miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 246 bits (124), Expect = 1e-64
Identities = 209/241 (86%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||| ||||||||||||| ||||||||||||| | |||||| ||| ||
Sbjct: 1 atactccctccgttttgaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||| | | |||||||||||||| ||||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 120
Query: 139 aaatatattttcatgta--catatagttttacatattttacaaatatttttgaataagac 196
||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 121 aaatatattttcatgtaggcatataattttacatatttcacaaaaatttttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 125 bits (63), Expect = 4e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttca 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||||| ||||||||||||| | |||||||||| ||
Sbjct: 241 atactccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgtt 182
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 181 cgtcttatt 173
>RF01058;MIR806;AC120983.6/32335-32095 39947:Oryza sativa Japonica
Group
Length = 241
Score = 224 bits (113), Expect = 5e-58
Identities = 203/234 (86%), Gaps = 4/234 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccatt 78
|||||||||| ||||||||| |||||||| |||||||||||| ||| ||| ||| ||||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtacgtgtatgatcatt 61
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 121
Query: 139 aaatatattttcatgtacatata--gttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||||||| ||||||||||||||| |||| ||||| |||||| |
Sbjct: 122 aaatatactttcatgtacatatatagttttacatattttataaattttttt-aataagtc 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 250
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 234
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||| |||||||||||||| ||||||||||||| | |||||||||| |||
Sbjct: 240 tactctctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 80 gtcttatt 87
| ||||||
Sbjct: 180 gacttatt 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| | | | ||| || | ||||||||||||||||||||| |||||
Sbjct: 76 tttttgaataagacgaatgatcatacacgtacttaaaaagtcaacggtgtcaaatatttt 17
Query: 242 gaaacggaggaagta 256
||||||||| ||||
Sbjct: 16 aaaacggagggagta 2
>RF01058;MIR806;AAAA02005271.1/7290-7051 39946:Oryza sativa Indica
Group
Length = 240
Score = 218 bits (110), Expect = 3e-56
Identities = 201/235 (85%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||||| ||||| ||||| || ||||| |||||||||| ||||||||||||
Sbjct: 1 atactccctccatttcaaaatatttgaaactgttgattttttagtatgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||||||||||||| |||||||||||||||| | ||
Sbjct: 61 cgtcttatttaaaaaatttaagtaattatttgttcttttcatatcatttgattcattatt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||| ||| |||||||||| |||||| ||||| ||||||||||||||
Sbjct: 121 aaatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 gaacggtcaaatatgtgctaaaaagtcaacagtgtcaaacattttgaaacggagg 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||| ||| |||||||||||||| ||||||||||||| | || ||||||| ||||||
Sbjct: 237 tccctccgtttcaaaatgtttgacactgttgactttttagcacatatttgaccgttcgtc 178
Query: 83 ttatt 87
|||||
Sbjct: 177 ttatt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| | ||||||| ||||| || ||||| ||||||
Sbjct: 75 tttttaaataagacgaatggtcaaacacatactaaaaaatcaacagtttcaaatattttg 16
Query: 243 aaacggaggaagtat 257
||| ||||| |||||
Sbjct: 15 aaatggagggagtat 1
>RF01058;MIR806;AK067104.1/735-978 39947:Oryza sativa Japonica Group
Length = 244
Score = 218 bits (110), Expect = 3e-56
Identities = 174/199 (87%), Gaps = 2/199 (1%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
||||||||| || ||||||||||||||||||||| ||||||||||||||||
Sbjct: 38 gactttttattacgtgtttgaccattcgtcttattaaaaaaatttaagtaattatttatt 97
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtacatat--agttttacat 170
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||
Sbjct: 98 cttttcatatcatttgattcattgtaaaatatattttcatgtacatatatagttttacat 157
Query: 171 attttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtg 230
||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 158 attttacaaattattttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtg 217
Query: 231 tcaaacattttgaaacgga 249
|||||||||||||||||||
Sbjct: 218 tcaaacattttgaaacgga 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||| |||||||||||||| ||||||||||||| | |||||||||| ||
Sbjct: 244 atactccatccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgtt 185
Query: 79 cgtcttatt 87
||||||||
Sbjct: 184 tgtcttatt 176
>RF01058;MIR806;AAAA02020371.1/11235-10996 39946:Oryza sativa Indica
Group
Length = 240
Score = 218 bits (110), Expect = 3e-56
Identities = 205/239 (85%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||| |||||||| || |||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttaactttttaatacgtgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|| ||||| |||||||||||||||| |||||||||||||||| |||||
Sbjct: 62 gttttattcaaatcatttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||| |
Sbjct: 122 aatatattttcatgtacacatatagttttacatatttcacaatt-tttttgaataagatg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||| ||| |||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 181 aacggtcaaatatgtgctaaaaaatcaacggtgtcgaacattttaaaacggaggaagta 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 244
||||||||| ||||| ||| ||||| || |||||||| |||||||||||||||||||||
Sbjct: 73 tttgaataaaacgaatggtcaaacacgtattaaaaagttaacggtgtcaaacattttgaa 14
Query: 245 acggaggaagta 256
||||||| ||||
Sbjct: 13 acggagggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||| ||||| |||||||||||| ||||| ||||| ||||||| | || ||||||| |||
Sbjct: 239 tacttcctccgttttaaaatgttcgacaccgttgattttttagcacatatttgaccgttc 180
Query: 80 gtcttatt 87
|||||||
Sbjct: 179 atcttatt 172
>RF01058;MIR806;AACV01016951.1/67663-67426 39947:Oryza sativa
Japonica Group
Length = 238
Score = 214 bits (108), Expect = 5e-55
Identities = 196/228 (85%), Gaps = 4/228 (1%)
Strand = Plus / Plus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnn 90
|||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct: 12 ttttaaaatgtttgacacagttgacttgttagtatgtgtttgaccattcgtcttatctaa 71
Query: 91 nnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttc 150
|||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 72 aaaaagtaagtaattatttattctttttatatcatttgattcactgttaaatatactttc 131
Query: 151 atgtaca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaac 208
||||||| |||||||||||| |||| | || | |||| ||||||||||||||||||||
Sbjct: 132 atgtacacatatagttttacacatttcataattttttt--aataagacgaacggttaaac 189
Query: 209 atgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 190 atgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 237
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||||||||||||| | |||||| ||| |||
Sbjct: 237 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgttc 178
Query: 80 gtcttatt 87
||||||||
Sbjct: 177 gtcttatt 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 190 ataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 248
|||||||||| ||| ||||| | |||| |||||||| |||||||||||||| ||||||
Sbjct: 67 ataagacgaatggtcaaacacatactaacaagtcaactgtgtcaaacattttaaaacgg 9
>RF01058;MIR806;AP003233.3/36507-36268 39947:Oryza sativa Japonica
Group
Length = 240
Score = 208 bits (105), Expect = 3e-53
Identities = 185/214 (86%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgacttttta-gtatatgtttgaccattcgtcttattnnnnnn 93
|||||||||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 16 aaaatgtttgacaccgttgactttttaagtacgtgtttgaccattcgtcttatttaaaaa 75
Query: 94 ntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatg 153
||||| |||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 76 atttaattaattatttattcttttcatatcatttgattcattgttaaatatattttcata 135
Query: 154 taca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatg 211
|||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||
Sbjct: 136 tacacatatagttttacatatttcacaaaaaaaattgaataagacgaacggttaaacatg 195
Query: 212 tgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||| |||||||||||||||||||||||||
Sbjct: 196 tgctaaaatgtcaacggtgtcaaacattttgaaa 229
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||| ||||||||||| ||| ||||| || || ||||||||||||||||||||||||||
Sbjct: 75 tttttaaataagacgaatggtcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 16
Query: 242 gaa 244
|||
Sbjct: 15 gaa 13
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 24 ccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtct 83
||||| |||| |||||||||||||| |||||| |||||| | |||||| ||| |||||||
Sbjct: 236 ccctcaatttcaaaatgtttgacaccgttgacattttagcacatgtttaaccgttcgtct 177
Query: 84 tatt 87
||||
Sbjct: 176 tatt 173
>RF01058;MIR806;AACV01006799.1/1802-1563 39947:Oryza sativa Japonica
Group
Length = 240
Score = 204 bits (103), Expect = 5e-52
Identities = 204/240 (85%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||| | ||| |||||||||||| |||||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacgccgttaactttttagtatgtgtttgactattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattatttaatctttttatatcatttgattcattgttt 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 122 aatatattttcatgtacacatatagttttacatattttataaattttttt-aataagacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||||| |||||||||||||| ||||||||| || ||||||||| ||||||||| |||||
Sbjct: 181 aacggccaaacatgtgctaaagagtcaacggcgttaaacattttaaaacggagggagtat 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| || ||||| | ||||||||| ||||| |||||||||||||
Sbjct: 75 ttttttaataagacgaatagtcaaacacatactaaaaagttaacggcgtcaaacattttg 16
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 15 aaacggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||||||||||||| || | ||||||| ||||| | ||||||| || ||
Sbjct: 240 atactccctccgttttaaaatgtttaacgccgttgactctttagcacatgtttggccgtt 181
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 180 cgtcttatt 172
>RF01058;MIR806;AAAA02007548.1/34294-34056 39946:Oryza sativa Indica
Group
Length = 239
Score = 202 bits (102), Expect = 2e-51
Identities = 201/235 (85%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| ||||| |||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 1 atactcccttcatttcaaaatgtttgacaccgttcactttttagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 61 cgtcttattcaacaaatttaagtaattatttattctttt-atatcatttgattcattgtt 119
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||||||||||||||| ||||||||||||||||| |||| | ||||| ||||||||
Sbjct: 120 aaatatattttcatgtacacatatagttttacatatttcacaatttttttt-aataagac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||||||||||||| | ||||||||| |||||| ||||| |||||||| ||||||
Sbjct: 179 gaacggttaaacatatactaaaaagttaacggtatcaaatattttgaagcggagg 233
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 186 ttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||||||| ||| ||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatggtcaaacacgtactaaaaagtgaacggtgtcaaacattttgaaa 13
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||| ||||| || ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 223 aaaatatttgataccgttaactttttagtatatgtttaaccgttcgtcttatt 171
>RF01058;MIR806;AACV01023868.1/4734-4496 39947:Oryza sativa Japonica
Group
Length = 239
Score = 200 bits (101), Expect = 7e-51
Identities = 204/241 (84%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacatcgttgactttttaatatatgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
|||||||| |||||||||||||||| |||||||||| ||||| ||||
Sbjct: 61 tgtcttatttaaaaaatttaagtaattatttattcttttcatatcattttattcattgtt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
|| |||| ||| || |||| ||||||||||||||||| |||| | |||| ||| ||||
Sbjct: 121 aattatacttttatatacacatatagttttacatatttcacaattttttt--aatgagac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 179 gaacggttaaacatgtgctaaaaagtcaacggtgttaaatattttgaaacggaggtagta 238
Query: 257 t 257
|
Sbjct: 239 t 239
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| || ||| |||||| | ||||||||||||| ||||||||||||||
Sbjct: 75 tttttaaataagacaaatggtcaaacatatattaaaaagtcaacgatgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| ||| ||||| ||| |||| ||||||||||||| | |||||| ||| ||
Sbjct: 239 atactacctccgtttcaaaatatttaacaccgttgactttttagcacatgtttaaccgtt 180
Query: 79 cgtct 83
|||||
Sbjct: 179 cgtct 175
>RF01058;MIR806;AACV01020143.1/22321-22561 39947:Oryza sativa
Japonica Group
Length = 241
Score = 196 bits (99), Expect = 1e-49
Identities = 202/240 (84%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgtttactttttagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||| ||||||||| ||||| |||||||||| ||||
Sbjct: 61 cgtcttattcaaaaaatttaacaaattatttattattttcatattatttgattcattgtt 120
Query: 139 aaatatattttcatgtacatata--gttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||| ||| ||||||||||||| |||| | ||||||||||||||
Sbjct: 121 aaatatactttcatgtacaaatatggttttacatatttcacaattttttttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||| ||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||
Sbjct: 181 gaatggtgaaacatgtgctaaaaagtgaacggtgcataacattttgaaacggagggagta 240
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| || ||||||||| |||||||||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactaaaaagtaaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||| ||| ||| ||||||||| | |||||| |||||||
Sbjct: 240 tactccctccgtttcaaaatgttatgcaccgttcactttttagcacatgtttcaccattc 181
Query: 80 gtcttatt 87
||||||||
Sbjct: 180 gtcttatt 173
>RF01058;MIR806;AACV01000287.1/26012-26251 39947:Oryza sativa
Japonica Group
Length = 240
Score = 196 bits (99), Expect = 1e-49
Identities = 203/240 (84%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 2 tactccatccatttcataatgtttgacaccgttgactttttagtacgtgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| || ||| ||||||||| | |||
Sbjct: 62 gtcttatttaaaaaatttaagtaattatttattcttttcacatcgtttgattcattatta 121
Query: 140 aatatattttcatgtacata--tagttttacatattttacaaatatttttgaataagacg 197
|||||||||||||||||| | ||||||||||||||| ||| || |||||||||||| |
Sbjct: 122 aatatattttcatgtacacacatagttttacatatttcacagattcttttgaataagatg 181
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||
Sbjct: 182 aacggttaaacatgtgctaaaaagtcaacaatgtcaaaca-tttgatacggagggagtat 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 75 tttttaaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattatg 16
