||||||| ||| ||||||| |||||
Sbjct: 218 tttgacaccgttgactttttaa-cacatgtttgaccattcatcttatttaaaaa 166
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 210/242 (86%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||| | |||| ||||||||||| ||||| || ||||| | || ||||||||| |
Sbjct: 1 atactcccttcatttcaaaatgtttgacaccgttcacttttta-gtacgtgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 60 tcgtcttattcaacaaatttaagtaattatttattctttta-tatcatttgattcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||||||| | |||||| ||||||||||||||| || ||||| |||||||
Sbjct: 119 taaatatattttcatgtacacatatagttttacatatttcac-aattttttttaataaga 177
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||||||| || | ||||||||| |||||| ||||| |||| ||| ||||||| ||
Sbjct: 178 cgaacggttaaacatatactaaaaagttaacggtatcaaatattttgaagcggagggtgt 237
Query: 249 ac 250
||
Sbjct: 238 ac 239
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 179 ttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
|||||||||| ||| ||| ||| | || ||||||||| ||||||||||||||||| ||||
Sbjct: 72 ttgaataagacgaatggtcaaacacgtactaaaaagtgaacggtgtcaaacattttgaaa 13
Query: 239 cggagggagta 249
| ||||||||
Sbjct: 12 tgaagggagta 2
>RF01058;MIR806;AAAA02015480.1/17515-17756 39946:Oryza sativa Indica
Group
Length = 242
Score = 202 bits (102), Expect = 2e-51
Identities = 159/178 (89%)
Strand = Plus / Plus
Query: 72 tcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaa 131
||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 64 tcttatttaaaaaaattaagtaattattaattcttttcctatcacttgattcattgttaa 123
Query: 132 atatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatga 191
||||| || || | ||||||| |||||||||||||| |||||||||||||||||| ||
Sbjct: 124 atatagttatatatatgcatatagttttacatatttcataaaagtttttgaataagacga 183
Query: 192 acggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| ||| || |||||||||||||| ||||||||| |||| |||| ||||||||||
Sbjct: 184 acggtcaaacatatgctaaaaagtcaatggtgtcaaatatttagaaatggagggagta 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||| |||||| || ||||| ||||| ||| ||||||||||||
Sbjct: 242 atactccctccatttctaaatatttgacaccattgacttttta-gcatatgtttgaccgt 184
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 183 tcgtcttattcaaaaa 168
>RF01062;MIR812;AAAA02020579.1/3699-3527 39946:Oryza sativa Indica
Group
Length = 173
Score = 200 bits (101), Expect = 7e-51
Identities = 143/157 (91%)
Strand = Plus / Minus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 101
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| || ||| | |||||| |||||||||||||| ||||||
Sbjct: 100 ttgattcattgttaaatatacttatatgtatacatatagttttacatatttcataaaagt 41
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaa 213
|||| ||||||| ||||||| ||| || |||| ||||
Sbjct: 40 ttttaaataagacgaacggtcaaacatatgcttaaaa 4
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||| |||||||||||||||||||||| |||||
Sbjct: 4 ttttaagcatatgtttgaccgttcgtcttatttaaaaa 41
>RF01058;MIR806;AAAA02027729.1/13846-13614 39946:Oryza sativa Indica
Group
Length = 233
Score = 200 bits (101), Expect = 7e-51
Identities = 185/209 (88%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| |||| | | ||||||||||||| |||||||||||||||
Sbjct: 11 aaatgtttgacgccgttgacttttttaa-atatgtttgaccgtttgtcttattcaaaaaa 69
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 70 tttaagcaattattaattcttttcctaccatttgattcattgttaaatatacttttatgt 129
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| |||||||||||||| |||||||||| ||||||| ||||||| ||| ||||
Sbjct: 130 atacatatagttttacatatttcataaaagtttttaaataagacgaacggtcaaacatgt 189
Query: 206 gctaaaaag-tcaacggtgtcaaacattt 233
||||||| ||||||| || ||||||||
Sbjct: 190 -ttaaaaagatcaacggcgttaaacattt 217
Score = 58.0 bits (29), Expect = 6e-08
Identities = 54/60 (90%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttga-cattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||||| |||||||||| | |||||| |||||||||||||||||||||||| |||||
Sbjct: 217 aaatgtttaacgccgttgatctttttaa--acatgtttgaccgttcgtcttatttaaaaa 160
Score = 44.1 bits (22), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||||| ||| || | ||||||||||||| |||||||||||
Sbjct: 68 tttttgaataagacaaacggtcaaacatatttaaaaaagtcaacggcgtcaaacattt 11
>RF01058;MIR806;AAAA02021700.1/37305-37064 39946:Oryza sativa Indica
Group
Length = 242
Score = 200 bits (101), Expect = 7e-51
Identities = 208/241 (86%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||| |||| |||| ||||||||||||||| |||| | | |||||||||| ||
Sbjct: 2 tactccctccatttctaaatatttgacgccgttgacttttttaa-atatgtttgaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 61 tgtcttattgaaacaatttaagtaattattaatttttttcatatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||| ||| || |||||| |||||||||||| |||||||||||| ||||| |
Sbjct: 121 aaatatatttttatgtagacatatagttttacatattttacaaaagtttttaaataatac 180
Query: 190 gaacggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||| || ||| || | | |||||||| ||||||| |||| |||| ||||||||||||||
Sbjct: 181 gaaaagtcaaacattttcttaaaaagttaacggtgccaaatatttagaaacggagggagt 240
Query: 249 a 249
|
Sbjct: 241 a 241
Score = 56.0 bits (28), Expect = 3e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||| | ||||| || ||||||| | ||||||||| |
Sbjct: 242 atactccctccgtttctaaatatttggcaccgttaactttttaagaaaatgtttgacttt 183
Query: 69 tcgtcttattcaaaaa 84
|||| ||||| |||||
Sbjct: 182 tcgtattatttaaaaa 167
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||||| |||||| |||| |||| ||||||||||
Sbjct: 42 aaaaagtcaacggcgtcaaatatttagaaatggagggagta 2
>RF01058;MIR806;AAAA02021990.1/8223-7984 39946:Oryza sativa Indica
Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 195/225 (86%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| |||| | | ||||||||||||||| ||||||||||||
Sbjct: 17 aaatgtttgacgccgttgacttttttaac-catgtttgaccgttcaccttattcaaaaag 75
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||
Sbjct: 76 tttaagtaattattaattcttttcatatcatttgatttattgttaaatatacttttatgt 135
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
||||| |||||| |||||||||| ||||||||||||||| ||||||| ||||||||
Sbjct: 136 ttatatatagttttacgtatttcacaagagtttttgaataagacgaacggtcaaatatgt 195
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
||||||||||||| |||||| |||| | ||| |||||||||
Sbjct: 196 ttaaaaaagtcaacggcgtcaaatatttagggacgaagggagtac 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||| |||| | |||| |||||||||||||||||||||||||
Sbjct: 223 aaatatttgacgccgttgacttttttaa-acatatttgaccgttcgtcttattcaaaaa 166
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| |||||||| ||| ||| ||||||||||||| |||||||||||
Sbjct: 74 tttttgaataaggtgaacggtcaaacatggttaaaaaagtcaacggcgtcaaacattt 17
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 200 bits (101), Expect = 7e-51
Identities = 168/189 (88%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 48 atgtttgaccattcgtcttattaaaaaaaattaagtaattattaattctttccctatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|| ||||||| ||||||||| ||||||| | |||||| ||||||||||||||| ||| |
Sbjct: 108 ttaattcattattaaatatactttcatgtatacatatagttttacatatttcac-aaatt 166
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||| ||||||| || ||| ||| ||||||||||||| |||||||||||||||||| ||
Sbjct: 167 tttttaataagacaaatggtcaaacatgtgctaaaaagccaacggtgtcaaacatttaga 226
Query: 237 aacggaggg 245
|||||||||
Sbjct: 227 aacggaggg 235
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| ||||||||||| |||||| | ||||| |||||||||||||| || |||
Sbjct: 235 ccctccgtttctaaatgtttgacaccgttggcttttta-gcacatgtttgaccatttgtc 177
Query: 74 ttattcaaaaaattt 88
||||| |||||||||
Sbjct: 176 ttattaaaaaaattt 162
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 200 bits (101), Expect = 7e-51
Identities = 207/240 (86%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||| |||| |||||| |||||||| ||||||| | | ||||||| ||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccatt 61
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattatttttatat-atttgatttattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||||||| ||| | |||||| |||||||||||||||||| |||| ||||| |
Sbjct: 121 aaatatattttaatgtacacatatagttttacatatttcacaaa--ctttttaataaaac 178
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||| ||||| |||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 179 gaacggttaaacatgtgttaaaaagttaacggtgtcaaacattttaaaatggagggagta 238
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||||||||||| ||| ||| ||||| | || |||||||||||||||||||| ||||
Sbjct: 76 tttttgaataagacgaatggtcaaatacatacttaaaaagtcaacggtgtcaaatatttt 17
