miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 319 bits (161), Expect = 1e-86
Identities = 223/240 (92%), Gaps = 4/240 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 tactctctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgt--gtacatgaaaatatattt 127
| |||||| ||| |||||| | |||||||||||||||| | |||||||||| |||||||
Sbjct: 180 gacttattaaaa-aaatttataaaatatgtaaaactatatatgtacatgaaagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagacg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 aatgatcatacacgtacttaaaaagtcaacggtgtcaaatattttaaaacggagggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||| |||| ||||||||| || || ||||||||||||||||||||||||||
Sbjct: 167 ttttttaataagtcgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
Score = 67.9 bits (34), Expect = 7e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgt 67
||||||||||||||| ||||| ||||||| |||||||||||| || || ||| ||| | |
Sbjct: 1 gtactccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcat 60
Query: 68 tcgtcttattcaaa 81
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 317 bits (160), Expect = 4e-86
Identities = 206/219 (94%), Gaps = 3/219 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 243 tactccctccgtttcaaaatgttcgacaccgttgactttttaacacatgtttgaccgttc 184
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| ||| || ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 183 gtcttattcaaaaaaaattatgaaatatgtaaaactatatgtgtacatgaaagtatattt 124
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 123 aacaatgaatcaaatgatatgaaaagaataaataattaattaaattttttgaataagacg 64
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaa 225
|||||||||||||||||||||||| ||| ||||||||||
Sbjct: 63 aatggtcaaacacgtacttaaaaaatcatcggtgtcaaa 25
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 170 tttttgaataagacgaacggtcaaacatgtg-ttaaaaagtcaacggtgtcgaacatttt 228
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 229 gaaacggagggagtat 244
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 313 bits (158), Expect = 7e-85
Identities = 204/217 (94%), Gaps = 3/217 (1%)
Strand = Plus / Minus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgacattttagcacatgtttaaccgttcgtcttattcaa 170
Query: 81 acaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatc 138
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 169 ttttttttgtgaaatatgtaaaactatatgtgtatatgaaaatatatttaacaatgaatc 110
Query: 139 aaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaac 197
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 109 aaatgatatgaaaagaataaataattaattaaattttttaaataagacgaatggtcaaac 50
Query: 198 acgtacttaaaaagtcaacggtgtcaaacattttgaa 234
|||||||||||||||||||||||||||||||||||||
Sbjct: 49 acgtacttaaaaagtcaacggtgtcaaacattttgaa 13
Score = 65.9 bits (33), Expect = 3e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 22 ttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgtcttatt 77
|||||||||||||||| |||||||||||| || || ||||||||| |||||||||||
Sbjct: 13 ttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttatt 69
Score = 60.0 bits (30), Expect = 2e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
||||||||||| ||| ||||| || || |||| |||||||||||||||||||||||||
Sbjct: 173 aataagacgaacggttaaacatgtgct-aaaatgtcaacggtgtcaaacattttgaaa 229
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 311 bits (157), Expect = 3e-84
Identities = 223/240 (92%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||
Sbjct: 239 tactccctccgtatcaaa-tgtttgacattgttgactttttagcacatgtttaaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 atcttattcaaaagaatctgtgaaatatgtaaaactatgtgtgtacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 120 aataatgaatcaaacgatgtgaaaagaataaataattacttaaattttttaaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 60 aatggtcaaacacgtac-taaaaagtcaacggtgtcaaacattatgaaatggatggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||| ||||| ||||||||||| |||||||||||||| || ||||||||| |||
Sbjct: 2 tactccatccatttcataatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AAAA02018250.1/70399-70160 39946:Oryza sativa Indica
Group
Length = 240
Score = 309 bits (156), Expect = 1e-83
Identities = 220/239 (92%), Gaps = 3/239 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||
Sbjct: 239 tactccctccgtttcaaaatggttggtatcgttgacgttttagcacatgtttgactgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||| | ||| ||||||| ||||||||||||||||| |||||||| ||| |||||||
Sbjct: 179 gtcttaataaaaaaaatttgcgaaatatgtaaaactatatgtgtacataaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct: 119 aacaatgaatcaaatgatataaaaagaataaatagttacttaatttttttaataagacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 59 atggttaaacacgtac-taaaaagtcaacggtgtcaaatattttgaaacggatggagta 2
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||| ||||||||||||| ||||||| |||||||||||||| || ||||| ||| ||
Sbjct: 1 gtactccatccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||| ||||||||| |||||||| || || |||| ||||||| | ||| ||||||
Sbjct: 166 ttttttattaagacgaacagtcaaacatgtgct-aaaacgtcaacgataccaaccatttt 224
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 225 gaaacggagggagta 239
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 305 bits (154), Expect = 2e-82
Identities = 223/241 (92%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||| ||||||||| |||||||| |||| |||||| |||||||||||| ||||||||||
Sbjct: 240 gtacttcctccgttttaaaatgttcgacaccgttgattttttagcacatatttgaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 180 catcttattcaaaaaaatt-gtgaaatatgtaaaactatatgtgtacatgaaaatatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaat-tttttaataagac 185
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct: 121 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatgatttgaataaaac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 61 gaatggtcaaacacgta-ttaaaaagttaacggtgtcaaacattttgaaacggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||| |||||||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttaactttttaatacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
|| |||||||||
Sbjct: 62 gttttattcaaa 73
Score = 48.1 bits (24), Expect = 6e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||| ||| ||||||| | || || ||||| ||||||||||| ||||||||
Sbjct: 166 tttttgaataagatgaacggtcaaatatgtgctaaaaaa-tcaacggtgtcgaacatttt 224
Query: 232 gaaacgga 239
|||||||
Sbjct: 225 aaaacgga 232
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 297 bits (150), Expect = 4e-80
Identities = 216/233 (92%), Gaps = 5/233 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||
Sbjct: 239 tactccctccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccattc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||||| | ||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 179 atcttagttaaaaaaatt-gtgaaatatgtaaaactatatgtgtacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaatcagatgagatgaaaagaataaataattacttaaattttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 60 aatggtcaaacacgtgc-taaaaagtcaacggtgtcaaatattttgaaacgga 9
Score = 97.6 bits (49), Expect = 7e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||
Sbjct: 9 tccgtttcaaaatatttgacaccgttgactttttagcacgtgtttgaccattcgtcttat 68
Query: 77 tcaaa 81
|||||
Sbjct: 69 tcaaa 73
Score = 73.8 bits (37), Expect = 1e-12
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 172 ttttttaa-taagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
|||||||| ||||| ||||||||||||| | || ||||||||||||| |||||||||||
Sbjct: 165 ttttttaactaagatgaatggtcaaacatatgct-aaaaagtcaacggcgtcaaacattt 223
Query: 231 tgaaacggatggagtat 247
||||||||| |||||||
Sbjct: 224 tgaaacggagggagtat 240
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 297 bits (150), Expect = 4e-80
Identities = 222/241 (92%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||| ||| || |||| |||||||||||||| |||||||||||
Sbjct: 239 tactccctccgttttaaaatatttatcaccgttaactttttagcacatatttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgt--acatgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 179 gtcttattaaaa-aaatttgtgaaatatgtaaaactatgtgtgtacataaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||| ||||||||||||| |||| ||||| ||||||||| ||| ||||||||||
Sbjct: 60 aatggtcaaatacgtacttaaaaa-tcaatggtgttaaacattttaaaatggatggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||| | || | |||||||| ||||||| ||| |||||
Sbjct: 166 ttttttaataagacgaacggtcaaatatgtgc-taaaaagttaacggtgataaatatttt 224
Query: 232 gaaacggatggagtat 247
||||||| |||||||
Sbjct: 225 aaaacggagggagtat 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||| ||| ||||||||| ||| | |||| |||| || || | ||||||| |||
Sbjct: 2 tactccatccattttaaaatgtttaacaccattgatttttaagtacgtatttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 297 bits (150), Expect = 4e-80
Identities = 221/241 (91%), Gaps = 4/241 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||||||| | |||||||||||||||||| ||| || |||||||||||||||||
Sbjct: 180 gtcttattcaaaaatttttgtgaaatatgtaaaattatatgcctacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|| ||| ||||| || | |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 60 aacggttaaacatgtgc-taaaaagtcaacggtgtcaaacatttcaaaacggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 111 bits (56), Expect = 5e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 2 tactccctccgttttgaaatgtttgacaccgttgactttttagcacatgtttaaccgttc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 93.7 bits (47), Expect = 1e-18
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| ||||||||||| ||||||||| || || |||||||||||||||||||||||
Sbjct: 164 aaatttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacat 222
Query: 229 tttgaaacggatggagtat 247
|| |||||||| |||||||
Sbjct: 223 ttcgaaacggagggagtat 241
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 293 bits (148), Expect = 6e-79
Identities = 209/226 (92%), Gaps = 5/226 (2%)
Strand = Plus / Minus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||| ||
Sbjct: 224 aaaatgtttgacaccgttgactttttagcacatgtttgaccatttgtcttattaaaaaaa 165
Query: 85 atttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatcaaat 142
||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 164 --ttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaattaaat 107
Query: 143 gatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgt 201
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 106 gatatgaaaagaataaataattacttaaattttttaaataagacgaatggtcaaatacgt 47
Query: 202 acttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 46 acttaaaaagtcaacggtgccaaatgttttgaaacggagggagtat 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| |||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 166 ttttttaataagacaaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 224
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
||||||||||||||||||| |||| || |||||||||||| || || | ||||||| ||
Sbjct: 2 tactccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccatt 61
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 62 cgtcttatt 70
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 291 bits (147), Expect = 2e-78
Identities = 221/242 (91%), Gaps = 4/242 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||||||||||||||||||| || |||| |||||||||||||||||| ||| ||
Sbjct: 241 gtactccctccgtttcaaaatgttatgcaccgttcactttttagcacatgtttcaccatt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 181 cgtcttattcaaaaaaaattgtgaaatatgtaaaaccatatttgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 121 taacaatgaatcaaataatatgaaaataataaataatttgttaaattttttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||
Sbjct: 61 gaatggtcaaacacgtac-taaaaagtaaacggtgtcaaacattttgaaacggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||| ||||||||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgtttactttttagtacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||||| ||||| || || ||||||| ||||||| ||||||||
Sbjct: 167 tttttgaataagacgaatggtgaaacatgtgct-aaaaagtgaacggtgcataacatttt 225
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 226 gaaacggagggagta 240
>RF01058;MIR806;AP005190.3/32973-32734 39947:Oryza sativa Japonica
Group
Length = 240
Score = 291 bits (147), Expect = 2e-78
Identities = 219/239 (91%), Gaps = 3/239 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactctttagcacatgtttgactgttc 180
Query: 70 gtcttattcaaacaaa-tttgtgaaatatgtaaaactatgtgtacatgaaaatatattta 128
|||||||| ||| ||| ||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 179 gtcttatttaaaaaaaatttatgaaatatatacaactatgtgtacatgaaaatatattta 120
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacga 187
||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 119 acaatgaatcaaatgatatgagaagaataagtaattacttaaatttttttaataagacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||| ||||||| || || ||| | ||||||||||||||||||||||| || ||||||
Sbjct: 59 atggtaaaacacgcac-tacaaaattaacggtgtcaaacattttgaaacagagggagta 2
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||||| || || ||| ||||||||||||||||||||||
Sbjct: 166 tttttaaataagacgaacagtcaaacatgtgct-aaagagtcaacggtgtcaaacatttt 224
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 225 gaaacggagggagta 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||||||||||||||||| |||| | ||| ||| | ||||| ||| |||
Sbjct: 2 tactccctctgtttcaaaatgtttgacaccgttaattttgtagtgcgtgttttaccattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 291 bits (147), Expect = 2e-78
Identities = 208/226 (92%), Gaps = 3/226 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||||||||| ||| |||||||||||| | || ||||||||||||| ||
Sbjct: 232 cctccgtttcaaaatgtttcacactattgactttttagtaaatatttgaccgttcgtatt 173
Query: 75 attcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaa 132
||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 172 attcaaaaaagtttgtgaaatgtgtaaaactatatgtgtacatgaaagtatatttaacaa 113
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggt 192
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 112 tgaatcaaatgatatgaaaagaataaataattacttaatttttttaataagacgaatggt 53
Query: 193 caaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 52 caaacacgta-ttaaaaagtcaacgatgtcaaatattttgaaacgg 8
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 8 ccgtttcaaaatatttgacatcgttgactttttaatacgtgtttgaccattcgtcttatt 67
Score = 48.1 bits (24), Expect = 6e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| ||||||| | |||| |||||||||| |||| |||||||||
Sbjct: 164 tttttgaataatacgaacggtcaaatatttact-aaaaagtcaatagtgtgaaacatttt 222
Query: 232 gaaacgga 239
||||||||
Sbjct: 223 gaaacgga 230
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 287 bits (145), Expect = 4e-77
Identities = 214/234 (91%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgactccgttgactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||||| || |||||||||||||||||||||| ||||||||||||||| | |||||
Sbjct: 180 ttcttatt--aaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaagtttattt 123
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagac 185
||| || ||| |||||||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 122 aacgattaattaaatgatatgaaaaaaataaataattacttaactttttttaaataagac 63
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||| |||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 62 gaacggtcaaacacttacttaaaaagtcaacggtgtcaaacatttcgaaacgga 9
Score = 91.7 bits (46), Expect = 5e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||||||||||| ||| ||||||||| || || ||||||||||||| |||||||||
Sbjct: 164 aaattttttaataagaagaacggtcaaacatgtgct-aaaaagtcaacggagtcaaacat 222
Query: 229 tttgaaacggatggagta 246
||||||||||| ||||||
Sbjct: 223 tttgaaacggagggagta 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgt 71
|||||||||||| |||||||||||| |||||||||||| || | |||||||||||||||
Sbjct: 5 tccctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgt 64
Query: 72 cttatt 77
||||||
Sbjct: 65 cttatt 70
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 287 bits (145), Expect = 4e-77
Identities = 185/196 (94%), Gaps = 3/196 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 243 tactccatccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttt 184
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 183 gtcttattcaaaataatttgtaaaatatgtaaaactatatatgtacatgaaaatatattt 124
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacg 186
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 123 tacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttttaataagacg 64
Query: 187 aatggtcaaacacgta 202
||||||||||||||||
Sbjct: 63 aatggtcaaacacgta 48
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| |||||||| || ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 171 ttttgaataagacaaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattttg 229
Query: 233 aaacggatggagtat 247
|||||||||||||||
Sbjct: 230 aaacggatggagtat 244
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 287 bits (145), Expect = 4e-77
Identities = 176/185 (95%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 63 accgttcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaata 122
||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||| ||
Sbjct: 186 accgttcgtcttattcaaaaaattttgtgaaatatgtaaaactatatgtacattaaagta 127
Query: 123 tatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aata 181
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 126 tatttaacaatgaatcaaatgatatgaaaagaataaataattatttaaattttttgaata 67
Query: 182 agacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatg 241
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 66 agacgaatgatcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggagg 7
Query: 242 gagta 246
|||||
Sbjct: 6 gagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
|||||||||||||||||||||||||||| |||||||||||| || || ||||||| | ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcatt 61
Query: 69 cgtcttattcaaa 81
|||||||||||||
Sbjct: 62 cgtcttattcaaa 74
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 218 gtgtcaaacattttgaaacggatggagta 246
|||||||||||||||||||||| ||||||
Sbjct: 199 gtgtcaaacattttgaaacggagggagta 227
>RF01058;MIR806;AP005878.2/90818-90583 39947:Oryza sativa Japonica
Group
Length = 236
Score = 287 bits (145), Expect = 4e-77
Identities = 212/228 (92%), Gaps = 6/228 (2%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 236 ctccatccgtttcaaaatatttgacaccgttgactttttagcacatgtt-gaccgttcgt 178
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaa 129
|||||| ||| ||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 177 cttattaaaaaaaatttgtgaaatatataaaactatatgtgtacatgaaagtatatttaa 118
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacgaa 188
|||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 117 caataaatcaaatgatatgaaaa-aataaataatttcttaaatttttttaataagacgaa 59
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 58 tggtcaaacacgtac-taaaaagtcaacggtgtcaaacatcttgaaac 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| |||||| || || || |||||||||||||||||||| |||||
Sbjct: 166 ttttttaataagacgaacggtcaa-catgtgct-aaaaagtcaacggtgtcaaatatttt 223
Query: 232 gaaacggatggag 244
|||||||||||||
Sbjct: 224 gaaacggatggag 236
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 20 gtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 12 gtttcaagatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttatt 69
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 283 bits (143), Expect = 6e-76
Identities = 217/238 (91%), Gaps = 4/238 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 237 tccctccgtttcaaaatgtttgacactgttgactttttagcacatatttgaccgttcgtc 178
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaac 130
||||||||| || |||||||||||| |||||| ||||||| ||||||| |||||||||
Sbjct: 177 ttattcaaaaaattttgtgaaatatataaaactatatgtgtgcatgaaagtatatttaat 118
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 117 aatgaatcaaatgatatgaaaagaacaaataattacttaaattttttaaataagacgaat 58
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||| ||| |||||| ||||| || ||||| ||||||||| ||| |||||||
Sbjct: 57 ggtcaaacacatac-taaaaaatcaacagtttcaaatattttgaaatggagggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 167 tttttgaataagacgaacggtcaaatatgtgct-aaaaagtcaacagtgtcaaacatttt 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||||||||| ||||| | ||||| ||||||| | ||||||||| |||
Sbjct: 2 tactccctccatttcaaaatatttgaaactgttgattttttagtatgtgtttgaccattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 281 bits (142), Expect = 2e-75
Identities = 221/244 (90%), Gaps = 5/244 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaa-tgtttgacatcgttgactttttagcacatgtttgaccgt 67
|||| ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 244 gtacaccctccgtttcaaaaatgtttaacaccgttgactttttaacacatgtttgaccgt 185
Query: 68 tcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatat 125
|||| ||||| ||| |||| |||||||||| ||||||||| |||| |||||||||||||
Sbjct: 184 tcgtattattaaaaaaaatctgtgaaatatataaaactatatgtatgcatgaaaatatat 125
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaa--ttttttaataag 183
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 124 ttaacaatgaatcaaatgatatgaaaagaataaataattactcaaaatttttttaataag 65
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatgga 243
||||||||||| ||||||| || |||||| |||||||||||||||||| ||| ||| |||
Sbjct: 64 acgaatggtcacacacgtattttaaaagttaacggtgtcaaacattttaaaatggaggga 5
Query: 244 gtat 247
||||
Sbjct: 4 gtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 62/69 (89%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaaca-ttt 230
||||||||||| ||||| ||||||||| || |||||||||||||||||| ||||| |||
Sbjct: 169 ttttttaataatacgaacggtcaaacatgtg-ttaaaaagtcaacggtgttaaacatttt 227
Query: 231 tgaaacgga 239
|||||||||
Sbjct: 228 tgaaacgga 236
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttt 49
|||||||||| ||| ||||||||||||| |||| ||||||
Sbjct: 2 tactccctccattttaaaatgtttgacaccgttaactttt 41
>RF01058;MIR806;AC105770.2/63257-63496 39947:Oryza sativa Japonica
Group
Length = 240
Score = 281 bits (142), Expect = 2e-75
Identities = 210/230 (91%), Gaps = 2/230 (0%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||| ||||||| ||||||||||||| || | ||||||| || |||||||
Sbjct: 231 tccgtttcaaaatatttgacaccgttgactttttaacatacgtttgactatttgtcttat 172
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaacaatgaa 136
| ||| ||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 171 taaaa-aaatttgtgaaatatgtaaaactatatgtgtataaaaatatatttaacaatgaa 113
Query: 137 tcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaaa 196
||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 112 tcaaatgatataaaaagaataaataattacttaatttttttaataagacgaacggtcaaa 53
Query: 197 cacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 52 cacgtac-taaaaagttaacggtgtcaaacattttgaaacggagggagta 4
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||
Sbjct: 3 gtactccctccgtttcaaaatgtttgacaccgttaactttttagtacgtgtttgaccgtt 62
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 63 cgtcttatt 71
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/73 (90%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtac-ttaaaaagtcaacggtgtcaaacattt 230
|||||||||||||| ||| ||||||| ||| |||||||||||||||||||||| ||||
Sbjct: 165 ttttttaataagacaaatagtcaaac--gtatgttaaaaagtcaacggtgtcaaatattt 222
Query: 231 tgaaacggatgga 243
|||||||||||||
Sbjct: 223 tgaaacggatgga 235
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 281 bits (142), Expect = 2e-75
Identities = 209/230 (90%), Gaps = 11/230 (4%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||
Sbjct: 247 tactccctccgtttcaaaatatttgacaccgttaactttttagcacatgtttgaccgttc 188
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 187 gtcttattcaaa-aaatttgtgaaatatgtaaaactatatgtgtatatgaaagtatattt 129
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaa--------attttttaa 179
||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttaaatatttttgaa 69
Query: 180 taagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatt 229
|||||||||||||||||||| | |||||||| |||||||||| |||||||
Sbjct: 68 taagacgaatggtcaaacacatgcttaaaaaatcaacggtgttaaacatt 19
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || || ||||||| |||||||||||| |||||
Sbjct: 174 tttttgaataagacgaacggtcaaacatgtgct-aaaaagttaacggtgtcaaatatttt 232
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 233 gaaacggagggagta 247
Score = 48.1 bits (24), Expect = 6e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 27 aatgtttgacatcgttgacttttta-gcacatgtttgaccgttcgtcttattcaaa 81
||||||| ||| |||||| |||||| ||| ||||||||| |||||||||||||||
Sbjct: 19 aatgtttaacaccgttgattttttaagcatgtgtttgaccattcgtcttattcaaa 74
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 280 bits (141), Expect = 9e-75
Identities = 209/228 (91%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||| || ||||||||||||||| || ||||||||||||||||||| ||
Sbjct: 227 tttcaaaatgtttaacgcagttgactttttagcatatatttgaccgttcgtcttattaaa 168
Query: 81 acaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatc 138
| ||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 167 aaaaatt-gtgaaatatgtaaaactatatgtgtacttgaaagtatatttaacaatgaatc 109
Query: 139 aaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaaaca 198
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aaataatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaaaca 49
Query: 199 cgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||| ||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 48 tgtac-taaaaagtcaacggtatcaaatattttgaaacggagggagta 2
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||| ||
Sbjct: 1 gtactccctccgtttcaaaatatttgataccgttgactttttagtacatgtttgaccatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
Score = 48.1 bits (24), Expect = 6e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||| | | | |||||||||||| | || |||||||||
Sbjct: 165 ttttttaataagacgaacggtcaaatatatgc-taaaaagtcaactgcgttaaacatttt 223
Query: 232 gaaa 235
||||
Sbjct: 224 gaaa 227
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 280 bits (141), Expect = 9e-75
Identities = 218/240 (90%), Gaps = 4/240 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||| ||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 238 tactccatccgttttaaaatatttaacaccgttaactttttagtacatatttgaccgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 178 gtcttattcaaa-aaatttgtgaaatatgtaaaattatatgtgtacatgaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 119 aacaataaattaaattgtatgaaaagaataaataattacttaatttttttaataagacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 atagtcaaacacgta-ataaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttattacgtgtttgactattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||| | ||||| ||||||| |||||||| ||| |||||
Sbjct: 165 tttttgaataagacgaacggtcaaatatgtact-aaaaagttaacggtgttaaatatttt 223
Query: 232 gaaacggatggagtat 247
|||||||||||||||
Sbjct: 224 aaaacggatggagtat 239
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 278 bits (140), Expect = 4e-74
Identities = 217/240 (90%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||| |||||||| ||||| ||||||| |||| | |||||||||||| ||| ||| ||
Sbjct: 239 gtactcactccgttttaaaatatttgacaccgttaattttttagcacatatttaaccatt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatattta 128
||||||||| ||| |||| ||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 179 cgtcttatttaaaataattagtgaaatatgtaaaattatgtgtacatgaaagtatattta 120
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacga 187
||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 119 acaatgaattaaatgatatgaaaagaataaataattacttaaactttttgaataagatga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 59 atggttaaacacgtac-taaaaagtcaacggtgtcaaatattttgaaacggagggagtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| |||||||||||||| || ||||| ||| |||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccattc 61
Query: 70 gtcttattcaaa 81
|||||||||||
Sbjct: 62 atcttattcaaa 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| ||||||||||||||| ||| | || || ||||| | |||||||||||| |||||
Sbjct: 166 ttttaaataagacgaatggttaaatatgtgctaaaaaatt-aacggtgtcaaatatttta 224
Query: 233 aaacgga 239
|||||||
Sbjct: 225 aaacgga 231
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 278 bits (140), Expect = 4e-74
Identities = 199/214 (92%), Gaps = 6/214 (2%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||
Sbjct: 233 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgctcatctt 174
Query: 75 attcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaa 132
||| ||| || ||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 173 attaaaaaaa--ttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaa 116
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatgg 191
|||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 115 tgaatcaaatgatatgaagaggataaataattatttaaattttttaaataagacgaatgg 56
Query: 192 tcaaacacgtacttaaaaagtcaacggtgtcaaa 225
||||||||||| ||||||||||||||||||||||
Sbjct: 55 tcaaacacgta-ttaaaaagtcaacggtgtcaaa 23
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| || ||||||||| || || ||||||||||||||||||||||||||
Sbjct: 165 ttttttaataagatgagcggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 223
Query: 232 gaaacgga 239
||||||||
Sbjct: 224 gaaacgga 231
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 31 tttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||| ||||||||||||| || ||||||||| |||||||||||
Sbjct: 23 tttgacaccgttgactttttaatacgtgtttgaccattcgtcttatt 69
>RF01058;MIR806;AAAA02033862.1/6052-6288 39946:Oryza sativa Indica
Group
Length = 237
Score = 274 bits (138), Expect = 6e-73
Identities = 216/239 (90%), Gaps = 6/239 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||||||||| ||||||| | || ||||||||||||||||||||||||||
Sbjct: 236 tactccctctatttcaaaatatttgacaccattaactttttagcacatgtttgaccgttc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| || ||||||||| ||||||||| ||||||||||||||| |||||||
Sbjct: 176 gtcttattcaaaaaagtttgtgaaacatgtaaaactatatgtgtacatgaaagtatattt 117
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 116 aacaatgaatcaaatgatttgaaaagaataaataattactt---ttttttaataaaacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||| |||||||||| ||| ||||||||||||||||||| |||| |||||| ||||||
Sbjct: 59 atggtaaaacacgtac-taagaagtcaacggtgtcaaacagtttgtaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||| |||| ||||||||| ||||||||| |||| || ||||| ||| |||
Sbjct: 2 tactccctccgttacaaactgtttgacaccgttgacttcttagtacgtgttttaccattc 61
Query: 70 gtcttatt 77
|| |||||
Sbjct: 62 gttttatt 69
Score = 56.0 bits (28), Expect = 3e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || | |||||||| || ||||||||| |||||
Sbjct: 163 tttttgaataagacgaacggtcaaacatgtgc-taaaaagttaatggtgtcaaatatttt 221
Query: 232 gaaa 235
||||
Sbjct: 222 gaaa 225
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 274 bits (138), Expect = 6e-73
Identities = 212/233 (90%), Gaps = 4/233 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 tactccctctattttaaaatatttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 180 gtcttattcaaaaatatttgtgaaatatgtaaaactatgtgtgtatatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataagacg 186
|| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||| |
Sbjct: 120 aataatgaatcaaatgatatgaaaggaataaataattacttgattttttttaataagatg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||||||| ||||||||||| | || ||||||||||||||||||||||
Sbjct: 60 aatggtcaaacatgtacttaaaaa-ttaatagtgtcaaacattttgaaacgga 9
Score = 65.9 bits (33), Expect = 3e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 171 attttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
|||||| ||||||||||| ||||||||| || || |||||||||||||||||||| ||||
Sbjct: 166 atttttgaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaatattt 224
Query: 231 t 231
|
Sbjct: 225 t 225
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||||||||||| || | |||| || |||||||||||| ||| ||||||
Sbjct: 9 tccgtttcaaaatgtttgacactattaatttttaagtacatgtttgaccattcatcttat 68
Query: 77 tcaaacaaat 86
| ||| ||||
Sbjct: 69 taaaaaaaat 78
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 272 bits (137), Expect = 2e-72
Identities = 218/242 (90%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| | ||||||||||||| || | || |||||||||||| | ||| ||| |||
Sbjct: 240 tactcccttcatttcaaaatgtttaacggccttaactttttagcacgtatttaaccattc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| || || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 gtcttattaaaaaaa--ttatgaaatatgtaaaactatatgtgtacatgaaaatatattt 123
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagac 185
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 122 aataatgaatcaaatgatatgaaaagaataaataattacttaaatttttttgaataagac 63
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 62 gaatggtcaaatacgtactaaaaaagtcaacggtgtcaaacattttgaaacggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgac-tttttagcacatgtttgaccgtt 68
|||||||||||||||||||||||||||| ||||||| ||||||| || | ||||||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccatt 61
Query: 69 cgtcttattcaaacaaattt 88
||||||||||||| ||||||
Sbjct: 62 cgtcttattcaaaaaaattt 81
Score = 48.1 bits (24), Expect = 6e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||| ||| |||| | |||||||| || | || |||||||||
Sbjct: 167 ttttttaataagacgaatggttaaatacgtgc-taaaaagttaaggccgttaaacatttt 225
Query: 232 gaaa 235
||||
Sbjct: 226 gaaa 229
>RF01058;MIR806;AACV01007621.1/52559-52322 39947:Oryza sativa
Japonica Group
Length = 238
Score = 272 bits (137), Expect = 2e-72
Identities = 216/239 (90%), Gaps = 5/239 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 237 tactccctccgtttcaaattatttaacatcgttgactttttagcacatatttgaccgttc 178
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgt--acatgaaaatatattt 127
||||||| ||| || || | |||||||||||||||| ||| ||||||||||||||||
Sbjct: 177 atcttattaaaaaaa--ttataaaatatgtaaaactatatgtgcacatgaaaatatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||| ||||||||| |||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 119 aacaacgaatcaaataatataaaaagaataaataattacttaatttttttaataagacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||| ||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 59 atgatcaaacacgta-ttaaaaagttaacgatgtcaaatattttgaaacggatggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||||||||| |||||||||||| |||||||| || ||||||| | |||
Sbjct: 2 tactccatccgtttcaaaatatttgacatcgttaactttttaatacgtgtttgatcattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| ||| ||||||| | || || |||||||||||| ||| ||| | |||
Sbjct: 164 ttttttaataagatgaacggtcaaatatgtgct-aaaaagtcaacgatgttaaataattt 222
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 223 gaaacggagggagtat 238
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 272 bits (137), Expect = 2e-72
Identities = 218/240 (90%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||
Sbjct: 239 tactccctccgttttaaaatgtttaacgccgttgactctttagcacatgtttggccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| |||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 179 gtcttattaaaa-aaatttataaaatatgtaaaactatatgtgtacatgaaaatatatta 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacg 186
|||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 120 aacaatgaatcaaatgatataaaaagattaaataattacttaaatttttttaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||| ||||||||| ||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 60 aatagtcaaacacatac-taaaaagttaacggcgtcaaacattttgaaacggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacgccgttaactttttagtatgtgtttgactattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| || |||||| || | |||| ||||||||| || |||||||||
Sbjct: 166 ttttttaataagacgaacggccaaacatgtgc-taaagagtcaacggcgttaaacatttt 224
Query: 232 gaaacggatggagtat 247
||||||| |||||||
Sbjct: 225 aaaacggagggagtat 240
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 270 bits (136), Expect = 9e-72
Identities = 204/223 (91%), Gaps = 4/223 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||||||| ||||||||||||| ||| ||||||||||||| ||||||||| |||||||||
Sbjct: 239 ctccctccatttcaaaatgtttaacaccgttgactttttaacacatgtttaaccgttcgt 180
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaa 129
|||||||| | || ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 179 cttattcataaaagtttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaa 120
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaa 188
||||||||||||||||||||||| |||||||| ||| ||||||||||| |||| || |||
Sbjct: 119 caatgaatcaaatgatatgaaaataataaatagttatttaaattttttgaataggatgaa 60
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 59 tggtcaaacacgtac-tagaaagtcaacggtgtcaaacatttt 18
Score = 61.9 bits (31), Expect = 4e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||| ||| ||||| || |||||||||||||||||| ||||||||||||| |
Sbjct: 174 aataagacgaacggttaaacatgtg-ttaaaaagtcaacggtgttaaacattttgaaatg 232
Query: 238 gatggag 244
|| ||||
Sbjct: 233 gagggag 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||||| |||||||||| ||| || ||||||||| ||| || ||||||||
Sbjct: 18 aaaatgtttgacaccgttgactttctagtacgtgtttgaccattcatcctattcaaa 74