Query: 243 aaa 245
|||
Sbjct: 15 aaa 13
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||| ||||||||||||| | |||||| ||| ||| |||||||
Sbjct: 224 aaatgtttgacattgttgactttttagcacatgtttaaccgttcatcttatt 173
>RF01058;MIR806;AACV01018840.1/8254-8495 39947:Oryza sativa Japonica
Group
Length = 242
Score = 196 bits (99), Expect = 1e-49
Identities = 200/236 (84%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaa-tgtttgacacggttgactttttagtatatgtttgaccat 77
|||||| |||| |||||||| |||||||||| ||||||||| ||||| |||||||||||
Sbjct: 1 atactctctccgttttaaaaatgtttgacaccgttgactttctagtacgtgtttgaccat 60
Query: 78 tcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgt 137
|| || |||| ||||| ||| |||||| |||||||||||||||| |||
Sbjct: 61 tcatcctattcaaaaaatttaaataactatttattattttcatatcatttgattcattgt 120
Query: 138 taaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataaga 195
|||||||| ||||||||||| ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 121 taaatatactttcatgtacacatatagttttacatatttcacaaacttttatgaataaga 180
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||
Sbjct: 181 cgaacggttaaacatgtgttaaaaagtcaacggtgttaaacattttgaaatggagg 236
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||||||||||| ||||||||| |||| |||||||||||| | |||||| ||| |||||
Sbjct: 239 ctccctccatttcaaaatgtttaacaccgttgactttttaacacatgtttaaccgttcgt 180
Query: 82 cttatt 87
||||||
Sbjct: 179 cttatt 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||| || ||| ||| ||||| || ||| ||||||||||||||||||||||||
Sbjct: 76 tttttgaataggatgaatggtcaaacacgtactagaaagtcaacggtgtcaaacatttt 18
>RF01058;MIR806;AACV01019387.1/21073-21305 39947:Oryza sativa
Japonica Group
Length = 233
Score = 192 bits (97), Expect = 2e-48
Identities = 182/213 (85%), Gaps = 4/213 (1%)
Strand = Plus / Plus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaag 100
|||||||| |||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 23 tttgacaccgttgactttttaatacgtgtttgaccattcgtcttatttaaaaaatttaaa 82
Query: 101 taattatttannnnnnncatatcatttgattcactgttaaatatattttcatgtaca--t 158
|||||||||| |||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 83 taattatttatcctcttcatatcatttgattcattgttaaatatactttcatgtacacat 142
Query: 159 atagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgctaaa 218
|||||||||||||||| |||| | |||| ||||||| || |||| ||||||||||||||
Sbjct: 143 atagttttacatatttcacaattttttt--aataagatgagcggtcaaacatgtgctaaa 200
Query: 219 aagtcaacggtgtcaaacattttgaaacggagg 251
|||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcaacggtgtcaaacattttgaaacggagg 233
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 25 cctccattttaaaatgtttgacacggttgactttttagtatatgtttgacc 75
||||| ||| |||||||||||||| ||||||||||||| | ||||||||||
Sbjct: 233 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgacc 183
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||||||||| ||| ||||| || |||||||||||||||||||||
Sbjct: 75 tttttaaataagacgaatggtcaaacacgtattaaaaagtcaacggtgtcaaa 23
>RF01058;MIR806;AP002855.2/37713-37949 39947:Oryza sativa Japonica
Group
Length = 237
Score = 192 bits (97), Expect = 2e-48
Identities = 197/234 (84%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||| || ||| ||||| ||||| || ||||||| |||| || |||||||||||||
Sbjct: 1 atactccccccgtttcaaaatatttgaaaccgttgactgtttaatacatgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
|||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 61 tgtcttatttaaaaagtttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtacatatag--ttttacatattttacaaatatttttgaataagac 196
||||||||||| ||| ||||||| |||||||||||| ||||| | |||||||||||||
Sbjct: 121 aaatatatttttatgcacatatataattttacatatttcacaaaaaattttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 250
||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 gaatggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggag 234
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 26 ctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||| ||| ||||| |||||||| ||||||||||||| | || |||||||||||||||||
Sbjct: 234 ctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccattcgtctta 175
Query: 86 tt 87
||
Sbjct: 174 tt 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| || ||| |||||||| |||| |||||||||| ||||| ||||||
Sbjct: 75 tttttaaataagacaaatggtcaaacatgtattaaacagtcaacggtttcaaatattttg 16
Query: 243 aaacggaggaagtat 257
|||||| || |||||
Sbjct: 15 aaacggggggagtat 1
>RF01058;MIR806;AAAA02034877.1/4103-3864 39946:Oryza sativa Indica
Group
Length = 240
Score = 190 bits (96), Expect = 7e-48
Identities = 197/233 (84%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||| | ||||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 1 atactccctccatccttaaatgtttgacaccgttgactttttaaaatatgtttgaccgtt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
| ||| ||| ||||||||| |||||| ||||||||||||||| ||||
Sbjct: 61 cttctcattcaaacaatttaagtaactatttattctttttatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtac--atatagttttacatattttacaaatatttttgaataagac 196
||||||| |||||||||| |||||||||||||||||| | | || ||||| ||||||||
Sbjct: 121 aaatatactttcatgtacccatatagttttacatatttcatagattttttt-aataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaacggttaaatatatgctaaaaagtcaacggtgtcaaacattttgaaacgga 232
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||| ||| ||| |||||||||||||| ||||||||||||| |||| ||| ||| |||
Sbjct: 239 tactccttccgtttcaaaatgtttgacaccgttgactttttagcatatatttaaccgttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||| ||| ||||||| |||||| | ||||||||||||||||||||||||||
Sbjct: 73 tttgaatgagaagaacggtcaaacatattttaaaaagtcaacggtgtcaaacattt 18
>RF01058;MIR806;AC144491.1/84155-84398 39947:Oryza sativa Japonica
Group
Length = 244
Score = 190 bits (96), Expect = 7e-48
Identities = 166/193 (86%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 52 tgtttgaccattcgtcttattcaaaaaatttaattaattatttattcttttcatatcatt 111
Query: 127 tgattcactgttaaatatattttcatgtaca--tatagttttacatattttacaaatatt 184
||||||| ||||||||||| ||||||||||| ||||||||||||||||| | || | ||
Sbjct: 112 tgattcattgttaaatatactttcatgtacacatatagttttacatatttcataattttt 171
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 244
||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||
Sbjct: 172 tttgaataagacgaacggtcaaacatgtgttaaaaagtcaacggtgtcgaacattttgaa 231
Query: 245 acggaggaagtat 257
||||||| |||||
Sbjct: 232 acggagggagtat 244
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||| ||||| |||||||||||| | |||||||||| ||
Sbjct: 244 atactccctccgtttcaaaatgttcgacaccgttgactttttaacacatgtttgaccgtt 185
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 184 cgtcttatt 176
>RF01058;MIR806;AP008217.1/20608272-20608042 39947:Oryza sativa
Japonica Group
Length = 231
Score = 190 bits (96), Expect = 7e-48
Identities = 182/213 (85%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnn 90
||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 4 ttttaaaatatttgacaccgttgactttttagtacgtgtttgaccattcgtcttattaaa 63
Query: 91 nnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttc 150
|||||||||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 64 aaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttc 123
Query: 151 atg--tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaac 208
||| |||||||| |||||||||||||| ||| ||||| ||||||||||| ||| ||||
Sbjct: 124 atgtatacatataattttacatatttta-taattttttttaataagacgaatggtcaaac 182
Query: 209 atgtgctaaaaagtcaacggtgtcaaacatttt 241
||||| |||||| ||||||||||||||||||||
Sbjct: 183 atgtgttaaaaattcaacggtgtcaaacatttt 215
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| || |||||||||||||||||||||| |||||
Sbjct: 66 ttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaatatttta 7
Query: 243 aaacgg 248
||||||
Sbjct: 6 aaacgg 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 219 ttttaaaatgtttgacaccgttgaatttttaacacatgtttgaccattcgtcttatt 163
>RF01058;MIR806;AP005878.2/90818-90583 39947:Oryza sativa Japonica
Group
Length = 236
Score = 190 bits (96), Expect = 7e-48
Identities = 184/214 (85%), Gaps = 4/214 (1%)
Strand = Plus / Plus
Query: 38 atgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnnttt 97
||||||||||| ||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 20 atgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattaaaaaaattt 79
Query: 98 aagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgtaca 157
||| ||||||||| |||||||||||||| | ||||||||||| |||||||||||
Sbjct: 80 aagaaattatttatttttt-catatcatttgatttattgttaaatatactttcatgtaca 138
Query: 158 --tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgct 215
|||||||||| |||||| |||||| ||||| ||||||||||||||| || ||||||||
Sbjct: 139 catatagttttatatatttcacaaattttttttaataagacgaacggtcaa-catgtgct 197
Query: 216 aaaaagtcaacggtgtcaaacattttgaaacgga 249
|||||||||||||||||||| |||||||||||||
Sbjct: 198 aaaaagtcaacggtgtcaaatattttgaaacgga 231
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| || ||||||||||||||||||||||||| |||
Sbjct: 75 ttttttaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacatcttg 16
Query: 243 aaac 246
||||
Sbjct: 15 aaac 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||| ||| ||| ||||| |||||||| ||||||||||||| | ||| |||||| |||||
Sbjct: 236 ctccatccgtttcaaaatatttgacaccgttgactttttagcacatg-ttgaccgttcgt 178
Query: 82 cttatt 87
||||||
Sbjct: 177 cttatt 172
>RF01058;MIR806;AP008210.1/19746884-19747123 39947:Oryza sativa
Japonica Group
Length = 240
Score = 190 bits (96), Expect = 7e-48
Identities = 197/232 (84%), Gaps = 5/232 (2%)
Strand = Plus / Plus
Query: 29 cattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattn 88
||||| ||||| |||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 11 catttcaaaatatttgacaccgttgactttttagtatatgtttaaccatttgtcttattc 70
Query: 89 nnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattt 148
|||||||||||||||| |||||||||||||||| ||||||||||| ||
Sbjct: 71 aaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactt 130
Query: 149 tcatg--tacatatagttttacatattttacaaatatttttgaataagacgaacggttaa 206
||||| |||||||||||||| |||||| ||| ||||| ||||||||||||| ||||
Sbjct: 131 tcatgtatacatatagttttatatatttcgcaa--tttttttaataagacgaacgattaa 188
Query: 207 acatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||| || ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 189 acataggcttaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
|||||||||||||| || |||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 75 tttttgaataagacaaatggttaaacatatactaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaa 245
|||
Sbjct: 15 aaa 13
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta 61
||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttgacttttta 198
>RF01058;MIR806;AAAA02006649.1/21379-21617 39946:Oryza sativa Indica
Group
Length = 239
Score = 188 bits (95), Expect = 3e-47
Identities = 203/240 (84%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaacttttta-tacgtgtttgaccatt 59
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||| ||||| | || ||||||||| |||||||||| ||| | ||||
Sbjct: 60 cgttttatttaaaaaaatcaaataattatttgttcttttcatatcatttaatttattgtt 119
Query: 139 aaatatattttcatgtacatatagttttacatattttacaaatatttttgaata--agac 196
||||||| ||| ||||||| ||||||||||||||||||||| | |||||||||| ||||
Sbjct: 120 aaatatacttttatgtacacatagttttacatattttacaatt-tttttgaatataagac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 179 aaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaatggagggagta 238
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| |||||||||||||| ||||||||||||| | |||||| ||| ||
Sbjct: 238 tactccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgttt 179
Query: 80 gtcttat 86
|||||||
Sbjct: 178 gtcttat 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||| |||||||||||||||||| ||| ||||| |||||
Sbjct: 43 taaaaagttaacggtgtcaaacattttaaaatggagggagtat 1
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 188 bits (95), Expect = 3e-47
Identities = 202/240 (84%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| ||| || | ||||||||||||||| ||||||||||||||
Sbjct: 2 tactccctccgttttaaaatatttaacgccgttgactttttagtacatgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| ||||| |||||||||| ||||||||||||| | | |||
Sbjct: 62 gtcttattaaaaaaatttaactaattatttattctttttatatcatttgatttattatta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||
Sbjct: 122 aatatactttcatttacacatatagttttacatatttcacaaattttttt-aataagacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|| || ||||||||||||||| || |||||||||||||||||| |||||||||||||||
Sbjct: 181 aattgtcaaacatgtgctaaaaggttaacggtgtcaaacattttaaaacggaggaagtat 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| |||||||| ||||||||||||||| || ||| |||||
Sbjct: 75 ttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggcgttaaatatttta 16
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 15 aaacggagggagta 2
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| |||||||||||||||||| ||| || |||||| | ||||||||| |||
Sbjct: 240 atacttcctccgttttaaaatgtttgacaccgttaaccttttagcacatgtttgacaatt 181
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 180 cgtcttatt 172
>RF01058;MIR806;AC097280.8/97040-96802 39947:Oryza sativa Japonica
Group
Length = 239
Score = 186 bits (94), Expect = 1e-46
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
| ||||||| |||||||||||||||| |||||||||| ||||| ||||
Sbjct: 61 catcttattcaaaaagtttaagtaattatttattcttttcatatcatttaattcattgtt 120
Query: 139 aaatatattttcatgtacatatagttttacatattttacaaatatttttgaataagacga 198
||||||| ||||||||||| ||| |||||||||||| || ||| |||| ||||||||||
Sbjct: 121 aaatatactttcatgtacacataattttacatatttcactaattattttaaataagacga 180
Query: 199 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 250
| ||||||| |||||||||||| | |||||||||||| ||||| ||||||||
Sbjct: 181 atggttaaatatgtgctaaaaaattaacggtgtcaaatattttaaaacggag 232
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| ||| ||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 75 tttttgaataagatgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||||||||| |||||||| ||| | ||||||| | || ||| |||||||
Sbjct: 238 tactcactccgttttaaaatatttgacaccgttaattttttagcacatatttaaccattc 179
Query: 80 gtcttatt 87
||||||||
Sbjct: 178 gtcttatt 171