Query: 235 gaaacggagggagta 249
||||||||||||||
Sbjct: 16 aaaacggagggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| ||| ||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 239 atactccctccattttaaaatgtttgacaccgttaactttttaa-cacatgtttaaccgt 181
Query: 69 tcgtcttattcaaaa 83
|||| ||||| ||||
Sbjct: 180 tcgttttattaaaaa 166
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 200/229 (87%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| ||||| |||||||| ||||| | |||||||||||| ||
Sbjct: 2 tactccctccgtttcaaaatatttgataccgttgacttttta-gtacatgtttgaccatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||
Sbjct: 61 cgtcttatt-aaaaaatttaagtaattatttattcttttcatattatttgattcattgtt 119
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||| | | |||||| ||||||||||||||| || ||||| |||||||
Sbjct: 120 aaatatactttcaagtacacatatagttttacatatttcac-aattttttttaataagac 178
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaa 238
||||||| |||||| ||||||||||||||| | || |||||||| ||||
Sbjct: 179 gaacggtcaaatatatgctaaaaagtcaactgcgttaaacattttgaaa 227
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||| ||| ||| |||| |||||||||||||||| ||||| |||| |
Sbjct: 75 ttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatattttg 16
Query: 236 aaacggagggagtac 250
|||||||||||||||
Sbjct: 15 aaacggagggagtac 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| |||||||| |||| |||||| ||||| ||| || ||||||||||||||||||| |
Sbjct: 227 tttcaaaatgtttaacgcagttgacttttta-gcatatatttgaccgttcgtcttattaa 169
Query: 81 aaaaa 85
|||||
Sbjct: 168 aaaaa 164
>RF01058;MIR806;AAAA02007552.1/7379-7618 39946:Oryza sativa Indica
Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 196/225 (87%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| |||||||||| |||| |||| || ||||||| |||||| | ||||||||||||
Sbjct: 1 atacttcctccgtttctaaatatttgccgtcgttgactttttaaa-atatgtttgaccgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| | ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 60 ttatattatttaaaaaaattaagtaattattaattcttttt-tatcatttgattcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
||||||||||| ||| | |||||| ||||||||||||||| || ||||||||| |||
Sbjct: 119 taaatatatttatatgtatacatatagttttacatatttcaccaacttttttgaattaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 179 cgaacggtcaaatatatgctaaaaagtcaacggtgtcaaacattt 223
Score = 63.9 bits (32), Expect = 1e-09
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||| |||||||| ||||| ||| || ||||||||||||||| ||||||||||
Sbjct: 223 aaatgtttgacaccgttgacttttta-gcatatatttgaccgttcgtctaattcaaaaaa 165
>RF01058;MIR806;AAAA02015190.1/1619-1379 39946:Oryza sativa Indica
Group
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 158/177 (89%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 48 atgtttaaccgttcgtcttattcaaaaattttaagtaattattaattcttttcctatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||| ||||||||||||||| ||| ||| | |||||| |||||||||||||||||||||
Sbjct: 108 ttgagtcattgttaaatatacttttatgtatacatatagttttacatatttcacaaaagt 167
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| ||||||| ||| ||| ||||||||||| | |||||| ||||
Sbjct: 168 ttttgaataagacgaacggtcaaacgtgtataaaaaagtcaacagcgtcaaatattt 224
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| | | |||| |||||||| |||||| |||| | ||| ||||||||||
Sbjct: 241 atactccctccatctttaaatatttgacgctgttgacttttttat-acacgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||||||||||| || | ||||||| ||| | |||||| |||| |
Sbjct: 75 tttttgaataagacgaacggttaaacatatttaaaaaagtaaaccgcgtcaaatatttag 16
Query: 236 aaacggaggga 246
||||| |||||
Sbjct: 15 aaacgaaggga 5
>RF01058;MIR806;AC135644.2/3714-3474 39947:Oryza sativa Japonica
Group
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 195/225 (86%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||| |||| | || |||| |||||||| |||||| |||| | |||| ||| ||| |
Sbjct: 1 atactctctccatctctaaatatttgacgctgttgacttttttaa-acatatttaaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||| |
Sbjct: 60 tcgtcttattcaaaaaatttaaataatttttagttcttttcctatcgtttgattcattct 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 120 taaatatatttttatgtatacatatagttttacatatttcacaaaagtttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||| ||| ||| ||||| |||||||||||||| |||||| ||||
Sbjct: 180 cgaatggtcaaacatgtgttaaaaagtcaacggcgtcaaatattt 224
Score = 77.8 bits (39), Expect = 7e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct: 224 aaatatttgacgccgttgactttttaa-cacatgtttgaccattcgtcttattcaaaaa 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| ||| |||||||||||| ||||||||||| | |||||| ||||
Sbjct: 75 tttttgaataagacgaatggttaaatatgtttaaaaaagtcaacagcgtcaaatattt 18
>RF01058;MIR806;AC109832.2/18874-19116 39947:Oryza sativa Japonica
Group
Length = 243
Score = 200 bits (101), Expect = 7e-51
Identities = 158/177 (89%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 46 atgtttgactgtttgtcttattcaaaaaatttaagtaattattaattcttttcttatcat 105
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 106 ttgattcattgttaaatatatttttatgtacacatataattttacatatttcacaaaagt 165
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||| | ||||| ||||| | ||| || | ||||||||||| | |||||||||||
Sbjct: 166 ttttaagtaagacgaacgatcaaacatattttaaaaagtcaatagcgtcaaacattt 222
>RF01058;MIR806;AC133216.2/47954-48182 39947:Oryza sativa Japonica
Group
Length = 229
Score = 200 bits (101), Expect = 7e-51
Identities = 170/193 (88%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atgtttgactgttcgtttaattcaaaaaatttaagtaattattaattcttttcctatcat 95
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|| ||| ||||||||||| |||| ||| | ||||| ||||| |||||||| |||| |
Sbjct: 96 ttaatttattgttaaatacatttatatgtatatatatagttttatatatttcataaaatt 155
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
|||| ||||||| ||||||||||| |||||||||||||| |||||||| ||| |||| ||
Sbjct: 156 tttttaataagacgaacggttaaacatgtgctaaaaagttaacggtgttaaatatttaga 215
Query: 237 aacggagggagta 249
|||||||||||||
Sbjct: 216 aacggagggagta 228
Score = 79.8 bits (40), Expect = 2e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| ||| || ||||| || ||||| |||||||||| |||||
Sbjct: 229 atactccctccgtttctaaatatttaacaccgttaacttttta-gcacatgtttaaccgt 171
Query: 69 tcgtcttattcaaaaaattt 88
|||||||||| |||||||||
Sbjct: 170 tcgtcttattaaaaaaattt 151
>RF01058;MIR806;AAAA02007038.1/27853-28093 39946:Oryza sativa Indica
Group
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 173/195 (88%), Gaps = 4/195 (2%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 48 atgtttgaccgtttgtcttatttaaaaaatttaagtaattattaattcttttcctatcat 107
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||| ||||||| ||| ||| | |||||| |||||||||||||||||||||
Sbjct: 108 ttgattcattattaaatactttt--atgtatacatatagttttacatatttcacaaaagt 165
Query: 177 ttttga--ataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
|||| |||||| ||| ||| ||| ||||||||||||||||||||| ||||| ||||
Sbjct: 166 tttttcttataagacgaatggtcaaacatgtgctaaaaagtcaacggtatcaaatattta 225
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 226 gaaacggagggagta 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 241 atactccctccgtttctaaatatttgataccgttgacttttta-gcacatgtttgaccat 183
Query: 69 tcgtcttat 77
|||||||||
Sbjct: 182 tcgtcttat 174
>RF01058;MIR806;AC145395.3/109067-108831 39947:Oryza sativa Japonica
Group
Length = 237
Score = 200 bits (101), Expect = 7e-51
Identities = 210/242 (86%), Gaps = 7/242 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||| || ||||||| |||| |||||| | |||||||| ||
Sbjct: 1 atactccctccgtttataaatattcgacgccgctgactttttaaa-atatgtttgattgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaatt-aagtaattattaattcttttcctatcatttgattcattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| || ||| | ||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 119 taaatatacttatatgtataaatatagttttatatatttcacaaaactttttgaataaga 178
Query: 189 tgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
| || ||||||||||| |||||||||||||||||||| |||| ||||| |||||||
Sbjct: 179 ----cagtcaaatatgtgcttaaaaagtcaacggtgtcaaatatttagaaacagagggag 234
Query: 248 ta 249
||
Sbjct: 235 ta 236
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgac 65
||||||||| ||||| |||| |||||| |||||||| |||||||||||| ||||||
Sbjct: 236 tactccctctgtttctaaatatttgacaccgttgactttttaagcacatatttgac 181
>RF01058;MIR806;AP003517.3/100961-100723 39947:Oryza sativa Japonica
Group
Length = 239
Score = 200 bits (101), Expect = 7e-51
Identities = 207/240 (86%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||| |||| ||||||||||| |||||||| || || | | |||||||||||||