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 268 bits (135), Expect = 4e-71
Identities = 212/234 (90%), Gaps = 4/234 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||||| || ||||||||||||||| ||||||| ||| |||
Sbjct: 240 tactccctccgtttcaaaatgtttgtcaccgttgactttttagctcatgtttaaccattc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 atcttattaaaaaaaaattgtgaaatatgtaaaactatatgtgtacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacg 186
|| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| | |
Sbjct: 120 aagaatgaatcaaatgatattaaaagaataaataattacttaaatttttttaataaaatg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggat 240
|||| ||||||||| | |||||| ||||||||||| |||||||||||||||||
Sbjct: 60 aatgaccaaacacgtgc-taaaaaatcaacggtgtctaacattttgaaacggat 8
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| ||||||| ||||| | || ||||||||||||||| ||||||||||
Sbjct: 167 ttttttaataagatgaatggttaaacatgagct-aaaaagtcaacggtgacaaacatttt 225
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 226 gaaacggagggagtat 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttg 62
|||||||||||||||| |||| |||||| |||||||||| ||||||
Sbjct: 9 tccgtttcaaaatgttagacaccgttgattttttagcacgtgtttg 54
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 268 bits (135), Expect = 4e-71
Identities = 212/233 (90%), Gaps = 6/233 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 238 gtactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 179
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||||||||| || ||| || |||||| |||||||| ||||||||||||||| ||||||
Sbjct: 178 cgtcttatt--aaaaaaattatgaaatgtgtaaaactatatgtgtacatgaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttta-ataagac 185
||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||
Sbjct: 120 taacagtgaatcaaatgatataaaaagaataaataattacttactttttttagataagac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||||||| ||| ||| |||||||| |||||||||||||| ||||||
Sbjct: 60 gaatggtcaaacacatac-taacaagtcaactgtgtcaaacattttaaaacgg 9
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| || || ||||||||||||||||||||||||||
Sbjct: 164 ttttttaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 222
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 223 gaaacggagggagta 237
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
|||||| ||||||||||||| |||||||| |||| | ||||||||| ||||||||||
Sbjct: 9 ccgttttaaaatgtttgacacagttgacttgttagtatgtgtttgaccattcgtcttat 67
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 268 bits (135), Expect = 4e-71
Identities = 211/230 (91%), Gaps = 6/230 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||| ||||||| |||||||| ||||| | |||| ||||||||| | |||||| ||||||
Sbjct: 239 gtacaccctccgcttcaaaatatttgataccgttaactttttagtatatgtttaaccgtt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 179 cgtcttattaaaaaaaatt-gtgaaatatgtaaaactatatgtgtacatgaaaatatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattt-tttaataagac 185
||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 120 taacaatgaatcaaatgatat-aaaagaataaataattacttaaatttgttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 61 gaatggtcaaacacgtac-taaaaagtgaacggtgtcaaacattttgaaa 13
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| | ||||||||||||||||| |||| ||||||||| || ||||||||| |||
Sbjct: 2 tactcccttcatttcaaaatgtttgacaccgttcactttttagtacgtgtttgaccattc 61
Query: 70 gtcttattcaa 80
|||||||||||
Sbjct: 62 gtcttattcaa 72
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| ||| |||||||| |||||| ||||| |||||
Sbjct: 165 ttttttaataagacgaacggttaaacatatac-taaaaagttaacggtatcaaatatttt 223
Query: 232 gaaacgga 239
||| ||||
Sbjct: 224 gaagcgga 231
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 268 bits (135), Expect = 4e-71
Identities = 205/225 (91%), Gaps = 5/225 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 239 tactccctccgtttcaaaatgtttgataccgttgactttttagcacatatttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaa--ctatgtgtacatgaaaatatattt 127
|||||||| ||| ||| ||||||||||||||||| ||||||||||| ||| | |||||
Sbjct: 179 gtcttattaaaataaaattgtgaaatatgtaaaattatatgtgtacatcaaagtttattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacg 186
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 119 aacaatgaatcaaatgatatgaaaataataaataattacttaaatttttttaataagacg 60
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||| ||||| ||| ||||||| || |||||||||||||||
Sbjct: 59 aatggtcgaacac--actaaaaaagttaatggtgtcaaacatttt 17
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 174 ttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttga 233
||||||||||||||| ||||||| | || || |||||||||||||| |||||||||||||
Sbjct: 168 ttttaataagacgaacggtcaaatatgtgct-aaaaagtcaacggtatcaaacattttga 226
Query: 234 aacggatggagtat 247
|||||| |||||||
Sbjct: 227 aacggagggagtat 240
>RF01058;MIR806;AAAA02007571.1/43599-43359 39946:Oryza sativa Indica
Group
Length = 241
Score = 266 bits (134), Expect = 1e-70
Identities = 202/221 (91%), Gaps = 4/221 (1%)
Strand = Plus / Minus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 229 tttcaaaatgtttgacaccgttgactttttaacatatgtttgatcgttcgtcttattcaa 170
Query: 81 acaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatc 138
| |||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||
Sbjct: 169 aacaatttgtgaaatatgtaaaactatatgtgtacatgagagtatatttaacaataaatc 110
Query: 139 aaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaac 197
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 109 aaatgatatgaaaagaataaataattacttaaattttttaaataagatgaatggttaaac 50
Query: 198 acgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
||||| ||||||||| | |||| ||||| ||||||||||||
Sbjct: 49 acgta-ttaaaaagttatcggtatcaaatattttgaaacgg 10
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 204 ttaaaaagtcaacggtgtcaaacattttgaaa 235
||||||||||||||||||||||||||||||||
Sbjct: 198 ttaaaaagtcaacggtgtcaaacattttgaaa 229
>RF01058;MIR806;AAAA02025675.1/1048-809 39946:Oryza sativa Indica
Group
Length = 240
Score = 266 bits (134), Expect = 1e-70
Identities = 218/241 (90%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 240 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacatt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||| | ||||||||||| ||||||| | ||||| |||||||||||| ||||||
Sbjct: 180 cgtcttatg-acacaaatttgtggaatatgttacactatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattt-tttaataagac 185
|||| ||||||| ||||||| || |||||||||||||||||||||||| || ||||||||
Sbjct: 121 taaccatgaatctaatgatacgataagaataaataattacttaaatttcttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 gaatgttcaaacacgtac-taaaaagtcaacggtgtcaaacattttgaaacggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 1 gtactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacatt 60
Query: 69 cgtcttattcaa 80
||||||||||||
Sbjct: 61 cgtcttattcaa 72
Score = 103 bits (52), Expect = 1e-21
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 179 ataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 173 ataagacgaatgttcaaacacgtact-aaaaagtcaacggtgtcaaacattttgaaacgg 231
Query: 239 atggagta 246
| ||||||
Sbjct: 232 agggagta 239
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 262 bits (132), Expect = 2e-69
Identities = 196/214 (91%), Gaps = 5/214 (2%)
Strand = Plus / Minus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
|||| |||| ||||| | ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 229 tttcgaaatatttgataacgttgactttttagcacatgtttaaccgttcgtcttattaaa 170
Query: 81 acaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatgaatc 138
| | |||||||||||||||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 169 a--agtttgtgaaatatgtaaaactatatgcgtacatgaaagtatatttaacaatgaatc 112
Query: 139 aaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaac 197
|||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 111 aaattgtataaaaagaataaataattacttaaattttttgaataagacgaatgttcaaac 52
Query: 198 acgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||||||||||
Sbjct: 51 acgtacttaaaaagtcaacggtgtcaaacatttt 18
Score = 61.9 bits (31), Expect = 4e-09
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaa-tgtttgacatcgttgacttttt-agcacatgtttgaccg 66
|||||||||| |||||||| ||||||||| |||||||||||| || || ||||||| |
Sbjct: 1 gtactccctctatttcaaaaatgtttgacaccgttgactttttaagtacgtgtttgaaca 60
Query: 67 ttcgtcttattcaaa 81
|||||||||||||||
Sbjct: 61 ttcgtcttattcaaa 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||||||||||||||| ||| ||||| || | ||||||||||||| | ||||| |||| |
Sbjct: 168 tttttaataagacgaacggttaaacatgtgc-taaaaagtcaacgttatcaaatatttcg 226
Query: 233 aaa 235
|||
Sbjct: 227 aaa 229
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 262 bits (132), Expect = 2e-69
Identities = 209/231 (90%), Gaps = 4/231 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |
Sbjct: 238 ctccctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccgttcat 179
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatatttaa 129
|||||| ||| | ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 178 cttatttaaaaatttttgtgaaatatgtaaaactatttgtgtacatgaaagtatatttaa 119
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaa 188
|||| ||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 118 caataaatcaaatgatgtgaaaagaataaataattactttaattttttgaataaaacgaa 59
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| | |||||||||| |||||||||||| || ||||||||||| |||||||
Sbjct: 58 tgattaaacacgtac-taaaaagtcaactgtatcaaacattttaaaacgga 9
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| ||||||| ||| ||||||| | || || |||||||||||||||||||| ||
Sbjct: 164 aaatttttaaataagatgaacggtcaaatatgtgct-aaaaagtcaacggtgtcaaatat 222
Query: 229 tttgaaacggatggag 244
||||||||||| ||||
Sbjct: 223 tttgaaacggagggag 238
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||| ||||||||||| | ||||||||||||| || ||||| | | |||
Sbjct: 2 tactctctccgttttaaaatgtttgatacagttgactttttagtacgtgtttaatcattc 61
Query: 70 gtcttattcaaa 81
|| |||||||||
Sbjct: 62 gttttattcaaa 73
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 262 bits (132), Expect = 2e-69
Identities = 207/226 (91%), Gaps = 7/226 (3%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 230 tccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccattcatcttat 171
Query: 77 tcaaacaaatttgtgaaatatgtaaaact--atgtgtacatgaaaatatatttaacaatg 134
| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 170 t--aaaaaatttgtgaaatatgtaaaactacatgtgtacatgaaagtatatttaacaatg 113
Query: 135 aatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacgaatggtc 193
|||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 112 aatcaaat-atatgaaaagaataaataattacttaaatttttttaataaaataaatggtt 54
Query: 194 aaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||| || ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 53 aaatacatac-taaaatgtcaacggtgtcaaacattttgaaacgga 9
Score = 103 bits (52), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||||||||||| ||||||||||||| || || |||||||||||||||||||||||
Sbjct: 161 aaattttttaataagatgaatggtcaaacatgtgct-aaaaagtcaacggtgtcaaacat 219
Query: 229 tttgaaacggat 240
||||||||||||
Sbjct: 220 tttgaaacggat 231
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttag 52
|||||| |||||||||||||||||||||| ||||||| ||||||
Sbjct: 1 gtactcactccgtttcaaaatgtttgacaccgttgacattttag 44
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 260 bits (131), Expect = 9e-69
Identities = 214/238 (89%), Gaps = 4/238 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||| ||||||||| | ||| ||| |||||| ||||||||| |||||||||||||||||
Sbjct: 237 tcccttcgtttcaaa-tatttaacaccgttgattttttagcatatgtttgaccgttcgtc 179
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaac 130
||| | ||| || |||||||||||||||||||||| ||||| |||||| |||||||||
Sbjct: 178 ttaataaaaaaagtttgtgaaatatgtaaaactatatgtgtatatgaaagtatatttaat 119
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 118 aataaatcaaatgatatgaaaagaataaataattacttaaattttttgaataaaacgaat 59
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||| ||||||||||| | |||||||||||||||||| ||||||| |||||||
Sbjct: 58 ggtcaaacatgtacttaaaaaattaacggtgtcaaacattttaaaacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
|||||||||||||| ||||||||||||| |||| | ||||| || |||||||||||| ||
Sbjct: 2 tactccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccatt 61
Query: 69 cgtcttattcaaa 81
||| |||||||||
Sbjct: 62 cgttttattcaaa 74
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 260 bits (131), Expect = 9e-69
Identities = 212/237 (89%), Gaps = 14/237 (5%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||
Sbjct: 243 tactccatccgtttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttc 184
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| || |||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 183 gtcttattaaaa-aattttgtgaaatatgtaaaactatatgtgtgcatgaaagtatattt 125
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 124 aaaaatgaatcaaatgatatgaaaagaataaataatgacttaaattttttgaataagacg 65
Query: 187 aatggtcaaacacgtact----------taaaaagtcaacggtgtcaaacattttga 233
|||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 64 aatggtcaaacacgcactaaaaacgcactaaaaagtcaacggtgtcaaacattttga 8
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||||||||||||||| ||||||| | || || ||||||| |||||||||||||||
Sbjct: 167 aaattttttaataagacgaacggtcaaatatgtgct-aaaaagttaacggtgtcaaacat 225
Query: 229 tttgaaacggatggagtat 247
|||||||||||||||||||
Sbjct: 226 tttgaaacggatggagtat 244
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 23 tcaaaatgtttgacatcgttgactttttag 52
||||||||||||||| ||||||||||||||
Sbjct: 8 tcaaaatgtttgacaccgttgactttttag 37
>RF01058;MIR806;AAAA02033841.1/62825-63065 39946:Oryza sativa Indica
Group
Length = 241
Score = 260 bits (131), Expect = 9e-69
Identities = 213/234 (91%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||||||||||||||||||||| ||||||||||||| | || ||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||||||||| | |||||| || |||||| |||||| |||||||||||| ||||||
Sbjct: 180 cgtcttatt-atttaaatttatgttatatgtttaactatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 taacaatgagtcaaatgatatgaaaagaataaataattacttaaattttttaaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||| ||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 61 gaacggtcaaacacgtacttaaaaagtcaacgg-gtcaaacattttaaaacgga 9
Score = 123 bits (62), Expect = 1e-27
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 177 taataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 taataagacgaacggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 230
Query: 237 ggatggagta 246
||| ||||||
Sbjct: 231 ggagggagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgttcgtctta 75
||||||| |||||||||||| ||||||||||||| | || |||||||||||||||||||
Sbjct: 9 tccgttttaaaatgtttgacc-cgttgactttttaagtacgtgtttgaccgttcgtctta 67
Query: 76 tt 77
||
Sbjct: 68 tt 69
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 260 bits (131), Expect = 9e-69
Identities = 217/241 (90%), Gaps = 6/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||||
Sbjct: 238 tactacctccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||| ||| ||| || ||||||||||||||||||||| ||||| || ||| |||| ||
Sbjct: 178 gtctcattaaaaaaa--ttgtgaaatatgtaaaactatatgtgtatataaaagtataatt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 120 aacaatgaataaaatgatatgaaaagaataaataattacttaaattttttaaataagaca 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 60 aatggtcaaacatata-ttaaaaagtcaacgatgtcaaacattttgaaacggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacatcgttgactttttaatatatgtttgaccattt 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||| ||||||| ||| ||||| || || |||||||||||||||| ||| |||||
Sbjct: 165 ttttttaatgagacgaacggttaaacatgtgct-aaaaagtcaacggtgttaaatatttt 223
Query: 232 gaaacgga 239
||||||||
Sbjct: 224 gaaacgga 231
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 258 bits (130), Expect = 3e-68
Identities = 217/241 (90%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 239 tactccctccgttttaaaatgtttgacaccattaactttttagcacatgtttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||| ||| |||||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 179 gtcttatt-aaaaaaatttatgaaatatgtaaaactatatgtgtacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaagtcatcaataattagttaaattttttaaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||| || ||| |||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 60 aatggtcaaacccgcgctt-aaaagttaacggcgtcaaacatttagaaacggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||
Sbjct: 166 ttttttaataagacgaacggtcaaacatgtgct-aaaaagttaatggtgtcaaacatttt 224
Query: 232 gaaacggatggagta 246
||||||| ||||||
Sbjct: 225 aaaacggagggagta 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| ||||||||||| |||| |||||| ||| | |||||||| |||
Sbjct: 2 tactccctccgtttctaaatgtttgacgccgttaacttttaagcgcgggtttgaccattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AACV01005742.1/10101-9864 39947:Oryza sativa
Japonica Group
Length = 238
Score = 258 bits (130), Expect = 3e-68
Identities = 209/232 (90%), Gaps = 5/232 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 237 tactccctccgtttcaaaatatttgacaccgttggctttttagcacatgtttaaccgttc 178
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgt--gtacatgaaaatatattt 127
|||||||| ||| || || |||||||||||||||||| | ||||||||||||||||||
Sbjct: 177 gtcttattaaaaaaa--ttatgaaatatgtaaaactatatctgtacatgaaaatatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||| |||||||| ||||||||||||||||||| ||||| | ||||||||||||| ||
Sbjct: 119 aacaataaatcaaataatatgaaaagaataaataactacttgatttttttaataagatga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||||||||||| | |||||| |||||| |||||||||||||||||||
Sbjct: 59 atagtcaaacacgtac-tgaaaagttaacggtatcaaacattttgaaacgga 9
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| || || |||||| ||||||||||||| |||||
Sbjct: 164 ttttttaataagacgaacggttaaacatgtgct-aaaaagccaacggtgtcaaatatttt 222
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 223 gaaacggagggagtat 238
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
|||||||||||||||||||||| | |||| |||||| || || |||||||| ||| |||
Sbjct: 6 ccctccgtttcaaaatgtttgataccgttaacttttcagtacgtgtttgactattcatct 65
Query: 74 tatt 77
||||
Sbjct: 66 tatt 69
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 258 bits (130), Expect = 3e-68
Identities = 216/240 (90%), Gaps = 6/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||| ||||||||||||| |||| |||||||| ||||||||| |||||||
Sbjct: 238 tactccctccattttaaaatgtttgacaccgttaactttttaacacatgtttaaccgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|| ||||| ||| | |||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 178 gttttattaaaa--agtttgtgaaatatgtaaaactatatgtgtacattaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| |||||||| |||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 120 aacaataaatcaaat-atataaaaataataaataattacttaaattttttgaataagacg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||| || ||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 61 aatggtcaaatacatacttaaaaagtcaacggtgtcaaatattttaaaacggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||||||| ||||| ||||||| ||||||||||||| | | | ||||||| ||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccatt 61
Query: 69 cgtcttattcaaa 81
|||||||||||||
Sbjct: 62 cgtcttattcaaa 74
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||||||||| ||||| ||| ||||| || ||||||||| ||||||||||||||||||
Sbjct: 166 tttttaataaaacgaacggttaaacatgtg-ttaaaaagttaacggtgtcaaacatttta 224
Query: 233 aaacggatggagtat 247
||| ||| |||||||
Sbjct: 225 aaatggagggagtat 239
>RF01058;MIR806;AP008217.1/20608272-20608042 39947:Oryza sativa
Japonica Group
Length = 231
Score = 258 bits (130), Expect = 3e-68
Identities = 199/217 (91%), Gaps = 5/217 (2%)
Strand = Plus / Minus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
||||||||||||| |||||| |||||| ||||||||||||| ||||||||||| ||| ||
Sbjct: 215 aaaatgtttgacaccgttgaatttttaacacatgtttgaccattcgtcttattaaaaaaa 156
Query: 85 atttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatgaatcaaat 142
||| | |||||||||||| ||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 155 atta-taaaatatgtaaaattatatgtatacatgaaagtatatttaacaatgaatcaaat 97
Query: 143 gatatgaaaagaataaataattacttaaatt-ttttaataagacgaatggtcaaacacgt 201
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 96 gatatgaaaagaataaataattacttaaatttttttaataagacgaatggtcaaacacgt 37
Query: 202 acttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|| ||||||||||||||||||||| ||||| ||||||
Sbjct: 36 ac-taaaaagtcaacggtgtcaaatattttaaaacgg 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 157 ttttttaataagacgaatggtcaaacatgt-gttaaaaattcaacggtgtcaaacatttt 215
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||| ||||| ||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 1 ccgttttaaaatatttgacaccgttgactttttagtacgtgtttgaccattcgtcttatt 60
>RF01058;MIR806;AAAA02000035.1/1574-1333 39946:Oryza sativa Indica
Group
Length = 242
Score = 258 bits (130), Expect = 3e-68
Identities = 198/217 (91%), Gaps = 4/217 (1%)
Strand = Plus / Minus
Query: 34 gacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaa 93
|||| |||||||| ||||||||||||||||||||||||||||| | | ||| | |||||
Sbjct: 216 gacaccgttgactatttagcacatgtttgaccgttcgtcttatcgagagaaaatcgtgaa 157
Query: 94 atatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaa 151
||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 156 ataggtaaaactatatgtgtacgtgaaagtatatttaacaatgaatcaaatgatatgaaa 97
Query: 152 agaataaataattacttaaatttt-ttaataagacgaatggtcaaacacgtacttaaaaa 210
|||||||||||||||||||||||| | |||||||||||||||||||||||||| || |||
Sbjct: 96 agaataaataattacttaaattttctgaataagacgaatggtcaaacacgtac-tataaa 38
Query: 211 gtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||| ||||||||||||| |||||||
Sbjct: 37 gtcaacggtgtcaaatattttgaaacggagggagtat 1
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| |||||||||| ||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttatagtacgtgtttgaccattc 61
Query: 70 gtcttattca 79
||||||||||
Sbjct: 62 gtcttattca 71
>RF01058;MIR806;AAAA02007727.1/39772-40015 39946:Oryza sativa Indica
Group
Length = 244
Score = 258 bits (130), Expect = 3e-68
Identities = 201/221 (90%), Gaps = 4/221 (1%)
Strand = Plus / Minus
Query: 19 cgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattc 78
||||| ||||||||||||| | |||| ||||||||| |||||||||||||| |||||||
Sbjct: 234 cgttttaaaatgtttgacaccattgaatttttagcatatgtttgaccgttcatcttattt 175
Query: 79 aaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaa 136
||| ||||||||||||||||||||||||| ||||| || ||| |||||||||||| |||
Sbjct: 174 aaaaaaatttgtgaaatatgtaaaactataggtgtatataaaagtatatttaacaaagaa 115
Query: 137 tcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaa 195
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||
Sbjct: 114 tcaaatgatatgaaaagaataaataattacttaaattttttgaataaaacgaatggttaa 55
Query: 196 acacgtactt-aaaaagtcaacggtgtcaaacattttgaaa 235
||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 54 acacgtaattaaaaaaatcaacggtgtcaaacattttgaaa 14
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgacttttt 50
||||||||||||||||| |||||| |||||
Sbjct: 14 tttcaaaatgtttgacaccgttgatttttt 43
Score = 44.1 bits (22), Expect = 0.001
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||| ||| ||||||||| | || ||||| |||| |||||||||||||||
Sbjct: 170 tttttaaataagatgaacggtcaaacatatgct-aaaaattcaatggtgtcaaacatttt 228
Query: 232 gaaacg 237
|||||
Sbjct: 229 aaaacg 234
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa Indica
Group
Length = 238
Score = 256 bits (129), Expect = 1e-67
Identities = 208/230 (90%), Gaps = 7/230 (3%)
Strand = Plus / Minus
Query: 20 gtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattca 79
|||| ||||||||| ||| |||| |||||||| ||||||||||||| ||||||||||| |
Sbjct: 227 gttttaaaatgtttcacaccgttcactttttaacacatgtttgaccattcgtcttattaa 168
Query: 80 aacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaat 137
|| || |||||||||| ||||||||| |||||||||||| |||||||||||||||||
Sbjct: 167 aaaaa---tgtgaaatatataaaactatatgtgtacatgaaagtatatttaacaatgaat 111
Query: 138 caaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaa 196
|||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 110 caaatgatataaaaggaataaataattacttaaattttttgaataaaacgaatggtcaaa 51
Query: 197 cacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||| ||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 50 cacgtac-taaaaagtcaacgatgtcaaacattttgaaactgatggagta 2
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||| || ||||||||||||||||||||||||||||||||| || ||||||||| ||
Sbjct: 1 gtactccatcagtttcaaaatgtttgacatcgttgactttttagtacgtgtttgaccatt 60
Query: 69 cgtcttattcaaa 81
||| |||||||||
Sbjct: 61 cgttttattcaaa 73
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||
Sbjct: 164 ttttttaataagacgaatggtcaaacatgt-gttaaaaagtgaacggtgtgaaacatttt 222
Query: 232 gaaacggatggagt 245
|||| ||| ||||
Sbjct: 223 aaaactgatagagt 236
>RF01058;MIR806;AAAA02011276.1/49843-50075 39946:Oryza sativa Indica
Group
Length = 233
Score = 256 bits (129), Expect = 1e-67
Identities = 195/212 (91%), Gaps = 5/212 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 232 tactccctccgttttaaaatgtttgactacgttgactttttagcacgtgtttgactgttc 173
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| |||||||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 172 gtcttattaaaa-aaatttgtgaaatatgtaaacctatatgtgtacatgaaagtatattt 114
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 113 aacaattaatcaaatgatatgaaaagaataaataattacttaatttttttgaataagaca 54
Query: 187 aatggtcaaacacgtacttaaaaagtcaacgg 218
||||||||||||||| | ||||||||||||||
Sbjct: 53 aatggtcaaacacgtgc-taaaaagtcaacgg 23
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 159 ttttttaataagacgaacagtcaaacacgtgct-aaaaagtcaacgtagtcaaacatttt 217
Query: 232 gaaacggatggagtat 247
||||||| |||||||
Sbjct: 218 aaaacggagggagtat 233
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 39 cgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatt 87
||||||||||||||||| ||||||||| || |||||||||||| |||||
Sbjct: 24 cgttgactttttagcacgtgtttgaccatttgtcttattcaaaaaaatt 72
>RF01058;MIR806;AP008215.1/601195-601435 39947:Oryza sativa Japonica
Group
Length = 241
Score = 256 bits (129), Expect = 1e-67
Identities = 212/235 (90%), Gaps = 6/235 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 240 tactcgctccatttcaaaatgtttgacaccgttaactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||| ||| ||| || ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 180 gtcttattaaaaaaaagttatgaaatatgtaaaactatatgtgtacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| ||| ||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct: 120 aacaataaattaaatgatatgaaa--aaaaaataattacttaaattttttaaataagacg 63
Query: 187 aatggtcaaacacgtac-ttaaaaagtcaacggtgtcaaacattttgaaacggat 240
||| ||||||||||||| |||||||| ||||| |||||||||||| ||||||||
Sbjct: 62 aatagtcaaacacgtactttaaaaagctaacggcgtcaaacattttaaaacggat 8
Score = 79.8 bits (40), Expect = 2e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| || || ||||||| ||||||||||||||||||
Sbjct: 167 ttttttaataagacgaacggtcaaacatgtgct-aaaaagttaacggtgtcaaacatttt 225
Query: 232 gaaa 235
||||
Sbjct: 226 gaaa 229
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 256 bits (129), Expect = 1e-67
Identities = 194/212 (91%), Gaps = 4/212 (1%)
Strand = Plus / Minus
Query: 39 cgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatg 98
|||| |||||||| |||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 211 cgttaactttttaacacatgtttgaccgtttgtcttattcaaaaaattttgtgaaatata 152
Query: 99 taaaactat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaat 156
||||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 151 taaaactatatgtgtgcatgaaagtatatttaataataaatcaaatgatatgaaaagaat 92
Query: 157 aaataattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaagtcaa 215
||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 91 aaataattacttaaattttttgaataagacgaatgatcaaacatgta-ttaaaaagtcaa 33
Query: 216 cggtgtcaaacattttgaaacggatggagtat 247
|||||||||| ||||||||||||| |||||||
Sbjct: 32 cggtgtcaaatattttgaaacggagggagtat 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| ||||||||||||| |||||||||| | |||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttaatacatgtttgatcattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 256 bits (129), Expect = 1e-67
Identities = 207/229 (90%), Gaps = 8/229 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||||||||||||||||| ||||||||||||| |||||| | |||||
Sbjct: 242 tactccctctatttcaaaatgtttgacaccgttgactttttaacacatgat----cgttc 187
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||| |||| ||| ||| |||||||
Sbjct: 186 gtcttattaaaa-aaatttgtgaaatatgtaaaactatatgtatacatcaaagtatattt 128
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 127 aacaataaatcaaatgatataaaaagaataaataattacttaaattttttgaataagacg 68
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 67 aatggtcaaatatgtacttaaaaaatcaacggtgtcaaacattttgaaa 19
Score = 67.9 bits (34), Expect = 7e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgtcttattca 79
||||||||||||||||| |||||| ||||| || |||| ||||||| |||||||||||||
Sbjct: 19 tttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtcttattca 78
Query: 80 aa 81
||
Sbjct: 79 aa 80
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 204 ttaaaaagtcaacggtgtcaaacattttgaaa 235
||||||||||||||||||||||||||||||||
Sbjct: 200 ttaaaaagtcaacggtgtcaaacattttgaaa 231
>RF01062;MIR812;AACV01006600.1/44361-44190 39947:Oryza sativa
Japonica Group
Length = 172
Score = 254 bits (128), Expect = 5e-67
Identities = 160/168 (95%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaa-tttgtgaaatatgtaaa 102
|||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 2 actttttagcacatgtttgaccgttcgtcttatttaaaaaaagtttgtgaaatatgtaaa 61
Query: 103 actatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataa 162
|||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 62 actatgtgtacacgaaagtatatttaacaatgaatcaaatgatataaaaagaataaataa 121
Query: 163 ttacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaa 209
||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 122 ttacttaaattttttaaataagacgaatggtcaaacacgtactaaaaa 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||| || ||||||||| |||||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttatt 138
>RF01058;MIR806;AAAA02006649.1/21379-21617 39946:Oryza sativa Indica
Group
Length = 239
Score = 254 bits (128), Expect = 5e-67
Identities = 217/242 (89%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 239 gtactccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 180
Query: 69 cgtcttat--tcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatt 126
||||||| ||||| ||||| || |||||||||||||||||||||||| ||| ||||||
Sbjct: 179 tgtcttatattcaaaaaaatt-gtaaaatatgtaaaactatgtgtacataaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||||||| ||| ||||||||||||||||| ||||||||| || | |||||| ||||| ||
Sbjct: 120 taacaataaattaaatgatatgaaaagaacaaataattatttgatttttttaaataaaac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||||||| |||||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 60 gaatggtcaaacacgta--taaaaagttaacggtgtcaaacattttaaaatggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 197 taaaaagtcaacggtgtcaaacattttgaaatggagggagta 238
Score = 58.0 bits (29), Expect = 6e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||| ||||||||||||| |||| |||||||| || ||||||||| |||
Sbjct: 2 tactccctccattttaaaatgtttgacaccgttaacttttta-tacgtgtttgaccattc 60
Query: 70 gtcttattcaaacaaat 86
|| ||||| ||| ||||
Sbjct: 61 gttttatttaaaaaaat 77
>RF01058;MIR806;AC134230.2/30599-30357 39947:Oryza sativa Japonica
Group
Length = 243
Score = 254 bits (128), Expect = 5e-67
Identities = 219/248 (88%), Gaps = 16/248 (6%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 242 tactctctccgtttcaaaatgtttgataccgttgactttttagcacatgt-----cgttc 188
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 187 gtcttattaaaa-aaatttgtgaaatatgtaaaactatatgtgtacatgaaaacatattt 129
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 128 aacaatgaaacaaatgatatgaaaaaaataaataattacttaaaatttttaataagacga 69
Query: 188 atggtcaaacacgtacttaaaaagtc--------aacggtgtcaaacattttgaaacgga 239
||||| |||||| |||||||||| || |||||||| |||||||||||||||||
Sbjct: 68 atggttaaacacatacttaaaaaatcaaaaaattaacggtgttaaacattttgaaacgga 9
Query: 240 tggagtat 247
|||||||
Sbjct: 8 gggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||||||||||| |||||||||||||||||||
Sbjct: 201 taaaaagtcaacggtatcaaacattttgaaacgga 235
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgtt 42
|||||||||||||||||||||||| ||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttaacaccgtt 34
>RF01058;MIR806;AP008211.1/2299532-2299770 39947:Oryza sativa
Japonica Group
Length = 239
Score = 254 bits (128), Expect = 5e-67
Identities = 204/227 (89%), Gaps = 8/227 (3%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||
Sbjct: 235 tccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttgatcattcgtc 176
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaac 130
||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 175 ttattcaaaataatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaac 116
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatg 190
|||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||
Sbjct: 115 aatgaatcaaatgatatgaaaagaataaataatt-----attttttgaataaaacgaatg 61
Query: 191 gtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
|||||| || ||| | ||||||||||||||| ||| |||||||||||
Sbjct: 60 gtcaaatacatac-tgaaaagtcaacggtgtaaaatattttgaaacg 15
Score = 77.8 bits (39), Expect = 7e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| ||||||||||||| ||||||| || || |||||||||||||||||||||||||||
Sbjct: 166 ttttgaataagacgaatgatcaaacatgtgct-aaaaagtcaacggtgtcaaacattttg 224
Query: 233 aaa 235
|||
Sbjct: 225 aaa 227
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||||| ||||||||||| ||| ||| ||||||||||| || | | ||||||| |||||
Sbjct: 8 ctcccttcgtttcaaaatattttacaccgttgacttttcagtatgtatttgaccattcgt 67
Query: 72 cttattcaaa 81
|||||||||
Sbjct: 68 tttattcaaa 77
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 254 bits (128), Expect = 5e-67
Identities = 211/235 (89%), Gaps = 4/235 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccattcgtctta 175
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactatgt--gtacatgaaaatatatttaacaat 133
|||||| |||||||||||||||||| ||| | || ||| |||||||||||||||||
Sbjct: 174 ttcaaaattttttgtgaaatatgtaaaattatatatgtgcataaaaatatatttaacaat 115
Query: 134 gaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacgaatggt 192
|||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 114 gaatcaaatgatatgaaaagaataaataattacttaaactttttaaataagacaaatggt 55
Query: 193 caaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||| ||| ||||| |||||||||| ||||| |||||||||||| |||||||
Sbjct: 54 caaacatgta-ttaaacagtcaacggtttcaaatattttgaaacggggggagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| ||||||||||||||||||| | || || |||||||||||||||||||| ||||||
Sbjct: 168 ttttgaataagacgaatggtcaaatatgtgct-aaaaagtcaacggtgtcaaatattttg 226
Query: 233 aaacgga 239
|||||||
Sbjct: 227 aaacgga 233
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||| |||||||||||| ||||| | |||||||| |||| |||||||||||| ||
Sbjct: 2 tactccccccgtttcaaaatatttgaaaccgttgactgtttaatacatgtttgaccattt 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AAAA02023902.1/640-883 39946:Oryza sativa Indica
Group
Length = 244
Score = 254 bits (128), Expect = 5e-67
Identities = 211/233 (90%), Gaps = 8/233 (3%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 244 gtacttcctccgtttcaaaatgtttgacaccgttgactttttagcatatgtttgattgtt 185
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatat- 125
||||||||| ||| ||||||||||||||||| ||||||| |||||||||||| |||||
Sbjct: 184 cgtcttattaaaa-aaatttgtgaaatatgtcaaactatatgtgtacatgaaagtatata 126
Query: 126 --ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataa 182
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 125 atttaacaatgaatcaaatgatacgaaaagaataaataattacttaaatttttttaataa 66
Query: 183 gacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
||| ||||||||||||||| || ||||| |||||| | |||||||||||||||
Sbjct: 65 gacaaatggtcaaacacgtgctcaaaaa-tcaacgatttcaaacattttgaaa 14
Score = 73.8 bits (37), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgttt-caaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||||||||| |||||||||||| |||||||| |||| ||||| ||||||||| ||
Sbjct: 2 tactccctccgttttcaaaatgtttgaaatcgttgatttttgagcacgtgtttgaccatt 61
Query: 69 cgtcttatt 77
||||||||
Sbjct: 62 tgtcttatt 70
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||| | | |||||||||||||||||||||||||||
Sbjct: 170 ttttttaataagacgaacaatcaaacatatgc-taaaaagtcaacggtgtcaaacatttt 228
Query: 232 gaaacgga 239
||||||||
Sbjct: 229 gaaacgga 236
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 252 bits (127), Expect = 2e-66
Identities = 164/174 (94%), Gaps = 3/174 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttattcaaaaaattttatgaaatatgtaaa 60