>RF01058;MIR806;AP008211.1/24437307-24437067 39947:Oryza sativa
Japonica Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 196/234 (83%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||||||||||||||| || ||||||||||||||| ||||| | |||||
Sbjct: 2 tactctctccgttttaaaatgtttgatacagttgactttttagtacgtgtttaatcattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|| ||||| || ||||||||||||| || ||||||||||| | |||||
Sbjct: 62 gttttattcaaaaaattaaagtaattatttattcttttcacatcatttgatttattgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||||| ||| |||||||||||||||| ||||| |||||| ||||||| |
Sbjct: 122 aatatactttcatgtacacaaatagttttacatatttcacaaaaatttttaaataagatg 181
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 182 aacggtcaaatatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagg 235
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||| ||||| | ||||||| || ||||||||||||| || |||||||||||
Sbjct: 75 tttttgaataaaacgaatgattaaacacgtactaaaaagtcaactgtatcaaacatttta 16
Query: 243 aaacggag 250
||||||||
Sbjct: 15 aaacggag 8
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||||||| ||| ||||| |||||||| ||||||||||||| | || ||||||| ||| |
Sbjct: 238 ctccctccgtttcaaaatatttgacaccgttgactttttagcacatatttgaccgttcat 179
Query: 82 cttatt 87
||||||
Sbjct: 178 cttatt 173
>RF01058;MIR806;AAAA02029104.1/2707-2467 39946:Oryza sativa Indica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 185/218 (84%), Gaps = 3/218 (1%)
Strand = Plus / Plus
Query: 26 ctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||||||| ||||| |||||||| || ||||||||| ||| |||||||||||||||||||
Sbjct: 8 ctccatttcaaaatatttgacaccgtggactttttaatatgtgtttgaccattcgtctta 67
Query: 86 ttnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatata 145
|| |||||||||||||||| ||||||||||||| | ||||||||| |
Sbjct: 68 ttcaaaaaatttaagtaattatttattttttt-atatcatttgatttattgttaaataaa 126
Query: 146 ttttcatgtaca--tatagttttacatattttacaaatatttttgaataagacgaacggt 203
||||||||||| |||| |||||||||||| |||||| || ||||||||||||||||||
Sbjct: 127 ctttcatgtacacatataattttacatatttcacaaattttattgaataagacgaacggt 186
Query: 204 taaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||||| |||||||||||| |||||
Sbjct: 187 taaacatgtgctaaaaagttaacggtgtcaaatatttt 224
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| | ||||||||| ||||||||||| ||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacatattaaaaagtccacggtgtcaaatattttg 16
Query: 243 aaacggag 250
||| ||||
Sbjct: 15 aaatggag 8
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||| |||||||| ||| ||||||||| | |||||| ||| |||||||||||
Sbjct: 224 aaaatatttgacaccgttaactttttagcacatgtttaaccgttcgtcttatt 172
>RF01058;MIR806;AAAA02026239.1/51617-51378 39946:Oryza sativa Indica
Group
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 190/225 (84%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
||||| |||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct: 17 aaaatatttgacaccgttgactttttagcacgtgtttgaccattcgtcttattcaaaaaa 76
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||
Sbjct: 77 tttaagtaattatttattcttttcatctcatctgattcattgttaaatatattttcatgt 136
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| ||||||||||||||||| |||| | ||||| | ||||| ||| ||| |||||| |
Sbjct: 137 acacatatagttttacatatttcacaatt-tttttaactaagatgaatggtcaaacatat 195
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 196 gctaaaaagtcaacggcgtcaaacattttgaaacggagggagtat 240
Score = 101 bits (51), Expect = 5e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||| | ||||||||||||| |||||||||||||||
Sbjct: 240 atactccctccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccatt 181
Query: 79 cgtctta 85
| |||||
Sbjct: 180 catctta 174
>RF01058;MIR806;AC060755.9/90452-90213 4530:Oryza sativa (rice)
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 196/233 (84%), Gaps = 3/233 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccatttcaaaatatttgataccgttgactttttagtatatgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
||||||| |||||||||||||||| ||||||||| |||| | |||||
Sbjct: 62 atcttatttaaaaaatttaagtaattatttattttttccatatcattcgattaattgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||| || | |||||||||||||||||||| |||| | ||||| ||||||||
Sbjct: 122 aatatacttttatatacacatatagttttacatatttcacaagt-ttttttaataagaca 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 250
|| ||| |||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 181 aatggtcaaacatatgctaaaaagtcaatggtgtcaaacattttaaaacggag 233
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 240 atactctctccgttttaaaatgtttgacaccattgactttttagcatatgtttgaccatt 181
Query: 79 cgtcttatt 87
||||||||
Sbjct: 180 tgtcttatt 172
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| ||| |||||| | |||||||||||||||| ||||| ||||||
Sbjct: 75 tttttaaataagatgaatggtcaaacatatactaaaaagtcaacggtatcaaatattttg 16
Query: 243 aaacggaggaagta 256
||| ||||| ||||
Sbjct: 15 aaatggagggagta 2
>RF01058;MIR806;AP005190.3/32973-32734 39947:Oryza sativa Japonica
Group
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 199/238 (83%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||||| ||| |||||||||||||| ||| | ||| |||| ||||| |||||||
Sbjct: 2 tactccctctgtttcaaaatgtttgacaccgttaattttgtagtgcgtgttttaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||| ||| |||||||||||||||| |||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattacttattcttctcatatcatttgattcattgtta 121
Query: 140 aatatattttcatgtacatatagttttacatattttacaaa-tatttttgaataagacga 198
|||||||||||||||||| |||||| || |||||| | ||| | ||||| ||||||||||
Sbjct: 122 aatatattttcatgtacacatagttgtatatatttcataaattttttttaaataagacga 181
Query: 199 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 182 acagtcaaacatgtgctaaagagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||||||| ||||| | ||||||||| |||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactctttagcacatgtttgactgttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| | ||| ||| | |||||||||||||||||||
Sbjct: 75 ttttttaataagacgaatggtaaaacacgcactacaaaattaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagta 256
|||| |||| ||||
Sbjct: 15 aaacagagggagta 2
>RF01058;MIR806;AP008207.1/2117292-2117533 39947:Oryza sativa
Japonica Group
Length = 242
Score = 182 bits (92), Expect = 2e-45
Identities = 199/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||||||| |||||||||||||| |||||||||||| | |||||||||| ||||||
Sbjct: 5 tccctccatttcaaaatgtttgacactattgactttttagcacatgtttgaccgttcgtc 64
Query: 83 ttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaat 142
||||| |||||||||||||||| |||||||||||||||| | ||||||
Sbjct: 65 ttattcaaaaaatttaagtaattatttattattttcatatcatttgattcattattaaat 124
Query: 143 atattttcatgt--acatatagttttacatattttacaaatatttttgaataagacgaac 200
||| |||||| | |||||||||||||||||||| | ||| |||||||||||||| ||
Sbjct: 125 atactttcatctacacatatagttttacatatttcataaaattttttgaataagacaaat 184
Query: 201 ggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||| |||||||| | ||||||||||||||||||||| |||||||||| |||| ||||
Sbjct: 185 ggtcaaacatgtacttaaaaagtcaacggtgtcaaatattttgaaacagagggagta 241
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaatagtgtcaaacattttg 16
Query: 243 aaacggagg 251
||| |||||
Sbjct: 15 aaatggagg 7
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccatt 78
||||||||| ||| ||||| |||||||| ||||||||||| |||| |||||||||||||
Sbjct: 241 tactccctctgtttcaaaatatttgacaccgttgactttttaagtacatgtttgaccatt 182
Query: 79 cgtcttatt 87
||||||||
Sbjct: 181 tgtcttatt 173
>RF01058;MIR806;AP005871.3/135385-135145 39947:Oryza sativa Japonica
Group
Length = 241
Score = 182 bits (92), Expect = 2e-45
Identities = 177/209 (84%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
|||||||||||||| || | |||| |||| |||||||||||||| |||||||
Sbjct: 17 aaaatgtttgacactattaatttttaagtacatgtttgaccattcatcttattaaaaaaa 76
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
| ||||||||||||| |||||||||||||||| | |||||||||||||||| |
Sbjct: 77 atcaagtaattatttattcctttcatatcatttgattcattattaaatatattttcatat 136
Query: 155 acata--tagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 137 acacacatagttttacatatttcacaaatatttttgaataagacgaacggtcaaacatgt 196
Query: 213 gctaaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||||||||| |||||
Sbjct: 197 gctaaaaagtcaacggtgtcaaatatttt 225
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| |||||||||| |||||||| ||||||||||||| | |||||||||| ||
Sbjct: 241 atactccctctattttaaaatatttgacaccgttgactttttagcacatgtttgaccgtt 182
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 181 cgtcttatt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| ||| |||||||| || |||| | || |||||||||||||||
Sbjct: 75 ttttttaataagatgaatggtcaaacatgtacttaaaaattaatagtgtcaaacattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AACV01020376.1/3944-4183 39947:Oryza sativa Japonica
Group
Length = 240
Score = 182 bits (92), Expect = 2e-45
Identities = 202/241 (83%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||||||||||||||||| |||| |||| |||| |||| | ||||||||||
Sbjct: 1 atactccatccattttaaaatgtttaacaccattgatttttaagtacgtatttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtacata--tagttttacatattttacaaatatttttgaataagac 196
||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||
Sbjct: 121 aaatatatttttatgtacacacatagttttacatatttcacaaattttttt-aataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| ||| |||||||||||||| ||||||| ||| ||||| ||||||||| ||||
Sbjct: 180 gaacggtcaaatatgtgctaaaaagttaacggtgataaatattttaaaacggagggagta 239
Query: 257 t 257
|
Sbjct: 240 t 240
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||||||||| ||| ||| ||| ||||||||| | || ||||||| ||
Sbjct: 240 atactccctccgttttaaaatatttatcaccgttaactttttagcacatatttgaccgtt 181
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 180 cgtcttatt 172
Score = 46.1 bits (23), Expect = 3e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| ||| ||| | || || |||| |||| ||||| |||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaatacgtacttaaaaatcaatggtgttaaacatttt 17
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 182 bits (92), Expect = 2e-45
Identities = 146/164 (89%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| |||||||||||||||| ||||||||||| |||||| |
Sbjct: 85 tttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatat 144
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 145 acacatatagttttacatatttcacaaat-tttttgaataagacgaacggtcaaacatgt 203
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 204 gctaaaaagttaacggtgtcaaatattttgaaacggagggagta 247
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||| |||||||| ||| ||||||||| | |||||||||| |||
Sbjct: 247 tactccctccgtttcaaaatatttgacaccgttaactttttagcacatgtttgaccgttc 188
Query: 80 gtcttatt 87
||||||||
Sbjct: 187 gtcttatt 180
Score = 61.9 bits (31), Expect = 4e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaac 236
|||||||||||||||||||||| ||| ||||| ||| |||||| |||||||||| ||||
Sbjct: 81 aaatatttttgaataagacgaatggtcaaacacatgcttaaaaaatcaacggtgttaaac 22
Query: 237 att 239
|||
Sbjct: 21 att 19
>RF01058;MIR806;AACV01022783.1/13844-14079 39947:Oryza sativa
Japonica Group
Length = 236
Score = 180 bits (91), Expect = 7e-45
Identities = 124/134 (92%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||
Sbjct: 101 tatcatttgattcattgttaaatatatttttatgtaggcatataattttatatattttac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 161 aaaagtttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaaca 220
Query: 238 ttttgaaacggagg 251
|||||||| |||||
Sbjct: 221 ttttgaaatggagg 234
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||||||| ||||||||||| || ||||||||||||| | |||||| ||| ||||||
Sbjct: 236 tccctccatttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttcgtc 177
Query: 83 ttatt 87
|||||
Sbjct: 176 ttatt 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||||||| ||||| || |||||||||| ||| ||||| ||||
Sbjct: 74 tttttgaataagacgaacggtcaaacaggtttaaaaaagtcaatggtatcaaatattt 17
>RF01058;MIR806;AACV01020567.1/776-1014 39947:Oryza sativa Japonica
Group
Length = 239
Score = 176 bits (89), Expect = 1e-43
Identities = 128/140 (91%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 100 tatcatatgattcattgttaaatatatttttatgtaggcatatacttttacatatttcac 159
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aaaagtttttaaataaaacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 219
Query: 238 ttttgaaacggaggaagtat 257
|||||||||||||| |||||
Sbjct: 220 ttttgaaacggagggagtat 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||||||| | |||||| ||| ||
Sbjct: 239 atactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 180
Query: 79 cgtcttatt 87
||| |||||
Sbjct: 179 cgttttatt 171
>RF01058;MIR806;AAAA02022646.1/10228-10466 39946:Oryza sativa Indica
Group
Length = 239
Score = 176 bits (89), Expect = 1e-43
Identities = 203/241 (84%), Gaps = 6/241 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccatt 78
|||||||||| ||||||||| |||||||| |||||||||||| |||| | ||||||||||
Sbjct: 2 tactccctccgttttaaaatatttgacaccgttgactttttaagtatgtatttgaccatt 61
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||| |||||||| | ||||
Sbjct: 62 cgtcttattcaaaaaatttaagtaattatttattatttttatat-atttgatttattgtt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||||||| ||||||| ||||||||||||||||| ||||| |||| ||||| ||
Sbjct: 121 aaatatattttaatgtacacatatagttttacatatttcacaaacttttt--aataaaac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||| ||||
Sbjct: 179 gaacggttaaacatgtgttaaaaagttaacggtgtcaaacattttaaaatggagggagta 238
Query: 257 t 257
|
Sbjct: 239 t 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||||||||||||||||||||||| ||| |||||||| | |||||| ||| ||
Sbjct: 239 atactccctccattttaaaatgtttgacaccgttaactttttaacacatgtttaaccgtt 180
Query: 79 cgtcttatt 87
||| |||||
Sbjct: 179 cgttttatt 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| ||| ||| | | | ||||||||||||||||||||| |||||
Sbjct: 76 tttttgaataagacgaatggtcaaatacatacttaaaaagtcaacggtgtcaaatatttt 17
Query: 242 gaaacggaggaagta 256
||||||||| ||||
Sbjct: 16 aaaacggagggagta 2
>RF01058;MIR806;AP008216.1/15870674-15870917 39947:Oryza sativa
Japonica Group
Length = 244
Score = 176 bits (89), Expect = 1e-43
Identities = 201/238 (84%), Gaps = 5/238 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttag-tatatgtttgaccat 77