Sbjct: 2 tactccctcggttttaaaatgtttgacaccgttgactttcta-gtatatgtttgaccgtt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttgttgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||||||| | |||||||||| ||||||||||| || ||||| |||||||
Sbjct: 121 aaatatactttcatgtacacatataatttcacatatttcac--aatttttttaataagac 178
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| ||||||||| | |||||| || |||||||| ||| ||||||||||||| ||||||
Sbjct: 179 gaatggttaaatacgcactaaaacgttaacggtgttaaatatttcgaaacggatggagta 238
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||||||| ||| || | ||| |||||||||||||||||||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacatatactagaaagtcaacggtgtcaaacatttta 16
Query: 236 aaacggagggagta 249
|||| |||||||||
Sbjct: 15 aaaccgagggagta 2
>RF01058;MIR806;AAAA02002775.1/12161-12400 39946:Oryza sativa Indica
Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 208/241 (86%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| | |||||||| |||||||||| |||| | | |||||||| |||
Sbjct: 1 atactccctccgtccctaaatgtttaacgccgttgatttttttaa-atatgtttgatcgt 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||| ||||||||||||||| ||||||||| ||||||| ||||||
Sbjct: 60 tcgtcttattaaaaaaatt-aagtaattattaatttttttcctattatttgatccattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | |||||| |||||||||||||||| ||||||||||||||||
Sbjct: 119 taaatatatttttatgtatacatatagttttacatatttcacacaagtttttgaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
|||| || ||| || | ||||||||||||| ||||||||||| || |||||||||||
Sbjct: 179 cgaacagtcaaacatatttaaaaaagtcaacggcgtcaaacatttagagacggagggagt 238
Query: 249 a 249
|
Sbjct: 239 a 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| || |||||||||||||||||||| |||| | | ||||||||| ||
Sbjct: 240 atactccctccgtctctaaatgtttgacgccgttgactttttta-aatatgtttgactgt 182
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 181 tcgtcttattcaaaaa 166
>RF01058;MIR806;BX664712.3/32416-32656 4530:Oryza sativa (rice)
Length = 241
Score = 200 bits (101), Expect = 7e-51
Identities = 207/241 (85%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||||| | |||||| |||||||| ||||| ||| |||||||||||
Sbjct: 1 atactccctccgtttcgttttatttgacaccgttgacttttta-gcatatgtttgaccgc 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| || ||||| ||||||||||| || ||||||||| ||||| ||||||||||||||||||
Sbjct: 60 ttgttttatttaaaaaatttaaatatttattaatttttttcatatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | ||||| ||||||||||||||||||| |||||||||||||
Sbjct: 120 taaatatacttttatgtatatatatagttttacatatttcacaaaattttttgaataaga 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| |||||||||||||||||| | |||||| | |||||| ||||||||
Sbjct: 180 cgaacggtcaaacatgtgctaaaaagtcaacagcgtcaaataaaacgaaacagagggagt 239
Query: 249 a 249
|
Sbjct: 240 a 240
Score = 87.7 bits (44), Expect = 7e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||| |||||| | |||||||| |||||| ||||| ||||||||||||||||
Sbjct: 241 atactccctctgtttcgttttatttgacgctgttgacttttta-gcacatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaaattt 88
||||||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaaattt 163
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 205 tgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 46 tgctaaaaagtcaacggtgtcaaataaaacgaaacggagggagta 2
>RF01058;MIR806;AC078977.6/20616-20377 39947:Oryza sativa Japonica
Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 208/241 (86%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||| ||||||||| | |||| ||||||||||||||| |||| | |||||| ||||| |
Sbjct: 1 atacgccctccgttcctaaatatttgacgccgttgacttttttaa-acatgtctgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|| ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 60 tcttcttatttaaaagatttaagtaattattaattctcatcctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | |||||| |||||||||||||| ||||||||||||||||||
Sbjct: 120 taaatatacttt-atgtatacatatagttttacatatttcataaaagtttttgaataaga 178
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| ||| |||| |||||| ||||||| |||||| |||| | |||||||||||
Sbjct: 179 cgaacggtcaaacatgttttaaaaaatcaacggcgtcaaatatttagggacggagggagt 238
Query: 249 a 249
|
Sbjct: 239 a 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| | |||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 240 atactccctccgtccctaaatatttgacgccgttgattttttaaa-acatgtttgaccgt 182
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 181 tcgtcttattcaaaaa 166
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 200 bits (101), Expect = 7e-51
Identities = 209/241 (86%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| |||||||| ||||| || |||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttatt-acgtgtttgactat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||||| ||||||||||| ||||||||| || |||| ||| |||||
Sbjct: 60 tcgtcttattaaaaaaatt-aagtaattatttattcttttcatacaatttaatttattgt 118
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||||||| | |||||||||||||||||||||| ||| |||||||||||||
Sbjct: 119 taaatatactttcatgtacacatataattttacatatttcac-aaattttttgaataaga 177
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||||||| |||||||| ||||||||| |||||||| ||| |||| ||||||| |||||
Sbjct: 178 cgaacggtcaaatatgtactaaaaagttaacggtgttaaatattttaaaacggatggagt 237
Query: 249 a 249
|
Sbjct: 238 a 238
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 43 taaaaagtcaacggtgtcaaacattttgaaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| ||||||| |||| ||| || ||||| || ||||| | |||| |||||||||
Sbjct: 239 atactccatccgttttaaaatatttaacaccgttaacttttta-gtacatatttgaccgt 181
Query: 69 tcgtcttattcaaaaaattt 88
||||||||||||||||||||
Sbjct: 180 tcgtcttattcaaaaaattt 161
>RF01062;MIR812;AP002910.1/122939-122767 39947:Oryza sativa Japonica
Group
Length = 173
Score = 198 bits (100), Expect = 3e-50
Identities = 130/140 (92%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 103
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||| ||| || | |||||| |||||||||||| |||| |
Sbjct: 102 atttgattcattgttaaatataattttatatatacatatagttttacatattttacaaga 43
Query: 175 gtttttgaataagatgaacg 194
|||||||||||||| |||||
Sbjct: 42 gtttttgaataagacgaacg 23
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaa 84
|||||||| |||||||||||||||||||
Sbjct: 14 atgtttgatcgttcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02008882.1/388-148 39946:Oryza sativa Indica
Group
Length = 241
Score = 198 bits (100), Expect = 3e-50
Identities = 161/180 (89%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
||||||||||||||||| || |||||| | || |||||| || ||||||||| ||||||
Sbjct: 18 aaatgtttgacgccgttaactttttaaaaa-atatttgactgtacgtcttatttaaaaaa 76
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 77 tttaagtaattattaattcttttcctatcatttgatttattgttaaatatatttttatgt 136
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| ||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||
Sbjct: 137 atatatatagttttacatatttcataaaagtttttgaataagatgagcggttaaacatgt 196
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa Indica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 11 actccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttc 70
|||||||||||| | |||| ||| |||||||||| |||| | |||||||| || ||||
Sbjct: 3 actccctccgttcctaaatatttaacgccgttgaattttttaa-acatgtttaactgttc 61
Query: 71 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtta 130
|| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 62 gttttattcaaacaatttaagtaattattaattcttttcttatcatttgatttattgtta 121
Query: 131 aatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatg 190
|||||| ||| || | |||||| |||||||||||| |||||||||||| ||||| |||
Sbjct: 122 aatatacttttatatatacatatagttttacatattttacaaaagttttt-aataaaatg 180
Query: 191 aacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
|||||| |||||||| |||||||||| |||||||||| |||| | ||| ||||||||||
Sbjct: 181 aacggtcaaatatgttttaaaaagtcatcggtgtcaaatatttaggaacagagggagtac 240
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 198 bits (100), Expect = 3e-50
Identities = 197/227 (86%), Gaps = 3/227 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| |||||||| ||||| | || ||||||||| |
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttta-gtacgtgtttgaccat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
||||||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||
Sbjct: 60 tcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttatagt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttca--caaaagtttttgaataa 186