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 actatatgtgtacgtgaaagtatatttaataatgaatcaaatgatatgaaaagaataaat 120
Query: 161 aattactt-aaattttttaataagacgaatggtcaaacacgtacttaaaaagtc 213
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattacttaaaatttttgaataagacgaatggtcaaacacgtacttaaaaagtc 174
>RF01058;MIR806;AAAA02036553.1/4131-3892 39946:Oryza sativa Indica
Group
Length = 240
Score = 252 bits (127), Expect = 2e-66
Identities = 214/238 (89%), Gaps = 5/238 (2%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||||||||||| ||||||| | ||||||||||||||||||| |||||| |||||||
Sbjct: 236 tccctccgtttcaaa-tgtttgataccgttgactttttagcacatctttgactgttcgtc 178
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatatttaac 130
||||||||| || || |||||||||||||||||| |||||| |||||| ||||||||||
Sbjct: 177 ttattcaaaaaagttggtgaaatatgtaaaactacatgtgtatatgaaagtatatttaac 118
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||
Sbjct: 117 aataaatcaaatgatatgaaaagaataaataattatttaaattttttgaataagataaat 58
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||||||| ||||||| |||| ||||||| |||||||||| || |||||||
Sbjct: 57 ggtcaaacacgtac-caaaaagttaacgatgtcaaatattttgaaacagagggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||||||||| |||||||||||| ||||||| | || ||||||||| ||
Sbjct: 2 tactccctctgtttcaaaatatttgacatcgttaactttttggtacgtgtttgaccattt 61
Query: 70 gtcttattcaaa 81
|||||||||||
Sbjct: 62 atcttattcaaa 73
Score = 48.1 bits (24), Expect = 6e-05
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||| | || || |||||||||||||| ||||||| |||
Sbjct: 167 tttttgaataagacgaacagtcaaagatgtgct-aaaaagtcaacggtatcaaaca-ttt 224
Query: 232 gaaacgga 239
||||||||
Sbjct: 225 gaaacgga 232
>RF01058;MIR806;AAAA02018369.1/11191-11429 39946:Oryza sativa Indica
Group
Length = 239
Score = 252 bits (127), Expect = 2e-66
Identities = 218/241 (90%), Gaps = 8/241 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 238 tactcccttcgtttcaaaatgtttgacaccattga-tttttagcacatgtttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||||||| ||| ||||||||||| ||||| ||||||| |||| ||||||| |||||||
Sbjct: 179 gtcttataaaaa-aaatttgtgaa-tatgtgaaactatatgtgtgcatgaaagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagac 185
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 121 aacaatgattcaaatgatatgaaaagaataaataattccttaaatttttttgaataagat 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||| |||||||||| ||||||||||||||| | ||||||||||||||||| |||||
Sbjct: 61 gaatggtaaaacacgtac-taaaaagtcaacggtttgaaacattttgaaacggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||||||| | | |||||||||||||| || ||||| ||| ||
Sbjct: 1 gtactccctccgtttcaaaatgtttcaaaccgttgactttttagtacgtgttttaccatt 60
Query: 69 cgtcttattcaaacaaattt 88
| ||||||||||| ||||||
Sbjct: 61 catcttattcaaaaaaattt 80
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||| |||||||||| ||||||||| || || |||| |||| |||||||||||||||
Sbjct: 166 tttttttataagacgaacggtcaaacatgtgctaaaaa--tcaatggtgtcaaacatttt 223
Query: 232 gaaacggatggagtat 247
|||||| | |||||||
Sbjct: 224 gaaacgaagggagtat 239
>RF01058;MIR806;AACV01010775.1/2057-2297 39947:Oryza sativa Japonica
Group
Length = 241
Score = 252 bits (127), Expect = 2e-66
Identities = 207/230 (90%), Gaps = 4/230 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||| ||||| | |||| ||||||||||| |||||| || ||||
Sbjct: 240 tactccctccgttttaaaatatttgataccgttaactttttagcatatgtttaactgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||| |||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 180 gtcgtattaaaa-aaatttgtgaaatatgtaaaactatatgtgtacataaaaatatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataagacg 186
|||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||
Sbjct: 121 aacaatgaatcaaatgatataaaaagaataaataattaattaaaatttttaaataagaca 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
|||| ||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 61 aatgatcaaatacgtatttaaaaagtcaacggtgtaaaacattttgaaac 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgacttttta 51
||||| |||||||||||||| ||| |||||||||||||
Sbjct: 6 ccctctgtttcaaaatgttttacaccgttgacttttta 43
>RF01058;MIR806;AP008212.1/21880161-21879923 39947:Oryza sativa
Japonica Group
Length = 239
Score = 250 bits (126), Expect = 8e-66
Identities = 203/225 (90%), Gaps = 4/225 (1%)
Strand = Plus / Minus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 223 aaaatgtttgacaccgttgactctttagcacatatttgaccgttcgtcttattcaaa-aa 165
Query: 85 atttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatcaaat 142
||||||||||||| || |||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 164 atttgtgaaatatatacaactatacgtgtacatgaaagtatatttaacaataaatcaaat 105
Query: 143 gatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaaacacgta 202
||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 104 gatataaaaagaataaataattatttaatttttttaataagacgaacggtcaaacacacg 45
Query: 203 cttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
| |||||||| || |||| |||||||||||||||||| |||||||
Sbjct: 44 c-taaaaagttaatggtggcaaacattttgaaacggagggagtat 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||||||||||||| || | || |||||||||| |||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgccaccattaactttttagcgtgtgtttgaccgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||| | || || ||| ||||||||||||||||||||||
Sbjct: 165 tttttgaataagacgaacggtcaaatatgtgct-aaagagtcaacggtgtcaaacatttt 223
Query: 232 gaaacggatggagtat 247
||| |||| ||||||
Sbjct: 224 aaaatggatagagtat 239
>RF01058;MIR806;AACV01016852.1/644-883 39947:Oryza sativa Japonica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 216/241 (89%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||| ||||| ||||||| |||||||||||||||| || ||||||||||
Sbjct: 240 gtactccctccgttttaaaatatttgacaccgttgactttttagcatatatttgaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||||||||||||| ||||| ||||||||||||||| |||| ||| |||||| ||||||
Sbjct: 180 cgtcttattcaaaagaatttatgaaatatgtaaaactatatgcgtatatgaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataagac 185
||||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 120 taacaatgaattaaatgatatgaaaa-aataaataattacttaaaatttttaaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
| |||||||||||| ||| ||||||||||| ||||| ||| |||||||||| || |||||
Sbjct: 61 gtatggtcaaacacatac-taaaaagtcaatggtgttaaatattttgaaaccgagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 198 taaaaagtcaacggtgtcaaatattttaaaacggagggagta 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||||||||| ||| ||| | |||||||||||| | ||||||||| | |
Sbjct: 2 tactccctcggtttcaaaatatttaacaccattgactttttagtatgtgtttgaccatac 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AC145327.2/52567-52806 39947:Oryza sativa Japonica
Group
Length = 240
Score = 250 bits (126), Expect = 8e-66
Identities = 207/229 (90%), Gaps = 5/229 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| || ||||| ||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 239 tactctctacgttttaaaatgtttgacaccgttgactttttagcatatgtttgactgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|| |||| ||| || |||||||||||||||||||||| |||||| | ||| |||||||
Sbjct: 179 gttctattaaaa-aagtttgtgaaatatgtaaaactatatgtgtacgtaaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaaataagact 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||| |||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 60 aatggttaaacacgt-cctaaaaagtcaacggtgtcaaatattttgaaa 13
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||||| ||||||| |||||||||||||| || ||||| ||| || ||||||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttaggacgtgtttaaccattagtcttatt 69
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||||||||||||||||||| |||||
Sbjct: 198 taaaaagtcaacggtgtcaaacattttaaaacg 230
>RF01058;MIR806;ABRL01002061.1/457-692 65489:Oryza barthii
Length = 236
Score = 248 bits (125), Expect = 3e-65
Identities = 216/241 (89%), Gaps = 9/241 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||
Sbjct: 235 tactccctccgtttcaaaatatttgacaccgttaactttttagtacatgtttgaccgttc 176
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaa 129
|||||||| ||| |||||| |||||||||||||||||| ||||| | |||||||||
Sbjct: 175 gtcttattaaaaaaaatttatgaaatatgtaaaactatacgtacaag----tatatttaa 120
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagacga 187
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 119 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttttgaataagacaa 60
Query: 188 atggtcaaacacgtacttaaaaagtc-aacggtgtcaaacattttgaaacggatggagta 246
|||| |||||||| | ||||||||| ||||| ||| |||||||||||||||| ||||||
Sbjct: 59 ctggttaaacacgt-cataaaaagtctaacggcgtc-aacattttgaaacggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||| |||||
Sbjct: 162 ttttttaataagacgaacggtcaaacatgtact-aaaaagttaacggtgtcaaatatttt 220
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 221 gaaacggagggagtat 236
Score = 48.1 bits (24), Expect = 6e-05
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgtt-gactttttagcacatgtttgaccgtt 68
||||||||||||||||||||| ||||| |||| ||||||||| || ||||| ||| |
Sbjct: 2 tactccctccgtttcaaaatg-ttgacgccgttagactttttatgacgtgtttaaccagt 60
Query: 69 cgtcttattcaaacaaattt 88
|||||||||||| ||||||
Sbjct: 61 tgtcttattcaaaaaaattt 80
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 248 bits (125), Expect = 3e-65
Identities = 215/240 (89%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||||||| ||||||||||||| |||| || |||||||||||||||||| |||
Sbjct: 239 tacttcctccgttttaaaatgtttgacaccgttaaccttttagcacatgtttgacaattc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 179 gtcttattaaaa-aaatttgtgaaatatgtaaaactatatgtgtaaatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacg 186
|| ||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||
Sbjct: 120 aataataaatcaaatgatataaaaagaataaataattagttaaatttttttaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| |||| |||||||||||||| || ||| ||||| ||||||| ||||||
Sbjct: 60 aatggtcaaacatgtac-taaaaagtcaacggcgttaaatattttaaaacggagggagta 2
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||| ||||| ||| || |||||||||||||| |||||||||||| ||
Sbjct: 1 gtactccctccgttttaaaatatttaacgccgttgactttttagtacatgtttgaccatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||||||| |||||||| || | ||||| || ||||||||||||||||||
Sbjct: 166 ttttttaataagacgaattgtcaaacatgtgc-taaaaggttaacggtgtcaaacatttt 224
Query: 232 gaaacgga 239
|||||||
Sbjct: 225 aaaacgga 232
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 248 bits (125), Expect = 3e-65
Identities = 207/228 (90%), Gaps = 6/228 (2%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaa-tgtttgacatcgttgactttttagcacatgtttgaccgttcg 70
|||||||||||| |||| | ||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 238 ctccctccgtttaaaaaatatttgacaccgttaactttttagcacatgtttaaccgttcg 179
Query: 71 tcttattcaaacaaatttgtgaaatatgtaaaa--ctatgtgtacatgaaaatatattta 128
|||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 178 tcttattcaataaaatttgtgaaatatgtaaaattatatgtgtacatgaaagtttattta 119
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacga 187
||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||
Sbjct: 118 acaataaatcaaatgatat-aaaaaaataaataattacttaaattttttgaataagacga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||||||| || |||||||||| ||||||||||| |||||||||
Sbjct: 59 atggtcaaacacata-ttaaaaagtccacggtgtcaaatattttgaaa 13
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||| ||||||||| ||||||| ||| ||||||||| | ||||||||| |||||||||
Sbjct: 8 ctccatttcaaaatatttgacaccgtggactttttaatatgtgtttgaccattcgtctta 67
Query: 76 ttcaaa 81
||||||
Sbjct: 68 ttcaaa 73
Score = 44.1 bits (22), Expect = 0.001
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||| ||| ||||| || || ||||||| |||||||||||| |||||
Sbjct: 172 aataagacgaacggttaaacatgtgct-aaaaagttaacggtgtcaaatatttt 224
>RF01062;MIR812;AACV01009588.1/14109-13940 39947:Oryza sativa
Japonica Group
Length = 170
Score = 246 bits (124), Expect = 1e-64
Identities = 162/171 (94%), Gaps = 4/171 (2%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaa 103
|||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||
Sbjct: 1 actttttagcacatgtttgaccattcgtcttattaaaacaa-tttgtgaaatatataaaa 59
Query: 104 ctat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaata 161
|||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ctatatgtgtacgtgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaata 119
Query: 162 attacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaag 211
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 120 attacttaaattttttgaataagacgaatggtcaaacacgtacttaaaaag 170
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 174 ttttaataagacgaatggtcaaaca 198
|||||||||||||||||||||||||
Sbjct: 38 ttttaataagacgaatggtcaaaca 14
>RF01058;MIR806;AP008209.1/3514325-3514566 39947:Oryza sativa
Japonica Group
Length = 242
Score = 246 bits (124), Expect = 1e-64
Identities = 213/238 (89%), Gaps = 6/238 (2%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||||| ||||||| ||||| ||||||| |||||||||||| ||||||||
Sbjct: 237 cctccgtttcaaaatatttgacactgttgattttttagaacatgtttgaccattcgtctt 178
Query: 75 attcaaacaaatttgt--gaaatatgtaaaactat--gtgtacatgaaaatatatttaac 130
||||||| ||| | ||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 177 attcaaatttttttttatgaaatatgtaaaactatatgtgtacatgaaagtatatttaac 118
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
|||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||
Sbjct: 117 aatgaatcaaatgatatgaaaagaataaataattacttaatttttttaaaaaaaacgaat 58
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 57 tgttaaacacgtgc-taaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgttt 61
|||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgttt 53
Score = 67.9 bits (34), Expect = 7e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||||||||||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct: 175 aataagacgaatggtcaaacatgttctaaaaaa-tcaacagtgtcaaatattttgaaacg 233
Query: 238 ga 239
||
Sbjct: 234 ga 235
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 244 bits (123), Expect = 5e-64
Identities = 208/233 (89%), Gaps = 5/233 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||| || |||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 238 gtactcccgccatttctaaatgtttgacaccgttgactttttagcacatgtttgaccgtt 179
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||| ||||||||| ||| |||||||||||||||||| ||||| || |||||| ||||||
Sbjct: 178 cgtgttattcaaaaaaaattgtgaaatatgtaaaactatatgtctatatgaaagtatatt 119
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
|||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| |||
Sbjct: 118 taacaatgaatcaaatgataggaaaagaattaataattactt-atttttttaataaaacg 60
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||||||| | |||||||||||||| | |||||| ||| ||||||||
Sbjct: 59 aatggtcaaaca--tgcttaaaaagtcaacagcgtcaaatttttagaaacgga 9
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| ||||||||| || || |||||||||||||||||||||||||
Sbjct: 164 tttttgaataacacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattta 222
Query: 232 gaaa 235
||||
Sbjct: 223 gaaa 226
>RF01058;MIR806;AP002882.2/89577-89811 39947:Oryza sativa Japonica
Group
Length = 235
Score = 244 bits (123), Expect = 5e-64
Identities = 176/191 (92%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||
Sbjct: 234 tactccctccgttttaaaatgtttgacactgttgactttttagcacgtgtttaaccgttt 175
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaa 129
|||||||| ||| |||| ||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 174 gtcttattaaaaataatt-gtgaaatatgtaaaaatatgtgtacatgaaagtatatttaa 116
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaa 188
|||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 115 caattaataaaatgatatgaaaagaataaataattacttaaattttttgaataagacgaa 56
Query: 189 tggtcaaacac 199
|||||||||||
Sbjct: 55 tggtcaaacac 45
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
||||||||||||| || ||| |||||||| || ||||||||||| ||||||||||||||
Sbjct: 162 tttttaataagacaaacggttaaacacgtgct-aaaaagtcaacagtgtcaaacatttta 220
Query: 233 aaacggatggagtat 247
||||||| |||||||
Sbjct: 221 aaacggagggagtat 235
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 244 bits (123), Expect = 5e-64
Identities = 207/230 (90%), Gaps = 5/230 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
||||||||| |||||||||| ||||||| ||||||||||||| | |||||||||||| ||
Sbjct: 241 tactccctctgtttcaaaatatttgacaccgttgactttttaagtacatgtttgaccatt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||||||| || ||| |||||||||||||||||| ||||| |||||| ||||||
Sbjct: 181 tgtcttattcaaaaaattttatgaaatatgtaaaactatatgtgtagatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 121 taataatgaatcaaatgatatgaaaataataaataattacttaaattttttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
||| ||||||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 61 gaacggtcaaacatgtgc-taaaaagtcaatagtgtcaaacattttgaaa 13
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tccctccatttcaaaatgtttgacactattgactttttagcacatgtttgaccgttcgtc 64
Query: 73 ttattcaaa 81
|||||||||
Sbjct: 65 ttattcaaa 73
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 167 tttttgaataagacaaatggtcaaacatgtacttaaaaagtcaacggtgtcaaatatttt 226
Query: 232 gaaacggatggagta 246
||||| || ||||||
Sbjct: 227 gaaacagagggagta 241
>RF01062;MIR812;AP008207.1/12546112-12545941 39947:Oryza sativa
Japonica Group
Length = 172
Score = 242 bits (122), Expect = 2e-63
Identities = 159/169 (94%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 46 tttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaact 105
|||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 4 tttttagcgcatgtttgaccgttcgtcttattaaaaaaaatttgtgaaatatgtaaaact 63
Query: 106 at--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataat 163
|| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atatgtgtacataaaagtgtatttaacaatgaatcaaatgatatgaaaagaataaataat 123
Query: 164 tacttaaa-ttttttaataagacgaatggtcaaacacgtacttaaaaag 211
||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tacctaaatttttttaataagacgaatggtcaaacacgtacttaaaaag 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaaca 15
>RF01058;MIR806;AAAA02007631.1/1078-840 39946:Oryza sativa Indica
Group
Length = 239
Score = 242 bits (122), Expect = 2e-63
Identities = 214/241 (88%), Gaps = 4/241 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||| |||||| |||||||||||||| ||||||||||||| || || ||||||||||
Sbjct: 239 gtactccttccgtt-caaaatgtttgacaccgttgactttttaacatatatttgaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
| ||||||| ||| ||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 180 catcttattaaaaaaaatta-tgaaatatgtaaaactatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||| |||
Sbjct: 121 taacaatgattcaaatgatataaaaagtataaataattacttaaatttttgaataaaacg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||| |||||| ||||||||||||||| || |||| |||||||||||||| || ||||||
Sbjct: 61 aatagtcaaatacgtacttaaaaagttaatagtgttaaacattttgaaacagagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 204 ttaaaaagtcaacggtgtcaaacattttgaa 234
|||||||||||||||||||||||||||||||
Sbjct: 197 ttaaaaagtcaacggtgtcaaacattttgaa 227
>RF01058;MIR806;AAAA02025783.1/3210-3453 39946:Oryza sativa Indica
Group
Length = 244
Score = 242 bits (122), Expect = 2e-63
Identities = 178/193 (92%), Gaps = 4/193 (2%)
Strand = Plus / Minus
Query: 51 agcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaac--tatg 108
|||||||||||||||||| || ||||| ||| || |||||||||||| |||||| ||||
Sbjct: 201 agcacatgtttgaccgtttgttttatttaaaaaattttgtgaaatatataaaaccatatg 142
Query: 109 tgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataattactt 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataattactt 82
Query: 169 aaatttttt-aataagacgaatggtcaaacacgtactt-aaaaagtcaacggtgtcaaac 226
||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 81 aaattttttgaataagataaatggtcaaacacgtacttaaaaaagttaacggtgtcaaat 22
Query: 227 attttgaaacgga 239
||||| |||||||
Sbjct: 21 attttaaaacgga 9
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgacttttt--agcacatgtttgaccgttcg 70
||||||||||| ||||| ||||||| |||| ||||||| || || ||||||||| ||
Sbjct: 5 tccctccgttttaaaatatttgacaccgttaacttttttaagtacgtgtttgaccattta 64
Query: 71 tcttattcaaa 81
|||||||||||
Sbjct: 65 tcttattcaaa 75
>RF01058;MIR806;AL606588.4/5999-5762 4530:Oryza sativa (rice)
Length = 238
Score = 242 bits (122), Expect = 2e-63
Identities = 210/234 (89%), Gaps = 9/234 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||
Sbjct: 237 tactccctccgtttcaaaatatttgacaccgttgactttttagcatatgtttgaccgttc 178
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| || ||||||||||| ||||||||| |||||||||||| |||||||
Sbjct: 177 gtcttattaaaaaaa--ttgtgaaatatataaaactatatgtgtacatgaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagac 185
||||||||||||||| |||| |||| |||||||||||||||| |||||| ||||||||
Sbjct: 119 aacaatgaatcaaataatataaaaa-aataaataattacttagttttttttaaataagac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 60 aaatggtcaaacacgtacttaaaaaa--agtggtgtcaaacattttgaaacgga 9
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| | || |||||||||||||||||||| |||||
Sbjct: 164 ttttttaataagacgaacggtcaaacatatgct-aaaaagtcaacggtgtcaaatatttt 222
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 223 gaaacggagggagtat 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ctccgtttcaaaatgtttgaca 37
||||||||||||||||||||||
Sbjct: 8 ctccgtttcaaaatgtttgaca 29
>RF01058;MIR806;AP008209.1/32847449-32847678 39947:Oryza sativa
Japonica Group
Length = 230
Score = 242 bits (122), Expect = 2e-63
Identities = 180/197 (91%), Gaps = 3/197 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||||||||||||| ||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 223 ctccgtttcaaaatatttgacaccattgactttttagcacatgtttaaccgttcgtctta 164
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaat 133
|| ||| ||| | |||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 163 tttaaaaaaaata-tgaaatatgtaaaactatatgtgtatatgaaagtatatttaacaat 105
Query: 134 gaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggtc 193
|||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 104 gaattaaatgatatgaaaagaataaataattatttaatttttttaataagacgaatggtc 45
Query: 194 aaacacgtacttaaaaa 210
||||||||||| |||||
Sbjct: 44 aaacacgtactgaaaaa 28
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||| ||||| || || |||||||||| ||||||||| |||||
Sbjct: 156 tttttaaataagacgaacggttaaacatgtgct-aaaaagtcaatggtgtcaaatatttt 214
Query: 232 gaaacgga 239
||||||||
Sbjct: 215 gaaacgga 222
>RF01058;MIR806;AP005804.2/167343-167104 39947:Oryza sativa Japonica
Group
Length = 240
Score = 242 bits (122), Expect = 2e-63
Identities = 215/241 (89%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||| ||||||| | || ||||||||||| |||||| ||||||
Sbjct: 240 gtactccctccatttcaaaatatttgacaccattaactttttagcatatgtttaaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||| ||||| ||| ||| | ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 180 cgttttattaaaaaaaaat-gtgaaatatgtaaaactatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 121 tagcaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaaataaaac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|||||||||||||| || | ||||| ||||||||| |||| ||||| ||||||| |||||
Sbjct: 61 gaatggtcaaacacata-taaaaaaatcaacggtgccaaatattttaaaacggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||| ||||| ||| ||||| | | |||||||| || ||||||||| |||||
Sbjct: 166 ttttttaataaaacgaacggttaaacatatgc-taaaaagttaatggtgtcaaatatttt 224
Query: 232 gaaacggatggagta 246
|||| ||| ||||||
Sbjct: 225 gaaatggagggagta 239
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgacttttt 50
||||||||||||||| ||||| |||| || |||||| |||||
Sbjct: 1 gtactccctccgttttaaaatatttggcaccgttgatttttt 42
>RF01062;MIR812;CR855113.1/22090-22258 4530:Oryza sativa (rice)
Length = 169
Score = 240 bits (121), Expect = 8e-63
Identities = 156/164 (95%), Gaps = 4/164 (2%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcatcttattaaaa-aaatttgtgaaatatgtaaa 59
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 actatatgtgtacatgaag-tatatttaacaatgaatcaaatgatatgaaaagaataaat 118
Query: 161 aattacttaaattttttaataagacgaatggtcaaacacgtact 204
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 119 aattacttaaatttttgaataagacgaatggtcaaacacgtact 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 47 ttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||| || ||||||||| |||||||||||||||
Sbjct: 166 ttttagtacgtgtttgaccattcgtcttattcaaa 132
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 240 bits (121), Expect = 8e-63
Identities = 216/243 (88%), Gaps = 6/243 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| | ||||| ||||||||||||| ||||||||||||| |||||| |||||||
Sbjct: 242 tactccattcgttttaaaatgtttgacactgttgactttttagtgtatgttttaccgttc 183
Query: 70 gtcttattcaaacaaatttg--tgaaatatgtaaaactat--gtgtacatgaaaatatat 125
||||||||||| ||| |||||||||||||||||| ||||| |||||| |||||
Sbjct: 182 atcttattcaaattttttttgttgaaatatgtaaaactatatgtgtatatgaaagtatat 123
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataaga 184
|| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 122 tttactataaatcaaatgatatgaaaagaataaataattacttaaattttttgaataaga 63
Query: 185 cgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 cgaatggtcaaacacgtac-taaaaagtcaacggtgtcaaacattttgaaacggagggag 4
Query: 245 tat 247
|||
Sbjct: 3 tat 1
Score = 111 bits (56), Expect = 5e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 201 taaaaagtcaacagtgtcaaacattttaaaacgaatggagta 242
>RF01058;MIR806;AAAA02003225.1/20808-21050 39946:Oryza sativa Indica
Group
Length = 243
Score = 240 bits (121), Expect = 8e-63
Identities = 204/227 (89%), Gaps = 6/227 (2%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatg-tttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||| |||||| ||||||| |||| |||||||||||||||||| ||||||| |||
Sbjct: 237 cctccgttttaaaatggtttgacaccgttaactttttagcacatgtttaaccgttcatct 178
Query: 74 tattcaaacaaatttgtgaaatatgtaaaactatgtgt--acatgaaaatatatttaaca 131
|||| ||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||
Sbjct: 177 tattaaaa-aaatttgtgaaatatgtaaaactatatgtgcacatgaaagtatatttaaca 119
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaa--attttttaataagacgaat 189
||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118 atgaatcaaataatataaaaagaataaataattacttaatttttttttaataagacgaat 59
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
| ||||||||||||||||||| | ||||| ||||| |||||| ||||
Sbjct: 58 gatcaaacacgtacttaaaaaattaacggcgtcaaccattttaaaac 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaa-cattt 230
||||||||||||| ||| ||| ||||| || || ||||||| |||||||||||| |||||
Sbjct: 168 ttttttaataagatgaacggttaaacatgtgct-aaaaagttaacggtgtcaaaccattt 226
Query: 231 tgaaacgga 239
| |||||||
Sbjct: 227 taaaacgga 235
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa Indica
Group
Length = 250
Score = 240 bits (121), Expect = 8e-63
Identities = 190/212 (89%), Gaps = 12/212 (5%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 249 tactcccttcatttcaaaatgtttgacaccgttgactttttagcacatgtttaactgttc 190
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| ||||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 189 gtcttattaaaaaaaattcttgaaatatgtaaaactatacgtgtacatgaaagtatattt 130
Query: 128 aac---------aatgaatcaaatgatatgaaaagaataaataattacttaaatttttta 178
||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 129 aacaatgaatcaaatgaatcaaatgatatgaaaagaataaataattactt-aatttttta 71
Query: 179 ataagacgaatggtcaaacacgtacttaaaaa 210
||||||||||||||||||||||||||||||||
Sbjct: 70 ataagacgaatggtcaaacacgtacttaaaaa 39
Score = 71.9 bits (36), Expect = 4e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| || ||||| || || ||||||||||||||||||||||||||
Sbjct: 176 ttttttaataagacgaacagttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 234
Query: 232 gaaa 235
||||
Sbjct: 235 gaaa 238
>RF01058;MIR806;AAAA02026229.1/38478-38703 39946:Oryza sativa Indica
Group
Length = 226
Score = 240 bits (121), Expect = 8e-63
Identities = 183/200 (91%), Gaps = 4/200 (2%)
Strand = Plus / Minus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgtc 72
|||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 221 ccctccgtttcaaaatatttgactccgttgatttttttagcacatgtttgaccgttcgtc 162
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtgtacat--gaaaatatatttaac 130
||||| ||| ||||||||||||||| ||||||||| |||| || |||| ||||||||||
Sbjct: 161 ttatttaaa-aaatttgtgaaatatataaaactatatgtatatatgaaagtatatttaac 103
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatg 190
||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 102 aataaatcaaatgatatgaaaataataaataattacttaatttttttaataagacgaatg 43
Query: 191 gtcaaacacgtacttaaaaa 210
|||||||||||||| |||||
Sbjct: 42 gtcaaacacgtactaaaaaa 23
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || || ||||| ||||||| |||||| |||||
Sbjct: 151 tttttaaataagacgaacggtcaaacatgtgctaaaaaaatcaacggagtcaaatatttt 210
Query: 232 gaaacgga 239
||||||||
Sbjct: 211 gaaacgga 218
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 238 bits (120), Expect = 3e-62
Identities = 207/230 (90%), Gaps = 7/230 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||||||||||||||||||||| ||||||||||||| || |||||| | ||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactttttaagcctatgtttaatcgtt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
||||||||| ||| || ||| ||||||| ||||||||| |||| ||||||| ||||||
Sbjct: 179 cgtcttattaaaaaaa--ttgcgaaatatataaaactatatgtatacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||| ||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 61 aaatggttaaacatatac-taaaaagtcaacggtgtcaaatattttgaaa 13
Score = 87.7 bits (44), Expect = 7e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||
Sbjct: 165 ttttttaataagacgaacgattaaacataggcttaaaaagtcaacggtgtcaaacatttt 224
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 225 gaaacggagggagtat 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||| ||||||| |||||||||||||| | |||||| ||| || |||||||||||
Sbjct: 13 tttcaaaatatttgacaccgttgactttttagtatatgtttaaccatttgtcttattcaa 72
Query: 81 a 81
|
Sbjct: 73 a 73
>RF01058;MIR806;AAAA02003260.1/25355-25115 39946:Oryza sativa Indica
Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 216/242 (89%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcaca-tgtttgaccgtt 68
||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 240 tactccctctgttttaaaatgtttgacacggttgactttttagcacagtgtttgaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatatt 126
||| |||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 tgtcatatttaatttg-tttgtgaaatatgtaaaactaactgtgtacatgaaaatatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaat-tttttaataagac 185
|||||||||||||| |||||| | ||||||||| ||||||||||| || ||||||||
Sbjct: 121 taacaatgaatcaactgatatacacagaataaatgattacttaaatgttcagaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 gaatggtcaaacacgtac-taaaaagtcaacggtgtcaaacattttgaaacggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 70 gtcttattc 78
|||||||||
Sbjct: 62 gtcttattc 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| |||||||||||||| |||| || ||||||
Sbjct: 199 taaaaagtcaaccgtgtcaaacattttaaaacagagggagta 240
>RF01058;MIR806;AAAA02006511.1/7100-6860 39946:Oryza sativa Indica
Group
Length = 241
Score = 236 bits (119), Expect = 1e-61
Identities = 211/236 (89%), Gaps = 8/236 (3%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgacttttta--gcacatgtttgaccg 66
|||||| |||||||| ||||||||| | | | |||| |||||| | |||||||| ||||
Sbjct: 241 gtactcgctccgttttaaaatgtttaataccattgattttttaaagtacatgtttaaccg 182
Query: 67 ttcgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatata 124
||||||||||| ||| || ||||||||||||||||||||| |||||||||||| ||||
Sbjct: 181 ttcgtcttattaaaaaaa--ttgtgaaatatgtaaaactatatgtgtacatgaaagtata 124
Query: 125 tttaacaatgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataag 183
||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 123 tttaacaataaatcaaatgatatgaaaagaataaataattacttaaaatttttgaataag 64
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||
Sbjct: 63 acgaatgatcaaacacgtac-taaaaagccaacggtgccaaacattttgaaacgga 9
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| ||||||||||||||||||| || ||||| |||||||| || ||||||| | |||
Sbjct: 2 tactcgctccgtttcaaaatgtttggcaccgttggctttttagtacgtgtttgatcattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtac-ttaaaaagtcaacggtgtcaaacattt 230
||||||||||||||||| ||| ||||| |||| ||||||| |||| ||| | ||||||||
Sbjct: 165 ttttttaataagacgaacggttaaacatgtactttaaaaaatcaatggtattaaacattt 224
Query: 231 tgaaacgga 239
| |||||||
Sbjct: 225 taaaacgga 233
>RF01058;MIR806;AACV01014691.1/845-606 39947:Oryza sativa Japonica
Group
Length = 240
Score = 236 bits (119), Expect = 1e-61
Identities = 206/230 (89%), Gaps = 5/230 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| |||| ||||| ||||||| |||||| |||||| | ||| || |||||||
Sbjct: 239 tactccctttgttttaaaatatttgacactgttgacattttagtatatgcttaaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 179 gtcttatttaaa-aaatttgtgaaatatgtaaaactatatgtgtaaatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 120 aacaataaatcaaataatatgaaaagaataaataattacttaaattttttgaataagatg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
||||||||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 60 aatggtcaaacccgtac-taaaaagtcaacggggtcaaacattttgaaac 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 20 gtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattca 79
||||||||||||||||| |||||||||||||| || |||||||| ||| |||||||||
Sbjct: 12 gtttcaaaatgtttgaccccgttgactttttagtacgggtttgaccattcatcttattca 71
Query: 80 aa 81
||
Sbjct: 72 aa 73
>RF01058;MIR806;AAAA02002805.1/52701-52461 39946:Oryza sativa Indica
Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 204/228 (89%), Gaps = 6/228 (2%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtctta 175
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactatgtgtaca--tgaaaatatatttaacaat 133
|| ||| |||||||| |||||| |||| |||| |||| | ||||| |||||||||||||
Sbjct: 174 tt-aaaaaaatttgtaaaatatataaatctatatgtatatgtgaaagtatatttaacaat 116
Query: 134 gaatcaaatgatatgaaaagaataaataattacttaa--attttttaataagacgaatgg 191
|||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 115 gaattaaatgatatgaaaaaaataaataattacttaatttttttttaataagacgaatgg 56
Query: 192 tcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||||| ||||||||| ||| ||||||||||||| |||||||
Sbjct: 55 tcaaacacgtgtttaaaaagttaac-ttgtcaaacattttaaaacgga 9
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| || || ||||||| ||||||||||||||||||
Sbjct: 167 ttttttaataagacgaacggtcaaacatgtgct-aaaaagttaacggtgtcaaacatttt 225
Query: 232 gaaacgga 239
|||||||
Sbjct: 226 aaaacgga 233
Score = 50.1 bits (25), Expect = 2e-05
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
|||| ||||||||| ||||||||||||| ||| ||||||| | ||| ||||||||| ||
Sbjct: 2 tacttcctccgttttaaaatgtttgaca-agttaactttttaaacacgtgtttgaccatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
>RF01058;MIR806;AAAA02006403.1/1537-1777 39946:Oryza sativa Indica
Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 207/233 (88%), Gaps = 4/233 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| ||| ||||||||||| || |||||||||||
Sbjct: 240 tactccctccgtttcaaaatatttgacactgttaactttttagcatatatttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|| ||||| ||| ||| ||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 180 gttttatttaaaaaaaattgtgaaatatataaaactatatgtgtacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 120 aacaatgaattaaatgatataaaaagaataaataattatttaaattttttgaataagaca 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||| || ||| |||||| | |||||| ||| |||||||||||||||||||||
Sbjct: 60 aatcgttaaatacgtac-tcaaaagttaactttgtcaaacattttgaaacgga 9
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||| ||| |||||||| ||||||||||||| |||||||
Sbjct: 199 taaaaagttaacagtgtcaaatattttgaaacggagggagtat 241
>RF01058;MIR806;AAAA02007627.1/1870-2109 39946:Oryza sativa Indica
Group
Length = 240
Score = 234 bits (118), Expect = 5e-61
Identities = 208/233 (89%), Gaps = 5/233 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttag-cacatgtttgaccgtt 68
|||||| ||||||||||||||||| ||| |||| | |||||| ||||||||| | ||||
Sbjct: 239 tactccttccgtttcaaaatgtttaacaccgtttattttttaaacacatgtttaatcgtt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||| ||| ||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 179 tgtcttattaaaa-aaatttgtgaaatatgtaaaactatatgtgtacataaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 120 taataatgaatcaaatgatatgaaaagaataaataatcactaaaattttttaataatacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||||||||||||| |||||| |||| |||| |||| |||||||||||||
Sbjct: 60 aatggtcaaacacgtac-taaaaaatcaatggtgccaaatattttgaaacgga 9
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| || | | ||||| || ||||||| | |||||||| |||||||||
Sbjct: 165 ttttttaataagacaaacgattaaacatgtgtttaaaaaataaacggtgttaaacatttt 224
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 225 gaaacggaaggagtat 240