|||||||||||||||||||||||||||||| ||| |||||| | || ||| |||||||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaacttttaaaatacgtgtgtgaccat 60
Query: 78 tcgtcttattnnnnnnnttta-agtaattatttannnnnnncatatcatttgattcactg 136
|||||||||| ||| |||||||||||| |||||||||||||||| ||
Sbjct: 61 tcgtcttattaaaaaaattttgagtaattatttattcttttcatatcatttgattcattg 120
Query: 137 ttaaatatattttcatg--tacatatagttttacatattttacaaatatttttgaataag 194
||||||||||||||||| |||||||||||||| |||||| ||| || ||||| |||||
Sbjct: 121 ttaaatatattttcatgcatacatatagttttatatatttcacagattttttttaataat 180
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca-ttttgaaacggagg 251
||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 181 acgaacggtcaaacatgtgttaaaaagtcaacggtgttaaacatttttgaaacggagg 238
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 217 aaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||| |||||||||||||||||| ||| ||||| |||||
Sbjct: 41 aaaagttaacggtgtcaaacattttaaaatggagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||| |||| |||||||||||| | |||||||||| ||||| |||||
Sbjct: 227 aaaatgtttaacaccgttgactttttaacacatgtttgaccgttcgtattatt 175
>RF01058;MIR806;AACV01016852.1/644-883 39947:Oryza sativa Japonica
Group
Length = 240
Score = 176 bits (89), Expect = 1e-43
Identities = 200/239 (83%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||||| ||| ||||| ||| |||| ||||||||||||||| ||||||||||| |
Sbjct: 2 tactccctcggtttcaaaatatttaacaccattgactttttagtatgtgtttgaccatac 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| |||||||||| ||||| |||||
Sbjct: 62 gtcttatttaaaaattttaagtaattatttatttttt-catatcatttaattcattgtta 120
Query: 140 aatatattttcatgtac--atatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||| ||| |||||||||||||||||| | |||| ||||||||||||||
Sbjct: 121 aatatactttcatatacgcatatagttttacatatttcataaattcttttgaataagacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||| ||| || |||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 181 aacggtcaaatatatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 239
Score = 87.7 bits (44), Expect = 8e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| |||||||| ||||||||||||| |||| ||||||| |||
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttgactttttagcatatatttgaccgttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||| ||||||||| | ||| ||||| | |||||||||||| ||||| ||| |||||
Sbjct: 76 atttttaaataagacgtatggtcaaacacatactaaaaagtcaatggtgttaaatatttt 17
Query: 242 gaaacggaggaagta 256
||||| |||| ||||
Sbjct: 16 gaaaccgagggagta 2
>RF01058;MIR806;AP008211.1/2299532-2299770 39947:Oryza sativa
Japonica Group
Length = 239
Score = 176 bits (89), Expect = 1e-43
Identities = 125/136 (91%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 98 catatcatttgattcattgttaaatatactttcatgtacacatatagttttacatatttc 157
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
|||||| |||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 158 acaaattattttgaataagacgaatgatcaaacatgtgctaaaaagtcaacggtgtcaaa 217
Query: 236 cattttgaaacggagg 251
|||||||||| |||||
Sbjct: 218 cattttgaaatggagg 233
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||||||| |||||||||||||| ||||||||||||| | |||||||| ||||||||
Sbjct: 235 tccctccatttcaaaatgtttgacaccgttgactttttagcacatgtttgatcattcgtc 176
Query: 83 ttatt 87
|||||
Sbjct: 175 ttatt 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||| ||||| ||| ||| | | || ||||||||||||||| ||| ||||||
Sbjct: 79 tttttgaataaaacgaatggtcaaatacatactgaaaagtcaacggtgtaaaatattttg 20
Query: 243 aaacg 247
|||||
Sbjct: 19 aaacg 15
>RF01058;MIR806;AP002882.2/89577-89811 39947:Oryza sativa Japonica
Group
Length = 235
Score = 176 bits (89), Expect = 1e-43
Identities = 163/191 (85%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 46 tgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatt 105
Query: 127 tgattcactgttaaatatattttcatgtacatatagttttacatattttacaaatatttt 186
| ||| | ||||||||||| ||||||||||| ||| |||||||||||| |||| ||||||
Sbjct: 106 ttattaattgttaaatatactttcatgtacacatatttttacatatttcacaattatttt 165
Query: 187 tgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaac 246
| |||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 166 t-aataagacaaacggttaaacacgtgctaaaaagtcaacagtgtcaaacattttaaaac 224
Query: 247 ggaggaagtat 257
||||| |||||
Sbjct: 225 ggagggagtat 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||||||||||||||||| ||||||||||||| | ||||| ||| ||
Sbjct: 235 atactccctccgttttaaaatgtttgacactgttgactttttagcacgtgtttaaccgtt 176
Query: 79 cgtcttatt 87
||||||||
Sbjct: 175 tgtcttatt 167
>RF01058;MIR806;AACV01016865.1/28787-29026 39947:Oryza sativa
Japonica Group
Length = 240
Score = 176 bits (89), Expect = 1e-43
Identities = 202/241 (83%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgac-tttttagtatatgtttgaccatt 78
|||||||| |||||||||||||||||||| || || ||||||| | |||| |||||||
Sbjct: 2 tactccctacattttaaaatgtttgacaccattaacttttttag--tgtgttcgaccatt 59
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 60 cgtcttattaaaaaaatttaagtaattatttattattttcatatcatttgattcattgtt 119
Query: 139 aaatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagac 196
||||| | ||| |||| ||||||| |||||||||||| |||| | | ||| ||||||||
Sbjct: 120 aaataaactttgatgtacacatataattttacatatttcacaattttattttaataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 180 gaacggtcaaatatgtgctaaaaagtcaacggtatcaaacattttgaaacggagggagta 239
Query: 257 t 257
|
Sbjct: 240 t 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||| || ||||||||||||| | || ||||||| ||
Sbjct: 240 atactccctccgtttcaaaatgtttgataccgttgactttttagcacatatttgaccgtt 181
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 180 cgtcttatt 172
>RF01058;MIR806;AAAA02027845.1/1647-1874 39946:Oryza sativa Indica
Group
Length = 228
Score = 172 bits (87), Expect = 2e-42
Identities = 161/189 (85%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccatt 78
|||||||||| ||| |||||||||||||| |||||||||||| ||| ||||||| ||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttaagtacgtgtttgatcatt 61
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||| |||||||||| |||||||||||||||| ||||
Sbjct: 62 cgtcttattcaaaaaatttaaataattatttattcttttcatatcatttgattcattgtt 121
Query: 139 aaatatattttcatgtacatatagttttacatattttacaaatatttttgaataagacga 198
||||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 122 aaatatactttaatgtacatatagttttacatatttcacaaaattttttgaataagacga 181
Query: 199 acggttaaa 207
|||||||||
Sbjct: 182 acggttaaa 190
Score = 85.7 bits (43), Expect = 3e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| | | ||||| || || ||||||||||||||||||||||||||
Sbjct: 76 tttttgaataagacgaatgatcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 17
Query: 242 gaaacggaggaagta 256
|||||||||| ||||
Sbjct: 16 gaaacggagggagta 2
>RF01058;MIR806;AP008213.1/28824893-28824653 39947:Oryza sativa
Japonica Group
Length = 241
Score = 170 bits (86), Expect = 7e-42
Identities = 128/141 (90%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 101 atatcatttgattcattcttaaatatattttcatgtacacatatagttttacatatttca 160
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| | ||||| ||||||| ||| ||||||||||| |||||||||||||||||| |||||
Sbjct: 161 caatttttttttaataagatgaatggttaaacatgagctaaaaagtcaacggtgacaaac 220
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 221 attttgaaacggagggagtat 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 205 aaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
||||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 53 aaacacgtgctaaaaaatcaacggtgtctaacattttgaaacgga 9
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||| ||| ||||||||||||| |||||| ||||||
Sbjct: 241 atactccctccgtttcaaaatgtttgtcaccgttgactttttagctcatgtttaaccatt 182
Query: 79 cgtcttatt 87
| |||||||
Sbjct: 181 catcttatt 173
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 170 bits (86), Expect = 7e-42
Identities = 192/228 (84%), Gaps = 4/228 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||| ||||| || ||||||||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtttcaaaatatttgataccgttgactttttagtacatgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| ||||| |||||||||| |||||
Sbjct: 62 gtcttattaaaaaa-tttaagtaattatttattcttttcatattatttgattcattgtta 120
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||||| ||||| ||||||||||||||||| |||| | ||||| |||||||||
Sbjct: 121 aatatactttcaagtacacatatagttttacatatttcacaatttttttt-aataagacg 179
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||| ||| || ||||||||||||||| | || |||||||||||||
Sbjct: 180 aacggtcaaatatatgctaaaaagtcaactgcgttaaacattttgaaa 227
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||| ||||||||||| ||| |||||||| |||||||||||||||| ||||| |||||
Sbjct: 76 attttttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatatttt 17
Query: 242 gaaacggaggaagta 256
|||||||||| ||||
Sbjct: 16 gaaacggagggagta 2
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 24 ccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtct 83
||||| |||| ||||||||| || | ||||||||||||| |||| ||||||| |||||||
Sbjct: 234 ccctctatttcaaaatgtttaacgcagttgactttttagcatatatttgaccgttcgtct 175
Query: 84 tatt 87
||||
Sbjct: 174 tatt 171
>RF01058;MIR806;AP005804.2/167343-167104 39947:Oryza sativa Japonica
Group
Length = 240
Score = 170 bits (86), Expect = 7e-42
Identities = 199/239 (83%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| |||| ||| ||||| ||||| ||| |||||||||||||
Sbjct: 2 tactccctccgttttaaaatatttggcaccgttgatttttttatatgtgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|| ||||| |||||||||||||||| |||||||||||||||| || ||
Sbjct: 62 gttttatttaaaaaatttaagtaattatttattcttttcatatcatttgattcattgcta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||||||||||| ||||||||||||||||| ||| | ||||| ||||| |||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcacattttttttt-aataaaacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||| ||||||||||| || ||||||||| ||||||||| ||||| ||||
Sbjct: 181 aacggttaaacatatgctaaaaagttaatggtgtcaaatattttgaaatggagggagta 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| ||||| |||||||| || ||||||||| |||||||| ||| |||
Sbjct: 239 tactccctccatttcaaaatatttgacaccattaactttttagcatatgtttaaccgttc 180
Query: 80 gtcttatt 87
|| |||||
Sbjct: 179 gttttatt 172
>RF01058;MIR806;AAAA02034417.1/5267-5034 39946:Oryza sativa Indica
Group
Length = 234
Score = 168 bits (85), Expect = 3e-41
Identities = 122/132 (92%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 96 atatcatttgattcattgttaaatatacttttatgtacacatatagttttacatatttta 155
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
|||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 156 taaattttttt-aataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaac 214
Query: 237 attttgaaacgg 248
||||| ||||||
Sbjct: 215 attttaaaacgg 226
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||
Sbjct: 223 ttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 167
>RF01058;MIR806;AC137620.2/65289-65525 39947:Oryza sativa Japonica
Group
Length = 237
Score = 168 bits (85), Expect = 3e-41
Identities = 121/132 (91%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 98 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcac 157
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 158 gaaagtttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgttaaata 217
Query: 238 ttttgaaacgga 249
||||||||||||
Sbjct: 218 ttttgaaacgga 229
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||| ||| |||| ||||||||||||| | |||||| ||| |||||||||||
Sbjct: 221 aaaatatttaacaccgttgactttttagcacatgtttaaccgttcgtcttatt 169
>RF01058;MIR806;AP004119.3/51043-50804 39947:Oryza sativa Japonica
Group
Length = 240
Score = 168 bits (85), Expect = 3e-41
Identities = 195/234 (83%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||||||||| || ||||||||||||| | |||||| ||| |||
Sbjct: 2 tactccctccgtttcaaaatgtttgataccgttgactttttagcacatgtttaaccgttc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||| | | ||||||||||||| |||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattattaatttttttc-tatcatttgattcgttgtta 120
Query: 140 aatatattttcatgtacatatag--ttttacatattttacaaatatttttgaataagacg 197
|||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||||||
Sbjct: 121 aatatatttttatgtagatatataattttacatattttataaaagtttttgaataagaca 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
||||||||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 181 aacggttaaacatgtgctaaaaagtcaacggtgctaaatattttgaaacagagg 234
Score = 123 bits (62), Expect = 1e-27
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 75 ttttttaataagacgaacggttaaacatgtgctaaaaagtcaacggtatcaaacattttg 16
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AP008209.1/33469259-33469499 39947:Oryza sativa
Japonica Group
Length = 241
Score = 168 bits (85), Expect = 3e-41
Identities = 124/136 (91%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 124 atttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaat 181
|||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 106 atttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaaa 165
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 166 ttttttaaataagacgaacggttaaatatgtgctaaaaagtcaatggtgtcaaacattta 225
Query: 242 gaaacggaggaagtat 257
|||||||||| |||||
Sbjct: 226 gaaacggagggagtat 241
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||||| |||||||||||| | || ||| ||| ||
Sbjct: 241 atactccctccgtttctaaatgtttgacaccattgactttttagcacatatttaaccgtt 182
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 181 cgtcttatt 173
>RF01058;MIR806;AAAA02003260.1/25355-25115 39946:Oryza sativa Indica
Group
Length = 241
Score = 167 bits (84), Expect = 1e-40
Identities = 201/241 (83%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||| ||||| |||||| |||||||| ||||
Sbjct: 61 cgtcttattctgaacatttaagtaatcatttattctgtgtatatcagttgattcattgtt 120
Query: 139 aaatatattttcatgtacata--tagttttacatattttacaaatatttttgaataagac 196
||||||||||||||||||| | ||||||||||||||| ||||| | || |||| |||
Sbjct: 121 aaatatattttcatgtacacagttagttttacatatttcacaaaca-aattaaatatgac 179
Query: 197 gaacggttaaaca-tgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagt 255
|||||| ||||| ||||||||||||||||| |||||||||||||| |||| |||| |||
Sbjct: 180 aaacggtcaaacactgtgctaaaaagtcaaccgtgtcaaacattttaaaacagagggagt 239
Query: 256 a 256
|
Sbjct: 240 a 240