||||||| |||||| | |||||| |||||||||||||| |||| |||||||||
Sbjct: 120 aaaatatactttcatatacacatatagttttacatatttcaacaaaaaaaatttgaataa 179
Query: 187 gatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||| ||| || ||||||||||||| |||||||||||||
Sbjct: 180 gatgaacggtaaaacatacactaaaaagtcaacagtgtcaaacattt 226
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| ||| ||| ||| | || ||||||||||||||||||||||||||| |
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttg 16
Query: 236 aaacggagggagta 249
||||||||||||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AC108224.6/11522-11754 39947:Oryza sativa Japonica
Group
Length = 233
Score = 198 bits (100), Expect = 3e-50
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgtttgaccgttcgtcttatttaaaaaatttaagtaattattaattcttttcctatcat 98
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||| ||||||||||||||||| ||| | |||||| ||||||| |||||| ||||||
Sbjct: 99 ttgatttattgttaaatatatttttatgtatacatatagttttacacatttcataaaagt 158
Query: 177 ttttgaataagatgaacggt 196
|||||||||||| |||||||
Sbjct: 159 ttttgaataagacgaacggt 178
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||
Sbjct: 216 aaatgtttgacgccgttgattttttttaaatatgtttgaccgttcgtcttattcaaaaa 158
>RF01058;MIR806;AACV01015343.1/28803-28568 39947:Oryza sativa
Japonica Group
Length = 236
Score = 198 bits (100), Expect = 3e-50
Identities = 159/177 (89%), Gaps = 5/177 (2%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 48 atgtttaactgttcgtcttata-aaaaaatttaagtaattattaattattttcctatcat 106
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||
Sbjct: 107 ttgattcattgttaaatatacttttatgca----tatagttttacatatttcacaaaagt 162
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||||| ||||||||||| |||| ||||||||||||| |||||||||||
Sbjct: 163 ttttgaataagacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaacattt 219
Score = 69.9 bits (35), Expect = 2e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||
Sbjct: 219 aaatgtttgacgccgttgacttttttaa-acatgtttaaccgttcgtcttattcaaaaa 162
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 198 bits (100), Expect = 3e-50
Identities = 210/244 (86%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| ||| ||||||||||| ||||| || ||| || || ||| ||||| |
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaacttttaaaatacgtgtgtgaccat 60
Query: 69 tcgtcttattcaaaaaattta-agtaattattaattcttttcctatcatttgattcattg 127
|||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 61 tcgtcttattaaaaaaattttgagtaattatttattcttttcatatcatttgattcattg 120
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||||||||||||| |||||| ||||| |||||||||| | ||||| |||||
Sbjct: 121 ttaaatatattttcatgcatacatatagttttatatatttcacagattttttttaataat 180
Query: 188 atgaacggttaaatatgtgctaaaaagtcaacggtgtcaaaca-tttcgaaacggaggga 246
| ||||||| ||| ||||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 181 acgaacggtcaaacatgtgttaaaaagtcaacggtgttaaacatttttgaaacggagggt 240
Query: 247 gtac 250
||||
Sbjct: 241 gtac 244
Score = 65.9 bits (33), Expect = 3e-10
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaaa-tgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
||||||||||| ||| ||||| || |||||||| |||||| |||||||||||||||||||
Sbjct: 239 ccctccgtttcaaaaatgtttaacaccgttgactttttaa-cacatgtttgaccgttcgt 181
Query: 73 cttattcaaaaaa 85
||||| ||||||
Sbjct: 180 attattaaaaaaa 168
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 210 aaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 41 aaaagttaacggtgtcaaacattttaaaatggagggagta 2
>RF01058;MIR806;AAAA02000149.1/12442-12684 39946:Oryza sativa Indica
Group
Length = 243
Score = 198 bits (100), Expect = 3e-50
Identities = 161/180 (89%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 64 cgtcttatt-aaaaaatttaagtaattattaattcttttcctattatttgattcattgtt 122
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| || ||| | |||| | ||||||||||||||||||| |||||||||||||
Sbjct: 123 aaatatacttatatgtatacatacagttttacatatttcacaaaaatttttgaataagac 182
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| ||| |||||||||||| |||||||||||||| |||| |||| ||||| ||||
Sbjct: 183 gaacggtcaaacatgtgctaaaaaatcaacggtgtcaaatatttagaaagggaggaagta 242
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||| ||||| |||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 243 atacttcctccctttctaaatatttgacaccgttgatttttta-gcacatgtttgaccgt 185
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 184 tcgtcttattcaaaaa 169
>RF01058;MIR806;AACV01004856.1/662-425 39947:Oryza sativa Japonica
Group
Length = 238
Score = 198 bits (100), Expect = 3e-50
Identities = 207/239 (86%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||| |||||||| |||| ||||||||||||||| |||||| |||||||||||| |
Sbjct: 1 atactccatccgtttctaaatatttgacgccgttgactttttaa--acatgtttgaccat 58
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|||||||||| |||||| |||||||||||||| || |||||||||||||||||| |||||
Sbjct: 59 tcgtcttatt-aaaaaagttaagtaattattattt-ttttcctatcatttgatttattgt 116
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||| ||| | |||||| |||||||||||||| |||| |||||||||||||
Sbjct: 117 taaatatatttttatgtatacatatagttttacatatttcataaaattttttgaataaga 176
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggag 247
||||||| ||| ||||| |||| || |||| |||||| |||| | |||| ||||||
Sbjct: 177 cgaacggtcaaacatgtgtaaaaaggttaacgtcgtcaaatatttaggaacgaagggag 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
|||||| |||| | |||| ||||||| |||| || |||| | ||||||||||||||||||
Sbjct: 235 ctcccttcgttcctaaatatttgacgacgttaaccttttta-cacatgtttgaccgttcg 177
Query: 72 tcttattcaaaaaattt 88
|||||||||||||||||
Sbjct: 176 tcttattcaaaaaattt 160
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||||||||||| |||||| |||| |||||||| ||||||
Sbjct: 43 taaaaagtcaacggcgtcaaatatttagaaacggatggagta 2
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 198 bits (100), Expect = 3e-50
Identities = 208/238 (87%), Gaps = 7/238 (2%)
Strand = Plus / Plus
Query: 14 ccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtc 73
||||||||||| |||| |||||||| |||||| |||| | |||||||||| | ||||||
Sbjct: 6 ccctccgtttctaaatatttgacgctgttgacttttttaa-acatgtttgatcattcgtc 64
Query: 74 ttattcaaaaaatttaagtaattatta-attcttttcctatcatttgattcattgttaaa 132
||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 65 ttattaaaaaa--ttaagtaattattatatttttttcctatcatttgattcattgttaaa 122
Query: 133 tatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaa 192
|||||||||||| | |||||| |||||||||| | ||||| ||||| ||||||| |||
Sbjct: 123 tatattttcatgtatacatatagttttacatatat--caaaaatttttaaataagacgaa 180
Query: 193 cggttaaatatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| ||| |||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 181 aggtcaaacatgtgcttaaaaagtcaacggtgtcaaatatttagaaacggagggagta 238
Score = 103 bits (52), Expect = 1e-21
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| |||| |||||| |||||||| |||||||||||||||||||| |
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttaagcacatgtttgacctt 180
Query: 69 tcgtcttattcaaaaa 84
|||||||||| |||||
Sbjct: 179 tcgtcttatttaaaaa 164
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
||||||||||| | |||||| |||| ||||||||||| ||||
Sbjct: 42 aaaaagtcaacagcgtcaaatatttagaaacggagggggtac 1
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 198 bits (100), Expect = 3e-50
Identities = 198/229 (86%), Gaps = 5/229 (2%)
Strand = Plus / Plus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| ||||||||||| ||||||| ||||||| |||| ||||||| |||||||||||||
Sbjct: 19 tttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtcttattca 78
Query: 81 aaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttt 140
||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||
Sbjct: 79 aaaaatttaagtaattatttattctttttatatcatttgatttattgttaaatatacttt 138
Query: 141 catgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaa 200
||| | |||||| ||||||||||||||| ||| ||||| ||||||| ||||| |
Sbjct: 139 gatgtatacatatagttttacatatttcac-aaatttttttaataagacgaacg----at 193
Query: 201 tatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||| |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 194 catgtgttaaaaagtcaacggtgtcaaacattttgaaatagagggagta 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgct-aaaaagtcaacggtgtcaaacatttc 234
||||||||||||| ||| ||| |||||||| || ||||| |||||||||||||||||||
Sbjct: 82 tttttgaataagacgaatggtcaaatatgtacttaaaaaatcaacggtgtcaaacatttt 23
Query: 235 gaaa 238
||||
Sbjct: 22 gaaa 19
Score = 54.0 bits (27), Expect = 1e-06