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||| ||||||||||||||| |||| || | |||| ||||||| || ||||||||| ||
Sbjct: 1 gtacttcctccgtttcaaaatatttggcaccattgattttttagtacgtgtttgaccatt 60
Query: 69 cgtcttatt 77
||| |||||
Sbjct: 61 cgtattatt 69
>RF01058;MIR806;AP008214.1/6309436-6309676 39947:Oryza sativa
Japonica Group
Length = 241
Score = 234 bits (118), Expect = 5e-61
Identities = 213/241 (88%), Gaps = 4/241 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
||||| ||||||||| |||||||||| | |||||| ||||| |||||||||||||| |||
Sbjct: 240 tactcactccgtttcgaaatgtttgataccgttgatttttttagcacatgtttgactgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
||||||||||||| || |||||||||||| ||||||||| |||| ||| ||||||||||
Sbjct: 180 cgtcttattcaaaaaattttgtgaaatatataaaactatatgtatacataaaaatatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
|||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||| |
Sbjct: 120 taacaatgaatcaaatgatagaaaaataattaataattacttaatttttttaataagatg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||| ||||| || ||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 60 aatggttaaacatata-ataaaaagtcaatagtgtcaaacatttcgaaacggatggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||||| || || ||||| |||||||| ||||||||||
Sbjct: 166 tttttgaataagacgaacagtcaaacatgtgctaaaaaaatcaacggtatcaaacatttc 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||| |||||||||||| ||||||||||| | |||||| ||| |||
Sbjct: 2 tactccatccgtttcgaaatgtttgacactattgactttttattatatgtttaaccattc 61
Query: 70 gtcttatt 77
|||||||
Sbjct: 62 atcttatt 69
>RF01058;MIR806;AAAA02014718.1/60336-60096 39946:Oryza sativa Indica
Group
Length = 241
Score = 232 bits (117), Expect = 2e-60
Identities = 212/240 (88%), Gaps = 4/240 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacatcgttgactttttaacacatgtttcactgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|| ||||| ||| ||| ||||||||||| |||||| ||||||||||| ||| |||||||
Sbjct: 180 gttttatt-aaaaaaaattgtgaaatatataaaactatatgtgtacatcaaagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||| ||||||| || ||||| ||| || ||||||||||| ||||||| ||||||| |
Sbjct: 121 aaccatgaatcccctgctatgaccagactacataattacttacattttttaaataagatg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||||||| |||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 61 aatggtcaaacacgtatttaaaaagtcaacggtgtcaaacattttaaaagggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 204 ttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 198 ttaaaaagtcaacgatgtcaaacattttgaaacggagggagtat 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta 51
|||||||||| ||| ||||||||||||| |||||||||||||
Sbjct: 2 tactccctcccttttaaaatgtttgacaccgttgacttttta 43
>RF01058;MIR806;AC087552.3/52194-51954 39947:Oryza sativa Japonica
Group
Length = 241
Score = 232 bits (117), Expect = 2e-60
Identities = 215/243 (88%), Gaps = 6/243 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||| ||||| |||||| |||||||||||||| ||||||| ||| |||
Sbjct: 241 gtactccctccgttttaaaatacttgacaccgttgactttttagtacatgttagactgtt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||||||||| ||| ||||| ||||||||| ||||||||| |||||||| ||| ||||||
Sbjct: 181 cgtcttattaaaaaaaatt-gtgaaatatataaaactatatgtgtacataaaagtatatt 123
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataaga 184
|||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 122 taacaacgaatcaaatgatataaaaagaataaataattacttaaatttttttgaataaga 63
Query: 185 cgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
| ||| ||||||||| ||| | |||||| |||||||||||| ||||||||||| | ||||
Sbjct: 62 caaattgtcaaacacatac-tgaaaagttaacggtgtcaaatattttgaaacgtagggag 4
Query: 245 tat 247
|||
Sbjct: 3 tat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| |||| ||||| ||||||||||||||||||| |||||
Sbjct: 167 ttttttaataagacgaacagtctaacatgtact-aaaaagtcaacggtgtcaagtatttt 225
Query: 232 gaaacggatggagta 246
||||||| ||||||
Sbjct: 226 aaaacggagggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| ||||||||||| ||||||| |||| |||||| || | |||||||| ||
Sbjct: 2 tactccctacgtttcaaaatatttgacaccgttaacttttcagtatgtgtttgacaattt 61
Query: 70 gtcttattcaaacaaattt 88
|||||||||||| ||||||
Sbjct: 62 gtcttattcaaaaaaattt 80
>RF01058;MIR806;AP008212.1/26178843-26179082 39947:Oryza sativa
Japonica Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 175/192 (91%), Gaps = 3/192 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 239 tactccctctgtttctaaatgtttgacaccgttgactttttagcacatatttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||| ||||||| || ||||||||||||||||| |||| | ||||||||| |||||||
Sbjct: 179 gtctcattcaaaaaattttgtgaaatatgtaaagctataaatatacatgaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaa-attttttaataagacg 186
||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 119 aacaatgaatcaaatgataggaaaagaattaataattacttaattttttttaataagacg 60
Query: 187 aatggtcaaaca 198
||||||||||||
Sbjct: 59 aatggtcaaaca 48
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||| ||||||| ||||||| | || || |||||||||||||||||||||||||
Sbjct: 166 tttttgaatgagacgaacggtcaaatatgtgct-aaaaagtcaacggtgtcaaacattta 224
Query: 232 gaaacggatggagtat 247
||||| || |||||||
Sbjct: 225 gaaacagagggagtat 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| || | ||||| |||||||| |||||||||||| |||
Sbjct: 2 tactccctccgtttctaaatactttatgtcgttcactttttaa-acatgtttgaccattc 60
Query: 70 gtcttattcaaacaaatt 87
|||||||| ||| |||||
Sbjct: 61 gtcttattaaaaaaaatt 78
>RF01062;MIR812;AAAA02034426.1/30822-30993 39946:Oryza sativa Indica
Group
Length = 172
Score = 230 bits (116), Expect = 8e-60
Identities = 157/168 (93%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaa 103
||||||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 2 actttttagtacatgtttgaccgttcgtcttattaaaaaaattttgtgaaatatgtaaaa 61
Query: 104 ctatgt-gtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataa 162
|||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctatattgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaataa 121
Query: 163 ttacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaa 209
|| ||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 122 atatttaaattttttgaataagacgaatggtcaaacacgtactaaaaa 169
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||| || ||||||||| |||||||||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttattcaaa 134
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaa 209
||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 41 ttttttaataagacgaacggtcaaacatgtactaaaaa 4
>RF01058;MIR806;AAAA02006724.1/5899-5657 39946:Oryza sativa Indica
Group
Length = 243
Score = 230 bits (116), Expect = 8e-60
Identities = 215/244 (88%), Gaps = 8/244 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| | |||| |||| ||||||| |||||||||||||||||| ||||||||||||
Sbjct: 242 tactcccttcatttcgaaatatttgacaccgttgactttttagcacaggtttgaccgttc 183
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||| ||| ||| |||| ||||||||||||| ||||||||||||||| || ||||
Sbjct: 182 gtcttatt-aaaaaaaattgtaaaatatgtaaaactatatgtgtacatgaaagtacattt 124
Query: 128 aacaatgaatcaaatgatatgaaaagaa----taaataattacttaaattttttaataag 183
|||||| ||||||||||||| |||| || ||| |||||| |||||||||| ||||||
Sbjct: 123 aacaataaatcaaatgatataaaaaaaataattaattaattaattaaatttttgaataag 64
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatgga 243
|||||||||||||||||||| || ||||||||| |||| ||||||||||||||||| |||
Sbjct: 63 acgaatggtcaaacacgtac-tagaaagtcaacagtgttaaacattttgaaacggaggga 5
Query: 244 gtat 247
||||
Sbjct: 4 gtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||| ||| ||||||||| ||| || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttaacactgttgactttctagtacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| |||||||| || || |||||||||||||||||||| ||||
Sbjct: 169 ttttttaataagacgaacggtcaaacctgtgct-aaaaagtcaacggtgtcaaatatttc 227
Query: 232 gaaa 235
||||
Sbjct: 228 gaaa 231
>RF01058;MIR806;AACV01027603.1/5402-5167 39947:Oryza sativa Japonica
Group
Length = 236
Score = 230 bits (116), Expect = 8e-60
Identities = 212/239 (88%), Gaps = 5/239 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||| || | |||||||||||| |||| |||||| |||||
Sbjct: 235 tactccctccgtttcaaaatgtacgatactgttgactttttaacacacgtttgatcgttc 176
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaa 129
|||||||| ||| || || |||||||||||||||| | |||||||||||||||||
Sbjct: 175 gtcttattaaaaaaa--ttacaaaatatgtaaaactatacat-catgaaaatatatttaa 119
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaa 188
|||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 118 caatgaatcaaatgatataaaaagaataaataaataattaaattttttgaataagacgaa 59
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||| |||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 58 tggtcaaacacgtac-taaaaagtcaacggtgtcaaacattttgtaactgagggagtat 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| |||
Sbjct: 2 tactccctcagttacaaaatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| | |||||| || ||||||||||||| || || |||||||
Sbjct: 162 ttttttaataagacgaacgatcaaacgtgtg-ttaaaaagtcaacagtatcgtacatttt 220
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 221 gaaacggagggagtat 236
>RF01058;MIR806;AP008214.1/26299851-26300093 39947:Oryza sativa
Japonica Group
Length = 243
Score = 230 bits (116), Expect = 8e-60
Identities = 184/203 (90%), Gaps = 4/203 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||||||| ||||||||||||| ||||||||||||| || |||||||||| || ||||||
Sbjct: 236 ctccgttttaaaatgtttgacaccgttgactttttaacatatgtttgaccatttgtctta 177
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaat 133
|| ||| || ||| ||||||||||||| |||| |||| ||| || |||||||||||||
Sbjct: 176 tttaaaaaattttatgaaatatgtaaagctatatgtatacatagaagtatatttaacaat 117
Query: 134 gaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggt 192
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 116 gaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagacgaatggt 57
Query: 193 caaacacgtacttaaaaagtcaa 215
||||||||||| |||||||||||
Sbjct: 56 caaacacgtac-taaaaagtcaa 35
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 169 tttttaaataagacaaatggtcaaacatatg-ttaaaaagtcaacggtgtcaaacatttt 227
Query: 232 gaaacgga 239
|||||||
Sbjct: 228 aaaacgga 235
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 41 ttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||||| || ||||||||| |||||||||||||||
Sbjct: 35 ttgactttttagtacgtgtttgaccattcgtcttattcaaa 75
>RF01058;MIR806;AACV01022161.1/13533-13298 39947:Oryza sativa
Japonica Group
Length = 236
Score = 230 bits (116), Expect = 8e-60
Identities = 197/219 (89%), Gaps = 5/219 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||||||||| || |||||||||||||||||||||| || ||||
Sbjct: 235 tactccctccgttttaaaatgtttgatattgttgactttttagcacatgtttaactgttc 176
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatattt 127
|||||||| || ||| | ||||||||||||||| ||||||||||||| |||||||
Sbjct: 175 gtcttattttaaaaaaataaa-aaatatgtaaaactacatgtgtacatgaaagtatattt 117
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacg 186
|| |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 116 aataatgaatcaaataatatgaaaagaataaataattatttaaatttttttaataagacg 57
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaa 225
|||||||||||||||| |||||| |||||||||||||||
Sbjct: 56 aatggtcaaacacgta-ttaaaaggtcaacggtgtcaaa 19
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 31 tttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||| ||||||| ||||| || ||||||||| |||||||||||
Sbjct: 19 tttgacaccgttgaccttttaatacgtgtttgaccattcgtcttatt 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 194 taaaaagtcaacaatatcaaacattttaaaacggagggagtat 236
>RF01058;MIR806;AACV01004856.1/662-425 39947:Oryza sativa Japonica
Group
Length = 238
Score = 230 bits (116), Expect = 8e-60
Identities = 210/238 (88%), Gaps = 5/238 (2%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||||| |||| | |||| |||||| |||| || |||| |||||||||||||||||||
Sbjct: 235 ctcccttcgttcctaaatatttgacgacgttaacctttttacacatgtttgaccgttcgt 176
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaa 129
|||||||||| || ||| ||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 175 cttattcaaaaaattttatgaaatatgtaaaactatatgtatacataaaaatatatttaa 116
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaat 189
|||| |||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 115 caataaatcaaatgataggaaaaaaat-aataattacttaacttttttaataagacgaat 57
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||| || ||||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 56 ggtcaaacatgt--ttaaaaagtcaacggcgtcaaatatttagaaacggatggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| |||
Sbjct: 2 tactccatccgtttctaaatatttgacgccgttgacttttta-aacatgtttgaccattc 60
Query: 70 gtcttatt 77
||||||||
Sbjct: 61 gtcttatt 68
>RF01062;MIR812;AP005756.3/134331-134500 39947:Oryza sativa Japonica
Group
Length = 170
Score = 228 bits (115), Expect = 3e-59
Identities = 159/170 (93%), Gaps = 4/170 (2%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaa 103
||||||||||| |||||||||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 1 actttttagcatatgtttgaccgttcgtcttattaaaaaaaatt-gttaaatatgtaaaa 59
Query: 104 ctatgtgta--catgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaata 161
|||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 60 ctatatgtatacatgaaagtatatttaacgatgaatcaaatgatatgaaaagaataaata 119
Query: 162 attacttaaa-ttttttaataagacgaatggtcaaacacgtacttaaaaa 210
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 attacttaaatttttttaataagacgaatggtcaaacacgtacttaaaaa 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||
Sbjct: 40 ttttttaataagacgaacggtcaaaca 14
>RF01062;MIR812;AP005658.3/58267-58095 39947:Oryza sativa Japonica
Group
Length = 173
Score = 228 bits (115), Expect = 3e-59
Identities = 158/170 (92%), Gaps = 3/170 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||| || |||||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 1 gacttttaagtacatgtttgaccgttcgttttattcaataaaatttatgaaatatgtaaa 60
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actatatgtgtacataaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 120
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaa 209
|| |||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 121 aaatacttaaattttttgaataagacgaatggtcaaacacgtactaaaaa 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||| || ||||||||| |||||||||||||||
Sbjct: 173 gactttttagtacgtgtttgaccattcgtcttattcaaa 135
>RF01062;MIR812;AACV01023217.1/3751-3923 39947:Oryza sativa Japonica
Group
Length = 173
Score = 228 bits (115), Expect = 3e-59
Identities = 158/170 (92%), Gaps = 3/170 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttattcaaatttttttttgaaatatgtaaa 60
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 actatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaaaaataaat 120
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaa 209
||||||||||||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 121 aattacttaaattttttgaataagacgaatggttaaacacgtactaaaaa 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||| || ||||| ||| |||||||||||||||
Sbjct: 173 gactttttagtacgtgtttaaccattcgtcttattcaaa 135
>RF01058;MIR806;AAAA02022678.1/8425-8663 39946:Oryza sativa Indica
Group
Length = 239
Score = 228 bits (115), Expect = 3e-59
Identities = 213/241 (88%), Gaps = 6/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| || |||| ||||| ||||||| |||||||||| |||||| ||||||| |||||
Sbjct: 238 tactccatctgttttaaaatatttgacaccgttgactttatagcacgtgtttgatcgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| | |||| | |||||||||||||||| |||||||||||| |||||||
Sbjct: 178 gtcttattaaaa-atatttattaaatatgtaaaactatatgtgtacatgaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataagacg 186
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 119 aacaatgaatcaaatgatatgaaaagaataaataattacttaaaatttttgaataagata 60
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||| ||||||||||||||||||||| ||||||| || ||| |||||||||| |||||
Sbjct: 59 aatg--taaacacgtacttaaaaagtcatcggtgtccaatattctgaaacggatagagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||||||||||||||| | |||||||||| || | |||||||||||||||||| |||||
Sbjct: 166 tttttaataagacgaacgatcaaacacgtgct-ataaagtcaacggtgtcaaatatttta 224
Query: 233 aaacggatggagta 246
|||| |||||||||
Sbjct: 225 aaacagatggagta 238
>RF01058;MIR806;AACV01015075.1/1512-1276 39947:Oryza sativa Japonica
Group
Length = 237
Score = 228 bits (115), Expect = 3e-59
Identities = 212/239 (88%), Gaps = 4/239 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||| ||||| ||| ||| | ||||||||||||||||| |||||| |||
Sbjct: 236 tactctctccgttttaaaatatttaacacctttgactttttagcacatatttgactattc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaact-atgtgtacatgaaaatatattta 128
|||||||| ||| ||||| ||||||||||||| | || || || ||||| ||||||||
Sbjct: 176 gtcttattaaaa-aaattcatgaaatatgtaaattttatctgcacgtgaaagtatattta 118
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaa 188
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 117 acaatgaatcaaatgatatgaaaagaataaataattacttaattttttaaataaaacgaa 58
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 57 tggt-aaaaacgtac-taaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttag 52
|||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttag 44
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||||||| |||||| | || | ||||||||||| ||||| ||| |||||
Sbjct: 163 ttttttaataagacgaatagtcaaatatgtgc-taaaaagtcaaaggtgttaaatatttt 221
Query: 232 gaaacgga 239
|||||||
Sbjct: 222 aaaacgga 229
>RF01058;MIR806;CR855021.1/42350-42118 4530:Oryza sativa (rice)
Length = 233
Score = 228 bits (115), Expect = 3e-59
Identities = 208/237 (87%), Gaps = 14/237 (5%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||
Sbjct: 227 cctccatttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttcgtctt 168
Query: 75 attcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaacaa 132
||| ||| |||||||||||||||| ||||| ||||||||||||| | |||||||| |
Sbjct: 167 attaaaaaaaatttgtgaaatatgcaaaactatatgtgtacatgata--gtatttaacca 110
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagacgaatg 190
||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 109 tgaatcaaatgatataaaaagaataaataattacttaattttttttgaataagacgaatg 50
Query: 191 gtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||| |||| ||||| ||||||||||||||| |||||||||||
Sbjct: 49 gtcaaacacgt--------agtcgacggtatcaaacattttgaaagggatggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||| | || || ||||||| ||||||||||||||||||
Sbjct: 159 ttttttaataagacgaacggtcaaatatgtgct-aaaaagttaacggtgtcaaacatttt 217
Query: 232 gaaa 235
||||
Sbjct: 218 gaaa 221
>RF01062;MIR812;AP008217.1/21142327-21142498 39947:Oryza sativa
Japonica Group
Length = 172
Score = 226 bits (114), Expect = 1e-58
Identities = 155/165 (93%), Gaps = 4/165 (2%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttattaaaa-aaatttgtgaaatatgtaaa 59
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
| ||| ||||| || ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 60 attatatgtgtatataaaagtatatttaacaatgaatcaaatgatatgaaaataataaat 119
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaacacgtact 204
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 120 aattacttaaattttttgaataagacgaatggtcaaacacgtact 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaaca 15
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||| |||| || ||||||||| |||||||||||||||
Sbjct: 172 gacttcttagtacgtgtttgaccattcgtcttattcaaa 134
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 226 bits (114), Expect = 1e-58
Identities = 201/225 (89%), Gaps = 5/225 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||| ||||||||||||||||||||| |||||||||||||||| || ||| ||||||
Sbjct: 240 gtactccttccgtttcaaaatgtttgacaccgttgactttttagcatatatttaaccgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatt 126
||||||||| ||| |||| | |||||||||||||||||| || ||||||||| ||||||
Sbjct: 180 cgtcttattaaaa-aaatctatgaaatatgtaaaactatatgggtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagac 185
||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||| |||
Sbjct: 121 taacaatgaatcaaatgatataaaaagaataaatagttacttaaattgtttgaatgagaa 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
||| ||||||||| | |||||||||||||||||||||||||||
Sbjct: 61 gaacggtcaaacatat-tttaaaaagtcaacggtgtcaaacattt 18
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||| | | | |||||||||||||||||||||||||||
Sbjct: 166 ttttttaataagacgaacggttaaatatatgc-taaaaagtcaacggtgtcaaacatttt 224
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 225 gaaacggaaggagta 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
|||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||||||
Sbjct: 18 aaatgtttgacaccgttgactttttaaaatatgtttgaccgttcttctcattcaaacaa 76
>RF01058;MIR806;AP008211.1/4813545-4813786 39947:Oryza sativa
Japonica Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 207/232 (89%), Gaps = 7/232 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgact-ttttagcacatgtttgaccgtt 68
||||||| ||||||| |||||||||||| |||||| | |||||||| |||||||||| ||
Sbjct: 241 tactcccaccgtttcgaaatgtttgacaccgttgattattttagcatatgtttgaccatt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacat--gaaaatatatt 126
||||||||| ||| |||| ||||||||||||||||||| | || || |||| ||||||
Sbjct: 181 cgtcttattaaaaaaaat--gtgaaatatgtaaaactatatatatatatgaaagtatatt 124
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 123 taacgatgaatcaaatgatatgaaaagaaaaaataattacttaaattttttaaataagac 64
Query: 186 gaatggtcaaacacgtac-ttaaaaagtcaacggtgtcaaacattttgaaac 236
|||||| |||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 63 aaatggtgaaacacgtactttaaaaaatcaatggtgtcaaacattttgaaac 12
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||
Sbjct: 167 ttttttaataagacgaatggtcaaacatatgctaaaataatcaacggtgtcaaacatttc 226
Query: 232 gaaacggatggagtat 247
||||||| |||||||
Sbjct: 227 gaaacggtgggagtat 242
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 203/229 (88%), Gaps = 4/229 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||| ||| ||| ||||||||||||||||||||||| |||||||
Sbjct: 241 tactccctccgttttaaaatatttaacaccgttgactttttagcacatgtttaaccgttc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|| ||||| ||| ||| |||||||||||||| ||| |||||||||||| |||||||
Sbjct: 181 gttttatttaaatttttttttgaaatatgtaaaattatatgtgtacatgaaagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 aacaataaattaaatgatataaaaagaataaataattacttaaattttttgaataagacg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||||||||| || |||||| ||||| | |||||||||||||||
Sbjct: 61 aatggtcaaacacgcac-taaaaaatcaacaatatcaaacattttgaaa 14
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||||| || ||||| ||||||| | ||||||||| ||||||||||||||
Sbjct: 14 tttcaaaatgtttgatattgttgattttttagtgcgtgtttgaccattcgtcttattcaa 73
Query: 81 a 81
|
Sbjct: 74 a 74
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||||||||| ||| ||||| ||||||| ||||||
Sbjct: 200 taaaaagtcaacggtgttaaatattttaaaacggagggagta 241
>RF01058;MIR806;AC105928.2/57418-57177 39947:Oryza sativa Japonica
Group
Length = 242
Score = 226 bits (114), Expect = 1e-58
Identities = 213/241 (88%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||||||||| ||||||| |||||||||||| | ||||||||| ||||
Sbjct: 241 tactccctctgtttcaaaatatttgacactgttgactttttaatatatgtttgactgttc 182
Query: 70 gtcttat-tcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||||||| | ||| ||| || |||||||||||||||||| |||||||||||| ||||||
Sbjct: 181 gtcttatattaaaaaaaattatgaaatatgtaaaactatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 121 taacaatgaattaaatgatatgaaaagaataaataattgcttaaattttttaaataagat 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||||||| ||||||| | |||||||| || ||||| ||||||| |||||
Sbjct: 61 gaatggtcaaacacgta-ttaaaaaattaacggtgtgcaatattttaaaacggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 179 ataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||| |||||||| || ||||||||||||| |||||||| |||||||||| |
Sbjct: 175 ataagacgaacagtcaaacatata-ttaaaaagtcaacagtgtcaaatattttgaaacag 233
Query: 239 atggagtat 247
| |||||||
Sbjct: 234 agggagtat 242
>RF01058;MIR806;AC060755.9/90452-90213 4530:Oryza sativa (rice)
Length = 240
Score = 224 bits (113), Expect = 5e-58
Identities = 212/240 (88%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||| ||||||||||||| | |||||||||||||| |||||||||| ||
Sbjct: 239 tactctctccgttttaaaatgtttgacaccattgactttttagcatatgtttgaccattt 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| ||| ||||||||||||||||||||| ||||| || ||| |||||||
Sbjct: 179 gtcttattaaaa-aaacttgtgaaatatgtaaaactatatgtgtatataaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| |||| ||||||||| ||| |||||||||||||||||||||||| ||||||| |
Sbjct: 120 aacaattaatcgaatgatatggaaaaaataaataattacttaaattttttaaataagatg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| ||| ||||||||||||||| ||||| ||||||||| ||| ||||||
Sbjct: 60 aatggtcaaacatatac-taaaaagtcaacggtatcaaatattttgaaatggagggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||| ||||| | |||||||||||||| | |||||||||| ||
Sbjct: 1 gtactccctccatttcaaaatatttgataccgttgactttttagtatatgtttgaccatt 60
Query: 69 cgtcttatt 77
| |||||||
Sbjct: 61 catcttatt 69
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| |||||||||||| | || |||||||||| |||||||||||||||
Sbjct: 166 ttttttaataagacaaatggtcaaacatatgct-aaaaagtcaatggtgtcaaacatttt 224
Query: 232 gaaacgga 239
|||||||
Sbjct: 225 aaaacgga 232
>RF01058;MIR806;ABRL01000721.1/4249-4012 65489:Oryza barthii
Length = 238
Score = 224 bits (113), Expect = 5e-58
Identities = 210/238 (88%), Gaps = 7/238 (2%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
|||||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||
Sbjct: 234 tccctccgtttctaaatgtttgatactgttgactttttagcacatgtttgaccgtccgtc 175
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaac 130
||||| ||| || ||||||||||||||||||||| |||| ||| ||| ||||||||||
Sbjct: 174 ttattaaaaaaa--ttgtgaaatatgtaaaactatatgtatacataaaagtatatttaac 117
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatg 190
|||||||||||||||||||||||||| ||||||||||| | ||||||||||||| |||||
Sbjct: 116 aatgaatcaaatgatatgaaaagaattaataattacttgatttttttaataagatgaatg 57
Query: 191 gtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||| | || || ||||||||||| | |||||| |||| ||||| ||||||||||
Sbjct: 56 gtcaaata--tatttaaaaaagtcaacagcgtcaaatatttagaaacagatggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||| | ||||||||| || || ||||||||||| || ||||||||||
Sbjct: 164 ttttttaataagacggacggtcaaacatgtgct-aaaaagtcaacagtatcaaacattta 222
Query: 232 gaaacgga 239
||||||||
Sbjct: 223 gaaacgga 230
>RF01058;MIR806;AACV01002983.1/10960-10719 39947:Oryza sativa
Japonica Group
Length = 242
Score = 224 bits (113), Expect = 5e-58
Identities = 175/192 (91%), Gaps = 4/192 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 tactccctccgtttttaaatgtttaacatcgttgactttttagcacatgtttgaccgttc 182
Query: 70 gtcttattcaaacaaatt-tgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
|| ||||| ||| ||| | |||||||||| ||||||||| |||| ||||||| ||||||
Sbjct: 181 gttttatttaaaaaaaatatgtgaaatatataaaactatatgtatacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
|||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 121 taacaatgaatcaaataatatgaaaagaattaataattactt-aattttttaataagaca 63
Query: 187 aatggtcaaaca 198
||||||||||||
Sbjct: 62 aatggtcaaaca 51
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| ||||||||| || || |||||||||||| ||| ||||||||
Sbjct: 168 tttttaaataaaacgaacggtcaaacatgtgct-aaaaagtcaacgatgttaaacattta 226
Query: 232 gaaacggatggagtat 247
||||||| |||||||
Sbjct: 227 aaaacggagggagtat 242
>RF01058;MIR806;AL713932.4/119735-119496 4530:Oryza sativa (rice)
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 138/144 (95%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 105 tatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataatt 164
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 143 tatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaagaaaaaataatt 84
Query: 165 acttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtca 223
||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 83 acttaaattttttgaataagacgaacggtcaaacacgtac-taaaaagtcaacggtgtca 25
Query: 224 aacattttgaaacggatggagtat 247
|||||||||||||||| |||||||
Sbjct: 24 aacattttgaaacggagggagtat 1
Score = 119 bits (60), Expect = 2e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccgttc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
>RF01058;MIR806;AAAA02013694.1/9956-10195 39946:Oryza sativa Indica
Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 185/203 (91%), Gaps = 6/203 (2%)
Strand = Plus / Minus
Query: 40 gttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgt 99
||||||||||||| | || ||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 208 gttgactttttagtaaatatttgaccgttcgtcttattaaaa-aaatttgtgaaatatgt 150
Query: 100 aaaactat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatg-aaaagaat 156
|||||||| ||||| |||||| ||||||||| ||| |||||||||||||| |||| |||
Sbjct: 149 aaaactatatgtgtatatgaaagtatatttaaaaataaatcaaatgatatgaaaaaaaat 90
Query: 157 aaataattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaagtcaa 215
|||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 89 aaataattacttaatttttttaaataagacgaatggtcaaatacgtac-taaaaagtcaa 31
Query: 216 cggtgtcaaacattttgaaacgg 238
|||||| ||||||||||||||||
Sbjct: 30 cggtgttaaacattttgaaacgg 8
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||||||||| ||| |||||||||||||| || | ||||||| |||||||||||
Sbjct: 8 ccgtttcaaaatgtttaacaccgttgactttttagtacgtatttgaccattcgtcttatt 67
Query: 78 caaacaaatt 87
||| |||||
Sbjct: 68 taaaaaaatt 77
>RF01058;MIR806;AAAA02021981.1/21983-21742 39946:Oryza sativa Indica
Group
Length = 242
Score = 222 bits (112), Expect = 2e-57
Identities = 216/243 (88%), Gaps = 7/243 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 241 tactccctccgtttcaaa-tgtttgacaccgttgactttttagcacgtgtttgaccattc 183
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaa-aactat--gtgtacatgaaaatatatt 126
|||||||||||| ||||| || ||||||||| |||||| ||||| |||| | ||| ||
Sbjct: 182 gtcttattcaaaaaaattagtaaaatatgtagtaactatatgtgtatatgatagtatgtt 123
Query: 127 taacaatgaa-tcaaatgatatgaaaagaataaataattacttaaatttttt-aataaga 184
|| | || | ||||||||||||| |||||||||| |||||||||||||||| |||||||
Sbjct: 122 tagctctggactcaaatgatatgataagaataaatcattacttaaattttttgaataaga 63
Query: 185 cgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
|||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 agaatggtcaaacacgtgct-aaaaagtcaacggtgtcaaacattttgaaacggagggag 4
Query: 245 tat 247
|||
Sbjct: 3 tat 1
Score = 111 bits (56), Expect = 5e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccattc 61
Query: 70 gtcttattcaaa 81
|||||||||||
Sbjct: 62 ttcttattcaaa 73
Score = 95.6 bits (48), Expect = 3e-19
Identities = 71/76 (93%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||
Sbjct: 169 tttttgaataagacgaatggtcaaacacgtgc-taaaaagtcaacggtgtcaaaca-ttt 226
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 227 gaaacggagggagtat 242
>RF01058;MIR806;AACV01006891.1/73451-73212 39947:Oryza sativa
Japonica Group
Length = 240
Score = 222 bits (112), Expect = 2e-57
Identities = 208/234 (88%), Gaps = 7/234 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||| ||||||||||| |||||| | || |||||||||||||||||| |||||||
Sbjct: 239 tactcccaacgtttcaaaatacttgacaccattaactttttagcacatgtttaaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||| ||| || ||| | |||||||||||||||| || | ||||||| |||||||
Sbjct: 179 gtcttattaaaa-aagtttataaaatatgtaaaactatatgggtgcatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattac-ttaaatttttt-aataagac 185
|||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 120 aacaatgaatcaaatgatataaaaagaataaataattactttaaattttttgaataagac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||| | ||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 60 gaatggttagacacgtact--aaaagtcaacggtatcaaacattttgaaacgga 9
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||||||||||||||| | ||||||| |||||| || ||| | ||| |||
Sbjct: 2 tactctctccgtttcaaaatgtttgataccgttgac-ttttagtacgtgtctaaccattc 60
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 61 gtcttattcaaa 72
Score = 52.0 bits (26), Expect = 4e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| || | |||||||| || |||||||| |||||
Sbjct: 166 ttttttaataagacgaacggttaaacatgtgc-taaaaagttaatggtgtcaagtatttt 224
Query: 232 gaaacg 237
||||||
Sbjct: 225 gaaacg 230
>RF01058;MIR806;AP008209.1/33469259-33469499 39947:Oryza sativa
Japonica Group
Length = 241
Score = 222 bits (112), Expect = 2e-57
Identities = 213/242 (88%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||||||||||| | ||||||||||||||||| ||| |||||||
Sbjct: 240 tactccctccgtttctaaatgtttgacaccattgactttttagcacatatttaaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||| ||| || ||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 180 gtcttatttaaaaaattttgtgaaatatgtaaaactatatgtatacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatg-aaaagaataaataattacttaaattttttaataagacg 186
||||||||||||||| ||| | |||| ||| |||| ||||||| |||||||||||||||
Sbjct: 120 aacaatgaatcaaataataggaaaaaaaattaatagttacttattttttttaataagacg 61
Query: 187 aatggtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|||||||||||| || || ||||| ||||||| |||||| |||| | ||||||||||||
Sbjct: 60 aatggtcaaaca--tatttaaaaaaatcaacggcgtcaaatatttgggaacggatggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||| ||| | || || |||||||||| ||||||||||||||
Sbjct: 167 tttttaaataagacgaacggttaaatatgtgct-aaaaagtcaatggtgtcaaacattta 225
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 226 gaaacggagggagtat 241
>RF01058;MIR806;AAAA02031935.1/254-13 39946:Oryza sativa Indica
Group
Length = 242
Score = 222 bits (112), Expect = 2e-57
Identities = 216/243 (88%), Gaps = 7/243 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||
Sbjct: 241 tactccctccgtttcaaaatgtttgacaccgttgactttt-atcacatgtgtgaccgttc 183
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 182 atcttattcaacaaaaattgtgaaatatgtaaaactatatgtgtacatgaaagtatattt 123
Query: 128 aacaatgaatcaaatgat-atgaa-aagaataaataattacttaaattt-tttaataaga 184
|||||| ||||| ||||| ||||| || ||||||||||| ||||||||| || ||||||
Sbjct: 122 aacaataaatcagatgatgatgaacaaaaataaataattgcttaaatttcttgaataagc 63
Query: 185 cgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
||||||||||| || |||| ||| ||||||||||||||||| ||||||||| ||| ||||
Sbjct: 62 cgaatggtcaagcatgtac-taagaagtcaacggtgtcaaagattttgaaatggagggag 4
Query: 245 tat 247
|||
Sbjct: 3 tat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 207 aaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 202 aaaagtcaacggtgtcaaacattttgaaacggagggagtat 242
>RF01058;MIR806;AAAA02018287.1/668-427 39946:Oryza sativa Indica
Group
Length = 242
Score = 222 bits (112), Expect = 2e-57
Identities = 176/191 (92%), Gaps = 6/191 (3%)
Strand = Plus / Minus
Query: 59 tttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatg 116
||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||
Sbjct: 189 tttgaccgttcgtcttattaaaaaaaatta-tgaaatatgtaaaactatatgtgtacatg 131
Query: 117 aaaatatatttaacaatgaatcaaatgatatgaaaagaataaataattacttaa-atttt 175
||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 130 aaagtatatttaacaatgaatcaaatgatatgaaaataataaataattacttaatttttt 71
Query: 176 ttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||
Sbjct: 70 ttaataagacgaatggtcaaacacata-ttaaaaaatcaacggt-tcaaacattttgaaa 13
Query: 236 cggatggagta 246
|||| ||||||
Sbjct: 12 cggagggagta 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||| | |||||| |||||| | ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttga-accgttgattttttaatatgtgtttgaccattc 60
Query: 70 gtcttattcaaacaaatt 87
|||||||| ||| |||||
Sbjct: 61 gtcttattaaaaaaaatt 78
>RF01058;MIR806;AP008211.1/11219819-11220068 39947:Oryza sativa
Japonica Group
Length = 250
Score = 222 bits (112), Expect = 2e-57
Identities = 204/230 (88%), Gaps = 11/230 (4%)
Strand = Plus / Minus
Query: 11 actccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcg 70
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
Sbjct: 250 actccctccgtttcaaaatatttgacaccgttgactttttagcacatgtttgaccgtttg 191
Query: 71 tcttattcaaac-----aaa--tttgtgaaatatgtaaaactatgtg--tacatgaaaat 121
||||||||||| ||| |||||||||||||||||| ||| || |||||||||||
Sbjct: 190 tcttattcaaaagttaaaaacttttgtgaaatatgtaaaattatatgcctacatgaaaat 131
Query: 122 atatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aat 180
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 130 atatttaacaatgaatcaaatgataagaaaagaattaataattacttaaattttttgaat 71
Query: 181 aagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
|||||||| |||||| | || | ||||||||||||| |||||||||||
Sbjct: 70 aagacgaacagtcaaatatgtgc-taaaaagtcaacgacgtcaaacattt 22
Score = 87.7 bits (44), Expect = 7e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 22 aaatgtttgacgtcgttgactttttagcacatatttgactgttcgtcttattcaaa 77
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| |||||||| || ||||||||| || || |||||||||||||||||||| ||||||