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 188 gaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 247
|||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 70 gaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacg 11
Query: 248 gaggaagtat 257
|||| |||||
Sbjct: 10 gagggagtat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttag 62
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 240 tactccctctgttttaaaatgtttgacacggttgactttttag 198
>RF01058;MIR806;AAAA02031025.1/34547-34790 39946:Oryza sativa Indica
Group
Length = 244
Score = 167 bits (84), Expect = 1e-40
Identities = 158/185 (85%), Gaps = 3/185 (1%)
Strand = Plus / Plus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 53 tgtttgaccattcgtcttattcaaaaaatttaagtcattatttattcttttcatatcatt 112
Query: 127 tgattcactgttaaatatattttcatgtaca--tatagttttacatattttacaaatatt 184
||||||| | ||||||||| ||||||| ||| ||||||||||||||||| ||||| |||
Sbjct: 113 tgattcatttttaaatatactttcatgcacacatatagttttacatatttcacaaa-att 171
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 244
||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||
Sbjct: 172 ttttaataagacgaacggtcaaatatgtgctaaaaagttaacggtgtcaaacattttgaa 231
Query: 245 acgga 249
|||||
Sbjct: 232 acgga 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||| |||||||||||||| ||| ||||||||| | || ||||||| ||
Sbjct: 244 atactccatccgtttcaaaatgtttgacaccgttaactttttagcacatatttgaccgtt 185
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 184 cgtcttatt 176
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacattttga 243
||||||||||||||||||||||||||||||
Sbjct: 37 ctaaaaagtcaacggtgtcaaacattttga 8
>RF01058;MIR806;AC105770.2/63257-63496 39947:Oryza sativa Japonica
Group
Length = 240
Score = 167 bits (84), Expect = 1e-40
Identities = 192/230 (83%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||| |||
Sbjct: 4 tactccctccgtttcaaaatgtttgacaccgttaactttttagtacgtgtttgaccgttc 63
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| || ||||||||||||| ||||||||||||||| |||||
Sbjct: 64 gtcttattaaaaaaatt-aagtaattatttattctttttatatcatttgattcattgtta 122
Query: 140 aatatattttcatgtacatatagttttacatattttacaaatatttttgaataagacgaa 199
|||||||||| || |||||||||||||||||||| |||||| ||||| |||||||| ||
Sbjct: 123 aatatatttttatacacatatagttttacatatttcacaaat-ttttttaataagacaaa 181
Query: 200 cggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
|| |||| | || ||||||||||||||||||||| |||||||||||||
Sbjct: 182 tagtcaaacgtatgttaaaaagtcaacggtgtcaaatattttgaaacgga 231
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||| ||||| || ||||||||| |||||||||||||||||||
Sbjct: 77 ttttttaataagacgaacggtcaaacacgtactaaaaagttaacggtgtcaaacattttg 18
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 17 aaacggagggagta 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||| |||||||| |||||||||||| ||| ||||||| ||| ||||||||
Sbjct: 223 aaaatatttgacaccgttgactttttaacatacgtttgactatttgtcttatt 171
>RF01058;MIR806;AAAA02011011.1/4388-4153 39946:Oryza sativa Indica
Group
Length = 236
Score = 167 bits (84), Expect = 1e-40
Identities = 194/232 (83%), Gaps = 5/232 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||| |||||||||||||| |||||| ||||||||| | ||| ||||||
Sbjct: 2 tactcactccgtttcaaaatgtttgacaccgttgacattttagtatgtatttaaccattt 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
| ||||| |||||||||||||||| ||||| |||||||||| |||||
Sbjct: 62 attttattaaaaaaatttaagtaattatttattcttttcatat-atttgattcattgtta 120
Query: 140 aatatattttcatgtacatat--agttttacatattttacaaatatttttgaataagacg 197
|||||| ||||||||||| || |||||||||||||| |||||| |||| ||||||| |
Sbjct: 121 aatatactttcatgtacacatgtagttttacatatttcacaaatttttt--aataagatg 178
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
|| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 230
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||| ||||||||||||| | |||||||||||||| |||||||
Sbjct: 222 aaaatgtttgacaccgttgactttttagcacatgtttgaccattcatcttatt 170
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggag 250
|||||| ||||||||||||||||||||||||||||||
Sbjct: 44 ctaaaatgtcaacggtgtcaaacattttgaaacggag 8
>RF01058;MIR806;AAAA02025515.1/9523-9762 39946:Oryza sativa Indica
Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 199/240 (82%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||| | ||| |||||| || |||||||||||
Sbjct: 1 atactccctccgtttctaaatgtttgacgccgttaacttttaagcgcgggtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||| |||||||| | |||||||||||||||| ||||
Sbjct: 61 cgtcttatttaaaaaatttaactaattattgatgactttcatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||| ||||||||||||||||| | |||| ||||| ||||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcataaattttttt-aataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| |||||||||||||||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 180 gaacggtcaaacatgtgctaaaaagttaatggtgtcaaacattttaaaacggagggagta 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| |||||||||||||||||| || ||||||||| | |||||||||| |||
Sbjct: 239 tactccctccgttttaaaatgtttgacaccattaactttttagcacatgtttgaccgttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| |||| | ||| |||||| ||||| ||||||||||| |
Sbjct: 75 tttttaaataagacgaatggtcaaacccgcgcttaaaagttaacggcgtcaaacatttag 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 165 bits (83), Expect = 4e-40
Identities = 122/134 (91%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
|||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 100 catatcatttgattcattgttaaatatatttttatgtagacgtatagttttacatatttt 159
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||
Sbjct: 160 acaaaagtttttgaataagacgaatggtcaaacatatgctaaaaagtcaacggtgtcaaa 219
Query: 236 cattttgaaacgga 249
|||| ||||||||
Sbjct: 220 tatttagaaacgga 233
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 224 aaatatttgacaccgttgactttttagcatatgtttgaccattcgtcttatt 173
>RF01058;MIR806;AAAA02022467.1/59045-59294 39946:Oryza sativa Indica
Group
Length = 250
Score = 165 bits (83), Expect = 4e-40
Identities = 116/126 (92%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 122 tcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttacaa 179
|||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| | |
Sbjct: 113 tcatttgattcattgttaaatatactttcatgtacacgtatagttttacatatttcaaga 172
Query: 180 atatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
|| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 173 attttttttaataagacgaacagttaaacatgtgctaaaaagtcaacggtgtcaaacatt 232
Query: 240 ttgaaa 245
||||||
Sbjct: 233 ttgaaa 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| ||||| |||||||||||||| ||||||||||||| | |||||| || ||
Sbjct: 250 atactcccttcatttcaaaatgtttgacaccgttgactttttagcacatgtttaactgtt 191
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 190 cgtcttatt 182
>RF01058;MIR806;AP008212.1/26338977-26339216 39947:Oryza sativa
Japonica Group
Length = 240
Score = 165 bits (83), Expect = 4e-40
Identities = 195/236 (82%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||| ||||| ||||| || |||||||||||||||| ||||||||||||
Sbjct: 2 tactcactccgtttcaaaatatttgataccgttgactttttagtatgtgtttgaccattt 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
||||||| |||||||||||||||| |||| |||||||||| | |||
Sbjct: 62 atcttatttaaaaaatttaagtaattatttattatttttatattatttgattcattatta 121
Query: 140 aatatattttcatgtacatat--agttttacatattttacaaatatttttgaataagacg 197
|||||| ||| |||||||||| |||||||||||||||| ||| ||||| ||||| |||
Sbjct: 122 aatatacttttatgtacatatatagttttacatattttataaaatttttttaataaaacg 181
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaa 253
|| ||||||| |||||||||||| | |||||||||||||| |||||||||||||||
Sbjct: 182 aatggttaaatatgtgctaaaaaattaacggtgtcaaacaatttgaaacggaggaa 237
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggag 250
|||||||||||||||| ||||| ||||||||||||||
Sbjct: 44 ctaaaaagtcaacggtatcaaatattttgaaacggag 8
>RF01058;MIR806;AP005885.3/85239-85476 39947:Oryza sativa Japonica
Group
Length = 238
Score = 165 bits (83), Expect = 4e-40
Identities = 199/239 (83%), Gaps = 5/239 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| |||||||||||||| ||| | ||||||||| || ||||||||||
Sbjct: 2 tactccctccatttcaaaatgtttgacacagttaaatttttagtacgtgcttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| ||||| |||||||| | |||||||||||||||| |||||
Sbjct: 62 gtcttattcaaaaaatttaaataattattcattcttttcatatcatttgattcattgtta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||||||||||| |||||||||| |||||| ||| ||||| ||||||||
Sbjct: 122 aatatactttcatgtacacatatagtttta--tatttttcaagagttttt-aataagaca 178
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||| |||||| ||||||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 179 aacggtcaaacatatgctaaaaagttaacggtgtcaaatattttaaaacggaggaagta 237
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||| ||||| ||||||||| |||||||| ||| ||||||||| |||||||||||| ||
Sbjct: 237 tacttcctccgttttaaaatatttgacaccgttaactttttagcatatgtttgaccgttt 178
Query: 80 gtcttatt 87
||||||||
Sbjct: 177 gtcttatt 170
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| || || || ||||||| | ||| |||||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaagcacgtactaaaaatttaactgtgtcaaacattttg 16
Query: 243 aaacggaggaagta 256
||| ||||| ||||
Sbjct: 15 aaatggagggagta 2
>RF01058;MIR806;AAAA02009085.1/8181-8421 39946:Oryza sativa Indica
Group
Length = 241
Score = 163 bits (82), Expect = 2e-39
Identities = 189/226 (83%), Gaps = 5/226 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccat 77
||||||||||| ||| |||| |||| ||| |||||||||||| ||| | |||||||||
Sbjct: 1 atactccctccgtttcaaaacatttggcaccgttgactttttaagtacgtatttgaccat 60
Query: 78 tcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgt 137
|||||||||| |||||||||||||||| |||||||||| ||||| |||
Sbjct: 61 tcgtcttatttaaaaaatttaagtaattatttattcttttcatatcatttaattcattgt 120
Query: 138 taaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataaga 195
|||||||| ||||||||||| ||||||||||||||||| |||| | |||| |||||||
Sbjct: 121 taaatatactttcatgtacacatatagttttacatatttcacaattttttt--aataaga 178
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
| || ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 179 caaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 224
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 34 taaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||
Sbjct: 225 taaaatgtttgacaccgttgactttttagcacatgtttgaccatttgtcttatt 172
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||| ||||||||||| ||| ||| | || || ||||||||||||||| |||| ||||
Sbjct: 76 tttttaaataagacgaatggtcaaatacgtacttaaaaagtcaacggtgccaaatgtttt 17
Query: 242 gaaacggaggaagtat 257
|||||||||| |||||
Sbjct: 16 gaaacggagggagtat 1
>RF01058;MIR806;AACV01024800.1/18542-18302 39947:Oryza sativa
Japonica Group
Length = 241
Score = 163 bits (82), Expect = 2e-39
Identities = 124/137 (90%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
|||||||||||||||| |||||||||||| || ||||| |||||| ||||| ||||||
Sbjct: 101 catatcatttgattcattgttaaatatatctttatgtaggcatataattttatatatttc 160
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 161 acaaaagtttttgaataagacgaacggtcaaacatctgctaaaaagtcaacggtgtcaaa 220
Query: 236 cattttgaaacggagga 252
||||| |||||||||||
Sbjct: 221 catttcgaaacggagga 237
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
||||| ||||| ||||||||||||||||||||||| ||||||| || ||||||||||
Sbjct: 77 tttttaaataaaacgaacggttaaacatgtgctaagaagtcaatggcgtcaaacatt 21
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||||||| ||||||||||||| | |||||||||| |||||||||||
Sbjct: 225 aaatgtttgacaccgttgactttttagcagatgtttgaccgttcgtcttatt 174
>RF01058;MIR806;AAAA02031935.1/254-13 39946:Oryza sativa Indica
Group
Length = 242
Score = 163 bits (82), Expect = 2e-39
Identities = 203/243 (83%), Gaps = 5/243 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||||| ||||| |||||||| |||||||| |||||| ||| |||||||||
Sbjct: 1 atactccctccatttcaaaatctttgacaccgttgacttcttagtacatgcttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnn-cat-atcatttgattcactg 136
|| |||||| |||||| ||||||||| ||| ||||| ||||| | ||
Sbjct: 61 cggcttattcaagaaatttaagcaattatttatttttgttcatcatcatctgatttattg 120
Query: 137 ttaaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataag 194
||||||||| ||||||||||| ||||||||||||||||| |||| | || |||||||||
Sbjct: 121 ttaaatatactttcatgtacacatatagttttacatatttcacaatttttgttgaataag 180
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaag 254
| ||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 181 atgaacggtcacacatgtgataaaa-gtcaacggtgtcaaacattttgaaacggagggag 239
Query: 255 tat 257
|||
Sbjct: 240 tat 242
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 186 ttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
||||||||| |||| ||| || ||||| |||| ||||||||||||||||| |||||||||
Sbjct: 72 ttgaataagccgaatggtcaagcatgtactaagaagtcaacggtgtcaaagattttgaaa 13
Query: 246 cggaggaagtat 257
||||| |||||
Sbjct: 12 tggagggagtat 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttt 59
||||||||||| ||| |||||||||||||| ||||||||||
Sbjct: 242 atactccctccgtttcaaaatgtttgacaccgttgactttt 202
>RF01058;MIR806;AP008209.1/3514325-3514566 39947:Oryza sativa
Japonica Group
Length = 242
Score = 163 bits (82), Expect = 2e-39
Identities = 197/238 (82%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||||||| | ||||| || |||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttaacaatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||| || || ||||||||||||||| |||||||||||||||| ||||
Sbjct: 61 cgttttttttaaaaaaattaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattt--tacaaatatttttgaataag 194
||||||| ||||||||||| ||||||||||||||||| || ||| | ||||||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcataaaaaaaaatttgaataag 180
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagga 252
||||| ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 181 acgaatggtcaaacatgttctaaaaaatcaacagtgtcaaatattttgaaacggagga 238
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 202 gttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 56 gttaaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 25 cctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctt 84
||||| ||| ||||| |||||||| ||||| ||||||| | |||||||||||||||||||