Identities = 68/80 (85%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||| |||| ||||||||||| |||||||| |||||| |||| ||| |||
Sbjct: 243 atactccctctatttcaaaatgtttgacaccgttgactttttaa-caca----tgatcgt 189
Query: 69 tcgtcttattcaaaaaattt 88
|||||||||| |||||||||
Sbjct: 188 tcgtcttattaaaaaaattt 169
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 198 bits (100), Expect = 3e-50
Identities = 158/176 (89%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 49 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattttttta-tatcatt 107
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||| ||||||||||| | ||||||| | ||||||||||||||||||||||||| ||
Sbjct: 108 tgatttattgttaaataaactttcatgtacacatataattttacatatttcacaaatttt 167
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||
Sbjct: 168 attgaataagacgaacggttaaacatgtgctaaaaagttaacggtgtcaaatattt 223
Score = 56.0 bits (28), Expect = 3e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaa 81
|||| |||||| ||||| || ||||| |||||||||| ||||||||||||||||||
Sbjct: 223 aaatatttgacaccgttaacttttta-gcacatgtttaaccgttcgtcttattcaa 169
>RF01058;MIR806;AACV01020600.1/2243-2008 39947:Oryza sativa Japonica
Group
Length = 236
Score = 198 bits (100), Expect = 3e-50
Identities = 182/208 (87%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||
Sbjct: 18 aaatgtttgacgccgttgacttttttaa-acatgtttgaccgtttgtcttattcaaaaaa 76
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 77 tttaagcaattattaatttatttcctaccatttgattcattgttaaatatacttttatgt 136
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||| ||||||| ||||||||||||||||||| ||| ||| ||| ||||
Sbjct: 137 atacatatagttttatatatttcgcaaaagtttttgaataagacgaatggtcaaacatgt 196
Query: 206 gctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||||| ||||
Sbjct: 197 ttaaaaaagtcaacggcgtcaaatattt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||||| |||| | |||||||||||| |||||||||||||||||
Sbjct: 224 aaatatttgacgccgttgacttttttaa-acatgtttgaccattcgtcttattcaaaaa 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||||||||||| |||||| ||| |||| ||||||||||||| |||||||||||
Sbjct: 75 tttttgaataagacaaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 18
>RF01058;MIR806;AC079890.13/57411-57648 4530:Oryza sativa (rice)
Length = 238
Score = 198 bits (100), Expect = 3e-50
Identities = 184/208 (88%), Gaps = 3/208 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||||||||||| |||| | | |||||||||||||||||||||| ||||||
Sbjct: 18 aaatatttgacgccgttgacctttttaaaa-atgtttgaccgttcgtcttattaaaaaaa 76
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||
Sbjct: 77 tt-aagtaattattaattcttttcccttcatttgatttattgttaaatatatttttatgt 135
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||
Sbjct: 136 atacatatagttttacatatttcac-aaagtttttgaataaaatgaatggtcaaatatgt 194
Query: 206 gctaaaaagtcaacggtgtcaaacattt 233
||||| |||||||||||||||||||
Sbjct: 195 ttaaaaaaatcaacggtgtcaaacattt 222
>RF01058;MIR806;AAAA02014556.1/8386-8630 39946:Oryza sativa Indica
Group
Length = 245
Score = 198 bits (100), Expect = 3e-50
Identities = 158/176 (89%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||| | ||||||||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct: 47 atgtttgatcattcgtcttatt-aaaaaagttaagtaattattaattcttttcctctcat 105
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||| | |||||||| ||| ||| | |||||||||||||||||| |||||||||
Sbjct: 106 ttgattcatcgctaaatatacttttatgtatacatataattttacatattccacaaaagt 165
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatt 232
||||||||||| | || ||||||| |||||||||||||||||||| ||||||||||
Sbjct: 166 ttttgaataaggtaaatggttaaacatgtgctaaaaagtcaacggcgtcaaacatt 221
Score = 52.0 bits (26), Expect = 4e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 27 aatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||||||||| |||| ||||||||||| ||| || ||||||||||||
Sbjct: 221 aatgtttgacgccgttgac-tttttagcacatgtttaaccatttaccttattcaaaaa 165
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||||||||||||| || ||||| | | |||||||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacgccgttaacttttta-gtatgtgtttgactatt 60
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattatttaatctttttatatcatttgattcattgtt 120
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
|||||||||||||| | |||||| |||||||||||| | ||| ||||| |||||||
Sbjct: 121 taatatattttcatgtacacatatagttttacatatttta-taaatttttttaataagac 179
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|||||| ||| |||||||||| ||||||||| || |||||||| ||||||||||||||
Sbjct: 180 gaacggccaaacatgtgctaaagagtcaacggcgttaaacattttaaaacggagggagta 239
Score = 89.7 bits (45), Expect = 2e-17
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 240 atactccctccgttttaaaatgtttaacgccgttgactcttta-gcacatgtttggccgt 182
Query: 69 tcgtcttattcaaaaaattta 89
|||||||||| ||||||||||
Sbjct: 181 tcgtcttattaaaaaaattta 161
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 207 ctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 44 ctaaaaagttaacggcgtcaaacattttgaaacggagggagta 2
>RF01062;MIR812;AAAA02005959.1/23917-23745 39946:Oryza sativa Indica
Group
Length = 173
Score = 196 bits (99), Expect = 1e-49
Identities = 138/151 (91%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 162 acatgtttgactgttcgtcttatttaaaaaatttaagtaattattaattctttttctatc 103
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||| ||| | | | ||||| |||||||||||||||||||
Sbjct: 102 atttgattcattgttaaatatacttttaggtaaagatatagttttacatatttcacaaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgt 205
|||||||||||||||||||||| ||| ||||
Sbjct: 42 gtttttgaataagatgaacggtcaaacatgt 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||||||||||| |||||||||||||
Sbjct: 12 acatgtttgaccgttcatcttattcaaaaa 41
>RF01062;MIR812;AL731751.4/50667-50496 4530:Oryza sativa (rice)
Length = 172
Score = 196 bits (99), Expect = 1e-49
Identities = 156/171 (91%), Gaps = 3/171 (1%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaa-aaaatttaagtaattattaattct 105
|||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 169 tttttagcacatgtttgaccgttcgtcttattcaaaaaaatttaactaattattaattc- 111
Query: 106 tttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatat 165
|||| |||||||||||||||||||||||||||||| || | | ||||||||||||||||
Sbjct: 110 tttcatatcatttgattcattgttaaatatatttttatatacgtatataattttacatat 51
Query: 166 ttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||||| ||||| | ||||||| ||| |||||||||||||||
Sbjct: 50 ttcacaaaagttttt-aataaaacgaacggtcaaacatgtgctaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 132 tttttgaataagacgaacggtcaaacatgtgctaaaaagtc 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaa 83
|||| ||||||||||||||||||||| ||||| ||||
Sbjct: 4 tttttagcacatgtttgaccgttcgttttattaaaaa 40
>RF01058;MIR806;AAAA02026300.1/2718-2486 39946:Oryza sativa Indica
Group
Length = 233
Score = 196 bits (99), Expect = 1e-49
Identities = 170/191 (89%), Gaps = 2/191 (1%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||| | ||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 40 atgtttgatcattcgtcttattaaaaaaatt-aagtaattattaattcttttcctatcat 98
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||
Sbjct: 99 ttgattcattgttaaatatatttatatgtatacatataattttacatatttcataaaagt 158
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaa-gtcaacggtgtcaaacatttcg 235
||||||||| || ||||| | ||| |||| ||||||| | |||||||||||| |||| |
Sbjct: 159 ttttgaataggacgaacgatcaaacatgtactaaaaatttgaacggtgtcaaatatttag 218
Query: 236 aaacggaggga 246
|||||||||||
Sbjct: 219 aaacggaggga 229
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 13 tccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgt 72
|||||||||||| |||| |||||| ||||| | ||||| || |||||||||| |||||||
Sbjct: 229 tccctccgtttctaaatatttgacaccgttcaaatttttagtacatgtttgatcgttcgt 170
Query: 73 cttattcaaaaa 84
| ||||||||||
Sbjct: 169 cctattcaaaaa 158
>RF01058;MIR806;AAAA02000975.1/36980-36740 39946:Oryza sativa Indica
Group
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 159/179 (88%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 46 acatgtttgaccattcgtcttattcaaaaaatttaagtaattattaattattttcctatc 105
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||
Sbjct: 106 atttgattcattgttaaatatattttaatgtatatatatagttttacatatttcacaaaa 165
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
||||| |||| ||| |||| | ||| |||| ||||||| ||||| |||||||||||
Sbjct: 166 gttttagaatgagacgaacaatcaaacatgttttaaaaagataacggcgtcaaacattt 224
>RF01058;MIR806;AC136481.6/23965-23723 39947:Oryza sativa Japonica