Sbjct: 179 ttttgaataagacaaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaatattttg 237
Query: 233 aaacggatggagt 245
||||||| |||||
Sbjct: 238 aaacggagggagt 250
>RF01058;MIR806;AP008207.1/25048910-25049151 39947:Oryza sativa
Japonica Group
Length = 242
Score = 220 bits (111), Expect = 7e-57
Identities = 209/237 (88%), Gaps = 11/237 (4%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||| |||
Sbjct: 241 tactccctccatttcaaaatgtttgacacagttgattttttaagcacatgtttgactgtt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
| |||||| ||| || ||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 181 caccttattaaaaaaa--ttgtgaaatatataaaactatatgtgtacatgaaagtatatt 124
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt----aataa 182
||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 123 taacaataaatcaaatgatatgaaaagaataaataactacttaaatttttttttgaataa 64
Query: 183 gacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||||||||| ||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 63 gatgaatggtcaaagacgtact--aaaaatcaacggtgtcaaacattttaaaacgga 9
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||| ||| |||||||| || |||||||| ||||| ||||||||||||||
Sbjct: 167 ttttttaataaggtgaacagtcaaacatgtgcttaaaaaatcaactgtgtcaaacatttt 226
Query: 232 gaaacggatggagtat 247
|||| ||| |||||||
Sbjct: 227 gaaatggagggagtat 242
Score = 60.0 bits (30), Expect = 2e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
|||||||| ||||||||||||| |||||| ||||||| || | ||||||| ||| |||||
Sbjct: 8 ctccgttttaaaatgtttgacaccgttga-tttttagtacgtctttgaccattcatctta 66
Query: 76 ttcaaa 81
||||||
Sbjct: 67 ttcaaa 72
>RF01058;MIR806;AACV01018965.1/447-687 39947:Oryza sativa Japonica
Group
Length = 241
Score = 220 bits (111), Expect = 7e-57
Identities = 214/242 (88%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 240 tacttcctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgactattc 181
Query: 70 gtcttattc-aaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||| ||| ||| || |||||||||||||| ||| |||||||||||| ||||||
Sbjct: 180 gtcttattttaaaaaaaattatgaaatatgtaaaattatatgtgtacatgaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaa-taaataattacttaaattttttaataagac 185
|||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||
Sbjct: 120 taacaatgaatcaaatgatatgaaaaaaaataaataattacttaatttttttaataagac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|| |||| ||||| || || |||||| |||||| |||||||||||||||| |||||
Sbjct: 60 ga-tggttaaacatgtgct-aaaaagcatacggtgcataacattttgaaacggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 83.8 bits (42), Expect = 1e-15
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
|||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 173 aataagacgaatagtcaaacatgtgct-aaaaagtcaacggtgtcaaacattttgaaacg 231
Query: 238 ga 239
||
Sbjct: 232 ga 233
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgttt 61
||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgttatgcaccgtatgctttttagcacatgttt 53
>RF01058;MIR806;AP008209.1/34522251-34522486 39947:Oryza sativa
Japonica Group
Length = 236
Score = 220 bits (111), Expect = 7e-57
Identities = 205/229 (89%), Gaps = 8/229 (3%)
Strand = Plus / Minus
Query: 22 ttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||||||||| ||||||||||||| || ||||||||||||| |||||||| ||
Sbjct: 224 ttcaaaatgtttgacaccgttgactttttaacatatgtttgaccgtttgtcttatt--aa 167
Query: 82 caaatttgtgaaatatgtaaaa--ctatgtgtacatgaaaatatatttaacaatgaatca 139
||| || ||||||| |||||| |||||||||||| || ||||||||||||| |||||
Sbjct: 166 aaaaattatgaaatacgtaaaattatatgtgtacatg-aagtatatttaacaataaatca 108
Query: 140 aatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaaca 198
|||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 107 aatgatat-aaaaaaataaataattacttaaattttttgaataagataaatggtcaaaca 49
Query: 199 cgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 cgtac-tataaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| |||||||||| ||| || ||||||||| ||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttatagtacgtgtttgaccattt 61
Query: 70 gtcttattcaaa 81
|||||||||||
Sbjct: 62 atcttattcaaa 73
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 163 ttttttaataagacaaacggtcaaacatatg-ttaaaaagtcaacggtgtcaaacatttt 221
Query: 232 gaa 234
|||
Sbjct: 222 gaa 224
>RF01058;MIR806;AP005885.3/85239-85476 39947:Oryza sativa Japonica
Group
Length = 238
Score = 220 bits (111), Expect = 7e-57
Identities = 211/240 (87%), Gaps = 7/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||||||| ||||| ||||||| |||| ||||||||||| |||||||||||||
Sbjct: 237 tacttcctccgttttaaaatatttgacaccgttaactttttagcatatgtttgaccgttt 178
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| | | ||||| || ||||||||| |||||||||||| |||||||
Sbjct: 177 gtcttattaaaa---actcttgaaaaatataaaactatatgtgtacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaaagaatgaataattatttaaattttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||| ||||||| |||||| | ||| |||||||||||||||||| ||| ||||||
Sbjct: 60 aatggtcaagcacgtac-taaaaatttaactgtgtcaaacattttgaaatggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||||||||||||||||| ||| | ||||||| || || |||||| |||
Sbjct: 2 tactccctccatttcaaaatgtttgacacagttaaatttttagtacgtgcttgaccattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 54.0 bits (27), Expect = 1e-06
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
||||||||||||| || ||||||||| | || ||||||| |||||||||||| |||||
Sbjct: 165 tttttaataagacaaacggtcaaacatatgct-aaaaagttaacggtgtcaaatatttta 223
Query: 233 aaacgga 239
|||||||
Sbjct: 224 aaacgga 230
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 220 bits (111), Expect = 7e-57
Identities = 174/193 (90%), Gaps = 4/193 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 tactctctccgtttctaaatgtttgacatcgttgactttttagcacatgcttgaccgttc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|| ||||| ||| || ||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 181 gttttatttaaaaaattttgtgaaatatgtaaaactatatgtatacatgaaactatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaa--attttttaataagac 185
||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||| |
Sbjct: 121 aacaatgaatcaaatgatagaaaaataattaataattacttaatttttttttaataaggc 62
Query: 186 gaatggtcaaaca 198
|||||||||||||
Sbjct: 61 gaatggtcaaaca 49
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| |||||| || || || |||||||||||| ||||||||||||
Sbjct: 168 tttttaaataaaacgaacggtcaagcatgtgct-aaaaagtcaacgatgtcaaacattta 226
Query: 232 gaaacgga 239
||||||||
Sbjct: 227 gaaacgga 234
>RF01058;MIR806;AAAA02018392.1/9429-9624 39946:Oryza sativa Indica
Group
Length = 196
Score = 218 bits (110), Expect = 3e-56
Identities = 166/180 (92%), Gaps = 6/180 (3%)
Strand = Plus / Minus
Query: 39 cgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatg 98
||||||||||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 187 cgttgactttttagcacatatttgacctttcgtcttattaaaa--aatttatgaaatatg 130
Query: 99 taaaactat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaat 156
||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 129 taaaactatatgtgtatatgaaagtatatttaacaatgaatcaaatgatatgaaaagaat 70
Query: 157 aaataattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaagtcaa 215
||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct: 69 aaataattacttaaattttttaaacaagacgaatggtcaaacacgt-gttaaaaagtcaa 11
Score = 60.0 bits (30), Expect = 2e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 168 taaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgt 221
||||||||||||||||||||| ||||||| | || | |||||||||||||||||
Sbjct: 139 taaattttttaataagacgaaaggtcaaatatgtgc-taaaaagtcaacggtgt 191
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 41 ttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||| ||| ||||||||| ||||||||
Sbjct: 11 ttgactttttaacacgtgtttgaccattcgtctt 44
>RF01058;MIR806;AACV01024800.1/18542-18302 39947:Oryza sativa
Japonica Group
Length = 241
Score = 218 bits (110), Expect = 3e-56
Identities = 192/217 (88%), Gaps = 3/217 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
|||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 236 cctccgtttcgaaatgtttgacaccgttgactttttagcagatgtttgaccgttcgtctt 177
Query: 75 attcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaa 132
||||||| | |||||||||||| ||||| ||| || ||||| || |||||||||||||
Sbjct: 176 attcaaaaacttttgtgaaatatataaaattatatgcctacataaagatatatttaacaa 117
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggt 192
|||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||| |||
Sbjct: 116 tgaatcaaatgatatgaaaagaattaataattacttaattttttaaataaaacgaacggt 57
Query: 193 caaacacgtacttaaaaagtcaacggtgtcaaacatt 229
||||| || | ||| ||||||| || ||||||||||
Sbjct: 56 taaacatgtgc-taagaagtcaatggcgtcaaacatt 21
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| | || |||||||||||||||||||||||||
Sbjct: 168 tttttgaataagacgaacggtcaaacatctgct-aaaaagtcaacggtgtcaaacatttc 226
Query: 232 gaaacgga 239
||||||||
Sbjct: 227 gaaacgga 234
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 27 aatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||| | ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 21 aatgtttgacgccattgacttcttagcacatgtttaaccgttcgttttatt 71
>RF01058;MIR806;AL731600.3/67344-67602 39947:Oryza sativa Japonica
Group
Length = 259
Score = 218 bits (110), Expect = 3e-56
Identities = 198/223 (88%), Gaps = 7/223 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 258 tactccatccgtttcaaaatgcttgacatcgttgactttttagtgcatgtttgaccgttc 199
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
||||||| ||| || || | |||||||||||||||| |||||||| ||| |||||||
Sbjct: 198 atcttattaaaaaaa--ttataaaatatgtaaaactatatgtgtacataaaagtatattt 141
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagac 185
|||||||||||||||||||| ||||||||||||||||||| || |||||| ||||||||
Sbjct: 140 aacaatgaatcaaatgatataaaaagaataaataattactcaattttttttgaataagac 81
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||||| |||||| |||| ||||| |||||||||||||
Sbjct: 80 aaatggtcaaatacgtac-taaatagtcatcggtgtcaaacat 39
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| ||| ||||||||| | ||| |||||||||||| |||||| ||||||
Sbjct: 185 ttttttaataagatgaacggtcaaacatgcact-aaaaagtcaacgatgtcaagcatttt 243
Query: 232 gaaacggatggagtat 247
||||||||||||||||
Sbjct: 244 gaaacggatggagtat 259
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgac 45
||||||||| ||||||||||||||||||||| ||||
Sbjct: 2 tactccctctgtttcaaaatgtttgacatcgatgac 37
Score = 44.1 bits (22), Expect = 0.001
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 28 atgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||| || ||||| ||||| || | ||||||| || ||||||||||||
Sbjct: 39 atgtttgacaccgatgactatttagtacgtatttgaccatttgtcttattcaaa 92
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 218 bits (110), Expect = 3e-56
Identities = 171/189 (90%), Gaps = 3/189 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||
Sbjct: 236 tccctccatttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttcgtc 177
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaac 130
||||||||| | ||||| |||||| ||||| ||| || ||||| ||||||||||||||
Sbjct: 176 ttattcaaaaacttttgtaaaatatataaaattatatgcctacataaaaatatatttaac 117
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
|||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 116 aatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaac 57
Query: 190 ggtcaaaca 198
|||||||||
Sbjct: 56 ggtcaaaca 48
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||| ||||| || || |||||||||||||| |||||||||||
Sbjct: 166 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtatcaaacatttt 224
Query: 232 gaaa 235
||||
Sbjct: 225 gaaa 228
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 tgtttgaccgttcgtcttattcaaa 81
|||||||||||||||||||||||||
Sbjct: 48 tgtttgaccgttcgtcttattcaaa 72
>RF01058;MIR806;AAAA02034792.1/4708-4947 39946:Oryza sativa Indica
Group
Length = 240
Score = 218 bits (110), Expect = 3e-56
Identities = 204/227 (89%), Gaps = 10/227 (4%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgaca-tc-gttgactttttagcacatgtttgaccgt 67
||||||||||| ||||||||| |||||| || ||||| |||||||||||||||||||||
Sbjct: 239 tactccctccggttcaaaatgattgacactctgttgattttttagcacatgtttgaccgc 180
Query: 68 tcgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatat 125
|||||||||| || || ||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 179 tcgtcttatt--aaaaattttgtgaaatatgtaaaactatatgtgtacatgaaagtatat 122
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataag 183
||||||| ||| ||||||| || |||| |||||||||||||||||||||||| ||||||
Sbjct: 121 ttaacaacgaaccaaatgacat-aaaataataaataattacttaaatttttttgaataag 63
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
| ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 atgaatgatcaaacacgtac-taaaaagtcaacggtgtcaaacattt 17
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
|||||||||||| |||||||||||||| || ||||||| | ||| ||||||||||| |||
Sbjct: 17 aaatgtttgacaccgttgactttttagtacgtgtttgatcattcatcttattcaaaaaaa 76
Query: 86 ttt 88
|||
Sbjct: 77 ttt 79
Score = 44.1 bits (22), Expect = 0.001
Identities = 65/77 (84%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaac--ggtgtcaaacattt 230
||||||||||||||| ||||||||| || | |||||| ||||| ||||||| |||||
Sbjct: 165 tttttaataagacgagcggtcaaacatgtgc-taaaaaatcaacagagtgtcaatcattt 223
Query: 231 tgaaacggatggagtat 247
|||| |||| |||||||
Sbjct: 224 tgaaccggagggagtat 240
>RF01058;MIR806;AP008212.1/5644176-5643940 39947:Oryza sativa
Japonica Group
Length = 237
Score = 218 bits (110), Expect = 3e-56
Identities = 206/234 (88%), Gaps = 8/234 (3%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||| ||||||||||||| ||||||| ||||||||||||||| || | | ||||||
Sbjct: 237 gtactccatccgtttcaaaatatttgacactgttgactttttagcatatatctaaccgtt 178
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
| ||||||| ||| |||| || |||||||||||||||| |||||||| ||| ||||||
Sbjct: 177 catcttattaaaaaaaatatg--aaatatgtaaaactatatgtgtacataaaagtatatt 120
Query: 127 taacaatgaatcaaat-gatatgaaaagaataaataattacttaaattttttaataagac 185
|||||||||||||| | ||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 119 taacaatgaatcaatttgatgtgaaaacaataaataattactt---ttttttaataagac 63
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||||||||||||||| ||||| | ||||||||||||||||||||||||||
Sbjct: 62 gaatggtcaaacacgtactaaaaaatttaacggtgtcaaacattttgaaacgga 9
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 195 taaaaagtcaacagtgtcaaatattttgaaacggatggagta 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 16 ctccgtttcaaaatgtttgacatcgtt-gactttttagcacatgtttgaccgttcgtctt 74
|||||||||||||||||||||| |||| | ||||||| || ||||||||| ||||||||
Sbjct: 8 ctccgtttcaaaatgtttgacaccgttaaattttttagtacgtgtttgaccattcgtctt 67
Query: 75 att 77
|||
Sbjct: 68 att 70
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 218 bits (110), Expect = 3e-56
Identities = 212/241 (87%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||| ||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 238 gtactctctccgtttctaaatatttgacaccgttgactttttagcacatgtttaaccgtt 179
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||||||||||||| ||| |||||||||||||||||| ||||| ||||| ||| ||||||
Sbjct: 178 cgtcttattcaaa-aaaattgtgaaatatgtaaaactatatgtatacataaaagtatatt 120
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||||||| |||||||||||| ||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 119 taacaataaatcaaatgataggaaaagaattaataatttctt-aattttttaataagaca 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||| |||||| | || |||||||||||||| |||||| |||| ||| ||||||||||
Sbjct: 60 aatagtcaaatatgt-tttaaaaagtcaacgacgtcaaatatttaaaaatggatggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 164 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaatattta 222
Query: 232 gaaacgga 239
||||||||
Sbjct: 223 gaaacgga 230
>RF01058;MIR806;AAAA02007628.1/21696-21454 39946:Oryza sativa Indica
Group
Length = 243
Score = 218 bits (110), Expect = 3e-56
Identities = 201/227 (88%), Gaps = 7/227 (3%)
Strand = Plus / Minus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
||||||||||||| |||||| |||||| || |||||||||||||||||||||| ||| ||
Sbjct: 224 aaaatgtttgacaccgttgattttttaacatatgtttgaccgttcgtcttattaaaaaaa 165
Query: 85 atttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatcaaat 142
|| || |||||||||||||||| ||||| |||||| ||||||||||||| ||||||||
Sbjct: 164 atatg--aaatatgtaaaactatatgtgtatatgaaagtatatttaacaataaatcaaat 107
Query: 143 gatatgaaaagaataaataattacttaaatttttt--aataagacgaatggtcaaacacg 200
||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 106 gatatgagaagtataaataattacttaaatttttttgaataagacgaatggtcaaataca 47
Query: 201 tacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||| ||| |||| ||| |||||||| ||||||||||||| |||||||
Sbjct: 46 tac-taacaagttaacagtgtcaaatattttgaaacggagggagtat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| ||| |||| |||| | | ||||||| |||
Sbjct: 2 tactccctccgtttcaaaatatttgacactgttaacttgttagtatgtatttgaccattc 61
Query: 70 gtcttattcaaacaaattt 88
|||||||||||| ||||||
Sbjct: 62 gtcttattcaaaaaaattt 80
Score = 63.9 bits (32), Expect = 1e-09
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 166 ttttttaataagacgaacggtcaaacatatg-ttaaaaaatcaacggtgtcaaacatttt 224
>RF01058;MIR806;AAAA02007632.1/1496-1239 39946:Oryza sativa Indica
Group
Length = 258
Score = 218 bits (110), Expect = 3e-56
Identities = 179/197 (90%), Gaps = 5/197 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
||||| |||||||||||||| ||||| | |||||||||||| | | |||||||||||||
Sbjct: 257 tactctctccgtttcaaaatatttgatactgttgactttttaagtatatgtttgaccgtt 198
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatt 126
||||||||| ||| || ||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 197 cgtcttattaaaa-aattttgtgaaatatgtaaaaccatatgtgtatatgaaagtatatt 139
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||
Sbjct: 138 taacaatgaatcaaatgatatgaaaaaaataaataattatttaaattttttgaataagac 79
Query: 186 gaatggtcaaacacgta 202
|||||||||||||||||
Sbjct: 78 gaatggtcaaacacgta 62
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||||||||||||||| ||||||||| |||||||||||||||| || ||||| ||
Sbjct: 180 aaattttttaataagacgaacggtcaaacatatacttaaaaagtcaacagtatcaaatat 239
Query: 229 tttgaaacgga 239
|||||||||||
Sbjct: 240 tttgaaacgga 250
>RF01058;MIR806;AAAA02016981.1/697-450 39946:Oryza sativa Indica
Group
Length = 248
Score = 216 bits (109), Expect = 1e-55
Identities = 206/237 (86%), Gaps = 11/237 (4%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||
Sbjct: 248 gtactccctctatttcaaaatgtttgacaccgttaactttttagcatatgtttaaccgtt 189
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta---------catgaaa 119
||||||||| ||| ||||||||||||||||||||||||| |||| ||| |||
Sbjct: 188 cgtcttattaaaa-aaatttgtgaaatatgtaaaactatatgtatacattatacataaaa 130
Query: 120 atatatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-a 178
||||||||| ||||||| |||||||||||||| |||||||||||||| ||| ||||| |
Sbjct: 129 gtatatttaataatgaataaaatgatatgaaaaaaataaataattactcaaaatttttga 70
Query: 179 ataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||| | ||||||||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 69 ataaaatgaatggtcaaatacgtacttaaaaagtcaatggtgttaaacattttgaaa 13
Score = 63.9 bits (32), Expect = 1e-09
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| | || ||||||| ||||||||||||||||||
Sbjct: 174 ttttttaataagacgaacggttaaacatatgct-aaaaagttaacggtgtcaaacatttt 232
Query: 232 gaaa 235
||||
Sbjct: 233 gaaa 236
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgacttttta 51
||||||||| | ||||||||||||| ||| | |||||||||||
Sbjct: 1 gtactccctgcatttcaaaatgtttaacaccattgacttttta 43
>RF01058;MIR806;AP008215.1/9244991-9244779 39947:Oryza sativa
Japonica Group
Length = 213
Score = 216 bits (109), Expect = 1e-55
Identities = 173/191 (90%), Gaps = 5/191 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| | |||||||||||||||||||||||| ||||
Sbjct: 212 tactccctccgtttcgaaatatttgacaccattgactttttagcacatgtttgac-gttc 154
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||||||| | |||||||||||||||||| ||| || ||||| |||||||||||
Sbjct: 153 gtcttattcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatattt 94
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa--ttttttaataagac 185
||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 93 aacaatgaatcaaatgatatgaaaagaattaataattacttcaattttttttaataagac 34
Query: 186 gaatggtcaaa 196
||| |||||||
Sbjct: 33 gaacggtcaaa 23
Score = 56.0 bits (28), Expect = 3e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| | ||||||| || || |||||||||| ||||||||| ||||
Sbjct: 140 tttttgaataagacgaacg-tcaaacatgtgct-aaaaagtcaatggtgtcaaatatttc 197
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 198 gaaacggagggagtat 213
>RF01058;MIR806;AAAA02032598.1/5908-6144 39946:Oryza sativa Indica
Group
Length = 237
Score = 216 bits (109), Expect = 1e-55
Identities = 172/191 (90%), Gaps = 4/191 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 236 tactccctccgtttctgaatgtttgataccgttgactttttagcatatgtttgaccgttc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||||||| || || ||| ||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 176 gtcttattccaaaaattttatgaaatatgtaaaactatatgtatacatgaaagtatattt 117
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||||| || |||||||| |||| ||||||||||||||||| ||||||||||||||||
Sbjct: 116 aacaatggattaaatgata--aaaaaaataaataattacttaatttttttaataagacga 59
Query: 188 atggtcaaaca 198
|||||||||||
Sbjct: 58 atggtcaaaca 48
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||| ||||||||| | || |||||||||||||| ||||||||| ||||||
Sbjct: 169 aataagacgaacggtcaaacatatgct-aaaaagtcaacggtatcaaacattcagaaacg 227
Query: 238 gatggagtat 247
|| |||||||
Sbjct: 228 gagggagtat 237
Score = 48.1 bits (24), Expect = 6e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| |||||| |||| |||||| | ||||||||||| | |||||||||| |||
Sbjct: 2 tactcccttcgtttctaaatatttgacct-gttgacttttttaaatatgtttgaccattc 60
Query: 70 gtcttatt 77
||||||||
Sbjct: 61 gtcttatt 68
>RF01058;MIR806;AL731587.2/124021-123783 39947:Oryza sativa Japonica
Group
Length = 239
Score = 214 bits (108), Expect = 5e-55
Identities = 203/230 (88%), Gaps = 6/230 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| ||| |||| ||||| ||||||| ||||||||||||||||||| ||| ||||||
Sbjct: 238 tactctctctgttttaaaatatttgacaccgttgactttttagcacatatttaaccgttt 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| || ||||||||||||||||||||| ||||| || || |||||||
Sbjct: 178 gtcttattaaaaaaa--ttgtgaaatatgtaaaactatatgtgtatataaatgtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatacaaaaaaaataaataattacttaatttttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
||||||||||||||| | |||||||||||| |||||||||||||| ||||
Sbjct: 60 aatggtcaaacacgttc-taaaaagtcaacagtgtcaaacattttaaaac 12
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| |||| |||| ||||||||||||| ||||||||||||| || ||||||||| |||
Sbjct: 2 tacttcctctgttttaaaatgtttgacactgttgactttttagaacgtgtttgaccattc 61
Query: 70 gtcttattcaaacaaatt 87
|||||||||||| |||||
Sbjct: 62 gtcttattcaaaaaaatt 79
Score = 50.1 bits (25), Expect = 2e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| || ||| ||| | || || |||||||||||||||||||| |||||
Sbjct: 165 ttttttaataagacaaacggttaaatatgtgct-aaaaagtcaacggtgtcaaatatttt 223
Query: 232 gaaac 236
||||
Sbjct: 224 aaaac 228
>RF01058;MIR806;AAAA02013988.1/6415-6174 39946:Oryza sativa Indica
Group
Length = 242
Score = 214 bits (108), Expect = 5e-55
Identities = 171/191 (89%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||
Sbjct: 241 tactccctccgtttccaaatatttgacatcgttgacttttaagcatatgtttgaccgttc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||||||| || | ||||||||||||||||||| ||| | ||||| ||||||||||
Sbjct: 181 gtcttattcgaaaatttttgtgaaatatgtaaaactatatatatacatataaatatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||| |
Sbjct: 121 aacaatgaatcaaatgataggaaaagaattaataattacataaaatttttaataagacaa 62
Query: 188 atggtcaaaca 198
| |||||||||
Sbjct: 61 acggtcaaaca 51
Score = 61.9 bits (31), Expect = 4e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
||||||| ||||||||||| ||||||||| | ||||||| ||||||| ||||||| ||
Sbjct: 165 aaattttcgaataagacgaacggtcaaacatatgcttaaaa-gtcaacgatgtcaaatat 223
Query: 229 tttgaaacggatggagtat 247
|| |||||||| |||||||
Sbjct: 224 ttggaaacggagggagtat 242
>RF01058;MIR806;AP005647.3/116663-116903 39947:Oryza sativa Japonica
Group
Length = 241
Score = 214 bits (108), Expect = 5e-55
Identities = 200/226 (88%), Gaps = 6/226 (2%)
Strand = Plus / Minus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
|||| |||||| |||||||||||||| |||||||| |||||| |||||||||||| |||
Sbjct: 224 aaatatttgacgtcgttgactttttaaaacatgtttcaccgtttgtcttattcaaaaaaa 165
Query: 86 tttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatgaatcaaatg 143
|||||||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 164 tttgtgaaatatataaaactatatgtatacataaaaatatatttaacaatgaatcaaatg 105
Query: 144 atatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgta 202
||| | ||||||| |||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct: 104 atagggaaagaattaataattacttaaattttttgaataagacgaacggtcaaaca--tg 47
Query: 203 cttaaa-aagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||| ||||||||||||||||| |||| | ||||| |||||||
Sbjct: 46 cttaaagaagtcaacggtgtcaaatatttagggacggagggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||| | |||| ||||||| ||||||||| || |||||||||||||||
Sbjct: 2 tactccctccgtccctaaatatttgacaccgttgacttctttaagcatgtttgaccgttc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 214 bits (108), Expect = 5e-55
Identities = 208/234 (88%), Gaps = 8/234 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||| ||
Sbjct: 238 tactccctccgtttctaaatatttgacaccgttgactttttaagcacatgtttgaccttt 179
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
||||||||| ||| ||||| ||| |||||||||||||| |||| ||||||||||||||
Sbjct: 178 cgtcttatttaaa--aatttttgatatatgtaaaactatatgtatacatgaaaatatatt 121
Query: 127 taacaatgaatcaaatgatatgaaaagaata-aataattacttaaattttttaataagac 185
|||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 120 taacaatgaatcaaatgataggaaaaaaatataataattactt-aattttttaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
||||| ||||||| || | ||||||||||| | |||||| |||| ||||||||
Sbjct: 61 gaatgatcaaacatgt-ttaaaaaagtcaacagcgtcaaatatttagaaacgga 9
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||| ||
Sbjct: 161 aaatttttaaataagacgaaaggtcaaacatgtgcttaaaaagtcaacggtgtcaaatat 220
Query: 229 tttgaaacggatggagtat 247
|| |||||||| |||||||
Sbjct: 221 ttagaaacggagggagtat 239
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||| ||||||||||| |||| |||||| ||||||||||| |||||||||| | ||
Sbjct: 1 gtaccccctccgtttctaaatatttgacgctgttgacttttttaaacatgtttgatcatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
>RF01062;MIR812;AP005480.2/81366-81538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 212 bits (107), Expect = 2e-54
Identities = 150/162 (92%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||
Sbjct: 1 gactttttagcacatgtttgaccattcgtcttatttaaaaaaaattgtgaaatatgtaaa 60
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 61 actatatgtgtacatgaaaggttatttaacaatgaatcaaatgagatgaaaagaataaat 120
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaacacgt 201
||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 121 aattacttaaattttttgaataagacgaatggttaaacacgt 162
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 173 gactttttagcacgtgtttaaccattcgtcttattcaaa 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||| |||||||||||||||||||||
Sbjct: 41 tttttaaataagacgaatggtcaaaca 15
>RF01058;MIR806;AP003432.2/54591-54357 39947:Oryza sativa Japonica
Group
Length = 235
Score = 212 bits (107), Expect = 2e-54
Identities = 187/210 (89%), Gaps = 4/210 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||| ||||||||||||| |||| |||||| ||||||||||| || |||||||||||
Sbjct: 229 tccgttttaaaatgtttgacaccgttaacttttcagcacatgtttaactgttcgtcttat 170
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatg 134
| ||| |||||||| ||||||||||| |||| |||| ||||||| |||||||||||||
Sbjct: 169 taaaa-aaatttgtaaaatatgtaaatctatatgtatacatgaaagtatatttaacaata 111
Query: 135 aatcaaatgatatgaaaagaataaataattacttaa-attttttaataagacgaatggtc 193
||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 110 aattaaatgatatgaaaaaaataaataattacttaattttttttaataagacgaatggtt 51
Query: 194 aaacacgtacttaaaaagtcaacggtgtca 223
|||||||| |||||||||| ||| ||||||
Sbjct: 50 aaacacgtgcttaaaaagttaactgtgtca 21
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| || ||||| || || |||| || ||||||||||||||||||
Sbjct: 163 ttttttaataagacgaacagttaaacatgtgctgaaaa-gttaacggtgtcaaacatttt 221
Query: 232 gaaacggat 240
||||||||
Sbjct: 222 aaaacggat 230
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 212 bits (107), Expect = 2e-54
Identities = 165/182 (90%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||| |||| ||||||| |||||||||||||||| |||||||||| |||
Sbjct: 240 tactccatccgtttctaaatatttgacaccgttgactttttagcatatgtttgaccattc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||||||| | ||||| |||||||||||||||| || ||||| |||||||||||
Sbjct: 180 gtcttattcaaaaacttttgtaaaatatgtaaaactatacgtctacataaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaat-tttttaataagacg 186
|||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaaggaattaataattacttaaatgtttttaataagacg 61
Query: 187 aa 188
||
Sbjct: 60 aa 59
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||||||||||| | || |||||||||||||||||||| ||||
Sbjct: 167 tttttgaataagacgaatggtcaaacatatgct-aaaaagtcaacggtgtcaaatattta 225
Query: 232 gaaacggatggagta 246
|||||||||||||||
Sbjct: 226 gaaacggatggagta 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||| ||||||| ||||||||||| ||||| ||||||| |||||||||| ||||
Sbjct: 2 tactccccccgtttctaaatgtttgacgtcgttaactttttttaacatgtttgattgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AAAA02005403.1/7906-8143 39946:Oryza sativa Indica
Group
Length = 238
Score = 212 bits (107), Expect = 2e-54
Identities = 214/249 (85%), Gaps = 23/249 (9%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgaca--------tcgttgactttttagcacatgttt 61
|||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 237 tactccctccgtttcaaaatgtttaacactgttgacttgttgactttttagcacatgttt 178
Query: 62 gaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaat 121
||||||| ||||||| ||| ||||||| |||||||| |||||||||| |
Sbjct: 177 aaccgttcttcttatttaaaataatttgtaaaatatgt----------gtacatgaaagt 128
Query: 122 atatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt---a 178
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 127 atatttaacaatgaatcaaatgatat-aaaagaataaataattacttaaatttttttaga 69
Query: 179 ataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 68 ataagacgaatggtcaaacacgtaatt-aaaagccaacggtgtcaaacattttgaaacgg 10
Query: 239 atggagtat 247
| |||||||
Sbjct: 9 agggagtat 1
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| ||||| ||||| | || ||||||||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttggcttttaattacgtgtttgaccattc 61
Query: 70 gtcttattc 78
|||||||||
Sbjct: 62 gtcttattc 70
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 209 aagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||| |||| ||||||||||||||||| |||||||
Sbjct: 200 aagtcaacagtgttaaacattttgaaacggagggagtat 238
>RF01058;MIR806;AAAA02005830.1/14101-14346 39946:Oryza sativa Indica
Group
Length = 246
Score = 212 bits (107), Expect = 2e-54
Identities = 201/229 (87%), Gaps = 5/229 (2%)
Strand = Plus / Minus
Query: 22 ttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||||| ||| |||||||||||||| | |||||||||||||| |||||| |||
Sbjct: 227 ttcaaaatgtttaacaccgttgactttttagtatatgtttgaccgttcatcttat--aaa 170
Query: 82 caaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatca 139
|||||| |||||||| ||||||||| || ||||||||| |||||||||| ||||||||
Sbjct: 169 aaaatttatgaaatatataaaactatacgtatacatgaaagtatatttaaccatgaatca 110
Query: 140 aatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 109 aatgatatgaaaagaattaataattacttaaattttttaaataaaatgaatggtcaaacg 50
Query: 199 cgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||| |||| ||||| ||| ||||||||| ||||| | |||||||
Sbjct: 49 cgtacttcaaaaatcaacactgttaaacattttaaaacgaagggagtat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 168 taaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaaca 227
|||||||||| |||||| ||| ||||||||| |||| |||||||||||||||| |||||
Sbjct: 162 taaatttttttataagatgaacggtcaaacatatact-aaaaagtcaacggtgttaaaca 220
Query: 228 ttttgaa 234
|||||||
Sbjct: 221 ttttgaa 227
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 212 bits (107), Expect = 2e-54
Identities = 167/186 (89%), Gaps = 2/186 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||| |||| ||||||| ||||||||||||| || ||||||||||||||
Sbjct: 233 tactctctccgtttttaaatatttgacaccgttgactttttaacatatgtttgaccgttc 174
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||||||| || |||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 173 gtcttattcaaaaaattttgtgaaatatgtaaaattatatgtatacatgaaaatatattt 114
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||| |||||||||||| |||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 113 aacaataaatcaaatgatagaaaaaaaattaataattacttaatttttttaataagacga 54
Query: 188 atggtc 193
||||||
Sbjct: 53 atggtc 48
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 160 tttttgaataagacgaacggtcaaacatatg-ttaaaaagtcaacggtgtcaaatattta 218
Query: 232 gaaacgga 239
|||||||
Sbjct: 219 aaaacgga 226
>RF01058;MIR806;AACV01020567.1/776-1014 39947:Oryza sativa Japonica
Group
Length = 239
Score = 210 bits (106), Expect = 7e-54
Identities = 160/177 (90%), Gaps = 2/177 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 238 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|| ||||| ||| | |||||||||||||||||| ||| || ||||| |||||||||||
Sbjct: 178 gttttatttaaaaacttttgtgaaatatgtaaaagtatatgcctacataaaaatatattt 119
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataaga 184
|||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||
Sbjct: 118 aacaatgaatcatatgatagaaaaagaattaataattacttaaatttttgaataaga 62
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| ||| ||||| || || ||||||||||||||||||||||||||
Sbjct: 165 tttttaaataaaacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 223
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 224 gaaacggagggagtat 239
>RF01058;MIR806;AACV01025108.1/1606-1848 39947:Oryza sativa Japonica
Group
Length = 243
Score = 210 bits (106), Expect = 7e-54
Identities = 215/244 (88%), Gaps = 8/244 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttg-accgtt 68
|||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||| ||
Sbjct: 242 tactccctccgtttcaaaatgtttgacaccgtttcctttttagcacgtgttttcaccatt 183
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat---gtgtacatgaaaa-tata 124
||||||||| ||| || || |||||||||||||| |||| ||||||||||||| ||||
Sbjct: 182 cgtcttatttaaaaaatttggtgaaatatgtaaacctatatggtgtacatgaaaagtata 123
Query: 125 tttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataag 183
|||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 122 ttta-caatgaatccaatgatatgaaaagaataaataattacttaaattttttgaattag 64
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatgga 243
|| ||||||| ||||| | | |||||||||||||| ||||| ||||||||||||| |||
Sbjct: 63 accaatggtccaacacctgc-caaaaagtcaacggtttcaaatattttgaaacggaggga 5
Query: 244 gtat 247
||||
Sbjct: 4 gtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 69/77 (89%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaa-cacgtacttaaaaagtcaacggtgtcaaacattt 230
||||| ||||||||||||||| ||| ||||| || |||||| |||||||||||||||||
Sbjct: 168 tttttaaataagacgaatggtgaaaacacgtgct-aaaaaggaaacggtgtcaaacattt 226
Query: 231 tgaaacggatggagtat 247
||||||||| |||||||
Sbjct: 227 tgaaacggagggagtat 243
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||| | |||||||||||| ||| |||| |||| ||
Sbjct: 2 tactccctccgtttcaaaatatttgaaaccgttgactttttggcaggtgttggaccattg 61
Query: 70 gtcttattcaaa 81
|||| |||||||
Sbjct: 62 gtctaattcaaa 73
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 210 bits (106), Expect = 7e-54
Identities = 169/189 (89%), Gaps = 2/189 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||
Sbjct: 240 tactccctccgtttccaaatatttgacaccgttgactttttagcacatgtttgactgttt 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||| | ||| |||||| ||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 180 gtcttactaaaaaaaatttatgaaatatgtaaaactatatgtatacatataaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||| ||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 120 aaccatgaatcaaatgataggaaaataattaataattacttaatttttttaataagacga 61
Query: 188 atggtcaaa 196
| |||||||
Sbjct: 60 acggtcaaa 52
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||| |||||| || |||||||| || || |||||||||||||||||||| ||||
Sbjct: 167 ttttttagtaagacaaacagtcaaacatgtgct-aaaaagtcaacggtgtcaaatatttg 225
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 226 gaaacggagggagta 240
>RF01058;MIR806;AAAA02017322.1/13807-13568 39946:Oryza sativa Indica
Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 201/227 (88%), Gaps = 7/227 (3%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
|||||||| |||| ||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 232 tccgtttctaaatatttgacaccgttgattttttagcacatgtttgaccgttcatcttat 173
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatg 134
| || |||||||||||||||||||||| |||| |||||||||||||||||| |||
Sbjct: 172 t-aattttttttgtgaaatatgtaaaactatatgtatacatgaaaatatatttaactatg 114
Query: 135 aatcaaatgatatgaaaagaataaataattacttaa-attttttaataagacgaatggtc 193
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 113 aatcaaatgatatgaaaagaattaataattacttaattttttttaataagacgaatggtt 54
Query: 194 aaacacgtactta-aaaagtcaacggtgtcaaacattttgaaacgga 239
||||| || ||| ||||||||| ||||||||| |||| ||||||||
Sbjct: 53 aaacatgt--ttagaaaagtcaatggtgtcaaatatttagaaacgga 9
Score = 56.0 bits (28), Expect = 3e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 176 ttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
||||||||| ||| ||||||||| || || ||||| |||||||||||||| |||| ||||
Sbjct: 170 ttaataagatgaacggtcaaacatgtgctaaaaaa-tcaacggtgtcaaatatttagaaa 228
Query: 236 cgga 239
||||
Sbjct: 229 cgga 232
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
|||||||| |||| ||||||| | ||||||||| |||||||| ||| ||||||||||
Sbjct: 9 tccgtttctaaatatttgacaccattgacttttctaaacatgtttaaccattcgtcttat 68
Query: 77 tcaaacaaatt 87
| ||| |||||
Sbjct: 69 taaaaaaaatt 79
>RF01058;MIR806;AAAA02026273.1/286-45 39946:Oryza sativa Indica
Group
Length = 242
Score = 208 bits (105), Expect = 3e-53
Identities = 215/243 (88%), Gaps = 9/243 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||||||||||||| ||| || | ||||||||||| | |||||||| ||||||
Sbjct: 241 tactccctccgtttcaaaatattt-acgccattgactttttaagtacatgtttaaccgtt 183
Query: 69 cgtcttattcaaacaaatttgtga--aatatgtaaaactat--gtgtacatgaaaatata 124
||||||||| ||| || | || | ||||||||||||||| |||||||||||| ||||
Sbjct: 182 cgtcttattaaaa-aagtgtgaaattaatatgtaaaactatatgtgtacatgaaagtata 124
Query: 125 tttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattt-tttaataag 183
||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 123 tttaacaataaatcaaatgatatgaaaagaataaataattacttaaatttattgaataag 64
Query: 184 acgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatgga 243
|||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| |||
Sbjct: 63 acgaatggtcaaacacgt-gttaaaaagtcaacggtgtaaaacattttaaaagggaggga 5
Query: 244 gta 246
|||
Sbjct: 4 gta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||| ||||||||| ||| ||||||||||||| ||| ||||||||| |||
Sbjct: 2 tactccctcccttttaaaatgttttacaccgttgactttttaacacgtgtttgaccattc 61
Query: 70 gtcttattcaa 80
|||||||||||
Sbjct: 62 gtcttattcaa 72
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||| ||||| |||||||||||||||| || || ||| |||||
Sbjct: 168 ttttttaataagacgaacggttaaacatgtacttaaaaagtcaatggcgt-aaatatttt 226
Query: 232 gaaacggatggagtat 247
|||||||| |||||||
Sbjct: 227 gaaacggagggagtat 242
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 208 bits (105), Expect = 3e-53
Identities = 170/188 (90%), Gaps = 4/188 (2%)
Strand = Plus / Minus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||||| |||||||||||| ||||| ||||||||||||||||||||| || ||||
Sbjct: 235 ccctccgtttctaaatgtttgacaccgttggctttttagcacatgtttgaccatttgtct 176
Query: 74 tattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaaca 131
|||| ||| |||||||||||||||||||||| ||||| ||||||||| ||||||||| |
Sbjct: 175 tatt-aaaaaaatttgtgaaatatgtaaaactatatgtatacatgaaagtatatttaata 117
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaa-attttttaataagacgaatg 190
|||||| |||||||| | ||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 116 atgaattaaatgatagggaaagaattaataattacttaattttttttaataagacgaatg 57
Query: 191 gtcaaaca 198
||||||||
Sbjct: 56 gtcaaaca 49
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
|||||||||||||| |||||||||||| || || |||||| ||||||||||||||||||
Sbjct: 166 ttttttaataagacaaatggtcaaacatgtgct-aaaaagccaacggtgtcaaacattta 224
Query: 232 gaaacgga 239
||||||||
Sbjct: 225 gaaacgga 232
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa Indica
Group
Length = 240
Score = 206 bits (104), Expect = 1e-52
Identities = 212/242 (87%), Gaps = 7/242 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 240 gtactccctccatttcaaaatgtttgacaccgttgactttttagcacatatttgaacgtt 181
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
||||||||||||| | ||| | |||||||||||||||| || ||| ||||| ||||||
Sbjct: 180 cgtcttattcaaaaacttttataaaatatgtaaaactataagtatacgtgaaagtatatt 121
Query: 127 taacaatgaatcaaatgatatgaa-aagaataaataattacttaaattttttaataagac 185
||||||||||||||| |||| ||| || ||| ||||||||||||| ||||||||||||||
Sbjct: 120 taacaatgaatcaaacgataggaataataat-aataattacttaatttttttaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaa-gtcaacggtgtcaaacattttgaaacggatggag 244
|||||||||||| || ||||||| |||||| | |||||| |||| |||||||| ||||
Sbjct: 61 aaatggtcaaaca--tatttaaaaaggtcaacagcgtcaaatatttagaaacggagggag 4
Query: 245 ta 246
||
Sbjct: 3 ta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| | ||||| | || || ||||||||||||||||||||||||||
Sbjct: 166 tttttgaataagacgaacgttcaaatatgtgct-aaaaagtcaacggtgtcaaacatttt 224
Query: 232 gaaacggatggagta 246
|||| ||| ||||||
Sbjct: 225 gaaatggagggagta 239
>RF01058;MIR806;AC137620.2/65289-65525 39947:Oryza sativa Japonica
Group
Length = 237
Score = 206 bits (104), Expect = 1e-52
Identities = 174/195 (89%), Gaps = 3/195 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 tccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccgttcgtcttat 170
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatg 134
||||| | || ||||||||||||||| ||| || ||||| ||||||||||||||||||
Sbjct: 169 tcaaaaactttcgtgaaatatgtaaaattatatgcctacataaaaatatatttaacaatg 110
Query: 135 aatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtc 193
|||||||||||| ||||||||| ||||| || |||| |||||| ||||||||||| ||||
Sbjct: 109 aatcaaatgataggaaaagaattaataactatttaatttttttaaataagacgaacggtc 50
Query: 194 aaacacgtacttaaa 208
||||| |||||||||
Sbjct: 49 aaacatgtacttaaa 35
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||| ||||| || || |||||||||||||||| ||| |||||
Sbjct: 163 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgttaaatatttt 221
Query: 232 gaaacggatggagtat 247
||||||||| ||||||
Sbjct: 222 gaaacggatagagtat 237
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 acatgtttgaccgttcgtcttattcaaacaaatt 87
|||||||||||||||||||||||| ||| |||||
Sbjct: 42 acatgtttgaccgttcgtcttatttaaaaaaatt 75
>RF01058;MIR806;AAAA02000149.1/12442-12684 39946:Oryza sativa Indica
Group
Length = 243
Score = 206 bits (104), Expect = 1e-52
Identities = 161/179 (89%), Gaps = 2/179 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||| |||| |||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 242 tacttcctccctttctaaatatttgacaccgttgattttttagcacatgtttgaccgttc 183
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| | ||||||||||||||||||| ||||| ||||| || |||||||
Sbjct: 182 gtcttattcaaaaatttttgtgaaatatgtaaaactgtatgtatacatataagtatattt 123
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 122 aacaatgaatcaaataataggaaaagaattaataattacttaaattttttaataagacg 64
Score = 61.9 bits (31), Expect = 4e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| ||||||||||| ||||||||| || | |||||| |||||||||||||| ||
Sbjct: 166 aaatttttgaataagacgaacggtcaaacatgtgc-taaaaaatcaacggtgtcaaatat 224
Query: 229 tttgaaa 235
|| ||||
Sbjct: 225 ttagaaa 231
>RF01058;MIR806;DQ280666.1/5879-6118 39947:Oryza sativa Japonica
Group
Length = 240
Score = 206 bits (104), Expect = 1e-52
Identities = 170/191 (89%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| ||| || |||| |||| ||||||||||||||||||||||||||
Sbjct: 239 tactccctccgtttctgaatattcgacaccgttaactttttagcacatgtttgaccgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||| |||||| || ||| ||||||||||||||| ||||| ||||| || |||||||
Sbjct: 179 gtcttgttcaaaaaattttatgaaatatgtaaaactatatgtatacatataagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 119 aacaatgaatcaaatgataggaaaagaatttataattatttaatttttttaataagacga 60
Query: 188 atggtcaaaca 198
|||||||||||
Sbjct: 59 atggtcaaaca 49
>RF01058;MIR806;AAAA02035035.1/12905-13144 39946:Oryza sativa Indica
Group
Length = 240
Score = 204 bits (103), Expect = 4e-52
Identities = 211/241 (87%), Gaps = 7/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgtt 68
|||||||||||||| ||||| ||||||| |||| ||||||| || | || ||| | ||||
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttaactttttaagtatatatttaatcgtt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaa--ctatgtgtacatgaaaatatatt 126
||||||||| || ||| || | |||||| ||||| ||||||||||||||| ||||||
Sbjct: 179 cgtcttatt--aaaaaaattataaaatatataaaattatatgtgtacatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagac 185
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 taacaataaatcaaatgatatgaaaagaataaataattacttaaatttttttaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||| ||| |||||| ||||||||||||||| ||||| ||||||||| ||| |||||
Sbjct: 61 gaatggtaaaaaacgtac-taaaaagtcaacggtatcaaatattttgaaatggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| | | ||| | |||||||||||| |||||||||||| |||||
Sbjct: 165 ttttttaataagacgaacgattaaatatatacttaaaaagttaacggtgtcaaatatttt 224
Query: 232 gaaacggatggagta 246
||||||| ||||||
Sbjct: 225 aaaacggagggagta 239
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||| ||||| | |||||||||||||| || | ||| ||| ||
Sbjct: 1 gtactccctccatttcaaaatatttgataccgttgactttttagtacgttttttaccatt 60
Query: 69 cgtcttatt 77
|||||||||
Sbjct: 61 cgtcttatt 69
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 204 bits (103), Expect = 4e-52
Identities = 170/190 (89%), Gaps = 3/190 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| |||| |||||||| ||||| |||||||||||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttaccacatatttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||||||| | |||||| ||||||||||||||| || ||||| || |||||||
Sbjct: 180 gtcttattcaaaaatttttgtggaatatgtaaaactatacgtatacatataagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 120 aacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagaca 61
Query: 187 aatggtcaaa 196
||||||||||
Sbjct: 60 aatggtcaaa 51
Score = 60.0 bits (30), Expect = 2e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| ||||||||||| ||||||| | || |||||||| |||||||||||| ||
Sbjct: 164 aaatttttgaataagacgaacggtcaaatatgt-ggtaaaaagttaacggtgtcaaatat 222
Query: 229 tttgaaacggatggagta 246
|| |||||||| ||||||
Sbjct: 223 ttagaaacggagggagta 240
>RF01058;MIR806;AAAA02005385.1/2925-2694 39946:Oryza sativa Indica
Group
Length = 232
Score = 202 bits (102), Expect = 2e-51
Identities = 208/241 (86%), Gaps = 13/241 (5%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||| ||||||| | |||| ||| ||| ||||||||||||||||
Sbjct: 231 tactccctccgtttcaaaatatttgacaccattgattttctagtacatgtttgaccgttc 172
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
||| ||||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 171 ---------aaaaaaatttgtgaaatatgtaaaactatatatatacatgaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|| ||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||
Sbjct: 120 aataatgaatcaaatggtatgaaaagaataaataatttcttaacttttttgaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||| || |||||| ||| |||||||| |||||||||||||||||| ||| ||| ||||||
Sbjct: 60 aatagttaaacacatac-taaaaagttaacggtgtcaaacattttaaaatggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| ||| ||||||||||||| |||| ||||||||| | ||||| || |||
Sbjct: 2 tactccctccattttaaaatgtttgacaccgttaactttttagtatgtgtttaactattc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 52.0 bits (26), Expect = 4e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||| ||||| |||| |||| ||||||||| ||||||||||||| |||||||
Sbjct: 176 ggtcaaacatgtactagaaaa-tcaatggtgtcaaatattttgaaacggagggagtat 232
>RF01058;MIR806;AAAA02009185.1/29593-29833 39946:Oryza sativa Indica
Group
Length = 241
Score = 202 bits (102), Expect = 2e-51
Identities = 211/241 (87%), Gaps = 6/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| |||||| |||| ||||||| |||||||||||||||| | ||||||||||||
Sbjct: 240 tactcccttcgtttctaaatatttgacaccgttgactttttagcata-gtttgaccgttc 182
Query: 70 gtcttattcaaacaaat-ttgtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||| ||| ||| ||||||||||||||||||||| ||||| || ||| |||||
Sbjct: 181 gtcttattaaaaaaaaaattgtgaaatatgtaaaactatatgtgtatataaaagtatatc 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttt-taataagac 185
||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 121 gaacaatgaatcaaataatatgaaaaaaataaataattacttaaatttttagaataaaac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||| ||| | |||||| |||||||||||| ||||||||| ||| |||||
Sbjct: 61 aaatggtcaaacacatac-tgaaaagttaacggtgtcaaatattttgaaatggagggagt 3
Query: 246 a 246
|
Sbjct: 2 a 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| |||||||| | || |||||||||||||||||||| ||||
Sbjct: 168 ttttttaataagacgaacggtcaaacta-tgct-aaaaagtcaacggtgtcaaatattta 225
Query: 232 gaaacggatggagtat 247
|||||| | |||||||
Sbjct: 226 gaaacgaagggagtat 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||||||||| ||||||| |||| |||||| || | ||||||||| ||
Sbjct: 1 gtactccctccatttcaaaatatttgacaccgttaacttttcagtatgtgtttgaccatt 60
Query: 69 cgtcttattc 78
|| ||||||
Sbjct: 61 tgttttattc 70
>RF01058;MIR806;AAAA02030555.1/1290-1052 39946:Oryza sativa Indica
Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 170/189 (89%), Gaps = 4/189 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||| |||||||||||| ||||||||||||| ||| ||||||||||| |
Sbjct: 238 tactccctctatttctaaatgtttgacaccgttgacttttta-cacgtgtttgaccgt-c 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||| ||| ||||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 180 gtcttatttaaaaaaatttgtgaaatatgtaaaactatatgtatacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 120 aacaagaaatcaaatgataggaaaagaattaataattacttaatttttttaataagatga 61
Query: 188 atggtcaaa 196
|||||||||
Sbjct: 60 atggtcaaa 52
Score = 58.0 bits (29), Expect = 6e-08
Identities = 57/64 (89%), Gaps = 3/64 (4%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 167 tttttaaataagacgac-ggtcaaacacgtg--taaaaagtcaacggtgtcaaacattta 223
Query: 232 gaaa 235
||||
Sbjct: 224 gaaa 227
>RF01058;MIR806;AAAA02019059.1/8776-9013 39946:Oryza sativa Indica
Group
Length = 238
Score = 202 bits (102), Expect = 2e-51
Identities = 168/188 (89%), Gaps = 4/188 (2%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
|||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 234 tccctccgtttctaaatgtttgacaccgttgattttttagcacatgtttaaccgttcgtc 175
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaac 130
||||| ||| | ||||||||||||| |||||||| |||| ||||||| ||||||||||
Sbjct: 174 ttattaaaata--tttgtgaaatatggaaaactatatgtatacatgaaagtatatttaac 117
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatg 190
|| ||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 116 aacgaatcgaatgataggaaaagaattaataattacttaatttttttaataagacgaatc 57
Query: 191 gtcaaaca 198
|||||||
Sbjct: 56 atcaaaca 49
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||| ||||||||||||||| ||| ||||| || || ||||| |||||||||||||||||
Sbjct: 161 aaatattttaataagacgaacggttaaacatgtgctaaaaaa-tcaacggtgtcaaacat 219
Query: 229 tttgaaacgga 239
|| ||||||||
Sbjct: 220 ttagaaacgga 230
>RF01058;MIR806;AAAA02035408.1/5345-5101 39946:Oryza sativa Indica
Group
Length = 245
Score = 200 bits (101), Expect = 7e-51
Identities = 207/238 (86%), Gaps = 7/238 (2%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||||||||||||| | || ||||||| | |||||||| ||||||||||
Sbjct: 238 cctccgtttcaaaatgtttgacaccattaactttttgatatatgtttgatcgttcgtctt 179
Query: 75 attcaaacaaattt--gtgaaatatgtaaaactat--gtgtacatgaaaatatatttaac 130
|||||| ||| ||||||||||||||||||| ||||||| |||| ||||||||||
Sbjct: 178 tttcaaaattttttttgtgaaatatgtaaaactataggtgtacacgaaagtatatttaac 119
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaatt--ttttaataagacgaa 188
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 118 aataaatcaaatgatatgaaaagaataaataattacttaaattttttttaataagatgaa 59
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
| |||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 58 tagtcaaatccgtac-taaaaagtcaatagtgttaaatattttgaaacggatggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 206 aaaaagtcaacggtgtcaaacattttgaaacgga 239
||||||| || |||||||||||||||||||||||
Sbjct: 203 aaaaagttaatggtgtcaaacattttgaaacgga 236
>RF01058;MIR806;AAAA02013533.1/10091-9859 39946:Oryza sativa Indica
Group
Length = 233
Score = 200 bits (101), Expect = 7e-51
Identities = 206/239 (86%), Gaps = 14/239 (5%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
|||| ||||||||||||||||||| | ||||||||||||||||||||||||||| || |
Sbjct: 230 ctccatccgtttcaaaatgtttgataccgttgactttttagcacatgtttgaccatttat 171
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactatgt--gtacatgaaaatatatttaa 129
|||||| ||| |||| |||||||||||||| || | ||||| |||||||||
Sbjct: 170 cttattaaaaaaaat---------atgtaaaactatgtatgtccgtgaaagtatatttaa 120
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagacga 187
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||
Sbjct: 119 taatgaatcaaatgatatgaaaaaaataaataattacttaaatttttttaaataagatga 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
||||||||||| |||| ||||||||||| ||||||||||||||| ||| ||| ||||||
Sbjct: 59 atggtcaaacatgtac-taaaaagtcaatggtgtcaaacattttaaaatggagggagta 2
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||| |||||||||||| || || |||||||||||||| |||||||||||
Sbjct: 159 ttttttaataagataaatggtcaaacatgtgct-aaaaagtcaacggtatcaaacatttt 217
Query: 232 gaaacggatggag 244
|||||||||||||
Sbjct: 218 gaaacggatggag 230
Score = 87.7 bits (44), Expect = 7e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| ||| ||||||||||||| | |||||||||||| |||||||||||| ||
Sbjct: 1 gtactccctccattttaaaatgtttgacaccattgactttttagtacatgtttgaccatt 60
Query: 69 cgtcttattcaaacaaattt 88
| ||||||| ||| ||||||
Sbjct: 61 catcttatttaaaaaaattt 80
>RF01058;MIR806;AP008212.1/26338977-26339216 39947:Oryza sativa
Japonica Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 199/228 (87%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||| ||||||||| |||| | |||||||||||| ||| ||| ||||| ||
Sbjct: 235 cctccgtttcaaattgtttgacaccgttaattttttagcacatatttaaccattcgtttt 176
Query: 75 attcaaacaaatttgtgaaatatgtaaaactatgt--gtacatgaaaatatatttaacaa 132
||| ||| || ||| | |||||||||||||||| | |||||| ||| ||||||||| ||
Sbjct: 175 attaaaaaaattttataaaatatgtaaaactatatatgtacataaaagtatatttaataa 116
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatgg 191
|||||||||| |||| |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 115 tgaatcaaataatataaaaataataaataattacttaaattttttaaataagataaatgg 56
Query: 192 tcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||| ||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 55 tcaaacacatac-taaaaagtcaacggtatcaaatattttgaaacgga 9
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgacc 65
|||||| |||||||||||||| ||||| | |||||||||||||| | |||||||||
Sbjct: 1 gtactcactccgtttcaaaatatttgataccgttgactttttagtatgtgtttgacc 57
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||| ||||||||| ||| | || || ||||| | |||||||||||||| |||
Sbjct: 167 ttttttaataaaacgaatggttaaatatgtgctaaaaaatt-aacggtgtcaaacaattt 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 200 bits (101), Expect = 7e-51
Identities = 172/192 (89%), Gaps = 4/192 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||| |||
Sbjct: 239 tactccctccgtttctaaatatttgacaccgtcaactttttagcacatgtttgaccattc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|| ||||||||| | |||||||||||||||||||||| || ||||| || |||||||
Sbjct: 179 gttttattcaaa-atttttgtgaaatatgtaaaactatatgcatacatataagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatatgaaaagaattaataattacttaaattttttaaataagacg 61
Query: 187 aatggtcaaaca 198
|| ||| |||||
Sbjct: 60 aacggttaaaca 49
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| ||||| ||||||||||||||| || || ||||||| ||||||||||| |||| |
Sbjct: 167 ttttgaataaaacgaatggtcaaacatgtgct-aaaaagttgacggtgtcaaatatttag 225
Query: 233 aaacggatggagta 246
||||||| ||||||
Sbjct: 226 aaacggagggagta 239
>RF01062;MIR812;AP002537.2/60669-60502 39947:Oryza sativa Japonica
Group
Length = 168
Score = 198 bits (100), Expect = 3e-50
Identities = 148/161 (91%), Gaps = 6/161 (3%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||| ||||
Sbjct: 1 gactttttagcacatatttgaccgttcgtcttattaaaa-aaatttatgaaatatataaa 59
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 60 actatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaaaaataaat 119
Query: 161 aattacttaaattttttaataagacgaatggtcaaacacgt 201
|||||||| ||||| ||||||||||||||||||||||||
Sbjct: 120 aattactt---tttttaaataagacgaatggtcaaacacgt 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttatt 77
||||||||||||| ||||||||| |||||||||||
Sbjct: 168 gactttttagcacgtgtttgaccattcgtcttatt 134
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 198 bits (100), Expect = 3e-50
Identities = 205/235 (87%), Gaps = 5/235 (2%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
|||| |||||||||| ||| || ||||||||||||||||||||||| |||||| |||||
Sbjct: 234 cctctgtttcaaaatatttagcaccgttgactttttagcacatgtttaaccgtttgtctt 175
Query: 75 attcaaacaaatttgtgaaatatgtaaaa--ctatgtgtacatgaaaatatatttaacaa 132
||||||| | ||| | |||||||||||| ||| | ||||| ||||||||||||||||
Sbjct: 174 attcaaaaacttttataaaatatgtaaaattatatatctacataaaaatatatttaacaa 115
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacgaatgg 191
||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 114 cgaatcaaatgata-gaaaaaaattaataattacttaaatttttttaataagacgaacgg 56
Query: 192 tcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
| ||||| || | ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 55 ttaaacatgtgc-taaaaagtcaacggtatcaaacattttgaaacggagggagta 2
Score = 111 bits (56), Expect = 5e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AACV01022117.1/107-349 39947:Oryza sativa Japonica
Group
Length = 243
Score = 198 bits (100), Expect = 3e-50
Identities = 205/238 (86%), Gaps = 4/238 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
|||||||||||| |||| ||| || | |||||||||||||| ||||||||||||||||
Sbjct: 239 tccctccgtttctaaatatttaacgccattgactttttagcagatgtttgaccgttcgtt 180
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaac 130
||||||||| | ||||||||||||||||||| ||||| ||||| ||| ||||||||||
Sbjct: 179 ttattcaaaaacttttgtgaaatatgtaaaactatatgtatacataaaagtatatttaac 120
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaa--ttttttaataagacgaa 188
|||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||
Sbjct: 119 aatgaatcaaatgataggaaaagaactaatgattacttaaattttttttaataagacgaa 60
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||| ||||| | ||||||||||||| | |||||| |||| |||||| | ||||||
Sbjct: 59 tggttaaacatatttttaaaaagtcaacagcgtcaaatatttagaaacgcagggagta 2
>RF01058;MIR806;AACV01022578.1/12222-12463 39947:Oryza sativa
Japonica Group
Length = 242
Score = 198 bits (100), Expect = 3e-50
Identities = 180/202 (89%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 39 cgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatg 98
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 208 cgttgactttttaacacatatttgaccgttcgtcttattcaaaaaaatttgtgtaatatg 149
Query: 99 taaaac--tatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaat 156
|||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 148 taaaactatatgtatacatgaaagtatatttaacaatgaatcaaatgataagaaaaaaat 89
Query: 157 aaataattacttaaattttttaataagacgaatggtcaaacacgtactt-aaaaagtcaa 215
||||||||||| ||||||||||||||||||||| |||| | || || ||||||||||
Sbjct: 88 taataattactt-aattttttaataagacgaatgaccaaata--tatttaaaaaagtcaa 32
Query: 216 cggtgtcaaacattttgaaacg 237
||| |||||| |||| ||||||
Sbjct: 31 cggcgtcaaatatttagaaacg 10
>RF01058;MIR806;AACV01014584.1/9650-9429 39947:Oryza sativa Japonica
Group
Length = 222
Score = 198 bits (100), Expect = 3e-50
Identities = 197/227 (86%), Gaps = 18/227 (7%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 218 tccctccgtttcaaaatgtttaacatcattgactttttagcacatgtttgaccgttcgtt 159
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaacaa 132
||||| |||||| | | ||||||| ||||||||| |||||||||| |
Sbjct: 158 ttatt-----aaattttt----tttgtaaaa-------tacatgaaagtatatttaacga 115
Query: 133 tgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatgg 191
| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |
Sbjct: 114 taaatcaaatgatatgaaaataataaataattacttaaattttttgaataagacgaatag 55
Query: 192 tcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||| ||| ||||||||||||||||||||||||||| ||||||
Sbjct: 54 tcaaacacatac-taaaaagtcaacggtgtcaaacattttaaaacgg 9
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||| ||||||||||||| |||||||||||||| | |||||||| |||||||||||
Sbjct: 9 ccgttttaaaatgtttgacaccgttgactttttagtatgtgtttgactattcgtcttatt 68
Query: 78 caaa 81
||||
Sbjct: 69 caaa 72
Score = 58.0 bits (29), Expect = 6e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 175 tttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaa 234
|||||||| ||||| ||||||||| || || |||||||||| | ||| ||||||||||||
Sbjct: 151 tttaataaaacgaacggtcaaacatgtgct-aaaaagtcaatgatgttaaacattttgaa 209
Query: 235 acgga 239
|||||
Sbjct: 210 acgga 214
>RF01058;MIR806;AAAA02035816.1/5791-6029 39946:Oryza sativa Indica
Group
Length = 239
Score = 196 bits (99), Expect = 1e-49
Identities = 172/193 (89%), Gaps = 5/193 (2%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgt 67
|||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 239 gtactccctccgtttctaaatgtttgacaccgttgactttttaagcacatatttgaccgt 180
Query: 68 tcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaa--tatat 125
|||||||||| ||| || || |||||||||||||||||| |||| || ||| |||||
Sbjct: 179 tcgtcttattaaaaaaa--ttatgaaatatgtaaaactatatgtatatataaaagtatat 122
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagac 185
|||||||||||||||||| || ||||| ||| ||||||||||||| ||||||||||| ||
Sbjct: 121 ttaacaatgaatcaaatggtaggaaaataattaataattacttaatttttttaataaaac 62
Query: 186 gaatggtcaaaca 198
|||||||||||||
Sbjct: 61 gaatggtcaaaca 49
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||| | || ||||||||||||||||||||||||||||
Sbjct: 164 ttttttaataagacgaacggtcaaatatgtgcttaaaaagtcaacggtgtcaaacattta 223
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 224 gaaacggagggagta 238
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 196 bits (99), Expect = 1e-49
Identities = 169/190 (88%), Gaps = 3/190 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 236 tactccctccgtttctaaatgtttgacaccgttaactttttagcatatgtttgaccgttc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|| ||||| ||| ||||||||||| |||||||||| | || ||||||| |||||||
Sbjct: 176 gtattattaaaatttttttgtgaaataagtaaaactatatatatacatgaaagtatattt 117
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||
Sbjct: 116 aataatgaatcaaatgatatgaaaagaattaataattacttaacttttttgaataaaacg 57
Query: 187 aatggtcaaa 196
||||||||||
Sbjct: 56 aatggtcaaa 47
Score = 67.9 bits (34), Expect = 7e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 174 ttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttga 233
||||||||| ||||| ||||||||| | || ||||||| ||||||||||||||||| ||
Sbjct: 165 ttttaataatacgaacggtcaaacatatgct-aaaaagttaacggtgtcaaacatttaga 223
Query: 234 aacggatggagtat 247
|||||| |||||||
Sbjct: 224 aacggagggagtat 237
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 194 bits (98), Expect = 4e-49
Identities = 196/225 (87%), Gaps = 4/225 (1%)
Strand = Plus / Minus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||||| |||| ||| | | ||||||| |||||||||||||||||||||||||||
Sbjct: 236 ccctccgtttctaaatatttaataccgttgacattttagcacatgtttgaccgttcgtct 177
Query: 74 tattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaaca 131
|||||||| | |||||||||||||||||||||| || ||||| || ||||||||| |
Sbjct: 176 tattcaaaaacttttgtgaaatatgtaaaactatacgtatacatataagtatatttaata 117
Query: 132 atgaatcaaatgatatgaaaagaataaataattactt-aaattttttaataagacgaatg 190
||||||||||||||| ||||| ||| ||||||||||| |||||||| ||||||||||| |
Sbjct: 116 atgaatcaaatgataggaaaataattaataattacttaaaatttttaaataagacgaacg 57
Query: 191 gtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|||||||| | ||||||||||||||| |||||| |||| ||||
Sbjct: 56 gtcaaacatat-tttaaaaagtcaacggcgtcaaatatttagaaa 13
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||| |||| |||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 13 tttctaaatatttgacgccgttgactttttaaaatatgtttgaccgttcgtcttatt 69
Score = 48.1 bits (24), Expect = 6e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || | ||||| ||||||||| | ||| ||||
Sbjct: 167 tttttgaataagacgaacggtcaaacatgtgc-taaaatgtcaacggtattaaatattta 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
>RF01058;MIR806;AAAA02002143.1/37318-37554 39946:Oryza sativa Indica
Group
Length = 237
Score = 194 bits (98), Expect = 4e-49
Identities = 201/232 (86%), Gaps = 5/232 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| |||||| |||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 236 tactcccttcgtttctaaatgtttgacaccgttaactttttagcacatgtttgagcgttc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||| ||| || | | ||||||||||||||||| |||| ||||||| |||||||
Sbjct: 176 gtcttattaaaaaaact--gcgaaatatgtaaaactatatgtatacatgaaagtatattt 119
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|| ||| |||||| ||||| ||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 118 aataataaatcaattgataggaaaagaattaataattacttattttttttaataagatga 59
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| |||||||| || | ||||||||||||| |||||| |||| ||||||||
Sbjct: 58 atagtcaaacatgt-ttaaaaaagtcaacggcgtcaaatatttagaaacgga 8
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| | ||||||| || || ||||||| |||||||||||||||||
Sbjct: 163 ttttttaataagacgaacgctcaaacatgtgct-aaaaagttaacggtgtcaaacattta 221
Query: 232 gaaacggatggagtat 247
|||||| | |||||||
Sbjct: 222 gaaacgaagggagtat 237
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||||| |||| |||||| |||||||||||| ||||||||||| ||| |||
Sbjct: 5 ccctccgtttctaaatatttgacgccgttgacttttttaaacatgtttgactattcatct 64
Query: 74 tattcaaacaaat 86
|||| ||| ||||
Sbjct: 65 tattaaaaaaaat 77
>RF01058;MIR806;AP003683.3/85964-85726 39947:Oryza sativa Japonica
Group
Length = 239
Score = 194 bits (98), Expect = 4e-49
Identities = 190/217 (87%), Gaps = 4/217 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
||||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||||
Sbjct: 232 ctccgtttctaaatatttgacaccgttgactttttagcacatgtttgcacattcgtctta 173
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaacaatga 135
|||||| | |||||||||||| ||||||||| |||| || || |||||||||||||||
Sbjct: 172 ttcaaaaacttttgtgaaatatataaaactatatgtatatataagtatatttaacaatga 113
Query: 136 atcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacgaatggtca 194
||||||||||| ||| | ||| |||||||||||||||| ||||||||||| |||||||||
Sbjct: 112 atcaaatgataggaatataattaataattacttaaatttttttaataagatgaatggtca 53
Query: 195 aacacgtactt-aaaaagtcaacggtgtcaaacattt 230
|||| || || ||||||||||||| |||||| ||||
Sbjct: 52 aaca--tatttaaaaaagtcaacggcgtcaaatattt 18
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||| |||||| || || |||||||||||||||||||| ||||
Sbjct: 165 tttttgaataagacgaatgtgcaaacatgtgct-aaaaagtcaacggtgtcaaatattta 223
Query: 232 gaaacgga 239
||||||||
Sbjct: 224 gaaacgga 231
>RF01058;MIR806;AP003243.3/61784-62019 39947:Oryza sativa Japonica
Group
Length = 236
Score = 194 bits (98), Expect = 4e-49
Identities = 204/237 (86%), Gaps = 8/237 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||||||||||| ||||| |||||| ||||||||||| | |||
Sbjct: 235 tactccctccgtttctaaatgtttgacactgttgattttttaccacatgtttgatcattc 176
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| || ||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 175 gtcttattcaaaaaattttgtgaaatatgtaaaactatatgtatacatgaaagtatattt 116
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||||||||||||| || ||||| ||| ||||||| | ||||||||||||||||
Sbjct: 115 aacaatgaatcaaatggtaggaaaataattaataatt-----atttttttaataagacga 61
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
||||||||||| | |||||||| |||||||||||| ||| |||||||| ||||
Sbjct: 60 atggtcaaacatat-tttaaaaagataacggtgtcaaatattaagaaacggagggag 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||| ||||||| || | ||||| ||||| |||||||||||||
Sbjct: 162 tttttgaataagacgaatgatcaaacatgtggtaaaaaa-tcaacagtgtcaaacattta 220
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 221 gaaacggagggagta 235
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
||||||||||||| ||| ||||||| |||| ||||||| | |||||||||| |||||
Sbjct: 5 ctccctccgtttcttaatatttgacaccgttatctttttaaaatatgtttgaccattcgt 64
Query: 72 cttatt 77
||||||
Sbjct: 65 cttatt 70
>RF01058;MIR806;AACV01011934.1/13088-12853 39947:Oryza sativa
Japonica Group
Length = 236
Score = 194 bits (98), Expect = 4e-49
Identities = 208/240 (86%), Gaps = 11/240 (4%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||| ||||| ||| ||| |||| |||||||||||||||| ||||| |||| |||
Sbjct: 235 tactccatccgtctcagaatatttggcatcgttgactttttaagcacaggtttacatgtt 176
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatatt 126
||||||||| ||| || ||| |||||||| ||||| || ||||||||| ||| ||||||
Sbjct: 175 cgtcttattaaaaaaattttatgaaatatataaaattacatgtgtacataaaagtatatt 116
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 115 taacaatgaat------atatgaaaataataaataattacttaaattttttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 61 gaatggtcaaacacgtact-aaaaagtcaatggtgtcaaacattttgaaacggagggagt 3
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 11 actccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcg 70
||||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||||
Sbjct: 3 actccctccgtttcaaaatgtttgacaccattgactttttagtacgtgtttgaccattcg 62
Query: 71 tcttattcaaa 81
|||||||||||
Sbjct: 63 tcttattcaaa 73
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 203 cttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||| || |||| ||| ||| |||||||||||||
Sbjct: 192 cttaaaaagtcaacgatgccaaatattctgagacggatggagtat 236
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 194 bits (98), Expect = 4e-49
Identities = 169/189 (89%), Gaps = 4/189 (2%)
Strand = Plus / Minus
Query: 54 acatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--t 111
|||||||| ||||||||||| ||||||| | ||||| |||||||||||| ||| || |
Sbjct: 190 acatgtttaaccgttcgtctcattcaaaaacttttgttaaatatgtaaaattatatgcct 131
Query: 112 acatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataattactt-aa 170
|||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||
Sbjct: 130 acataaaaatatatttaacaatgaatcaaatgataggaaaagaattaataactacttaaa 71
Query: 171 attttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
|||||| ||||||||||| ||||||||| || | ||||||||||||||||||||||||||
Sbjct: 70 atttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacggtgtcaaacattt 12
Query: 231 tgaaacgga 239
|||||||||
Sbjct: 11 tgaaacgga 3
Score = 125 bits (63), Expect = 3e-28
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtctt 60
Query: 75 attcaaa 81
|||||||
Sbjct: 61 attcaaa 67
>RF01058;MIR806;AC111015.2/40203-40442 39947:Oryza sativa Japonica
Group
Length = 240
Score = 194 bits (98), Expect = 4e-49
Identities = 198/229 (86%), Gaps = 3/229 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
|||||||||||| |||||||||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttagtatatgtttgatcgttcgtc 177
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaac 130
||||||||| ||| ||||||||||| |||||| ||||| ||||| ||| ||||||||||
Sbjct: 176 ttattcaaaaaaaattgtgaaatatataaaactatatgtatacataaaagtatatttaac 117
Query: 131 aatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatg 190
||||| |||||||||| ||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 116 aatgattcaaatgataggaaaatcattaataattacttattttttttaataagatgaatg 57
Query: 191 gtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||| || | ||||| | ||||| |||||| |||| ||||||||
Sbjct: 56 gttaaacatgt-ttaaaaaatttaacggcgtcaaatatttagaaacgga 9
Score = 71.9 bits (36), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| | ||||||| |||| |||||||||||||||||||||||||
Sbjct: 166 tttttgaataagacgaacgatcaaacatatact-aaaaagtcaacggtgtcaaacattta 224
Query: 232 gaaacgga 239
||||||||
Sbjct: 225 gaaacgga 232
>RF01062;MIR812;AACV01000759.1/1650-1823 39947:Oryza sativa Japonica
Group
Length = 174
Score = 192 bits (97), Expect = 2e-48
Identities = 147/160 (91%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaattt-gtgaaatatgtaa 101
||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||
Sbjct: 1 gactttttagcacatgtttaaccgttcgtcttattcaaaaaaattttgtgaaatatgtaa 60
Query: 102 aactatgtg--tacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaa 159
|| ||| || ||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 61 aattatatgcctacataaaaatatatttaacaatgaatcaaatgataggaaaagaattaa 120
Query: 160 taattacttaaatttttt-aataagacgaatggtcaaaca 198
|||||||||||||||||| |||||||| || |||||||||
Sbjct: 121 taattacttaaattttttgaataagacaaacggtcaaaca 160