Sbjct: 237 cctccgtttcaaaatatttgacactgttgattttttagaacatgtttgaccattcgtctt 178
Query: 85 att 87
|||
Sbjct: 177 att 175
>RF01058;MIR806;AACV01005013.1/22402-22165 39947:Oryza sativa
Japonica Group
Length = 238
Score = 163 bits (82), Expect = 2e-39
Identities = 122/133 (91%), Gaps = 3/133 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||| ||| ||||| ||||||||||||||||||| ||
Sbjct: 100 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacatatttcac 159
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 160 aatt-tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaata 218
Query: 238 ttttgaaacggag 250
||| |||||||||
Sbjct: 219 tttagaaacggag 231
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| ||||||||||||| | |||||| ||| |||||||||||
Sbjct: 221 aaatatttgacaccgttgactttttagcacatgtttaaccgttcgtcttatt 170
>RF01058;MIR806;AAAA02015811.1/4865-5102 39946:Oryza sativa Indica
Group
Length = 238
Score = 161 bits (81), Expect = 6e-39
Identities = 117/128 (91%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| |||||| || ||||||||||||||||||| ||
Sbjct: 99 tatcatttgattcattgttaaatatactttcatatagacatatagttttacatatttcac 158
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 159 aattttttttgaataacacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 218
Query: 238 ttttgaaa 245
||| ||||
Sbjct: 219 tttagaaa 226
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||| |||||| ||||||||||||| ||||||||||||| | |||||||||| |||
Sbjct: 237 tactcccgccatttctaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 178
Query: 80 gtcttatt 87
|| |||||
Sbjct: 177 gtgttatt 170
>RF01058;MIR806;AAAA02002805.1/52701-52461 39946:Oryza sativa Indica
Group
Length = 241
Score = 159 bits (80), Expect = 3e-38
Identities = 143/164 (87%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttca--tg 153
||||||||||||||| |||||||||| ||||| ||||||||||| ||||| |
Sbjct: 79 ttaagtaattatttatttttttcatatcatttaattcattgttaaatatactttcacata 138
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 139 tacatatagatttatatattttacaaattttttt-aataagacgaacggtcaaacatgtg 197
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||||||||| |||||||||||||||||| |||||||| ||||||
Sbjct: 198 ctaaaaagttaacggtgtcaaacattttaaaacggagaaagtat 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 26 ctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||| |||||||||||||||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 234 ctccgttttaaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtctta 175
Query: 86 tt 87
||
Sbjct: 174 tt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||| ||||||||||| ||| ||||| ||| | ||||||| ||| |||||||||||||
Sbjct: 75 ttttttaataagacgaatggtcaaacacgtgtttaaaaagttaact-tgtcaaacatttt 17
Query: 242 gaaacggaggaagta 256
||||||||||||||
Sbjct: 16 aaaacggaggaagta 2
>RF01058;MIR806;AAAA02029878.1/5753-5991 39946:Oryza sativa Indica
Group
Length = 239
Score = 159 bits (80), Expect = 3e-38
Identities = 198/240 (82%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||| | | |||||||||||| | |||||||||| |||
Sbjct: 2 tactccctccttttgaaaatgtttgtcgctgttgactttttaccacatgtttgaccgttc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| | ||||||||||| | | |||||||||||||| |||||
Sbjct: 62 gtcttattaaaaaaat--aagtaattattaattattttcctatcatttgattcattgtta 119
Query: 140 aatatattttcatgta--catatagttttacatattttacaaatatttttgaataagacg 197
||||||||||||||| |||||| |||||||||||||| ||| ||||| ||||| ||
Sbjct: 120 aatatattttcatgttagcatataattttacatattttataaaagtttttaaataaaaca 179
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||| |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 180 aacagttaaacatgtgctaaaaagtcaacggtgtcaaatatttcgaatcggaggaagtat 239
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||| ||||||||| |||||||||||| | | ||||||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacatgtggtaaaaagtcaacagcgacaaacattttc 16
Query: 243 aaacggaggaagta 256
||| ||||| ||||
Sbjct: 15 aaaaggagggagta 2
>RF01058;MIR806;AP003683.3/85964-85726 39947:Oryza sativa Japonica
Group
Length = 239
Score = 159 bits (80), Expect = 3e-38
Identities = 183/222 (82%)
Strand = Plus / Plus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnnt 95
|||| |||||| | ||||||||||| |||||||||||||||| ||||||| |
Sbjct: 18 aaatatttgacgccgttgacttttttaaatatgtttgaccattcatcttattaaaaaaat 77
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta 155
||||||||||||| | | |||||||||||||| ||||||||||| || || ||
Sbjct: 78 ttaagtaattattaattatattcctatcatttgattcattgttaaatatacttatatata 137
Query: 156 catatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgct 215
|||||||||||| |||||| ||||| ||||||||||||||||| | |||||||||||
Sbjct: 138 catatagttttatatatttcacaaaagtttttgaataagacgaatgtgcaaacatgtgct 197
Query: 216 aaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 198 aaaaagtcaacggtgtcaaatatttagaaacggagtaagtat 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| ||||||||||||| | ||||||| |||||||||||||
Sbjct: 222 aaatatttgacaccgttgactttttagcacatgtttgcacattcgtcttatt 171
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa Indica
Group
Length = 241
Score = 159 bits (80), Expect = 3e-38
Identities = 187/225 (83%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccat 77
||||||||||| |||||||||||||||||| ||| | |||||| ||| ||||||||||||
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttaattttttaagtacatgtttgaccat 60
Query: 78 tcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgt 137
|||| ||||| |||||||||||||||| |||||||||||||| | | |
Sbjct: 61 tcgttttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattat 120
Query: 138 taaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataaga 195
|||||||| |||||| |||| ||||||||||||||||| ||||| ||||| | |||||
Sbjct: 121 taaatatactttcatatacacatatagttttacatatttcacaaactttttttattaaga 180
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||| |||||| ||||||||| |||||||||| ||| ||||
Sbjct: 181 cgaacggtcaaacatatgctaaaaaatcaacggtgttaaatattt 225
Score = 71.9 bits (36), Expect = 5e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||||||||| ||||| ||| |||||||| || ||||| | ||||||||||||||||||
Sbjct: 76 tttttgaataaaacgaatggtcaaacatgtacttaaaaaattaacggtgtcaaacatttt 17
Query: 242 gaaacggaggaagtat 257
||||||||| |||||
Sbjct: 16 aaaacggagggagtat 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||| ||| |||| ||||| ||||||| |||||||||||| |||||||||
Sbjct: 225 aaatatttaacaccgttgattttttagcatatgtttgaccgttcgtctta 176
>RF01058;MIR806;AAAA02013533.1/10091-9859 39946:Oryza sativa Indica
Group
Length = 233
Score = 159 bits (80), Expect = 3e-38
Identities = 192/233 (82%), Gaps = 12/233 (5%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2 tactccctccattttaaaatgtttgacaccattgactttttagtacatgtttgaccattc 61
Query: 80 gtctta-ttnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||| || |||||||||||||||| |||||||||||||||| | ||
Sbjct: 62 atcttatttaaaaaaatttaagtaattatttatttttttcatatcatttgattcattatt 121
Query: 139 aaatatattttcatgtacat--atagttttacatattttacaaatatttttgaataagac 196
||||||| ||||| | |||| ||||||||||||||| ||||| |||||||
Sbjct: 122 aaatatactttcacggacatacatagttttacatatt---------ttttttaataagat 172
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
|| ||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 173 aaatggtcaaacatgtgctaaaaagtcaacggtatcaaacattttgaaacgga 225
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||| ||||||| ||| ||| |||||||| |||||||||||| |||||||||||
Sbjct: 80 aaatttttttaaataagatgaatggtcaaacatgtactaaaaagtcaatggtgtcaaaca 21
Query: 238 ttttgaaacggaggaagta 256
|||| ||| ||||| ||||
Sbjct: 20 ttttaaaatggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||| ||| ||| ||||||||||| || ||||||||||||| | ||||||||||||| |
Sbjct: 230 ctccatccgtttcaaaatgtttgataccgttgactttttagcacatgtttgaccatttat 171
Query: 82 cttatt 87
||||||
Sbjct: 170 cttatt 165
>RF01058;MIR806;AACV01005742.1/10101-9864 39947:Oryza sativa
Japonica Group
Length = 238
Score = 159 bits (80), Expect = 3e-38
Identities = 128/142 (90%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
||||| |||||||| | ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 99 catattatttgatttattgttaaatatattttcatgtacagatatagttttacatatttc 158
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
| || | |||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 159 ataattttttt--aataagacgaacggttaaacatgtgctaaaaagccaacggtgtcaaa 216
Query: 236 cattttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 217 tattttgaaacggagggagtat 238
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| |||| |||||||| | |||||| ||| ||
Sbjct: 238 atactccctccgtttcaaaatatttgacaccgttggctttttagcacatgtttaaccgtt 179
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 178 cgtcttatt 170
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| || ||||| || || |||||| |||||| ||||||||||||
Sbjct: 75 ttttttaataagatgaatagtcaaacacgtactgaaaagttaacggtatcaaacattttg 16
Query: 243 aaacggagg 251
|||||||||
Sbjct: 15 aaacggagg 7
>RF01058;MIR806;AAAA02019059.1/8776-9013 39946:Oryza sativa Indica
Group
Length = 238
Score = 159 bits (80), Expect = 3e-38
Identities = 122/134 (91%), Gaps = 4/134 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
||||||| ||||| ||||||||||| ||||||||| ||||||||||| ||||||| ||
Sbjct: 101 tatcattcgattcgttgttaaatatactttcatgtatacatatagttttccatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 161 aaatatttt--aataagacgaacggttaaacatgtgctaaaaaatcaacggtgtcaaaca 218
Query: 238 ttttgaaacggagg 251
||| ||||||||||
Sbjct: 219 tttagaaacggagg 232
Score = 58.0 bits (29), Expect = 7e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||| ||| ||||||||||||| ||||| ||||||| | |||||| ||| ||||||
Sbjct: 234 tccctccgtttctaaatgtttgacaccgttgattttttagcacatgtttaaccgttcgtc 175
Query: 83 ttatt 87
|||||
Sbjct: 174 ttatt 170
>RF01058;MIR806;AAAA02004897.1/337-95 39946:Oryza sativa Indica
Group
Length = 243
Score = 159 bits (80), Expect = 3e-38
Identities = 186/222 (83%), Gaps = 8/222 (3%)
Strand = Plus / Plus
Query: 27 tccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccattcgtctta 85
||||||| |||||||||||||| ||||| |||||| ||| || |||||||||||||||||
Sbjct: 15 tccatttcaaaatgtttgacaccgttgattttttaagtacatatttgaccattcgtctta 74
Query: 86 ttnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatata 145
|| |||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 75 ttcaaaaaatttaagtaattatttattctttttatatcatttgatttattgttaaatata 134
Query: 146 ttttcatgta--catatagttttacatattttacaaatatttttgaataagacgaacggt 203
||| ||||| ||||||||||||||||||| |||||| ||||| ||||||||||||| |
Sbjct: 135 ctttgatgtatacatatagttttacatatttcacaaattttttt-aataagacgaacgat 193
Query: 204 taaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||| |||||||||||||||||||||||||||||||
Sbjct: 194 ----catgtgttaaaaagtcaacggtgtcaaacattttgaaa 231
Score = 71.9 bits (36), Expect = 5e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| ||| ||| |||| || ||||| ||||||||||||||||||||
Sbjct: 82 tttttgaataagacgaatggtcaaatatgtacttaaaaaatcaacggtgtcaaacatttt 23
Query: 242 gaaa 245
||||
Sbjct: 22 gaaa 19
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta 61
|||||||||| |||| |||||||||||||| ||||||||||||
Sbjct: 243 atactccctctatttcaaaatgtttgacaccgttgacttttta 201
>RF01058;MIR806;AAAA02011062.1/810-1047 39946:Oryza sativa Indica
Group
Length = 238
Score = 159 bits (80), Expect = 3e-38
Identities = 187/225 (83%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
||||| ||||||| |||||||||||| || |||||||||||||||||||||
Sbjct: 15 aaaatatttgacatcgttgactttttaatacgtgtttgaccattcgtcttattaaaaaaa 74
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 75 tt-aagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatgt 133
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| |||||||||||| |||| ||||| ||||||||||| ||||||||| ||| || |
Sbjct: 134 acacatatagttttacacatttcacaaacttttttgaataatacgaacggtcaaatattt 193
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||||||| |||| |||||||||||||||||||| ||||
Sbjct: 194 actaaaaagtcaatagtgtgaaacattttgaaacggaggacgtat 238
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| || ||||||||||||| ||||||| ||||||
Sbjct: 73 ttttttaataagacgaatggtcaaacacgtattaaaaagtcaacgatgtcaaatattttg 14
Query: 243 aaacgg 248
||||||
Sbjct: 13 aaacgg 8
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 25 cctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctt 84
||||| ||| ||||||||| |||| |||||||||||||| || ||||||| ||||| ||
Sbjct: 232 cctccgtttcaaaatgtttcacactattgactttttagtaaatatttgaccgttcgtatt 173
Query: 85 att 87
|||
Sbjct: 172 att 170
>RF01058;MIR806;AAAA02023902.1/640-883 39946:Oryza sativa Indica
Group
Length = 244
Score = 159 bits (80), Expect = 3e-38
Identities = 202/243 (83%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 20 tactccctccatttt-aaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| |||| ||||||||||| | ||||| |||| || | ||||||||||||
Sbjct: 2 tactccctccgttttcaaaatgtttgaaatcgttgatttttgagcacgtgtttgaccatt 61
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
|||||||| |||||||||||||||| | |||||||||||||| ||||
Sbjct: 62 tgtcttattaaaaaaatttaagtaattatttattcttttcgtatcatttgattcattgtt 121
Query: 139 aaat---atattttcatgtaca--tatagttttacatattttacaaatatttttgaataa 193
|||| ||| ||||||||||| |||||||| |||||||| |||||| ||||| |||||
Sbjct: 122 aaattatatactttcatgtacacatatagtttgacatatttcacaaattttttt-aataa 180
Query: 194 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaa 253
||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacgaacaatcaaacatatgctaaaaagtcaacggtgtcaaacattttgaaacggaggaa 240
Query: 254 gta 256
|||
Sbjct: 241 gta 243
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||| ||||| ||| |||||||||||||| ||||||||||||| |||||||||| |||
Sbjct: 243 tacttcctccgtttcaaaatgtttgacaccgttgactttttagcatatgtttgattgttc 184
Query: 80 gtcttatt 87
||||||||
Sbjct: 183 gtcttatt 176
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| || ||| ||||| ||||| |||| |||||| | ||||||||||||
Sbjct: 76 ttttttaataagacaaatggtcaaacacgtgctcaaaaatcaacgatttcaaacattttg 17
Query: 243 aaa 245
|||
Sbjct: 16 aaa 14
>RF01058;MIR806;AAAA02026273.1/286-45 39946:Oryza sativa Indica
Group
Length = 242
Score = 157 bits (79), Expect = 1e-37
Identities = 203/243 (83%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||||||| |||| |||||||||||| | |||||||||||||