Group
Length = 243
Score = 196 bits (99), Expect = 1e-49
Identities = 167/187 (89%), Gaps = 2/187 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcg-aaatgtttgacgccgttgacattttaagcacatgtttgaccg 67
||||||||||||| || |||||||||||||||||||| |||| | |||||||||||||
Sbjct: 1 atactccctccgtctcctaaatgtttgacgccgttgacttttttaa-acatgtttgaccg 59
Query: 68 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 127
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 60 ttcgtcttattcaaaaaatttaagaaattattaattcttttcctatcatttaattcattg 119
Query: 128 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 187
||||||||| ||| ||| | ||||| |||||| ||||| |||| ||||||||||||||
Sbjct: 120 ttaaatataattttatgtatatatatagttttacgtattttacaagagtttttgaataag 179
Query: 188 atgaacg 194
| |||||
Sbjct: 180 acgaacg 186
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt-c 234
||||||||||||| ||||||| ||| |||| ||||||||||||| |||||||||||
Sbjct: 76 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacatttag 17
Query: 235 gaaacggagggagta 249
|| ||||||||||||
Sbjct: 16 gagacggagggagta 2
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 165/187 (88%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
||||||| |||||||||||| ||| ||||||| |||||| | ||||||||||| |||| |
Sbjct: 38 ttttaagtacatgtttgaccattcatcttattaaaaaaaatcaagtaattatttattcct 97
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||| |||||||||||||||| |||||||||||||||| | || ||| |||||||||||
Sbjct: 98 ttcatatcatttgattcattattaaatatattttcatatacacacatagttttacatatt 157
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtca 226
||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 158 tcacaaatatttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 217
Query: 227 aacattt 233
|| ||||
Sbjct: 218 aatattt 224
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||| ||| |||| |||||| |||||||| ||||| ||||||||||||||||
Sbjct: 241 atactccctctattttaaaatatttgacaccgttgacttttta-gcacatgtttgaccgt 183
Query: 69 tcgtcttattcaaaaa 84
||||||||||||||||
Sbjct: 182 tcgtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||||||| ||| ||| |||| || |||| | || ||||||||||||| |
Sbjct: 75 ttttttaataagatgaatggtcaaacatgtacttaaaaattaatagtgtcaaacattttg 16
Query: 236 aaacgga 242
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 196 bits (99), Expect = 1e-49
Identities = 197/227 (86%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 18 ccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttat 77
||||||| |||| |||||| ||||||| |||||| || ||||||||| ||||||||||
Sbjct: 8 ccgtttcaaaatatttgacatcgttgactttttaat-acgtgtttgaccattcgtcttat 66
Query: 78 tcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatat 137
| |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 67 taaaaaaatt-aagtaattatttattcttttcatatcatttgattcattgttaaatatac 125
Query: 138 tttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggtt 197
||||||| | |||||| ||||||| |||||||||| ||||||||||| | |||||||
Sbjct: 126 tttcatgtacacatatagttttacacatttcacaaacttttttgaataatacgaacggtc 185
Query: 198 aaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagg 244
|||||| | |||||||||||| |||| |||||||| ||||||||||
Sbjct: 186 aaatatttactaaaaagtcaatagtgtgaaacattttgaaacggagg 232
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtct 74
|||||||||| |||||||| || | ||||| ||||| | | || ||||||||||||| |
Sbjct: 232 cctccgtttcaaaatgtttcacactattgacttttta-gtaaatatttgaccgttcgtat 174
Query: 75 tattcaaaaaa 85
|||||||||||
Sbjct: 173 tattcaaaaaa 163
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacgg 241
||||||||||||| ||||||| |||| |||||||
Sbjct: 41 taaaaagtcaacgatgtcaaatattttgaaacgg 8
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 196 bits (99), Expect = 1e-49
Identities = 200/230 (86%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 21 tttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattca 80
|||| |||| |||||| |||||||| ||||| | | |||||| ||| || ||||||||||
Sbjct: 13 tttcaaaatatttgacaccgttgacttttta-gtatatgtttaaccatttgtcttattca 71
Query: 81 aaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttt 140
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct: 72 aaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatacttt 131
Query: 141 catgcaggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaa 200
|||| | |||||| ||||| ||||||| | || ||||| ||||||| ||||| |||||
Sbjct: 132 catgtatacatatagttttatatatttcgc--aatttttttaataagacgaacgattaaa 189
Query: 201 tatgtgc-taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
|| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 190 cataggcttaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| |||||||| |||||||| |||||| | |||
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttgactttttaagcctatgtttaatcgt 181
Query: 69 tcgtcttattcaaaaaatt 87
|||||||||| ||||||||
Sbjct: 180 tcgtcttattaaaaaaatt 162
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||||||||||| || ||||||| || | |||||||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacaaatggttaaacatatactaaaaagtcaacggtgtcaaatattttg 16
Query: 236 aaa 238
|||
Sbjct: 15 aaa 13
>RF01058;MIR806;AACV01024998.1/37983-37736 39947:Oryza sativa
Japonica Group
Length = 248
Score = 196 bits (99), Expect = 1e-49
Identities = 190/219 (86%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 31 tttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaa 90
|||||||| |||||| |||||| | |||||| |||||| ||||||| |||||||| ||
Sbjct: 30 tttgacgctgttgactttttaaa-atatgtttaaccgtttatcttatttaaaaaattgaa 88
Query: 91 gtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggca 150
||||||||||| | |||||||||||||||||||||||||||||||| || |||| | ||
Sbjct: 89 gtaattattaaattttttcctatcatttgattcattgttaaatatacttacatgtataca 148
Query: 151 tataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaa 210
|||| ||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||
Sbjct: 149 tatagttttacatatttcacaaaagtttttgaataagacgaacgatcaaacatgtgctaa 208
Query: 211 aaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||| ||||| ||| ||| |||| |||| ||||||||||
Sbjct: 209 aaaaccaacgatgttaaatatttagaaatggagggagta 247
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| ||||||||||||| |||||||||||||||||||
Sbjct: 211 tttttagcacatgtttgatcgttcgtcttattcaaaaa 174
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 196 bits (99), Expect = 1e-49
Identities = 171/195 (87%)
Strand = Plus / Plus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 42 acatatttgaccattcgttttattcaaaaaagttaagtaattattaattcttttcatatc 101
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||||||||||| ||||||||| ||||||| | ||||| |||||| ||||||||||||
Sbjct: 102 atttgattcattattaaatatactttcatgtatatatatagttttacttatttcacaaaa 161
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttc 234
||| ||||| | ||||||| ||| || ||||||||||| |||||||||||||||||
Sbjct: 162 aaattttaataatacgaacggtcaaacatatgctaaaaagttaacggtgtcaaacattta 221
Query: 235 gaaacggagggagta 249
|||||||||||||||
Sbjct: 222 gaaacggagggagta 236
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
|||||||||||||||| ||||||||||| ||||| || |||| |||| ||||||||||||
Sbjct: 237 atactccctccgtttctaaatgtttgacaccgttaac-tttttagcatatgtttgaccgt 179
Query: 69 tcgtcttatt 78
|||| |||||
Sbjct: 178 tcgtattatt 169
>RF01058;MIR806;AP008218.1/24184224-24184439 39947:Oryza sativa
Japonica Group
Length = 216
Score = 196 bits (99), Expect = 1e-49
Identities = 120/127 (94%)
Strand = Plus / Plus
Query: 124 attgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaa 183
||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 90 attgttaaatatatttttatgtaggcatataattttatatatttcacaaaattttttgaa 149
Query: 184 taagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggag 243
||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 150 taagacgaacggttaaatatgtactaaaaagtcaacggtgtcaaatatttcgaaacggag 209
Query: 244 ggagtac 250
|||||||
Sbjct: 210 ggagtac 216
Score = 93.7 bits (47), Expect = 1e-18
Identities = 84/96 (87%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaag----cacatgtttgac 65
||||||||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 2 tactccctccgtttcgaaatgttcgacgccgttgacttttttttttttcacatgtttgac 61
Query: 66 cgttcgtcttattcaaaaaatttaagtaattattaa 101
|||| |||||||| ||||||||||||||||| ||||
Sbjct: 62 cgtttgtcttatttaaaaaatttaagtaattgttaa 97
Score = 93.7 bits (47), Expect = 1e-18
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
|||||||||||||||||||| |||||| |||||||| |||| || |||| ||| ||||||
Sbjct: 215 tactccctccgtttcgaaatatttgacaccgttgac-tttttagtacatatttaaccgtt 157