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 54 acatgtttgaccgttcgtcttattcaaa 81
||||||||||||||| ||||||||||||
Sbjct: 163 acatgtttgaccgtttgtcttattcaaa 136
>RF01058;MIR806;AP008214.1/2109258-2109019 39947:Oryza sativa
Japonica Group
Length = 240
Score = 192 bits (97), Expect = 2e-48
Identities = 209/242 (86%), Gaps = 7/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttt--agcacatgtttgaccgt 67
||||||||||||||| ||| |||||||| |||||| ||||| || |||||||| |||||
Sbjct: 239 tactccctccgtttctaaacgtttgacaccgttgatttttttaagtacatgtttaaccgt 180
Query: 68 tcgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtaca--tgaaaatatat 125
|||||||||| ||| ||||| |||||||| ||||||||| |||| | ||||| |||||
Sbjct: 179 tcgtcttatttaaaaaaatta-tgaaatatataaaactatatgtataaatgaaagtatat 121
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagac 185
||||||||||||||||||||| ||||||||| |||||||| |||| ||||| ||||||||
Sbjct: 120 ttaacaatgaatcaaatgataggaaaagaattaataattatttaattttttgaataagac 61
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||||||||||||| || || |||||| || ||||| ||| |||| ||||||||| ||||
Sbjct: 60 gaatggtcaaacatgt--tttaaaagttaatggtgttaaatatttagaaacggatagagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaag-tcaacggtgtcaaacattt 230
||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||||| |||
Sbjct: 164 tttttaaataagacgaacggttaaacatgtacttaaaaaaatcaacggtgtcaaacgttt 223
Query: 231 tgaaacggatggagta 246
|||||||| ||||||
Sbjct: 224 agaaacggagggagta 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgaccgttcgtcttattcaaa 81
|||||||||||| |||||||||||||||
Sbjct: 45 acatgtttgaccattcgtcttattcaaa 72
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa Indica
Group
Length = 238
Score = 192 bits (97), Expect = 2e-48
Identities = 208/240 (86%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| || |||||| |||| |||||| |||||||||||||||||| |||||||| |||
Sbjct: 237 tactcgcttcgtttctaaatatttgaccccgttgactttttagcacaagtttgaccattc 178
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 177 gtcttattcaaa-aattttgtgaaatatgtaaaactatatgtatacatgaaaatatattt 119
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
||||||||||||||||||| |||| |||| |||||||| || ||||||||||||||| |
Sbjct: 118 aacaatgaatcaaatgataggaaaggaattaataatta-tttaattttttaataagataa 60
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|| |||||||| || | ||||| ||||||| || ||| |||| || ||||| |||||||
Sbjct: 59 atagtcaaacatgt-ttaaaaaaatcaacggcgttaaatatttagatacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
|||||||| |||||||||||||||||||| || | |||||||||||||| |||||| ||
Sbjct: 161 aaatttttgaataagacgaatggtcaaacttgtgc-taaaaagtcaacggggtcaaatat 219
Query: 229 tttgaaacg 237
|| ||||||
Sbjct: 220 ttagaaacg 228
>RF01058;MIR806;AAAA02028059.1/772-1013 39946:Oryza sativa Indica
Group
Length = 242
Score = 192 bits (97), Expect = 2e-48
Identities = 202/231 (87%), Gaps = 7/231 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
||||| ||||||||| |||||||| ||| ||||||||||||| | | |||||||||||||
Sbjct: 241 tactctctccgtttcgaaatgtttaacaccgttgactttttaagtaaatgtttgaccgtt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatt 126
||| ||||||||| | |||||||||||||||||| ||| || ||||| ||||||||||
Sbjct: 181 cgttttattcaaaaacttttgtgaaatatgtaaaattatatgcttacataaaaatatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||
Sbjct: 121 taacaatgaatcaaatgataagaaaagatgtaataattacttaaattttttaaataaaac 62
Query: 186 gaatggtcaaacacgtactta-aaaagtcaacggtgtcaaacattttgaaa 235
||||||||||||| || ||| |||||||||||| |||||| |||| ||||
Sbjct: 61 gaatggtcaaacatgt--ttacaaaagtcaacggcgtcaaatatttcgaaa 13
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 167 tttttgaataaaacgaacggtcaaacatttacttaaaaagtcaacggtgttaaacatttc 226
Query: 232 gaaacgga 239
||||||||
Sbjct: 227 gaaacgga 234
>RF01058;MIR806;AC105319.2/92146-92389 39947:Oryza sativa Japonica
Group
Length = 244
Score = 192 bits (97), Expect = 2e-48
Identities = 197/229 (86%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
||||||| |||| |||| ||| ||| |||||| ||||||||||| |||||| | |||||
Sbjct: 237 ctccctcaatttcgaaatatttaacaccgttgattttttagcacacgtttgatcattcgt 178
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaaca 131
|||||||||| | ||| | |||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 177 cttattcaaaaacttttataaaatatgtaaaattatgtctacataaaaatatatttaaca 118
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacgaatg 190
||||||||||||||| |||||||| |||||||||||||||| |||||||||||| || |
Sbjct: 117 atgaatcaaatgatagaaaaagaattaataattacttaaatttttttaataagacaaacg 58
Query: 191 gtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||| | ||||||||||||||| |||| ||||||||||||||
Sbjct: 57 gttaaacatatgcttaaaaagtcaacgtcttcaagcattttgaaacgga 9
Score = 60.0 bits (30), Expect = 2e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgt 71
|||||||||||||||||| |||| |||||||||||| |||| |||||| |||||| ||
Sbjct: 5 tccctccgtttcaaaatgcttgaagacgttgactttttaagcatatgtttaaccgtttgt 64
Query: 72 cttatt 77
||||||
Sbjct: 65 cttatt 70
>RF01062;MIR812;AACV01009485.1/6761-6934 39947:Oryza sativa Japonica
Group
Length = 174
Score = 190 bits (96), Expect = 7e-48
Identities = 155/170 (91%), Gaps = 6/170 (3%)
Strand = Plus / Plus
Query: 45 ctttttagcacatgtttgaccgttcgtcttattcaaacaaa-tttgtgaaatatgtaaaa 103
||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||
Sbjct: 3 ctttttagcacatgtttgaccgttcgtcttattcaaaaaaaatttgtgaaat-tgtaaag 61
Query: 104 ctat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaata 161
|||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 ctatatgtgtacatgaaagtatatttaataatgaatcaaatgatatgaaaagaataaata 121
Query: 162 attacttaaatttttt--aataagacgaatggtcaaacacgtacttaaaa 209
||| ||| |||||||| |||||||||||||||||| || ||||| ||||
Sbjct: 122 attgctttaatttttttgaataagacgaatggtcaagcatgtactaaaaa 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatt 87
|||||||||| ||||| |||||| ||||||||||||||| |||||
Sbjct: 174 gactttttagtacatgcttgaccattcgtcttattcaaaaaaatt 130
>RF01062;MIR812;AAAA02000693.1/35465-35637 39946:Oryza sativa Indica
Group
Length = 173
Score = 190 bits (96), Expect = 7e-48
Identities = 145/159 (91%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||| ||||||||| ||||| ||||| ||| ||||||||||||||| ||||
Sbjct: 1 gactttttagcacgtgtttgaccattcgttttattaaaaaaaatttgtgaaatatataaa 60
Query: 103 actat--gtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 61 actatatgtgtacatgaaagtatatttaacaatgaatcagatgatataaaaggaataaat 120
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaaca 198
||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 aattacttaaattttttgaataagacaaatggtcaaaca 159
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||||||||||||||| || ||||||||||||
Sbjct: 173 gactttttagcacatgtttgaccatttgtcttattcaaa 135
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaacacgt 201
||||||||||| ||||||||||||||||||
Sbjct: 41 ttttttaataaaacgaatggtcaaacacgt 12
>RF01062;MIR812;AP008218.1/26265074-26264902 39947:Oryza sativa
Japonica Group
Length = 173
Score = 190 bits (96), Expect = 7e-48
Identities = 145/159 (91%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||
Sbjct: 1 gactttttagcacatgtttgatcgttcgtcttattcaaaaaattttgtgagatatgtaaa 60
Query: 103 actatgtg--tacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
| ||| || ||||| |||||||||||||||| ||||||||||||| ||||||||| |||
Sbjct: 61 attatatgcctacataaaaatatatttaacaacgaatcaaatgataggaaaagaattaat 120
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaaca 198
||||||||||||||||| |||||| ||||||||||||||
Sbjct: 121 aattacttaaattttttgaataaggcgaatggtcaaaca 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 173 gactttttatcacatgtttgaccattcgccttattcaaa 135
>RF01058;MIR806;AC210447.1/112690-112455 4538:Oryza glaberrima
(African rice)
Length = 236
Score = 190 bits (96), Expect = 7e-48
Identities = 195/223 (87%), Gaps = 5/223 (2%)
Strand = Plus / Minus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 230 tttcaaaatgtttaacaccgttgactttttagcacatgtttgatcattcgtcttattcaa 171
Query: 81 acaaatttg-tgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatgaat 137
| || ||| |||||||||||||| ||| || ||||| |||||||||||||||||||||
Sbjct: 170 aaaacttttatgaaatatgtaaaattatatgcctacataaaaatatatttaacaatgaat 111
Query: 138 caaatgatatgaaaagaataaataattacttaaatt-ttttaataagacgaatggtcaaa 196
||||||||| ||||| ||| |||||||||||||||| |||||||||||| || ||| |||
Sbjct: 110 caaatgataggaaaataattaataattacttaaatttttttaataagacaaacggtaaaa 51
Query: 197 cacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
| || | |||||||| ||||| ||||| |||||||||||||
Sbjct: 50 tatgtgc-taaaaagttaacggcctcaaatattttgaaacgga 9
Score = 71.9 bits (36), Expect = 4e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||| ||||||| || || |||||||||||||||| |||||||||
Sbjct: 168 tttttgaataagacgaatgatcaaacatgtgct-aaaaagtcaacggtgttaaacatttt 226
Query: 232 gaaa 235
||||
Sbjct: 227 gaaa 230
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||||||||| ||||| |||| |||||||||||||| ||| ||||||
Sbjct: 2 tactcgctccgtttcaaaatatttgaggccgttaactttttagcacatattttaccgttt 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AAAA02009498.1/6852-7093 39946:Oryza sativa Indica
Group
Length = 242
Score = 190 bits (96), Expect = 7e-48
Identities = 210/242 (86%), Gaps = 7/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgtt 68
|||||||||| ||| |||||||||||| |||||| |||||| ||| |||||||||||||
Sbjct: 241 tactccctccattttgaaatgtttgacaccgttgattttttaagcatatgtttgaccgtt 182
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatt 126
|||||||||| || | ||| | |||||||||||| ||| || ||||| ||||||||||
Sbjct: 181 cgtcttattcgaaaatttttataaaatatgtaaaattatatgcctacataaaaatatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
|||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 121 taacaatgaatcaaatgataagaaaagaattaataattacttaaattttttgaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaa-gtcaacggtgtcaaacattttgaaacggatggag 244
||| ||||||| | || ||||||| || || || ||||||||||| |||||||| ||||
Sbjct: 61 gaacggtcaaatatgt--ttaaaaatgttaatggcgtcaaacatttcgaaacggagggag 4
Query: 245 ta 246
||
Sbjct: 3 ta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 169 aaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacat 228
||||||| ||||||||||| ||||||||| | |||||||| |||||||||||||||||
Sbjct: 164 aaattttcgaataagacgaacggtcaaacatatgcttaaaaaatcaacggtgtcaaacat 223
Query: 229 tttgaaacggatggagtat 247
|| ||| ||| |||||||
Sbjct: 224 ttcaaaatggagggagtat 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| ||||||||||| | || || |||| |||| |||||||||||
Sbjct: 2 tactccctccgtttcgaaatgtttgacgccattaacatttttaaacatatttgaccgttc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
>RF01058;MIR806;AAAA02027758.1/1941-1701 39946:Oryza sativa Indica
Group
Length = 241
Score = 190 bits (96), Expect = 7e-48
Identities = 194/223 (86%), Gaps = 4/223 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||
Sbjct: 233 tccgtttcaaaatgtttgacaccattgattttttagcacatgtttgaccgttcgtcttat 174
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatg 134
| ||| | ||| |||||||||||||| ||| || |||| ||||||||||||||||||
Sbjct: 173 t-aaaaacttttatgaaatatgtaaaattatatgcctacacaaaaatatatttaacaatg 115
Query: 135 aatcaaatgatatgaaaagaataaataattacttaaat-tttttaataagacgaatggtc 193
||||||||| || ||||||||| ||||| ||||||||| |||| ||||| | ||| ||||
Sbjct: 114 aatcaaatggtaggaaaagaattaataactacttaaatattttgaataatatgaacggtc 55
Query: 194 aaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
||||| ||||||||| ||||||| | |||||| ||||| ||||
Sbjct: 54 aaacatgtacttaaagagtcaacagcgtcaaatattttaaaac 12
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||||||||||||||| ||||||||| || || ||||| |||| ||||||||||||||||
Sbjct: 168 tttttaataagacgaacggtcaaacatgtgctaaaaaa-tcaatggtgtcaaacattttg 226
Query: 233 aaacggatgga 243
|||||||||||
Sbjct: 227 aaacggatgga 237
>RF01058;MIR806;AP008210.1/35216340-35216121 39947:Oryza sativa
Japonica Group
Length = 220
Score = 190 bits (96), Expect = 7e-48
Identities = 192/220 (87%), Gaps = 8/220 (3%)
Strand = Plus / Minus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||||| ||||| |||||| ||||| || ||||||||| |||||||||| ||||
Sbjct: 220 ccgtttcaaaatatttgatatcgttaactttataacacatgtttaaccgttcgtcgtatt 161
Query: 78 caaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatga 135
||| |||| || |||||| ||||| ||| |||||||| ||| ||||||||||||| |
Sbjct: 160 aaaaaaaatatg--aaatatctaaaattatatgtgtacataaaagtatatttaacaataa 103
Query: 136 atcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtca 194
|||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 102 atcaaatgatatgaaaagaataaata---agttaaattttttgaataagacgaatggtca 46
Query: 195 aacacgtacttaaaaagtcaacggtgtcaaacattttgaa 234
|| ||||||||| |||||||||| | ||||||||||||||
Sbjct: 45 aatacgtacttacaaagtcaacgatatcaaacattttgaa 6
Score = 58.0 bits (29), Expect = 6e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 22 ttcaaaatgtttgacatcgttgacttt-ttagcacatgtttgaccgttcgtcttattcaa 80
|||||||||||||| |||||||||||| | || || | ||||||| ||||||||||||||
Sbjct: 6 ttcaaaatgtttgatatcgttgactttgtaagtacgtatttgaccattcgtcttattcaa 65
Query: 81 a 81
|
Sbjct: 66 a 66
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 190 bits (96), Expect = 7e-48
Identities = 163/183 (89%), Gaps = 3/183 (1%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctta 75
||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 233 ctccgtttctaaatatttgacaccattgactttttagcacatgtttgaccgttcgtcttt 174
Query: 76 ttcaaacaaatttgtgaaatatgtaaaactatgtgt--acatgaaaatatatttaacaat 133
|| ||| |||||||||||| ||||||||| ||| |||| ||||||||| |||||||
Sbjct: 173 tttaaaagcttttgtgaaatatataaaactatatgtctacataaaaatatatataacaat 114
Query: 134 gaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggt 192
||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 113 gaatcaaatgataggaaaaaaattaataattacttaaattttttgaataagacgaatggt 54
Query: 193 caa 195
|||
Sbjct: 53 caa 51
Score = 54.0 bits (27), Expect = 1e-06
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 181 aagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|||||||| ||||||||| || || |||||||||| ||||||||| |||| ||||||||
Sbjct: 175 aagacgaacggtcaaacatgtgct-aaaaagtcaatggtgtcaaatatttagaaacgga 232
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||| | |||||||||| ||||| |||||| |||
Sbjct: 2 tactccctccgtttctaaatatttgatgt-gttgacttttctaaacatgattgaccattc 60
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 61 gtcttattcaaa 72
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 190 bits (96), Expect = 7e-48
Identities = 203/234 (86%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||||
Sbjct: 240 tactccctccgtttctaaatatttgacgccgttgactttttagcacatgtttaaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||||||| || | |||| ||||||| |||||| ||||| ||||| || ||| |||
Sbjct: 180 gtcttattccaaaacttttgcgaaatatataaaactatatgtatacatataagtattttt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacg 186
||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||
Sbjct: 120 aacaatgaatcaaatgatagaaaaaaaattaataattacttaaatttttttaataagacg 61
Query: 187 aatggtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||||||| || || |||||||||||| |||||| |||||||||||||
Sbjct: 60 aacggtcaaaca--tatttaaaaaagtcaacgacgtcaaatattttgaaacgga 9
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||| ||||||||||||||| |||||| ||||||||||||| | ||||||||||||||
Sbjct: 2 tacttcctccgtttcaaaatatttgacgtcgttgacttttttaaatatgtttgaccgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||| ||| ||||| || || ||||||||||||| |||||| |||| ||||||
Sbjct: 173 aataagacgaacggttaaacatgtgct-aaaaagtcaacggcgtcaaatatttagaaacg 231
Query: 238 gatggagta 246
|| ||||||
Sbjct: 232 gagggagta 240
>RF01062;MIR812;AAAA02019701.1/16876-17044 39946:Oryza sativa Indica
Group
Length = 169
Score = 188 bits (95), Expect = 3e-47
Identities = 147/161 (91%), Gaps = 5/161 (3%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttattaaaa-aaattta--aaatatgtaaa 57
Query: 103 actatgt--gtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| | |||||| ||| |||||||||||||||||||||||||| |||| ||| |||
Sbjct: 58 actatatatgtacataaaagtatatttaacaatgaatcaaatgatagaaaaataattaat 117
Query: 161 aattacttaaattttttaataagacgaatggtcaaacacgt 201
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aattacttaaattttttaataagacgaatggtcaaacacgt 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaaca 15
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||| || ||||||||| |||||||||||
Sbjct: 169 gactttttaggacgtgtttgaccattcgtcttatt 135
>RF01058;MIR806;AAAA02025946.1/5563-5811 39946:Oryza sativa Indica
Group
Length = 249
Score = 188 bits (95), Expect = 3e-47
Identities = 167/190 (87%), Gaps = 2/190 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| | || |||||||||||| | |||||||||| ||||||||||| |||
Sbjct: 249 gtactccctccatctctaaatgtttgacaccattgacttttttaaacatgtttgactgtt 190
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
||||||||||||| | ||| |||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 189 cgtcttattcaaaaacttttatgaaatgtgtaaaactatatgtatacataaaaatatatt 130
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 129 taacaataaataaaatgataaaaaaagaataaataattacttaaattttttaataagacg 70
Query: 187 aatggtcaaa 196
|| |||||||
Sbjct: 69 aacggtcaaa 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
||||| ||||||||||| |||||||| || | |||||||||| ||||||||||||||
Sbjct: 175 tttttgaataagacgaacagtcaaacatgtt-taaaaaagtcaatggtgtcaaacattt 232
>RF01058;MIR806;AP005460.3/5216-5454 39947:Oryza sativa Japonica
Group
Length = 239
Score = 188 bits (95), Expect = 3e-47
Identities = 205/238 (86%), Gaps = 4/238 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| |||| |||| ||||||| |||||| ||||||||| ||||||||||||||
Sbjct: 238 tactccctccatttctaaatatttgacaccgttgattttttagcaaatgtttgaccgttc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaa 129
|||||||| ||| | |||||||||||||||||||||| |||| || || |||||||||
Sbjct: 178 gtcttatttaaaaacttttgtgaaatatgtaaaactatatgtatatataagtatatttaa 119
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttt-ttaataagacgaa 188
||| ||||| ||||||| ||||| ||| |||||||||||||||||| | ||||| |||||
Sbjct: 118 caaggaatctaatgataggaaaataattaataattacttaaattttataaataaaacgaa 59
Query: 189 tggtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
||| ||||| || || ||||||||||||| |||||| |||| |||| |||||||||
Sbjct: 58 gggttaaaca--tatttaaaaaagtcaacggcgtcaaatatttagaaatggatggagt 3
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| | || ||||| |||||||||||||| ||||
Sbjct: 165 tttttaaataagacgaacggtcaaacatttgctaaaaaa-tcaacggtgtcaaatattta 223
Query: 232 gaaacggatggagtat 247
|||| ||| |||||||
Sbjct: 224 gaaatggagggagtat 239
>RF01058;MIR806;AC120307.3/45731-45972 39947:Oryza sativa Japonica
Group
Length = 242
Score = 188 bits (95), Expect = 3e-47
Identities = 204/238 (85%), Gaps = 3/238 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 tactccctccgtttctaaatatttgacatcgttgactttttagcacatatttgaccgttc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaacta--tgtgtacatgaaaatatattt 127
|||||||||||| | ||| | |||||||||||| || ||| ||||| || |||||||
Sbjct: 181 gtcttattcaaaagattttataaaatatgtaaaattatttgtatacatataagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacg 186
|||||| ||| |||| ||| |||||||| |||||||||||||| |||| |||||||||
Sbjct: 121 aacaataaattaaataatagaaaaagaattaataattacttaaacgttttgaataagacg 62
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggag 244
|| ||| ||| | || |||||||||||||||||||||| |||| | |||||| ||||
Sbjct: 61 aacggttaaatatgtgtttaaaaagtcaacggtgtcaaatatttagtaacggagggag 4
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcg 70
||||||||||| | |||| ||||||| |||||||||||| | ||||| ||| ||||||||
Sbjct: 4 ctccctccgttactaaatatttgacaccgttgactttttaaacacatatttaaccgttcg 63
Query: 71 tcttattcaaa 81
|||||||||||
Sbjct: 64 tcttattcaaa 74
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| ||||||||||| ||||||| | || || |||||||||||| ||||||| |||| |
Sbjct: 169 ttttgaataagacgaacggtcaaatatgtgct-aaaaagtcaacgatgtcaaatatttag 227
Query: 233 aaacggatggagtat 247
||||||| |||||||
Sbjct: 228 aaacggagggagtat 242
>RF01058;MIR806;AL928758.3/19554-19792 4530:Oryza sativa (rice)
Length = 239
Score = 188 bits (95), Expect = 3e-47
Identities = 169/190 (88%), Gaps = 4/190 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||| |||| ||| |||| || |||| ||||||||||| ||||||||||||||
Sbjct: 238 tactccttccatttctaaacgtttaacgccgttaactttttagcatatgtttgaccgttc 179
Query: 70 gtcttattcaaacaaattt-gtgaaatatgtaaaactat--gtgtacatgaaaatatatt 126
|||||||||||| || ||| |||||||||||||| |||| || ||||||||| ||||||
Sbjct: 178 gtcttattcaaaaaatttttgtgaaatatgtaaa-ctatacgtatacatgaaagtatatt 120
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
|||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 119 taacaatgaatcaaatgataggaaaagaattaataattacttaatttttttaataagacg 60
Query: 187 aatggtcaaa 196
||| ||||||
Sbjct: 59 aatagtcaaa 50
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 188 bits (95), Expect = 3e-47
Identities = 211/242 (87%), Gaps = 7/242 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcaca-tgtttgaccgtt 68
|||||||||||||||||||||||||||| |||| ||||||||| ||| ||||| ||||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttaactttttagtacaatgtttaaccgtt 180
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaact--atgtgtacatgaaaatatatt 126
||||||||| ||| |||||| |||||||||||||||| ||||||| |||||| ||||||
Sbjct: 179 cgtcttattaaaa-aaattt-tgaaatatgtaaaactttatgtgtatatgaaagtatatt 122
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagac 185
| | |||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 121 ttataatgaatcaaatgatacgaaaagaattaataatgacttaaattttttaaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagt 245
|| | ||||| | || | ||||||||||||| |||||| |||| ||||||| |||||
Sbjct: 61 aaacgatcaaatatgt-ttaaaaaagtcaacggcgtcaaatatttaaaaacggagggagt 3
Query: 246 at 247
||
Sbjct: 2 at 1
Score = 81.8 bits (41), Expect = 4e-15
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacac-gtacttaaaaagtcaacggtgtcaaacattt 230
||||||||||||||||| ||| ||||| ||||| ||||||| |||||||||||||||||
Sbjct: 165 ttttttaataagacgaacggttaaacattgtact-aaaaagttaacggtgtcaaacattt 223
Query: 231 tgaaacggatggagtat 247
||||||||| |||||||
Sbjct: 224 tgaaacggagggagtat 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| |||| |||||| |||||||||||| |||| ||||| ||||
Sbjct: 2 tactccctccgtttttaaatatttgacgccgttgacttttttaaacatatttgatcgttt 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AP003917.3/19568-19329 39947:Oryza sativa Japonica
Group
Length = 240
Score = 188 bits (95), Expect = 3e-47
Identities = 207/241 (85%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||| || |||| ||||||| |||| | ||||||||||||||||||| ||||
Sbjct: 239 tactccctccgtctctaaatatttgacaccgttaattttttagcacatgtttgactgttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgt--acatgaaaatatattt 127
||| |||| ||| |||||| |||||||||||||||||| ||| |||| || |||||||
Sbjct: 179 gtcgtatttaaaaaaatttatgaaatatgtaaaactatatgtacacatataagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacga 187
|||||| ||| |||| || ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 119 aacaataaattgaatggtaggaaaagaattaataattacttaaattttttaataaaacga 60
Query: 188 atggtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
| |||||| ||||| || |||||||||| ||||||||| |||| ||||| || ||||||
Sbjct: 59 acggtcaa--acgtatttaaaaaagtcaatggtgtcaaatatttagaaacagagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| ||||| |||| ||||||| | |||||||||| | | ||||||||||||
Sbjct: 2 tactccctctgtttctaaatatttgacaccattgacttttttaaatacgtttgaccgttc 61
Query: 70 gtcttatt 77
|| |||||
Sbjct: 62 gttttatt 69
>RF01058;MIR806;AP008218.1/24274484-24274243 39947:Oryza sativa
Japonica Group
Length = 242
Score = 188 bits (95), Expect = 3e-47
Identities = 201/234 (85%), Gaps = 3/234 (1%)
Strand = Plus / Minus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
|||||||| |||| ||||| | ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 234 tccgtttctaaatatttgataccgttgactttttagcacatgtttgaccattcctcttat 175
Query: 77 tcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatg 134
|| || | |||||||||||| ||||||||| |||| ||| || ||||||||||||||
Sbjct: 174 tcgaaaacttttgtgaaatatctaaaactatatgtatacatataagtatatttaacaatg 115
Query: 135 aatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaatggtc 193
|||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 114 aatcaaatgataggaaaagaattaataattacttaaattttttgaataatacgaacggtc 55
Query: 194 aaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||| |||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 54 aaacaaaattaaaaaaagtcaatagtgtcaaatatttagaaacggatggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||| ||||||||||||| || || |||||||||||||| ||||| |||| ||||||
Sbjct: 174 aataagaggaatggtcaaacatgtgct-aaaaagtcaacggtatcaaatatttagaaacg 232
Query: 238 gatggagta 246
||| |||||
Sbjct: 233 gatagagta 241
>RF01062;MIR812;AP008213.1/2222065-2221894 39947:Oryza sativa
Japonica Group
Length = 172
Score = 186 bits (94), Expect = 1e-46
Identities = 134/146 (91%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaa 103
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 2 actttttagcacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaa 61
Query: 104 ctatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataat 163
|||| | |||| || |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 ctatatacacatataagtatatttaacaatgaatcaaatgatatgaaaagaattaataat 121
Query: 164 tacttaaatttttt-aataagacgaa 188
||||||| |||||| |||||||||||
Sbjct: 122 tacttaatttttttaaataagacgaa 147
>RF01062;MIR812;AP003437.3/37510-37337 39947:Oryza sativa Japonica
Group
Length = 174
Score = 186 bits (94), Expect = 1e-46
Identities = 145/160 (90%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
|||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||
Sbjct: 1 gactttttagcacatgtttgaccgtttgtcttattcaaaaacttttgtgaaatatataaa 60
Query: 103 actatgtgta--catgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||| ||| ||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 61 actatatgtatacataaaaatatatttaagaatgaatcaaatgataggaaaagaattaat 120
Query: 161 aattacttaaatttttt--aataagacgaatggtcaaaca 198
||||||||||||||||| ||||||||||| |||||||||
Sbjct: 121 aattacttaaatttttttgaataagacgaacggtcaaaca 160
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 56 atgtttgaccgttcgtcttattcaaacaaattt 88
|||||||||||||||||||||||||| ||||||
Sbjct: 161 atgtttgaccgttcgtcttattcaaaaaaattt 129
>RF01058;MIR806;AP008207.1/31190054-31189814 39947:Oryza sativa
Japonica Group
Length = 241
Score = 186 bits (94), Expect = 1e-46
Identities = 197/226 (87%), Gaps = 9/226 (3%)
Strand = Plus / Minus
Query: 16 ctccgtttcaaaatgtttgacatcgttgacttttt--agcacatgtttgaccgttcgtct 73
|||||||| ||||||||||||| |||||| ||||| | |||| |||||||||||||||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttgatttttttaattacatatttgaccgttcgtct 175
Query: 74 tattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaaca 131
|||| || |||| ||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct: 174 tatttaa--ttatttttgaaataagtaaaactatatgtgtacatgaaagtatatttaacg 117
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaaatttttt--aataagacgaat 189
| |||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||
Sbjct: 116 acgaatcaaatgatataaaaaaaataaataattacttaaatttttttgaataagatgaat 57
Query: 190 ggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
||| |||||| ||| ||||||||||||||||| |||||||||||||
Sbjct: 56 ggttaaacacatac-taaaaagtcaacggtgttaaacattttgaaa 12
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 21 tttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaa 80
||||||||||||| ||| |||||||||||||| | ||||| ||| ||| ||||||||||
Sbjct: 12 tttcaaaatgtttaacaccgttgactttttagtatgtgtttaaccattcatcttattcaa 71
Query: 81 acaaattt 88
| ||||||
Sbjct: 72 aaaaattt 79
Score = 61.9 bits (31), Expect = 4e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaag-tcaacggtgtcaaacattttgaaac 236
||||||||||| ||||||| | ||| ||||||| |||||||||||||||||||| ||||
Sbjct: 171 aataagacgaacggtcaaatatgtaattaaaaaaatcaacggtgtcaaacattttaaaac 230
Query: 237 gga 239
|||
Sbjct: 231 gga 233
>RF01058;MIR806;ABRL01001931.1/4966-5201 65489:Oryza barthii
Length = 236
Score = 186 bits (94), Expect = 1e-46
Identities = 207/241 (85%), Gaps = 9/241 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||||||| ||||| ||||||| |||||||||||||||| ||| ||| |||
Sbjct: 235 tactccctccgttttaaaatatttgacaccgttgactttttagcatatg----accattc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 179 gtcttatttaaatttttttgtgaaatatgtaaaactatatgtgtacatgaaagtatattt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaat-tttttaataagacg 186
||||||||||||||||||||||||| ||||||||| || |||||| |||| |||||||||
Sbjct: 119 aacaatgaatcaaatgatatgaaaaaaataaataaataattaaatattttgaataagacg 60
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||| |||||||| | || || | ||||||||||||||| || ||||||| ||||||
Sbjct: 59 aatgatcaaacactaa--aaagaaattaacggtgtcaaacatattaaaacggagggagta 2
Query: 247 t 247
|
Sbjct: 1 t 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 194 taaaaagtcaacggtgtcaaatattttaaaacggagggagtat 236
>RF01058;MIR806;AAAA02030957.1/6469-6721 39946:Oryza sativa Indica
Group
Length = 253
Score = 186 bits (94), Expect = 1e-46
Identities = 210/246 (85%), Gaps = 17/246 (6%)
Strand = Plus / Minus
Query: 15 cctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgttcgtct 73
|||| |||||||||||||||||| || | |||||||| | ||||||||||| |||||| |
Sbjct: 244 cctctgtttcaaaatgtttgacaccgctaactttttaagtacatgtttgactgttcgttt 185
Query: 74 tattcaaacaaatttgtgaaatatgtaaaactatgtgt------------acatgaaaat 121
|||| ||| | ||| ||||||||||||||||| ||| |||||||| |
Sbjct: 184 tattaaaa--attttatgaaatatgtaaaactacatgtctacatgaatagacatgaaagt 127
Query: 122 atatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aat 180
|||||||||||||||||| || ||||||||||||||||||| |||||||||||||| |||
Sbjct: 126 atatttaacaatgaatcagatcatatgaaaagaataaataaatacttaaattttttgaat 67
Query: 181 aagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggat 240
|||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 66 aagacgaatggtcaaatacgtac-taaaaagtcaacggtgtcaaatattttgaaacggag 8
Query: 241 ggagta 246
||||||
Sbjct: 7 ggagta 2
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||||||||||| ||||||| |||||||||||||| || | ||||||| ||
Sbjct: 1 gtactccctccgtttcaaaatatttgacaccgttgactttttagtacgtatttgaccatt 60
Query: 69 cgtcttattcaaa 81
|||||||||||||
Sbjct: 61 cgtcttattcaaa 73
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 168 taaattttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaaca 227
|||| |||||||||| ||||| |||||||| ||||||||||||| | ||||||||||||
Sbjct: 171 taaaatttttaataaaacgaacagtcaaacatgtacttaaaaagttagcggtgtcaaaca 230
Query: 228 ttttgaaac 236
|||||||||
Sbjct: 231 ttttgaaac 239
>RF01058;MIR806;AP003509.3/79102-78866 39947:Oryza sativa Japonica
Group
Length = 237
Score = 186 bits (94), Expect = 1e-46
Identities = 145/161 (90%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||| |||||||||||||| |||||||||| ||| |||||||| |||||
Sbjct: 236 tactccttccgtttctaaatgtttgacatcattgactttttcgcatatgtttgatcgttc 177
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| || ||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 176 gtcttattcaaaaaattttgtgaaatatgtaaaactatatgtatacatgaacgtatattt 117
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattactt 168
|||||||||||||| |||| ||||||||| |||||||||||
Sbjct: 116 aacaatgaatcaaacgataggaaaagaattaataattactt 76
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 206 aaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||| | |||||||||||| |||||||| |||||||
Sbjct: 196 aaaaagtcaatgatgtcaaacatttagaaacggaaggagtat 237
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||| || |||| ||| || | |||||||||||| ||||||||||||||||
Sbjct: 2 tactccatccgtctctaaatatttaacgttgttgactttttaaaacatgtttgaccgttc 61
Query: 70 g 70
|
Sbjct: 62 g 62
>RF01058;MIR806;AAAA02019742.1/24901-24665 39946:Oryza sativa Indica
Group
Length = 237
Score = 186 bits (94), Expect = 1e-46
Identities = 167/189 (88%), Gaps = 3/189 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||| |||| |||| || || ||||||||||||||||||||||||||| ||
Sbjct: 237 gtactccctccatttctaaatattcgatgccgttgactttttagcacatgtttgaccatt 178
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatattta 128
||||||||||||| | ||| |||||||| ||||||||| | |||| || |||||||||
Sbjct: 177 cgtcttattcaaaaacttttatgaaatatttaaaactatat--acataaagatatattta 120
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacga 187
|||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 119 acaatgaatcaaatgataggaaaagaattaataattacttaaatttttttaataagacga 60
Query: 188 atggtcaaa 196
| |||||||
Sbjct: 59 acggtcaaa 51
Score = 54.0 bits (27), Expect = 1e-06
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacgg 218
||||| ||||||||||||||||||||| || | ||||||||||||||
Sbjct: 163 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacgg 208
>RF01058;MIR806;AP008207.1/17336421-17336659 39947:Oryza sativa
Japonica Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 149/165 (90%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 230 ccgtttctaaatatttgacatcgttaactttttatcacatgtttgaccgttcgtcttatt 171
Query: 78 caaacaaattt-gtgaaatatgtaaaactatgtgta--catgaaaatatatttaacaatg 134
|||| || ||| ||||||||||||||||||| | || |||| || ||||||||||||||
Sbjct: 170 caaaaaacttttgtgaaatatgtaaaactatatttatacatgtaagtatatttaacaatg 111
Query: 135 aatcaaatgatatgaaaagaataaataattacttaaattttttaa 179
|||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 110 aatcaaatgatagaaaaagaattaataattacttaaattttttaa 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| || |||||||| |||| ||||||| ||||
Sbjct: 165 tttttgaataagacgaacggtcaaacatgt-gataaaaagttaacgatgtcaaatattta 223
Query: 232 gaaacgg 238
|||||||
Sbjct: 224 gaaacgg 230
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 186 bits (94), Expect = 1e-46
Identities = 168/189 (88%), Gaps = 4/189 (2%)
Strand = Plus / Minus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgttcgtc 72
||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 236 ccctccgtttctaaatgtttgacaccgttgactttttaagcacatgtttgaccgtttatc 177
Query: 73 ttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaac 130
||||||||| || | |||||||||||||||||||| | || ||||||| ||||||||||
Sbjct: 176 ttattcaaaaaattctgtgaaatatgtaaaactatatatatacatgaaagtatatttaac 117
Query: 131 aatgaatcaaatgatatgaaaagaataaataattactta-aattttttaataagacgaat 189
|||||||||||||||| ||||| ||| |||||||||||| |||||||||| || ||||
Sbjct: 116 aatgaatcaaatgataggaaaataattaataattacttagttttttttaatatgatgaat 57
Query: 190 ggtcaaaca 198
|||||||||
Sbjct: 56 ggtcaaaca 48
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||| || ||||||||| || ||||||||||||||||||||||||||||
Sbjct: 166 tttttgaataagataaacggtcaaacatgtgcttaaaaagtcaacggtgtcaaacattta 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
>RF01058;MIR806;AP008208.1/31673629-31673391 39947:Oryza sativa
Japonica Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 196/225 (87%), Gaps = 5/225 (2%)
Strand = Plus / Minus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
|||||||||||| |||||| |||||| | ||||||| ||||||||||||||| ||| |
Sbjct: 223 aaatgtttgacaccgttgattttttaacccatgtttaaccgttcgtcttattaaaa-att 165
Query: 86 tttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatgaatcaaatg 143
|||||||||||| ||||| ||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 164 tttgtgaaatatataaaattatatgcttacataaaaatatatttaacaataaatcaaatg 105
Query: 144 atatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgta 202
||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct: 104 ataggaaaagaattaataattacttaaattttttaaataaaacgaatggtcaaacatatg 45
Query: 203 cttaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
| |||||||| |||||||| ||||||| |||||||||||||||
Sbjct: 44 c-taaaaagttaacggtgttaaacattccaaaacggatggagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||| ||||||| ||| |||| ||||||||||| |||||||||| |||
Sbjct: 2 tactccatccgttttggaatgtttaacaccgttaactttttagcatatgtttgaccattc 61
Query: 70 gtcttatt 77
|| |||||
Sbjct: 62 gttttatt 69
Score = 52.0 bits (26), Expect = 4e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
|||||||||||||||| ||| ||||| | ||||||| |||||||||||||||||||
Sbjct: 167 tttttaataagacgaacggttaaacatggg-ttaaaaaatcaacggtgtcaaacattt 223
>RF01058;MIR806;AP003517.3/100961-100723 39947:Oryza sativa Japonica
Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 207/240 (86%), Gaps = 6/240 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| |||||||| |||| ||| ||| |||| || |||||| | | ||| ||| |||
Sbjct: 238 tactccatccgtttcgaaatatttaacaccgttaacgttttagtgcgtatttaaccattc 179
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatgaaaatatattt 127
|||||||| ||| || ||||||||||||| ||| ||| |||||||||||| |||||||
Sbjct: 178 gtcttattaaaaaaa--ttgtgaaatatgtgaaattatatgtgtacatgaaagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatt-ttttaataagacg 186
||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 120 aacaacaaatcaaatgatatgaaaagaataaataattacttaaatttttttaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|| ||||||||| ||| || |||||||||||||||||||||||| |||| || ||||||