Sbjct: 2 tactccctcccttttaaaatgttttacaccgttgactttttaacacgtgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| |||||||||||||| | |||||
Sbjct: 62 gtcttattcaataaatttaagtaattatttattcttttcatatcatttgatttattgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatatt--ttacaaatatttttgaataaga 195
|||||| |||||||| ||||||||||||||||||| || || | ||||| |||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatattaatttcaca-cttttttaataaga 180
Query: 196 cgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggaag 254
||||||||||||||||| | ||||||||||| || || ||| ||||||||||||||| ||
Sbjct: 181 cgaacggttaaacatgtacttaaaaagtcaatggcgt-aaatattttgaaacggagggag 239
Query: 255 tat 257
|||
Sbjct: 240 tat 242
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 186 ttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||||||| ||| ||||| ||| ||||||||||||||||| ||||||||| |||
Sbjct: 72 ttgaataagacgaatggtcaaacacgtgttaaaaagtcaacggtgtaaaacattttaaaa 13
Query: 246 cggaggaagta 256
||||| ||||
Sbjct: 12 gggagggagta 2
>RF01058;MIR806;AAAA02007571.1/43599-43359 39946:Oryza sativa Indica
Group
Length = 241
Score = 157 bits (79), Expect = 1e-37
Identities = 188/228 (82%), Gaps = 2/228 (0%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||| || ||| ||||| ||||| || | | |||||||| || ||||| |||||||
Sbjct: 2 tactcccaccgtttcaaaatatttgataccgataactttttaatacgtgtttaaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
||||||| |||||||||||||||| |||||||||||||| | |||||
Sbjct: 62 atcttatttaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| | ||||||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 122 aatatactctcatgtacacatatagttttacatatttcacaaattgttttgaataagacg 181
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||| | |||||| || |||||||||||||||||||||||||||||||
Sbjct: 182 aacgatcaaacatatgttaaaaagtcaacggtgtcaaacattttgaaa 229
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||| ||||| |||||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 237 tcccttcatttcaaaatgtttgacaccgttgactttttaacatatgtttgatcgttcgtc 178
Query: 83 ttatt 87
|||||
Sbjct: 177 ttatt 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| ||||||||| || |||||||| | |||| ||||| ||||||
Sbjct: 75 tttttaaataagatgaatggttaaacacgtattaaaaagttatcggtatcaaatattttg 16
Query: 243 aaacgg 248
||||||
Sbjct: 15 aaacgg 10
>RF01058;MIR806;AAAA02026041.1/22149-21912 39946:Oryza sativa Indica
Group
Length = 238
Score = 157 bits (79), Expect = 1e-37
Identities = 119/130 (91%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 100 tatcatttgattcattgttaaatatattttcatgtatacatatagttttacatatttcac 159
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||||||| ||| |||| ||||||||||||||||||| |||||| |
Sbjct: 160 aaa-atttttgaataagacgaatggtcaaacttgtgctaaaaagtcaacggggtcaaata 218
Query: 238 ttttgaaacg 247
||| ||||||
Sbjct: 219 tttagaaacg 228
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||| | ||||||||||||| | | ||||||||||||||||||||
Sbjct: 221 aaatatttgaccccgttgactttttagcacaagtttgaccattcgtcttatt 170
>RF01058;MIR806;AP008208.1/31673629-31673391 39947:Oryza sativa
Japonica Group
Length = 239
Score = 157 bits (79), Expect = 1e-37
Identities = 186/224 (83%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| |||| ||||||| |||| ||| ||||||||| |||||||||||||||
Sbjct: 1 atactccatccgttttggaatgtttaacaccgttaactttttagcatatgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||| ||||| |||||||||||||| | | |||||||||||| | ||||
Sbjct: 61 cgttttatttaaaaaatttaagtaattattaattcttttcctatcatttgatttattgtt 120
Query: 139 aaatatattttcatgta--catatagttttacatattttacaaatatttttgaataagac 196
||||||||||| ||||| |||||| ||||| |||||| ||||| |||||| ||||||||
Sbjct: 121 aaatatatttttatgtaagcatataattttatatatttcacaaaaattttt-aataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||| | |||||| |||||||||||||||||||
Sbjct: 180 gaacggttaaacatgggttaaaaaatcaacggtgtcaaacattt 223
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
||||| ||||| ||||| ||| |||||| ||||||||||| |||||||| |||||||
Sbjct: 75 tttttaaataaaacgaatggtcaaacatatgctaaaaagttaacggtgttaaacatt 19
>RF01058;MIR806;AACV01018965.1/447-687 39947:Oryza sativa Japonica
Group
Length = 241
Score = 157 bits (79), Expect = 1e-37
Identities = 128/142 (90%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
|||||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||
Sbjct: 99 catatcatttgattcattgttaaatatactttcatgtacacatataattttacatatttc 158
Query: 176 acaaatatttttgaa-taagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaa 234
| || | ||||| || ||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 159 ataattttttttaaaataagacgaatagtcaaacatgtgctaaaaagtcaacggtgtcaa 218
Query: 235 acattttgaaacggaggaagta 256
||||||||||||||||||||||
Sbjct: 219 acattttgaaacggaggaagta 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||| ||||| ||| |||||||||||||| ||||||||||||| | ||||||||| ||||
Sbjct: 240 tacttcctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgactattc 181
Query: 80 gtcttatt 87
||||||||
Sbjct: 180 gtcttatt 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||
Sbjct: 74 ttttttaataagacgat-ggttaaacatgtgctaaaaagcatacggtgcataacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 157 bits (79), Expect = 1e-37
Identities = 176/212 (83%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| |||||||||||| || |||||||| ||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttaatacatgtttgatcatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||| | | ||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttattatt 120
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||| ||| |||||||||| |||||| ||||| ||||||||||||||
Sbjct: 121 aaatatactttcatgcacacatatagttttatatatttcacaaaattttttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacgg 228
|||||| ||||||||| |||||||| |||||
Sbjct: 181 aaacggtcaaacatgtgttaaaaagttaacgg 212
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| | | |||||||| ||||||||||||||||||||| ||||||
Sbjct: 75 tttttgaataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
>RF01058;MIR806;AP008215.1/9244991-9244779 39947:Oryza sativa
Japonica Group
Length = 213
Score = 157 bits (79), Expect = 1e-37
Identities = 128/142 (90%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
|||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 73 catatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttc 132
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 133 acaaaagtttttgaataagacgaacg-tcaaacatgtgctaaaaagtcaatggtgtcaaa 191
Query: 236 cattttgaaacggaggaagtat 257
|||| |||||||||| |||||
Sbjct: 192 tatttcgaaacggagggagtat 213
Score = 50.1 bits (25), Expect = 2e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| |||||||| |||||||||||| | |||||||| | ||
Sbjct: 213 atactccctccgtttcgaaatatttgacaccattgactttttagcacatgtttga-cgtt 155
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 154 cgtcttatt 146
>RF01058;MIR806;AAAA02000035.1/1574-1333 39946:Oryza sativa Indica
Group
Length = 242
Score = 157 bits (79), Expect = 1e-37
Identities = 179/216 (82%), Gaps = 2/216 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||||||||| ||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttatagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 61 cgtcttattcagaaaatttaagtaattatttattcttttcatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||| || |||||||||||||| ||||| || | | | | | |||||||
Sbjct: 121 aaatatactttcacgtacacatatagttttacctatttcacgattttctctcgataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtc 232
||||||| |||||||||||||| |||||||||||||
Sbjct: 181 gaacggtcaaacatgtgctaaatagtcaacggtgtc 216
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 187 tgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaac 246
||||||||||||| ||| ||||| || ||| |||||||||||||||||| ||||||||||
Sbjct: 71 tgaataagacgaatggtcaaacacgtactataaagtcaacggtgtcaaatattttgaaac 12
Query: 247 ggaggaagtat 257
||||| |||||
Sbjct: 11 ggagggagtat 1
>RF01058;MIR806;AAAA02032505.1/42806-43047 39946:Oryza sativa Indica
Group
Length = 242
Score = 155 bits (78), Expect = 4e-37
Identities = 179/214 (83%), Gaps = 5/214 (2%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgacttttta-gtatatgtttgaccattcgtcttattnnnnnn 93
|||||||||||||| |||||||||||| ||| ||||||| |||||||||||||
Sbjct: 18 aaaatgtttgacaccgttgactttttaagtacgtgtttgaacattcgtcttattcaaaaa 77
Query: 94 ntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatg 153
|||||||||||||||| ||| |||||||||| ||||||||||| |||||||
Sbjct: 78 atttaagtaattatttattctttttatacaatttgattcattgttaaatatactttcatg 137
Query: 154 tac--atatagttttacatattttacaaatatttttgaataagacgaacggttaaacatg 211
||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||
Sbjct: 138 tacgcatatagttttacatatttcacaaacttttt--aataagacgaacggttaaacatg 195
Query: 212 tgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||||||||| | ||||| |||| ||||
Sbjct: 196 tgctaaaaagtcaacgttatcaaatatttcgaaa 229
Score = 63.9 bits (32), Expect = 1e-09
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||||||||||||||| | | ||||| || || ||||||||||||||||||||||||||
Sbjct: 77 tttttgaataagacgaatgttcaaacacgtacttaaaaagtcaacggtgtcaaacatttt 18
>RF01058;MIR806;AAAA02002874.1/2620-2380 39946:Oryza sativa Indica
Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 198/238 (83%), Gaps = 6/238 (2%)
Strand = Plus / Plus
Query: 23 tccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccattcgt 81
||||||| ||| ||||||||||||| |||||||||||| ||| ||||||||| |||||
Sbjct: 5 tccctccgtttcgaaatgtttgacaccgttgactttttaagtaagtgtttgaccgttcgt 64
Query: 82 cttattnnnnnnnt-ttaagtaattatttannnnnnncatatcatttgattcactgttaa 140
|||||| ||||||||||||||| |||||||||| ||| | |||||
Sbjct: 65 cttatttaaaaaaagttaagtaattatttatttttttcatatcatttaattaatcgttaa 124
Query: 141 atatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacga 198
||| | ||||||||||| ||||||||||||||||| |||||| |||| ||||||| ||
Sbjct: 125 ataaactttcatgtacacatatagttttacatatttcacaaatttttt--aataagaaga 182
Query: 199 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 183 acggtcaaacatgtgctaaaaagtcaacggagtcaaacattttgaaacggagggagta 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacatttt 241
||||| ||||||||||||||| ||||| | || |||||||||||||||||||||||||
Sbjct: 76 tttttaaataagacgaacggtcaaacacttacttaaaaagtcaacggtgtcaaacatttc 17
Query: 242 gaaacggagg 251
||||||||||
Sbjct: 16 gaaacggagg 7
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||| | ||||||||||||| | |||||||||| |||
Sbjct: 240 tactccctccgtttcaaaatgtttgactccgttgactttttagcacatgtttgaccgttc 181
Query: 80 gtcttatt 87
|||||||
Sbjct: 180 ttcttatt 173
>RF01058;MIR806;AAAA02025675.1/1048-809 39946:Oryza sativa Indica
Group
Length = 240
Score = 155 bits (78), Expect = 4e-37
Identities = 197/239 (82%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 2 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| | ||||||| |||||| ||||
Sbjct: 62 gtcttattcaagaaatttaagtaattatttattcttatcgtatcattagattcatggtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||||| ||||||||| | ||||||| |||||| || | ||||||||
Sbjct: 122 aatatactttcatgtacacatatagtgtaacatattccacaaat-ttgtgtcataagacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|| | | ||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 aatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 186 ttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||||||| | | ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 72 ttgaataagacgaatgttcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaa 13
Query: 246 cggaggaagta 256
|||||| ||||
Sbjct: 12 cggagggagta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 239 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaacattc 180
Query: 80 gtcttat 86
|||||||
Sbjct: 179 gtcttat 173
>RF01058;MIR806;AL731587.2/124021-123783 39947:Oryza sativa Japonica
Group
Length = 239
Score = 155 bits (78), Expect = 4e-37
Identities = 181/218 (83%), Gaps = 4/218 (1%)
Strand = Plus / Plus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnn 90
|||||||||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct: 13 ttttaaaatgtttgacactgttgactttttagaacgtgtttgaccattcgtcttattcaa 72
Query: 91 nnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttc 150
||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 73 aaaaattaagtaattatttattttttttgtatcatttgattcattgttaaatatacattt 132
Query: 151 atgtaca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaac 208
|| |||| ||||||||||||||||| |||| | |||| |||||||| ||||||||||
Sbjct: 133 atatacacatatagttttacatatttcacaattttttt--aataagacaaacggttaaat 190
Query: 209 atgtgctaaaaagtcaacggtgtcaaacattttgaaac 246
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 191 atgtgctaaaaagtcaacggtgtcaaatattttaaaac 228
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgttctaaaaagtcaacagtgtcaaacatttta 16
Query: 243 aaacggaggaagtat 257
|||| ||||||||||
Sbjct: 15 aaacagaggaagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||| |||||||| ||||||||||||| | || ||| ||| || ||||||||
Sbjct: 227 ttttaaaatatttgacaccgttgactttttagcacatatttaaccgtttgtcttatt 171
>RF01058;MIR806;AP004274.5/160198-160439 39947:Oryza sativa Japonica
Group
Length = 242
Score = 155 bits (78), Expect = 4e-37
Identities = 120/133 (90%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct: 103 tatcatttgattcattgttaaatatagtttcatgtatacatatagttttacatatttcac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||| ||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 163 aaaattttttaaataaaacgaacggtcaagcatgtgctaaaaagtcaacgatgtcaaaca 222
Query: 238 ttttgaaacggag 250
||| |||||||||
Sbjct: 223 tttagaaacggag 235
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||| ||||||||||||| | ||| |||||| ||||| |||||
Sbjct: 225 aaatgtttgacatcgttgactttttagcacatgcttgaccgttcgttttatt 174
>RF01058;MIR806;AAAA02007628.1/21696-21454 39946:Oryza sativa Indica
Group
Length = 243
Score = 155 bits (78), Expect = 4e-37
Identities = 188/226 (83%), Gaps = 5/226 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||| |||| ||||||| | ||||||||||
Sbjct: 1 atactccctccgtttcaaaatatttgacactgttaacttgttagtatgtatttgaccatt 60
Query: 79 cgtcttattnnnnnnn-tttaagtaattatttannnnnnncatatcatttgattcactgt 137
||||||||| |||||||||||||||| |||||||||||||| | |||
Sbjct: 61 cgtcttattcaaaaaaatttaagtaattatttatacttctcatatcatttgatttattgt 120
Query: 138 taaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataaga 195