Query: 70 cgtcttattcaaaaaattt 88
|||||||||||||||||||
Sbjct: 156 cgtcttattcaaaaaattt 138
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 42 aaaaagtcaacggcgtcgaacatttcgaaacggagggagta 2
>RF01062;MIR812;AP004015.3/68789-68961 39947:Oryza sativa Japonica
Group
Length = 173
Score = 194 bits (98), Expect = 4e-49
Identities = 146/162 (90%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 114
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 162 acatgtttgaccgttcgtcttattcaaaaattttaagtaattgttaatactttttctatc 103
Query: 115 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 174
|||| ||||||| ||||||||| ||| || | ||||||||||||||||||||||||||
Sbjct: 102 atttaattcattattaaatatacttttatatatacatataattttacatatttcacaaaa 43
Query: 175 gtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
|||||||||||||||||| ||| ||| || ||||||||||||
Sbjct: 42 gtttttgaataagatgaatggtcaaacatatgctaaaaagtc 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaa 84
|||| |||| |||||||||| ||| |||||||||||||
Sbjct: 4 tttttagcatatgtttgaccattcatcttattcaaaaa 41
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 194 bits (98), Expect = 4e-49
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctt 106
||||||| || ||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 170 ttttaagtacgtgtttgaccattcgtcttattcaaaaattttaagtaattatttattctt 111
Query: 107 ttcctatcatttgattcattgttaaatatattttcatgcaggcatataattttacatatt 166
||| |||||||||||||||| ||||||||| ||||| | | |||||| |||||||||||
Sbjct: 110 ttcatatcatttgattcattattaaatatactttcacgtacacatatagttttacatatt 51
Query: 167 tcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 216
||| |||| ||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 50 tcataaaattttttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 47 ttttaagcacatgtttgaccgttcgtcttattcaaaaaattt 88
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4 tttttagcacatgtttgaccgttcgtcttattcaaaaaattt 45
>RF01058;MIR806;AAAA02025483.1/16474-16234 39946:Oryza sativa Indica
Group
Length = 241
Score = 194 bits (98), Expect = 4e-49
Identities = 155/174 (89%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 51 tttgaccgttcgtcttattcaataaatttaagtaattaataattcttttcctatcatttg 110
Query: 120 attcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttt 179
||||||||||||||||| ||| ||| | |||||||||||||||||| |||||||||||
Sbjct: 111 attcattgttaaatatacttttatgtatatatataattttacatattttacaaaagtttt 170
Query: 180 tgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacattt 233
|||||| ||||||| | ||| |||| |||||| ||||||| |||||| ||||
Sbjct: 171 tgaataggatgaacaatcaaacatgttttaaaaaatcaacggcgtcaaatattt 224
>RF01058;MIR806;AAAA02008644.1/17444-17672 39946:Oryza sativa Indica
Group
Length = 229
Score = 194 bits (98), Expect = 4e-49
Identities = 143/158 (90%)
Strand = Plus / Plus
Query: 92 taattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcat 151
|||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 71 taattattaattattttcctatcatttgattcattgttaaatatatttttgtgtaggcat 130
Query: 152 ataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaa 211
|||||||||||||||||| ||||||||| ||||| | ||| ||||||| ||| |||||
Sbjct: 131 ataattttacatatttcataaaagttttcaaataacacgaatggttaaacatggactaaa 190
Query: 212 aagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||| ||||||||| ||||||||||||||||||||
Sbjct: 191 aagtcaatggtgtcaaatatttcgaaacggagggagta 228
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacatttta 51
||||||||||||||||||||| |||||| || ||||| |||||
Sbjct: 229 atactccctccgtttcgaaatatttgacaccattgacttttta 187
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 209 aaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||| | | |||| ||||||||||||||||||||
Sbjct: 42 aaaaagtcaacagcgccaaatatttcgaaacggagggagta 2
>RF01058;MIR806;AACV01000771.1/21345-21106 39947:Oryza sativa
Japonica Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 205/238 (86%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcg 71
|||||||||| || |||||||||||| ||||||| |||| | |||||||||||| ||||
Sbjct: 4 ctccctccgtctctaaatgtttgacgtcgttgacttttttaa-acatgtttgaccattcg 62
Query: 72 tcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaa 131
||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 63 tcttatt-aaaaaatttaagtaattattattatttttcctatcatttgattcattgttaa 121
Query: 132 atatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagatga 191
||||| || ||| | |||||| ||||||||||||||||||||||| ||||||| | |
Sbjct: 122 atatacttctatgtatacatatagttttacatatttcacaaaagtttctgaataaaacaa 181
Query: 192 acggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||| |||| ||| ||||||||| |||||| |||| | ||||||||||||
Sbjct: 182 acggttaaacatgtttaaaagagtcaacggcgtcaaatatttagggacggagggagta 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcg 235
||||| ||||||| ||| ||| ||| |||| |||||||||||| ||||||||||| |
Sbjct: 75 ttttttaataagacgaatggtcaaacatgtttaaaaaagtcaacgacgtcaaacatttag 16
Query: 236 aaacggagggag 247
| ||||||||||
Sbjct: 15 agacggagggag 4
Score = 44.1 bits (22), Expect = 0.001
Identities = 62/73 (84%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgac-attttaagcacatgtttgaccg 67
||||||||||||| | |||| ||||||||||||||| |||||| |||||||| ||||
Sbjct: 240 atactccctccgtccctaaatatttgacgccgttgactcttttaa--acatgtttaaccg 183
Query: 68 ttcgtcttattca 80
|| || |||||||
Sbjct: 182 tttgttttattca 170
>RF01058;MIR806;AP006856.2/4345-4109 39947:Oryza sativa Japonica
Group
Length = 237
Score = 194 bits (98), Expect = 4e-49
Identities = 173/194 (89%), Gaps = 3/194 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| ||||||||||||||| |||||| |||| |||||||||||||||||| |||||
Sbjct: 18 aaatatttgacgccgttgactttttaaa-acat-tttgaccgttcgtcttat-caaaatt 74
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 75 tttaagtaattattaattcttttcctatcatttgatttattactaaatatatttttatgt 134
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 135 atacatataattttacatatttctcaaaagtttttgaataagacgaacggttaaacatgt 194
Query: 206 gctaaaaagtcaac 219
|||||||||||
Sbjct: 195 ttaaaaaagtcaac 208
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 55 acatgtttgaccgttcgtcttattcaaaaa 84
|||||||| |||||||||||||||||||||
Sbjct: 194 acatgtttaaccgttcgtcttattcaaaaa 165
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa Indica
Group
Length = 238
Score = 194 bits (98), Expect = 4e-49
Identities = 208/241 (86%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||||| || |||| ||| |||||||||| |||| | ||||||||||| |
Sbjct: 1 atactccctccgtatctaaatatttaacgccgttgatttttttaa-acatgtttgactat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
| ||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 60 ttatcttattaaaaaa--ttaaataattattaattcctttcctatcatttgattcattgt 117
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 118 taaatatattttcatgtatacatatagttttacatatttcacaaaa-tttttgaataaga 176
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagt 248
||| ||| ||| ||||||||||||||||||| |||||| |||| |||||| || ||||
Sbjct: 177 cgaatggtcaaacttgtgctaaaaagtcaacggggtcaaatatttagaaacgaagcgagt 236
Query: 249 a 249
|
Sbjct: 237 a 237
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||| || |||||| |||| |||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 237 tactcgcttcgtttctaaatatttgaccccgttgacttttta-gcacaagtttgaccatt 179
Query: 70 cgtcttattcaaaaa 84
|||||||||||||||
Sbjct: 178 cgtcttattcaaaaa 164
>RF01058;MIR806;AAAA02017468.1/3478-3717 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 164/186 (88%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
||||||||| |||||| || || ||||||||||| ||||||||||||||||||| |||||
Sbjct: 47 atgtttgactgttcgttttctttaaaaaatttaaataattattaattcttttccaatcat 106
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
|||||||||||||||||||| || ||| | |||||| || ||||||||||||||||||
Sbjct: 107 ttgattcattgttaaatatacttatatgtatacatatagttctacatatttcacaaaagt 166
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
||||||||||| ||||||| ||| |||||||||||||||||||| ||| || |||| ||
Sbjct: 167 atttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggcgtcgaatatttaga 226
Query: 237 aacgga 242
||||||
Sbjct: 227 aacgga 232
Score = 83.8 bits (42), Expect = 1e-15
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtctta 76
|||||||| |||| || |||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 232 tccgtttctaaatattcgacgccgttgacttttta-gcacatgtttgaccgttcgtctta 174
Query: 77 ttcaaa 82
||||||
Sbjct: 173 ttcaaa 168
>RF01058;MIR806;AC025905.3/69305-69556 4530:Oryza sativa (rice)
Length = 252