Sbjct: 60 aacggtcaaacatatac-tagaaagtcaacggtgtcaaacattttaaaaccgagggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||| |||| ||||||||||||| |||||||||| ||| | ||||||||||||||
Sbjct: 2 tactccctcggttttaaaatgtttgacaccgttgactttctagtatatgtttgaccgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
Score = 71.9 bits (36), Expect = 4e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||| ||| ||| ||| |||| || |||||||| ||| ||||
Sbjct: 165 ttttttaataagacgaatggttaaatacgcact-aaaacgttaacggtgttaaatatttc 223
Query: 232 gaaacggatggagtat 247
||||||||||||||||
Sbjct: 224 gaaacggatggagtat 239
>RF01058;MIR806;AP008207.1/4618665-4618903 39947:Oryza sativa
Japonica Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 167/189 (88%), Gaps = 3/189 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
||||||||||||| |||||||||||| |||||||||||| ||||||||||||| || ||
Sbjct: 236 ctccctccgtttctaaatgtttgacactgttgactttttaccacatgtttgaccatttgt 177
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaa 129
|||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 176 cttattcaaaattttttgtgaaatatgtaaaactatatgtatacatgaaagtatatttaa 117
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaat 189
|||||||||||||| || |||| |||| ||||||||||| | |||||||||||||||| |
Sbjct: 116 caatgaatcaaatggtaagaaaggaattaataattactt-atttttttaataagacgagt 58
Query: 190 ggtcaaaca 198
| |||||||
Sbjct: 57 gatcaaaca 49
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||| |||||||| |||||||||||| || | ||||||||||| ||||||||||||| |
Sbjct: 166 ttttgaataagacaaatggtcaaacatgtggt-aaaaagtcaacagtgtcaaacatttag 224
Query: 233 aaacggatggag 244
||||||| ||||
Sbjct: 225 aaacggagggag 236
>RF01058;MIR806;BX664712.3/32416-32656 4530:Oryza sativa (rice)
Length = 241
Score = 186 bits (94), Expect = 1e-46
Identities = 168/189 (88%), Gaps = 4/189 (2%)
Strand = Plus / Minus
Query: 40 gttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgt 99
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 210 gttgactttttagcacatgtttgaccgttcgtcttattcaaaaaattttgtgaaatatgt 151
Query: 100 aaaac--tatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaata 157
||||| ||| | ||||| ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 150 aaaactatatatatacataaaagtatatttaacaatgaatcaaatgatatgaaaaaaatt 91
Query: 158 aataattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaaagtcaac 216
||||| || ||||||||||| ||||| || | ||||||||| | | ||||||||||||
Sbjct: 90 aataaatatttaaattttttaaataaaacaagcggtcaaacatatgc-taaaaagtcaac 32
Query: 217 ggtgtcaaa 225
|||||||||
Sbjct: 31 ggtgtcaaa 23
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccg 66
||||||||||||||| | ||||||| |||||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtttcgttttatttgacaccgttgactttttagcatatgtttgaccg 58
Score = 44.1 bits (22), Expect = 0.001
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaa 225
||||| ||||||||||| ||||||||| || | |||||||||||| | ||||||
Sbjct: 167 tttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacagcgtcaaa 219
>RF01062;MIR812;AAAA02017130.1/7803-7973 39946:Oryza sativa Indica
Group
Length = 171
Score = 184 bits (93), Expect = 4e-46
Identities = 142/156 (91%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
|||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 1 gactttttagcatatgtttgaccgttcgtcttattaaaaaaaatta-tgaaatatgtaaa 59
Query: 103 actatgtgta--catgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
||||| |||| ||||||| |||||||||||||||||||||||||| |||| ||| |||
Sbjct: 60 actatatgtatacatgaaagtatatttaacaatgaatcaaatgatagaaaaataattaat 119
Query: 161 aattacttaaattttttaataagacgaatggtcaaa 196
|||||||||| |||||||||||||||||||||||||
Sbjct: 120 aattacttaatttttttaataagacgaatggtcaaa 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
||||||||||||||||| |||||||||
Sbjct: 41 ttttttaataagacgaacggtcaaaca 15
>RF01058;MIR806;AC130607.2/29520-29261 39947:Oryza sativa Japonica
Group
Length = 260
Score = 184 bits (93), Expect = 4e-46
Identities = 140/152 (92%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 90 tgaaatatgtaaaactat--gtgtacatgaaaatatatttaacaatgaatcaaatgatat 147
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 151 tgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatat 92
Query: 148 gaaaagaataaataattacttaaa-ttttttaataagacgaatggtcaaacacgtactta 206
||||||||| |||||||||||||| ||||| ||||||||||||||| |||||| | | ||
Sbjct: 91 gaaaagaattaataattacttaaactttttaaataagacgaatggttaaacacatgc-ta 33
Query: 207 aaaagtcaacggtgtcaaacattttgaaacgg 238
||||||||| || |||||||||||||||||||
Sbjct: 32 aaaagtcaaaggcgtcaaacattttgaaacgg 1
Score = 131 bits (66), Expect = 5e-30
Identities = 97/105 (92%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||
Sbjct: 260 ccgtttaaaaatgtttgacaccgttgattttttagcacatgtttgactgttcgtcttatt 201
Query: 78 caaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaa 120
|||| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 200 caaa-aaaattgtgaaatatgtaaaactatatgtgtacatgaaaa 157
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||
Sbjct: 1 ccgtttcaaaatgtttgacgcctttgactttttagcatgtgtttaaccattcgtcttatt 60
Score = 61.9 bits (31), Expect = 4e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||||| || || ||||| ||||||||||||||||||||
Sbjct: 195 tttttgaataagacgaacagtcaaacatgtgctaaaaaa-tcaacggtgtcaaacatttt 253
Query: 232 gaaacgg 238
||||||
Sbjct: 254 taaacgg 260
>RF01058;MIR806;AAAA02026173.1/5859-5619 39946:Oryza sativa Indica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 200/232 (86%), Gaps = 4/232 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||||||||||| ||||| ||||||| |||| ||||||| |||
Sbjct: 240 tactccctccgtttcgaaatgtttgacactgttgattttttagtacatatttgaccattc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||| ||| ||||| |||||| ||||| ||| || ||||| |||||||||||
Sbjct: 180 gtcttatttaaatttttttgtaaaatatataaaattatatgcctacataaaaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaatcaaatgatagaaaaagaattaataattacttaaattttttaaataagacg 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgg 238
|||||||||| | || | ||||| | |||||||||||| |||| |||||||
Sbjct: 60 aatggtcaaatatgt-ttaaaaaaattaacggtgtcaaatatttcgaaacgg 10
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 178 aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||| ||||||
Sbjct: 173 aataagacgaatggtcaaatatgtactaaaaaa-tcaacagtgtcaaacatttcgaaacg 231
Query: 238 gatggagtat 247
|| |||||||
Sbjct: 232 gagggagtat 241
>RF01058;MIR806;AAAA02007519.1/45475-45716 39946:Oryza sativa Indica
Group
Length = 242
Score = 184 bits (93), Expect = 4e-46
Identities = 162/180 (90%), Gaps = 5/180 (2%)
Strand = Plus / Minus
Query: 59 tttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaactat--gtgtacatg 116
||||||||||| ||||||| ||| ||||| | ||||||||||||||||| ||| |||||
Sbjct: 190 tttgaccgttcatcttatttaaaaaaattgg-gaaatatgtaaaactatacgtgcacatg 132
Query: 117 aaaatatatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttt 176
||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct: 131 aaagtatatttaacaataaatcaaatgatatgaaaagaataaataaataattaaattttt 72
Query: 177 t-aataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
| ||||||||||||| |||||||| ||| |||||| |||||||||||||| |||||||||
Sbjct: 71 taaataagacgaatgatcaaacacatac-taaaaaatcaacggtgtcaaatattttgaaa 13
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||| | ||||||||| ||||||| |||||| ||||||| | ||||||| | |||
Sbjct: 2 tactcccttcatttcaaaatatttgacaccgttgattttttagtatgtgtttgatcattc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>RF01058;MIR806;AP008213.1/24894769-24894520 39947:Oryza sativa
Japonica Group
Length = 250
Score = 184 bits (93), Expect = 4e-46
Identities = 194/224 (86%), Gaps = 4/224 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
|||||||||||||| || |||||||||||||| ||| ||||||||| ||||| || |
Sbjct: 224 aaatgtttgacatcattaactttttagcacatatttaaccgttcgttttattttaaaact 165
Query: 86 tttgtgaaatatgtaaaactatgtgt--acatgaaaatatatttaacaatgaatcaaatg 143
||| ||| |||||||||| ||| ||| |||| |||||||||||||||||||||||||||
Sbjct: 164 tttatgagatatgtaaaattatatgtctacataaaaatatatttaacaatgaatcaaatg 105
Query: 144 atatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgta 202
||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 104 ataggaaaagaattaataattacttaaattttttaaataagacgaatggtcaaacatat- 46
Query: 203 cttaaaaagtcaacggtgtcaaacattttgaaacggatggagta 246
|||||| ||||||| || |||||||| ||||||||| |||||
Sbjct: 45 gataaaaaatcaacggcgttaaacatttcgaaacggattgagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 17 tccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttat 76
|||||||| |||||||| || |||||| |||||| || |||||||||| ||||||||||
Sbjct: 9 tccgtttcgaaatgtttaacgccgttgattttttatcatatgtttgaccattcgtcttat 68
Query: 77 t 77
|
Sbjct: 69 t 69
>RF01058;MIR806;AC136787.4/71986-72222 39947:Oryza sativa Japonica
Group
Length = 237
Score = 184 bits (93), Expect = 4e-46
Identities = 201/231 (87%), Gaps = 7/231 (3%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgacttttta-gcacatgtttgaccgttcgt 71
|||||||||||| |||||||||||| ||||||||||||| | |||| ||||||| |||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttacgtacatatttgaccattcgt 177
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaa 129
|||||| ||| || ||||||||||||||||||||| | || ||||||| |||||||||
Sbjct: 176 cttattaaaa--aagttgtgaaatatgtaaaactatatatatacatgaaagtatatttaa 119
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaa 188
||||||||||||||||| ||||| ||| |||||| |||||| |||||| ||||||| |||
Sbjct: 118 caatgaatcaaatgataagaaaataattaataatcacttaatttttttcaataagatgaa 59
Query: 189 tggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| ||||||| || | ||||||||||||| |||||| |||| ||||||||
Sbjct: 58 tgatcaaacatgt-ttaaaaaagtcaacggcgtcaaatatttagaaacgga 9
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct: 165 ttttttaataagacgaatggtcaaatatgtacgtaaaaagtcaacggtgtcaaacattta 224
Query: 232 gaaacgga 239
||||||||
Sbjct: 225 gaaacgga 232
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||||| |||| |||||| |||||||||||| |||||||||| | ||| |||
Sbjct: 6 ccctccgtttctaaatatttgacgccgttgacttttttaaacatgtttgatcattcatct 65
Query: 74 tattcaaacaaatt 87
|||| ||| |||||
Sbjct: 66 tattgaaaaaaatt 79
>RF01058;MIR806;AP008209.1/14794453-14794693 39947:Oryza sativa
Japonica Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 169/192 (88%), Gaps = 3/192 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| ||| ||||| |||| |||||||||||||| |||||| ||||||||||||||||
Sbjct: 240 tactcactctgtttctaaatatttgacatcgttgattttttattacatgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaa--tatattt 127
|||||||||||| | |||||||||||||||||||||| |||| | | | | |||||||
Sbjct: 180 gtcttattcaaaaacttttgtgaaatatgtaaaactatatgtatacgtataagtatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||| |||||||| ||||||||| || ||||||||||||||||| |||||||||
Sbjct: 120 aacaatgaattaaatgataggaaaagaattaaaaattacttaaattttttgaataagacg 61
Query: 187 aatggtcaaaca 198
|| |||||||||
Sbjct: 60 aacggtcaaaca 49
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| ||||||||| |||| ||| || |||| ||||||| | ||||||||||||||
Sbjct: 2 tactctctccgtttctaaatatttaacgccgttaacttttttaaatatgtttgaccgttc 61
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 62 gtcttattcaaa 73
Score = 50.1 bits (25), Expect = 2e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||||| ||| |||||| |||||| ||||||| ||||
Sbjct: 167 tttttgaataagacgaacggtcaaacatgta-ataaaaaatcaacgatgtcaaatattta 225
Query: 232 gaaac 236
|||||
Sbjct: 226 gaaac 230
>RF01058;MIR806;AP008207.1/41268949-41269190 39947:Oryza sativa
Japonica Group
Length = 242
Score = 184 bits (93), Expect = 4e-46
Identities = 210/243 (86%), Gaps = 7/243 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| |||||||| |||||||||||||||||| || |||||||
Sbjct: 241 tactccctccgtttctaaatatttgacattgttgactttttagcacatacttaaccgttc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
||||||| ||| | ||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 181 atcttatttaaaaacttttgtgaaatatgtaaaactatatgtatacataaaaatatattt 122
Query: 128 aacaatgaatcaaatgat-atgaaaagaataaataattacttaaa-ttttttaataagac 185
|||||||||| ||||||| | |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 121 aacaatgaataaaatgataaaaaaaagaattaataattatttaaatttttttaataagac 62
Query: 186 gaatggtcaaacacgtactt-aaaaagtcaacggtgtcaaacattttgaaacggatggag 244
||| ||||||||| || || |||||||||| || | ||| |||| |||||||||||||
Sbjct: 61 gaacggtcaaaca--tatttaaaaaagtcaatggcattaaatatttagaaacggatggag 4
Query: 245 tat 247
|||
Sbjct: 3 tat 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
|||||||||||| ||||||| |||| |||||||| |||||||
Sbjct: 200 taaaaagtcaacaatgtcaaatatttagaaacggagggagtat 242
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 atgtttgaccgttcgtcttatt 77
||||||||||||||||||||||
Sbjct: 48 atgtttgaccgttcgtcttatt 69
>RF01062;MIR812;AL731756.4/3482-3656 4530:Oryza sativa (rice)
Length = 175
Score = 182 bits (92), Expect = 2e-45
Identities = 154/173 (89%), Gaps = 5/173 (2%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
|||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 1 gactttttagcatatgtttggccgttcgtcttattcaaaaacttttgtgaaatatgtaaa 60
Query: 103 actatgtg--tacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
| ||| || ||||| |||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 61 attatatgcctacataaaaatatatttaacaatgaatcaaatgataggaaaagaattaat 120
Query: 161 aattactt---aaattttttaataagacgaatggtcaaacacgtacttaaaaa 210
|||||||| |||||||| ||||||||||| ||||||||| ||| |||||||
Sbjct: 121 aattacttaaaaaatttttgaataagacgaacggtcaaacatgtatttaaaaa 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 54 acatgtttgaccgttcgtcttattcaaa 81
||||||||||||||||||||||||||||
Sbjct: 164 acatgtttgaccgttcgtcttattcaaa 137
>RF01062;MIR812;AP008212.1/3897291-3897462 39947:Oryza sativa
Japonica Group
Length = 172
Score = 182 bits (92), Expect = 2e-45
Identities = 154/170 (90%), Gaps = 6/170 (3%)
Strand = Plus / Plus
Query: 44 actttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaaa 103
|||||||||||||||||||||| ||||||||||| ||| || || ||||||||||||||
Sbjct: 2 actttttagcacatgtttgaccattcgtcttattaaaaaaa--ttatgaaatatgtaaaa 59
Query: 104 ctatgt--gtacatgaaaatatatttaacaatgaatcaaatgatatg-aaaagaataaat 160
|||||| |||| ||||| || ||||||||||||||||||||||||| |||| |||||||
Sbjct: 60 ctatgtatgtacgtgaaagtaaatttaacaatgaatcaaatgatatgaaaaaaaataaat 119
Query: 161 aattacttaaatttttt-aataagacgaatggtcaaacacgtacttaaaa 209
||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 120 aattacttaaattttttgaataagacgaatggtcaaacatgtactaaaaa 169
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 172 gactttttagtacatgtttgaccattcgtcttattcaaa 134
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 172 ttttttaataagacgaatggtcaaaca 198
|||||||||||||||||||||||||||
Sbjct: 41 ttttttaataagacgaatggtcaaaca 15
>RF01058;MIR806;AAAA02034417.1/5267-5034 39946:Oryza sativa Indica
Group
Length = 234
Score = 182 bits (92), Expect = 2e-45
Identities = 190/222 (85%), Gaps = 18/222 (8%)
Strand = Plus / Minus
Query: 18 ccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 167
Query: 78 caaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaacaatga 135
||| |||||| | ||||||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 166 -aaaaaaatttataaaatatgtaaaactatatgtgtacataaaagtatatttaacaatga 108
Query: 136 atcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaa 195
|||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct: 107 atcaaatgatat-aaaaaaataaataa--------------aaataagacgaatggtcaa 63
Query: 196 acacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
||||||||| ||||| |||||| ||| ||||||||| |||||
Sbjct: 62 acacgtactaaaaaaatcaacgatgttaaacattttaaaacg 21
Score = 85.7 bits (43), Expect = 3e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||
Sbjct: 161 ttttttaataagacgaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 219
Query: 232 gaaacgg 238
||||||
Sbjct: 220 aaaacgg 226
Score = 56.0 bits (28), Expect = 3e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 19 cgtttcaaaatgtttgacatcgttgacttttt-agcacatgtttgaccgttcgtcttatt 77
||||| ||||||||| |||||||||| ||||| || || ||||||||| |||||||||||
Sbjct: 21 cgttttaaaatgtttaacatcgttgatttttttagtacgtgtttgaccattcgtcttatt 80
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 182 bits (92), Expect = 2e-45
Identities = 181/207 (87%), Gaps = 4/207 (1%)
Strand = Plus / Minus
Query: 27 aatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaat 86
|||||||||| |||||||||||| |||||||||||| ||||||||||||||| || |
Sbjct: 213 aatgtttgacgccgttgactttttcaaacatgtttgaccattcgtcttattcaaaaaatt 154
Query: 87 ttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaacaatgaatcaaatga 144
|||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 153 ttgtgaaatatgtaaaactatatgtatacataaaagtatatttaacaatgaatcaaatga 94
Query: 145 tatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgtac 203
|| || ||||| ||||| |||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 93 tagaaatagaattaataactacttatattttttaaataagacgaacggtcaaacatgt-t 35
Query: 204 ttaaaaagtcaacggtgtcaaacattt 230
| ||||||||||||| |||||||||||
Sbjct: 34 taaaaaagtcaacggcgtcaaacattt 8
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttatt 77
||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 8 aaatgtttgacgccgttgacttttttaaacatgtttgaccgttcgtcttatt 59
Score = 60.0 bits (30), Expect = 2e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatt 229
||||| ||||||||||||||||||||| || | ||||||||||||| ||||||||||
Sbjct: 157 tttttgaataagacgaatggtcaaacatgt-ttgaaaaagtcaacggcgtcaaacatt 213
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 182 bits (92), Expect = 2e-45
Identities = 198/230 (86%), Gaps = 5/230 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||| |||
Sbjct: 241 tactccctccgtttctaaatatttgacaccgttaactttttagcacatgtttgaccattc 182
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatattt 127
|||||||| ||| | |||||||||||||||||||||| |||| ||| || |||||||
Sbjct: 181 gtcttatttaaaaacttttgtgaaatatgtaaaactatatgtatgcatataagtatattt 122
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa--ttttttaataagac 185
|||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 121 cacaatgaatcaaatgataggaaaataattaataattacttaaattttttttaataagac 62
Query: 186 gaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaa 235
|| |||||| | | ||||||| |||||||||||||| |||| ||||
Sbjct: 61 aaacagtcaaatatat-tttaaaaaatcaacggtgtcaaatatttagaaa 13
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||||||||||| || || ||||||| |||||||||||| ||||
Sbjct: 168 tttttaaataagacgaatggtcaaacatgtgct-aaaaagttaacggtgtcaaatattta 226
Query: 232 gaaacggatggagta 246
|||||||| ||||||
Sbjct: 227 gaaacggagggagta 241
>RF01058;MIR806;AP008208.1/19468197-19467957 39947:Oryza sativa
Japonica Group
Length = 241
Score = 182 bits (92), Expect = 2e-45
Identities = 199/231 (86%), Gaps = 4/231 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||| ||||||| |||| ||| | || ||| |||||||||||| |||||||||||||
Sbjct: 240 tactccatccgtttttaaatatttaatattgtttactttttagcacgtgtttgaccgttc 181
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaac--tatgtgtacatgaaaatatattt 127
|||||||||||| | ||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 180 gtcttattcaaaaacttttgtgaaatatgtaaaactatatgtatacatataaatatattt 121
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaa-ttttttaataagacg 186
|||||| ||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 120 aacaataaattaaatgataggaaaataattaataattacttaaatttttttaataagaca 61
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacg 237
|| ||||||||| | ||||||||||||||| |||||| |||| ||||||
Sbjct: 60 aacggtcaaacaaat-tttaaaaagtcaacggcgtcaaatatttagaaacg 11
Score = 50.1 bits (25), Expect = 2e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtc 72
||||| |||||| |||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 5 tcccttcgtttctaaatatttgacgccgttgactttttaaaatttgtttgaccgtttgtc 64
Query: 73 ttatt 77
|||||
Sbjct: 65 ttatt 69
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||||||||| | |||||||| ||| | | ||| ||||
Sbjct: 167 tttttgaataagacgaacggtcaaacacgtgc-taaaaagtaaacaatattaaatattta 225
Query: 232 gaaacggatggagtat 247
|||||||||||||||
Sbjct: 226 aaaacggatggagtat 241
>RF01058;MIR806;AP003350.3/33008-32769 39947:Oryza sativa Japonica
Group
Length = 240
Score = 180 bits (91), Expect = 6e-45
Identities = 198/230 (86%), Gaps = 4/230 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||| |||||||||||||| ||||||| | |||||| ||||| ||||||||||| |||
Sbjct: 239 tactctctccgtttcaaaatatttgacaccattgactgtttagtacatgtttgacacttc 180
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||||||| | ||| | |||||||||||| ||| || ||||| |||||||| ||
Sbjct: 179 gtcttattcaaaaacttttataaaatatgtaaaattatatgcctacatcaaaatatactt 120
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 119 aacaataaatcaaatgataggaaaagaattaataattacttaaattttttaaataagaca 60
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
|| ||||||||| || | ||||||||||||| |||| | ||||||||||
Sbjct: 59 aacggtcaaacatgtgc-taaaaagtcaacgacgtcagatattttgaaac 11
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 15 cctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtctt 74
|||| |||||||||| | |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 6 cctcagtttcaaaatatctgacgtcgttgactttttagcacatgtttgaccgtttgtctt 65
Query: 75 att 77
|||
Sbjct: 66 att 68
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||||| ||||| ||| |||||| ||||||||| |||||
Sbjct: 166 tttttgaataagacgaagtgtcaaacatgtact-aaacagtcaatggtgtcaaatatttt 224
Query: 232 gaaacgga 239
||||||||
Sbjct: 225 gaaacgga 232
>RF01058;MIR806;AAAA02031464.1/18598-18832 39946:Oryza sativa Indica
Group
Length = 235
Score = 180 bits (91), Expect = 6e-45
Identities = 161/182 (88%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
|||||||||| |||| |||||||||||| ||||||||||||||||||| |||||| ||||
Sbjct: 234 tactccctccatttcgaaatgtttgacaccgttgactttttagcacatttttgactgttc 175
Query: 70 gtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatattt 127
|||||||||||| | ||| ||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 174 gtcttattcaaaaacttttatgagatatataaaattatatgcctacataaaaatatattt 115
Query: 128 aacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacg 186
|||||||||||||||||||| | || ||| |||||||||||||||||||| |||||||||
Sbjct: 114 aacaatgaatcaaatgatataagaataattaataattacttaaattttttaaataagacg 55
Query: 187 aa 188
||
Sbjct: 54 aa 53
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| |||||| | || || |||||||||||||||||||||||||
Sbjct: 161 tttttgaataagacgaacagtcaaaaatgtgct-aaaaagtcaacggtgtcaaacatttc 219
Query: 232 gaaacggatggagtat 247
|||| ||| |||||||
Sbjct: 220 gaaatggagggagtat 235
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 38 tcgttgactttttagcacatgtttgaccgttcgtcttatt 77
|||||||||||||| || |||||| | |||||||||||||
Sbjct: 24 tcgttgactttttatcaaatgttttatcgttcgtcttatt 63
>RF01058;MIR806;AAAA02024901.1/17755-17517 39946:Oryza sativa Indica
Group
Length = 239
Score = 180 bits (91), Expect = 6e-45
Identities = 158/179 (88%), Gaps = 1/179 (0%)
Strand = Plus / Minus
Query: 12 ctccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgt 71
||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 236 ctccctccgtttctaaatatttgacactattgactttttagcacatatttgaccgttcgt 177
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatatttaaca 131
|||||||||| | |||||||||||||||| ||||| |||| || || |||||||||||
Sbjct: 176 cttattcaaaaacttttgtgaaatatgtaatactatatgtatatataagtatatttaaca 117
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacgaat 189
||||||||||||||| | ||||||| ||||||||||| |||||||| |||| |||||||
Sbjct: 116 atgaatcaaatgatagggaaagaattaataattactttaattttttgaataggacgaat 58
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||| ||||||| | || || |||||||||| |||||||| ||||
Sbjct: 165 tttttgaataagacgaacggtcaaatatgtgct-aaaaagtcaatagtgtcaaatattta 223
Query: 232 gaaacggatggag 244
|||||||| ||||
Sbjct: 224 gaaacggagggag 236
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 180 bits (91), Expect = 6e-45
Identities = 148/166 (89%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 14 ccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtct 73
||||||||||| |||| ||| ||| ||||||||||||||| ||||||||||| |||||||
Sbjct: 236 ccctccgtttctaaatatttaacaccgttgactttttagctcatgtttgaccattcgtct 177
Query: 74 tattcaaacaaatttgtgaaatatgtaaaact--atgtgtacatgaaaatatatttaaca 131
|||| ||| | |||||||||||||||||||| |||| ||||| ||| |||||||||||
Sbjct: 176 tatttaaaaacttttgtgaaatatgtaaaactacatgtatacataaaagtatatttaaca 117
Query: 132 atgaatcaaatgatatgaaaagaataaataattacttaaatttttt 177
||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 116 atgaatcaaatgatagaaaaagaattaataattacttaaatttttt 71
Score = 63.9 bits (32), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| ||||||||||||||||||||| | | ||||||||||||||||| ||| ||||
Sbjct: 167 tttttaaataagacgaatggtcaaacatg-agctaaaaagtcaacggtgttaaatattta 225
Query: 232 gaaacgga 239
||||||||
Sbjct: 226 gaaacgga 233
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 actccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcg 70
|||| ||||||||| |||| |||||| || |||||||||| | || |||||| ||||
Sbjct: 3 actctctccgtttctaaatatttgacgtcattgacttttttaaatatatttgacagttca 62
Query: 71 tcttattcaaa 81
|||||||||||
Sbjct: 63 tcttattcaaa 73
>RF01058;MIR806;AAAA02026300.1/2718-2486 39946:Oryza sativa Indica
Group
Length = 233
Score = 178 bits (90), Expect = 3e-44
Identities = 166/189 (87%), Gaps = 3/189 (1%)
Strand = Plus / Minus
Query: 13 tccctccgtttcaaaatgtttgacatcgttgac-tttttagcacatgtttgaccgttcgt 71
|||||||||||| |||| ||||||| |||| | ||||||| |||||||||| |||||||
Sbjct: 229 tccctccgtttctaaatatttgacaccgttcaaatttttagtacatgtttgatcgttcgt 170
Query: 72 cttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatttaa 129
| |||||||| | ||| |||||||||||||| ||| |||| ||| ||||||||||||
Sbjct: 169 cctattcaaaaacttttatgaaatatgtaaaattatatgtatacatataaatatatttaa 110
Query: 130 caatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacgaat 189
||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 109 caatgaatcaaatgataggaaaagaattaataattacttaatttttttaataagacgaat 50
Query: 190 ggtcaaaca 198
| |||||||
Sbjct: 49 gatcaaaca 41
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 231
||||| |||| |||||| | ||||||| ||||| |||| | |||||||||||| ||||
Sbjct: 158 tttttgaataggacgaacgatcaaacatgtactaaaaatttgaacggtgtcaaatattta 217
Query: 232 gaaacgga 239
||||||||
Sbjct: 218 gaaacgga 225
>RF01058;MIR806;AAAA02019727.1/42626-42864 39946:Oryza sativa Indica
Group
Length = 239
Score = 178 bits (90), Expect = 3e-44
Identities = 182/209 (87%), Gaps = 4/209 (1%)
Strand = Plus / Minus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
|||| |||||| |||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 224 aaatatttgacgtcgttgactttttaaaacatgtttgaccattcgtcttattcaaaaaat 165
Query: 86 tttgtgaaatatgtaaaac--tatgtgtacatgaaaatatatttaacaatgaatcaaatg 143
|||||||| | |||||||| ||||| ||||| ||| ||||||||| ||| |||||||||
Sbjct: 164 tttgtgaattgtgtaaaactatatgtatacataaaagtatatttaataataaatcaaatg 105
Query: 144 atatgaaaagaataaataattacttaaatttttt-aataagacgaatggtcaaacacgta 202
|| ||||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |
Sbjct: 104 gtaggaaaagaattaataattacttaatttttttaaataagacgaacggtcaaata-att 46
Query: 203 cttaaaaagtcaacggtgtcaaacatttt 231
||||||||||||||||||||||||||||
Sbjct: 45 tttaaaaagtcaacggtgtcaaacatttt 17
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 25 aaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaa 84
||||||||||||| ||||||||||||| | | ||||||||||||||||||| ||| ||
Sbjct: 17 aaaatgtttgacaccgttgactttttaaaaattatttgaccgttcgtcttatttaaaaaa 76
Query: 85 att 87
|||
Sbjct: 77 att 79
Score = 54.0 bits (27), Expect = 1e-06
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattt 230
||||| ||||||||||||||||||||| || |||||||||||||| |||||| ||||
Sbjct: 167 tttttgaataagacgaatggtcaaacatgt-tttaaaaagtcaacgacgtcaaatattt 224
>RF01058;MIR806;AAAA02028258.1/13016-13265 39946:Oryza sativa Indica
Group
Length = 250
Score = 178 bits (90), Expect = 3e-44
Identities = 188/217 (86%), Gaps = 4/217 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||||| ||||||||| ||||||| | || ||||||||||| || ||||||||||
Sbjct: 250 gtactccctctatttcaaaatatttgacaccattaactttttagcatatatttgaccgtt 191
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtg--tacatgaaaatatatt 126
||||||||||||| | || ||||||||||||||| ||| || ||||| ||||||||||
Sbjct: 190 cgtcttattcaaaaactttcgtgaaatatgtaaaattatatgcctacataaaaatatatt 131
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataagacg 186
||||||||||||||| |||| ||||||||| |||||||| |||||||||| ||||||| |
Sbjct: 130 taacaatgaatcaaacgata-gaaaagaattaataattatttaaatttttgaataagatg 72
Query: 187 aatggtcaaacacgtacttaaaaagtcaacggtgtca 223
|| ||||||||| | | |||||||||||||| ||||
Sbjct: 71 aacggtcaaacatgcgc-taaaaagtcaacggcgtca 36
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 39 cgttgactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 42 cgttgactttttagcgcatgtttgaccgttcatcttattcaaa 84
>RF01058;MIR806;AP003911.3/90546-90311 39947:Oryza sativa Japonica
Group
Length = 236
Score = 178 bits (90), Expect = 3e-44
Identities = 154/173 (89%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
||||||||||||| || |||| |||||| ||||||||||||||||||||||| ||| ||
Sbjct: 236 gtactccctccgtctctaaatatttgacgccgttgactttttagcacatgtttaaccatt 177
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgta--catgaaaatatatt 126
||||||||| ||| | |||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 176 cgtcttattaaaa-acttttgtgaaatatgtaaaactatatgtatacataaaaatatatt 118
Query: 127 taacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaa 179
||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 117 taacaataaatcaaatgataggaaaagaattaatgattacttaaattttttaa 65
Score = 67.9 bits (34), Expect = 7e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 173 tttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttg 232
|||||||||||||||||||| ||||| || | |||||||||||||| |||||| |||| |
Sbjct: 163 tttttaataagacgaatggttaaacatgtgc-taaaaagtcaacggcgtcaaatatttag 221
Query: 233 aaacggatggagta 246
| ||||| ||||||
Sbjct: 222 agacggagggagta 235
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 178 bits (90), Expect = 3e-44
Identities = 151/169 (89%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 33 tgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtga 92
||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 194 tgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaacttttgtga 135
Query: 93 aatatgtaaaac--tatgtgtacatgaaaatatatttaacaatgaatcaaatgatatgaa 150
||||| |||||| ||||| ||||| || ||||||||||||||||| |||||||| |||
Sbjct: 134 aatatataaaactatatgtatacatataagtatatttaacaatgaattaaatgataggaa 75
Query: 151 aagaataaataattacttaaatttttt-aataagacgaatggtcaaaca 198
|||||| ||||||||||||| |||||| ||||||||||| ||| |||||
Sbjct: 74 aagaattaataattacttaatttttttgaataagacgaacggttaaaca 26
Score = 56.0 bits (28), Expect = 3e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 172 ttttttaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtca 223
||||| ||||||||||| ||||||||| || | |||||||||||||||||||
Sbjct: 144 tttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacggtgtca 194
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 atgtttgaccgttcgtcttattcaaacaaatt 87
|||||| ||||||||||||||||||| |||||
Sbjct: 25 atgtttaaccgttcgtcttattcaaaaaaatt 56
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 178 bits (90), Expect = 3e-44
Identities = 163/184 (88%), Gaps = 5/184 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttc 69
||||||||||||||| |||| ||||||| |||||||||||||||||||| || ||||||
Sbjct: 236 tactccctccgtttctaaatatttgacaccgttgactttttagcacatgcttaaccgttt 177
Query: 70 gtcttattcaaacaaa--tttgtgaaatatgtaaaac--tatgtgtacatgaaaatatat 125
|||||||||||| ||| ||| ||||||||||||||| ||||| |||||| || |||||
Sbjct: 176 gtcttattcaaaaaaacttttatgaaatatgtaaaactatatgtatacatgtaagtatat 117
Query: 126 ttaacaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataaga 184
||||||||||||||||||||| || || ||| ||||||||||||| |||||| |||||||
Sbjct: 116 ttaacaatgaatcaaatgataagacaataattaataattacttaatttttttgaataaga 57
Query: 185 cgaa 188
||||
Sbjct: 56 cgaa 53
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacggatggagtat 247
||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 195 taaaaagtcaacggtgtcaaatatttagaaacggagggagtat 237
>RF01058;MIR806;ABRL01002061.1/823-1053 65489:Oryza barthii
Length = 231
Score = 178 bits (90), Expect = 3e-44
Identities = 199/229 (86%), Gaps = 11/229 (4%)
Strand = Plus / Minus
Query: 9 gtactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgtt 68
|||||||| |||||||||||| ||||||| |||||||||||||||| || ||||||| |
Sbjct: 231 gtactcccaccgtttcaaaatatttgacaccgttgactttttagcatat--ttgaccgct 174
Query: 69 cgtcttattcaaacaaatttgtgaaatatgtaaaactatgtgtacatgaaaatatattta 128
||||||| ||| || |||||||||| || ||||||||||||||| ||||||||
Sbjct: 173 tctcttattaaaaaaa--ttgtgaaatac-ta----tatgtgtacatgaaagtatattta 121
Query: 129 acaatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-aataagacga 187
||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 120 acaataaattaaatgatatgaaaagaataaataattatttaaattttttgaataagacga 61
Query: 188 atggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaac 236
|||||||||||||| | |||||||| |||||| |||| ||||||||||
Sbjct: 60 atggtcaaacacgt-cctaaaaagttaacggtaacaaatattttgaaac 13
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 20 gtttcaaaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattca 79
|||||||||| |||| | |||| ||||||||| || ||||||||| |||||||||||||
Sbjct: 13 gtttcaaaatatttgttaccgttaactttttaggacgtgtttgaccattcgtcttattca 72
Query: 80 aa 81
||
Sbjct: 73 aa 74
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtcaaacattttgaaacgg 238
||||||||||||||||||||| ||||||||||||
Sbjct: 189 taaaaagtcaacggtgtcaaatattttgaaacgg 222
>RF01062;MIR812;AP008218.1/21831476-21831647 39947:Oryza sativa
Japonica Group
Length = 172
Score = 176 bits (89), Expect = 1e-43
Identities = 134/148 (90%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaacaaatttgtgaaatatgtaaa 102
|||| ||||| |||||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 1 gactatttagtacatgtttgaccgttcgtcttatttaaaaacttttgtgaaatatgtaaa 60
Query: 103 actatgtg--tacatgaaaatatatttaacaatgaatcaaatgatatgaaaagaataaat 160
| ||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 61 attatatgcctacatgaaaatatatttaacaatgaatcaaatgataggaaaagaattaat 120
Query: 161 aattacttaaattttttaataagacgaa 188
||||| |||||||||| |||||||||||
Sbjct: 121 aattatttaaatttttgaataagacgaa 148
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 43 gactttttagcacatgtttgaccgttcgtcttattcaaa 81
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 172 gactttttagcacatatttaaccgttcgtcttattcaaa 134
>RF01058;MIR806;AAAA02007078.1/19963-20207 39946:Oryza sativa Indica
Group
Length = 245
Score = 176 bits (89), Expect = 1e-43
Identities = 183/213 (85%), Gaps = 6/213 (2%)
Strand = Plus / Minus
Query: 26 aaatgtttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaacaaa 85
||||||||||| |||||||||||||| |||| ||| |||||||||||||||| || |||
Sbjct: 228 aaatgtttgacgtcgttgactttttaaaacatattttaccgttcgtcttattccaaaaaa 169
Query: 86 ----tttgtgaaatatgtaaaactatgtg--tacatgaaaatatatttaacaatgaatca 139
|||||| ||| || |||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 168 actttttgtggaatgtgaaaaactatatgcatacataaaaatatatttaacaataaatca 109
Query: 140 aatgatatgaaaagaataaataattacttaaattttttaataagacgaatggtcaaacac 199
||||||| ||||||||| ||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 108 aatgataagaaaagaattaataattacttaatttttttaataaaacgaacggtcaaacat 49
Query: 200 gtacttaaaaagtcaacggtgtcaaacattttg 232
| ||||||| ||||||| |||||||||||||
Sbjct: 48 ttttttaaaaaatcaacggcgtcaaacattttg 16
>RF01058;MIR806;AAAA02039083.1/458-246 39946:Oryza sativa Indica
Group
Length = 213
Score = 176 bits (89), Expect = 1e-43
Identities = 111/117 (94%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 123 tatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataa 182
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tatttaataatgaatcaaatgatatgaaaagaataaataattacttaaattttttaataa 65
Query: 183 gacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacattttgaaacgga 239
|| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 64 aacaaatgatcaaacacgtactt-aaaagtcaacggtgtcaaacattttaaaacgga 9
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 10 tactccctccgtttcaaaatgttt--gacatcgttgactttttagcacatgtttgaccgt 67
|||||| |||||||| |||||||| |||| |||||| ||||||||| ||||||||||||
Sbjct: 212 tactccttccgtttcgaaatgtttttgacaccgttgattttttagcatatgtttgaccgt 153
Query: 68 tcgtcttattcaaa 81
| ||||||||||||
Sbjct: 152 ttgtcttattcaaa 139
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttcaaaatgtttgacatcgttgactttttagcacatgtttga 63
||||| |||||||| ||||||||||||| ||||||||||| || || |||||||
Sbjct: 2 tactctctccgttttaaaatgtttgacaccgttgacttttaagtacgtgtttga 55
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 205 taaaaagtcaacggtgtc--aaacattttgaaacggatggagtat 247
|||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 169 taaaaaatcaacggtgtcaaaaacatttcgaaacggaaggagtat 213