Score = 194 bits (98), Expect = 4e-49
Identities = 162/182 (89%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 57 atgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcat 116
|||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 48 atgtttgaccgttcgttttattcaaaaaatttaagtaactattaattattttcctatca- 106
Query: 117 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 176
||||||||||||||||||||||| ||| | |||||| |||||||||||||| |||||
Sbjct: 107 ttgattcattgttaaatatatttatatgtatacatatagttttacatatttcatcaaagt 166
Query: 177 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcga 236
| |||||||||||||| ||| |||||||| ||||||||| |||||||| ||| |||| ||
Sbjct: 167 tgttgaataagatgaatggtcaaatatgtactaaaaagttaacggtgttaaatatttaga 226
Query: 237 aa 238
||
Sbjct: 227 aa 228
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 194 bits (98), Expect = 4e-49
Identities = 170/193 (88%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 58 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 117
||||||||| |||||||||| |||||| |||||||||||| |||||||| |||||||
Sbjct: 48 tgtttgaccattcgtcttatctaaaaaaagtaagtaattatttattctttttatatcatt 107
Query: 118 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 177
||||||| ||||||||||| ||||||| | |||||| ||||||| |||||| || ||
Sbjct: 108 tgattcactgttaaatatactttcatgtacacatatagttttacacatttcataat--tt 165
Query: 178 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaa 237
||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 166 ttttaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 225
Query: 238 acggagggagtac 250
|||||||||||||
Sbjct: 226 acggagggagtac 238
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| ||||||||||| |||||||| |||| ||||||||||| ||||||
Sbjct: 237 tactccctccgtttcaaaatgtttgacaccgttgac-tttttagcacatgtttaaccgtt 179
Query: 70 cgtcttattcaaaaaatt 87
||||||||| ||||||||
Sbjct: 178 cgtcttattaaaaaaatt 161
>RF01058;MIR806;AAAA02004683.1/195-434 39946:Oryza sativa Indica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 173/194 (89%), Gaps = 3/194 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||| |||| |||||||||| |||||| | |||||| ||||||| ||||||| ||||||
Sbjct: 17 aaatatttggcgccgttgactttttaaa-atatgttttaccgttcatcttatttaaaaaa 75
Query: 86 tttaagtaattattaa-ttcttttcctatcatttgattcattgttaaatatattttcatg 144
|||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||
Sbjct: 76 tttaagtaattattaattttttttcctatcatttgattcattgttaaatatatttttatg 135
Query: 145 caggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatg 204
| ||||| |||||||||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 136 tatatatatagttttacatatttcacaaatgttttt-aataagatgaacggttaaacata 194
Query: 205 tgctaaaaagtcaa 218
||||||||||||||
Sbjct: 195 tgctaaaaagtcaa 208
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 176 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 221
||||| ||||||||||||||| ||| || | ||||||||||||||
Sbjct: 74 tttttaaataagatgaacggtaaaacatattttaaaaagtcaacgg 29
>RF01058;MIR806;AP005159.3/54283-54522 39947:Oryza sativa Japonica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 200/233 (85%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||| ||||| |||| ||||||| ||||||| |||||| | ||| |||| |||
Sbjct: 2 tactccctcagtttctaaatatttgacgtcgttgactttttaa--atatgcatgacagtt 59
Query: 70 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 129
|||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 60 cgtcttattcaaaaaatttaagtaattattaattatttttatatcatttgattcattgtt 119
Query: 130 aaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataagat 189
||||||| ||| ||||| | |||| ||||| |||||| ||||||||||||||||||||
Sbjct: 120 aaatatacttttatgcatacgtatagttttaaatatttaacaaaagtttttgaataagac 179
Query: 190 gaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
||||| |||||| | |||| |||||||| ||||||| |||| ||||||||
Sbjct: 180 tcacggtcaaatatttactaagaagtcaacactgtcaaatatttagaaacgga 232
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacatttcgaaacggagggagta 249
||||||||||||| |||||| |||| ||||| |||||||||
Sbjct: 43 taaaaagtcaacgacgtcaaatatttagaaactgagggagta 2
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 194 bits (98), Expect = 4e-49
Identities = 168/190 (88%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 60 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct: 52 tttgaccgttcgtcttattaaaaaaatt-aagtaattattaattattttcctatcatttg 110
Query: 120 attcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttt 179
|||||| ||||||||||||| ||| | |||||| |||||||||||||| ||| ||||
Sbjct: 111 attcatggttaaatatatttatatgtatacatatagttttacatatttcataaatttttt 170
Query: 180 tgaataagatgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaac 239
| | ||||| ||| || ||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 171 ttagtaagacaaacagtcaaacatgtgctaaaaagtcaacggtgtcaaatatttggaaac 230
Query: 240 ggagggagta 249
||||||||||
Sbjct: 231 ggagggagta 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgtt 69
||||||||||||||| |||| |||||| |||||||| |||| |||||||||||||| |||
Sbjct: 240 tactccctccgtttccaaatatttgacaccgttgac-tttttagcacatgtttgactgtt 182
Query: 70 cgtcttattcaaaaaa 85
|||||| | ||||||
Sbjct: 181 tgtcttactaaaaaaa 166
>RF01058;MIR806;AACV01015692.1/289-51 39947:Oryza sativa Japonica
Group
Length = 239
Score = 194 bits (98), Expect = 4e-49
Identities = 177/202 (87%), Gaps = 1/202 (0%)
Strand = Plus / Plus
Query: 32 ttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaag 91
|||||||||||||| |||| | ||||||||||||||| || ||||||||||||||||||
Sbjct: 24 ttgacgccgttgacttttttaa-acatgtttgaccgtttgtattattcaaaaaatttaag 82
Query: 92 taattattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcat 151
||||||||||||||||||||||||||||||||||||||||||||| || ||| | |||
Sbjct: 83 taattattaattcttttcctatcatttgattcattgttaaatatacttatatgtacacat 142
Query: 152 ataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaa 211
||| |||||||||||||| |||||||||||||||||| ||| || ||| |||| |||
Sbjct: 143 atagttttacatatttcagaaaagtttttgaataagacgaatggacaaacatgtttaaaa 202
Query: 212 aagtcaacggtgtcaaacattt 233
|| ||||| | |||||||||||
Sbjct: 203 aaatcaacagcgtcaaacattt 224
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 84
||||||||||||| ||||| |||| | ||||||||| || |||||||||||||||||
Sbjct: 224 aaatgtttgacgctgttgatttttttaa-acatgtttgtccattcgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02013444.1/303-543 39946:Oryza sativa Indica
Group
Length = 241
Score = 194 bits (98), Expect = 4e-49
Identities = 201/234 (85%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgtttcgaaatgtttgacgccgttgacattttaagcacatgtttgaccgt 68
||||||||||| |||| |||| ||||||| ||||||| |||| | |||||||||| | |
Sbjct: 1 atactccctccatttctaaatatttgacgtcgttgacttttttaa-acatgtttgatcat 59
Query: 69 tcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgt 128
|| | ||||| |||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 60 tcattttattaaaaaaaatcaagtaattattaattattttcctatcatttgattcattgt 119
Query: 129 taaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataaga 188
|||||||| ||| ||| | ||||| ||||| ||||||||||||||||||||||||| |
Sbjct: 120 taaatatacttttatgtacatatatagttttatatatttcacaaaagtttttgaataata 179
Query: 189 tgaacggttaaatatgtgctaaaaagtcaacggtgtcaaacatttcgaaacgga 242
|| ||||||| |||||||||||| |||||| ||||||| |||| ||||||||
Sbjct: 180 cgactggttaaagatgtgctaaaaattcaacgatgtcaaatatttagaaacgga 233
>RF01058;MIR806;AP004328.2/94555-94317 39947:Oryza sativa Japonica
Group
Length = 239
Score = 194 bits (98), Expect = 4e-49
Identities = 195/225 (86%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 26 aaatgtttgacgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 85
|||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||
Sbjct: 18 aaatgtttgacgccgttgactttttaa--aaatgtttgaccgttcgtcttattaaaaaaa 75
Query: 86 tttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgc 145
|| |||||||| ||||||||||| |||| |||||||| ||||||||||||| ||| |||
Sbjct: 76 tt-aagtaattgttaattctttttctattatttgatttattgttaaatatacttttatgt 134
Query: 146 aggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgt 205
| |||||| ||||||| || |||||||| ||||||||||| ||||||||| |||||| |
Sbjct: 135 atacatatagttttacacatatcacaaaaatttttgaataaaatgaacggtcaaatatat 194
Query: 206 gctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtac 250
|||||||||| ||||||||||||| || | |||||||||||
Sbjct: 195 ttaaaaaagtcaatagtgtcaaacatttagagaaggagggagtac 239
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 208 taaaaagtcaacggtgtcaaacattt 233
|||||||||||||| |||||||||||
Sbjct: 43 taaaaagtcaacggcgtcaaacattt 18