|||||||| |||||| |||| ||||||||||||||||| || || ||||| |||||||
Sbjct: 121 taaatatactttcatatacacatatagttttacatattt--catattttttttaataaga 178
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||| |||||| || |||||| ||||||||||||||||||||
Sbjct: 179 cgaacggtcaaacatatgttaaaaaatcaacggtgtcaaacatttt 224
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||| ||||| |||||| |||||||||||| |||||||||||
Sbjct: 224 aaaatgtttgacaccgttgattttttaacatatgtttgaccgttcgtcttatt 172
Score = 63.9 bits (32), Expect = 1e-09
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||||||||||||||| ||| ||| | | |||| |||| ||| |||||||| |
Sbjct: 80 aaatttttttgaataagacgaatggtcaaatacatactaacaagttaacagtgtcaaata 21
Query: 238 ttttgaaacggaggaagtat 257
|||||||||||||| |||||
Sbjct: 20 ttttgaaacggagggagtat 1
>RF01062;MIR812;AACV01006600.1/44361-44190 39947:Oryza sativa
Japonica Group
Length = 172
Score = 153 bits (77), Expect = 2e-36
Identities = 145/171 (84%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
|||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttatttaaaaaatttaagtaattatttatt 113
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtacatatagttttacatat 172
||||||||||||||| ||||||||||| |||| |||||| ||||||||||||||
Sbjct: 112 ctttttatatcatttgattcattgttaaatatactttcgtgtacacatagttttacatat 53
Query: 173 tttacaaa-tatttttgaataagacgaacggttaaacatgtgctaaaaagt 222
|| ||||| | ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 52 ttcacaaactttttttaaataagacgaacggtcaaacatgtgctaaaaagt 2
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 153 bits (77), Expect = 2e-36
Identities = 192/233 (82%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||| | ||
Sbjct: 61 cgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgatttatagta 120
Query: 139 aaatatattttcatgt--acatatagttttacatatttta--caaatatttttgaataag 194
||||||| |||||| | |||||||||||||||||||| | ||| | ||||||||||
Sbjct: 121 aaatatactttcatatacacatatagttttacatatttcaacaaaaaaaatttgaataag 180
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 247
| ||||||| |||||| ||||||||||||| |||||||||||||| |||||
Sbjct: 181 atgaacggtaaaacatacactaaaaagtcaacagtgtcaaacattttaaaacg 233
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||||||| |||||||||||||| ||||||| ||| ||| |||||||
Sbjct: 231 ttttaaaatgtttgacactgttgactttttagtgtatgttttaccgttcatcttatt 175
>RF01058;MIR806;AAAA02006511.1/7100-6860 39946:Oryza sativa Indica
Group
Length = 241
Score = 153 bits (77), Expect = 2e-36
Identities = 195/236 (82%), Gaps = 6/236 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||| |||| ||| |||||||||| ||| |||| |||||||||| ||||||| ||||
Sbjct: 1 atactcgctccgtttcaaaatgtttggcaccgttggctttttagtacgtgtttgatcatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||||| |||||||||||||| | ||||
Sbjct: 61 cgtcttattcaaaaattttaagtaattatttattcttttcatatcatttgatttattgtt 120
Query: 139 aaatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagac 196
||||||| |||||||| |||||||||||||||||||| |||| ||||| ||||||||
Sbjct: 121 aaatatactttcatgtacacatatagttttacatatttcacaa--tttttttaataagac 178
Query: 197 gaacggttaaacatgtgc--taaaaagtcaacggtgtcaaacattttgaaacggag 250
|||||||||||||||| | |||||| |||| ||| | ||||||||| ||||||||
Sbjct: 179 gaacggttaaacatgtactttaaaaaatcaatggtattaaacattttaaaacggag 234
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||||||| | | ||||| || |||||||| |||||||| ||||||||||
Sbjct: 76 atttttgaataagacgaatgatcaaacacgtactaaaaagccaacggtgccaaacatttt 17
Query: 242 gaaacggag 250
|||||||||
Sbjct: 16 gaaacggag 8
>RF01058;MIR806;AAAA02033862.1/6052-6288 39946:Oryza sativa Indica
Group
Length = 237
Score = 153 bits (77), Expect = 2e-36
Identities = 188/228 (82%), Gaps = 6/228 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| || ||| |||||||||| |||||||| |||||| ||||| |||||||
Sbjct: 2 tactccctccgttacaaactgtttgacaccgttgacttcttagtacgtgttttaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|| ||||| ||||||||||||| || ||||||||||||| |||||
Sbjct: 62 gttttattaaaaaa----aagtaattatttattcttttcaaatcatttgattcattgtta 117
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||||||||||| ||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 118 aatatactttcatgtacacatatagttttacatgtttcacaaacttttttgaataagacg 177
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||| |||||||||||||||||| || ||||||||| |||||||||
Sbjct: 178 aacggtcaaacatgtgctaaaaagttaatggtgtcaaatattttgaaa 225
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||| ||||| ||| ||||| || |||| ||||||||||||||||||| ||||
Sbjct: 75 ttttttaataaaacgaatggtaaaacacgtactaagaagtcaacggtgtcaaacagtttg 16
Query: 243 aaacggaggaagta 256
|||||||| ||||
Sbjct: 15 taacggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| |||| ||||| |||||||| || ||||||||| | |||||||||| ||
Sbjct: 237 atactccctctatttcaaaatatttgacaccattaactttttagcacatgtttgaccgtt 178
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 177 cgtcttatt 169
>RF01058;MIR806;ABRL01002061.1/457-692 65489:Oryza barthii
Length = 236
Score = 153 bits (77), Expect = 2e-36
Identities = 140/163 (85%), Gaps = 4/163 (2%)
Strand = Plus / Plus
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| |||||||||||||||| ||||||||||| || ||
Sbjct: 78 tttaagtaattatttattcttttcatatcatttgattcattgttaaatatactt----gt 133
Query: 155 acatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgc 214
|| ||||||||||||||||| | |||| ||||| ||||||||||||||| |||||||| |
Sbjct: 134 acgtatagttttacatatttcataaattttttttaataagacgaacggtcaaacatgtac 193
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||| |||||||||||| ||||||||||||||| |||||
Sbjct: 194 taaaaagttaacggtgtcaaatattttgaaacggagggagtat 236
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 236 atactccctccgtttcaaaatatttgacaccgttaactttttagtacatgtttgaccgtt 177
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 176 cgtcttatt 168
Score = 58.0 bits (29), Expect = 7e-08
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc-aacggtgtcaaac 236
|||| |||||||||||||| | ||||||||| || ||||||||| ||||| ||||| |
Sbjct: 80 aaatttttttgaataagacaactggttaaacacgtcataaaaagtctaacggcgtcaa-c 22
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 21 attttgaaacggagggagtat 1
>RF01058;MIR806;AAAA02003225.1/20808-21050 39946:Oryza sativa Indica
Group
Length = 243
Score = 153 bits (77), Expect = 2e-36
Identities = 124/136 (91%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgt--acatatagttttacatatttta 176
|||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 103 atattatttgattcattgttaaatatactttcatgtgcacatatagttttacatatttca 162
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa- 235
||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 163 caaattttttt-aataagatgaacggttaaacatgtgctaaaaagttaacggtgtcaaac 221
Query: 236 cattttgaaacggagg 251
|||||| |||||||||
Sbjct: 222 cattttaaaacggagg 237
>RF01058;MIR806;AAAA02006724.1/5899-5657 39946:Oryza sativa Indica
Group
Length = 243
Score = 153 bits (77), Expect = 2e-36
Identities = 192/232 (82%), Gaps = 6/232 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||| |||| ||||||||| ||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttaacactgttgactttctagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntt---taagtaattatttannnnnnncatatcatttgattcact 135
||||||||| || ||| |||||| ||| ||||||||||||| | |
Sbjct: 61 cgtcttattcaaaaatttaattaattaattaattattttttttatatcatttgatttatt 120
Query: 136 gttaaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataa 193
||||||| || ||||||||||| |||||||||||||||||||||| | ||||| |||||
Sbjct: 121 gttaaatgtactttcatgtacacatatagttttacatattttacaatttttttt-aataa 179
Query: 194 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||| |||| |||||||||||||||||||||||||| |||| ||||
Sbjct: 180 gacgaacggtcaaacctgtgctaaaaagtcaacggtgtcaaatatttcgaaa 231
Score = 87.7 bits (44), Expect = 8e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||||||| ||| ||||| || ||| ||||||||| |||| |||||||||
Sbjct: 76 atttttgaataagacgaatggtcaaacacgtactagaaagtcaacagtgttaaacatttt 17
Query: 242 gaaacggaggaagtat 257
|||||||||| |||||
Sbjct: 16 gaaacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| ||||| |||| |||||||| ||||||||||||| | | |||||||| ||
Sbjct: 243 atactcccttcatttcgaaatatttgacaccgttgactttttagcacaggtttgaccgtt 184
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 183 cgtcttatt 175
>RF01058;MIR806;AAAA02011276.1/49843-50075 39946:Oryza sativa Indica
Group
Length = 233
Score = 153 bits (77), Expect = 2e-36
Identities = 175/210 (83%), Gaps = 3/210 (1%)
Strand = Plus / Plus
Query: 50 gttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattattt 109
||||||||||||| | |||||||||||| |||||||| ||||||||||||||
Sbjct: 25 gttgactttttagcacgtgtttgaccatttgtcttattcaaaaaaattaagtaattattt 84
Query: 110 annnnnnncatatcatttgattcactgttaaatatattttcatgtaca--tatagtttta 167
| |||||||||||||| | ||||||||||| ||||||||||| ||||| ||||
Sbjct: 85 attcttttcatatcatttgattaattgttaaatatactttcatgtacacatataggttta 144
Query: 168 catattttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacg 227
||||||| |||||| ||||| |||||||||||| || ||||| |||||||||||||||||
Sbjct: 145 catatttcacaaattttttt-aataagacgaacagtcaaacacgtgctaaaaagtcaacg 203
Query: 228 gtgtcaaacattttgaaacggaggaagtat 257
|||||||||||| ||||||||| |||||
Sbjct: 204 tagtcaaacattttaaaacggagggagtat 233
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||||||||||||||| ||||||||||||| | |||||||| ||
Sbjct: 233 atactccctccgttttaaaatgtttgactacgttgactttttagcacgtgtttgactgtt 174
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 173 cgtcttatt 165
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacgg 228
|||||||||||||| || ||| ||||| ||||||||||||||||||
Sbjct: 68 tttttgaataagacaaatggtcaaacacgtgctaaaaagtcaacgg 23
>RF01058;MIR806;ABRL01001482.1/2068-1827 65489:Oryza barthii
Length = 242
Score = 153 bits (77), Expect = 2e-36
Identities = 196/238 (82%), Gaps = 3/238 (1%)
Strand = Plus / Plus
Query: 22 ctccctccatttt-aaaatgtttgacacggttgactttttagtatatgtttgaccattcg 80
||||||||| ||| ||||||||||| | ||||| |||||||| ||||||||||||||
Sbjct: 4 ctccctccaatttcaaaatgtttgatattgttgattttttagtgcgtgtttgaccattcg 63
Query: 81 tcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaa 140
||||||| |||||||||||||||| ||||||||| ||| | ||||||
Sbjct: 64 tcttattcaaaaaatttaagtaattatttattctttttatatcatttaatttattgttaa 123
Query: 141 atatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacga 198
||||| ||||||||||| |||| |||||||||||| | ||| | ||| ||||| ||||
Sbjct: 124 atatactttcatgtacacatataattttacatatttcaaaaaaaaatttaaataaaacga 183
Query: 199 acggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||
Sbjct: 184 acggttaaacatgtgctaaaaagtcaacggtgttaaatattttaaaacggagggagta 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| ||| |||| ||||||||||||| | |||||| ||| |||
Sbjct: 241 tactccctccgttttaaaatatttaacaccgttgactttttagcacatgtttaaccgttc 182
Query: 80 gtcttatt 87
|| |||||
Sbjct: 181 gttttatt 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| | ||||||| ||||| | ||||||||||||
Sbjct: 76 tttttgaataagacgaatggtcaaacacgcactaaaaaatcaacaatatcaaacattttg 17
Query: 243 aaa 245
|||
Sbjct: 16 aaa 14
>RF01058;MIR806;AC145327.2/52567-52806 39947:Oryza sativa Japonica
Group
Length = 240
Score = 153 bits (77), Expect = 2e-36
Identities = 190/230 (82%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| ||| |||| ||||| |||||||| ||||||||||||| | ||||| ||||||
Sbjct: 2 tactctctctatttcaaaatatttgacaccgttgactttttaggacgtgtttaaccatta 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| |||||||||||||||| |||||
Sbjct: 62 gtcttatttaaaaaatttaagtaattatttattcttttcatatcatttgattcattgtta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||| | ||||| ||||||||||||||||| ||||| ||||| |||| |||
Sbjct: 122 aatatacttttacgtacacatatagttttacatatttcacaaactttttt-aatagaacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 247
||| || |||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 181 aacagtcaaacatatgctaaaaagtcaacggtgtcaaacattttaaaacg 230
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| || ||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 75 tttttaaataagactaatggttaaacacgtcctaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaa 245
|||
Sbjct: 15 aaa 13
Score = 71.9 bits (36), Expect = 5e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgac 74
|||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 228 ttttaaaatgtttgacaccgttgactttttagcatatgtttgac 185
>RF01058;MIR806;AP008214.1/26299851-26300093 39947:Oryza sativa
Japonica Group
Length = 243
Score = 153 bits (77), Expect = 2e-36
Identities = 168/202 (83%), Gaps = 2/202 (0%)
Strand = Plus / Plus
Query: 51 ttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattattta 110
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 35 ttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattta 94
Query: 111 nnnnnnncatatcatttgattcactgttaaatatattttcatgta--catatagttttac 168
|||||||||||||||| ||||||||||| || ||||| ||||||| |||||
Sbjct: 95 ttcttttcatatcatttgattcattgttaaatatacttctatgtatacatatagctttac 154
Query: 169 atattttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacgg 228
|||||| | ||| ||||| |||||||| || ||| |||||| || ||||||||||||||
Sbjct: 155 atatttcataaaattttttaaataagacaaatggtcaaacatatgttaaaaagtcaacgg 214
Query: 229 tgtcaaacattttgaaacggag 250
||||||||||||| ||||||||
Sbjct: 215 tgtcaaacattttaaaacggag 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 26 ctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||
Sbjct: 236 ctccgttttaaaatgtttgacaccgttgactttttaacatatgtttgaccatttgtctta 177
Query: 86 tt 87
||
Sbjct: 176 tt 175
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaa 225
||||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 77 tttttgaataagacgaatggtcaaacacgtactaaaaagtcaa 35
>RF01058;MIR806;AAAA02000149.1/12442-12684 39946:Oryza sativa Indica
Group
Length = 243
Score = 153 bits (77), Expect = 2e-36
Identities = 122/136 (89%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 124 atttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaat 181
|||||||||| ||||||||||| || ||||| |||| |||||||||||||| |||||
Sbjct: 108 atttgattcattgttaaatatacttatatgtatacatacagttttacatatttcacaaaa 167
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 168 atttttgaataagacgaacggtcaaacatgtgctaaaaaatcaacggtgtcaaatattta 227
Query: 242 gaaacggaggaagtat 257
|||| |||||||||||
Sbjct: 228 gaaagggaggaagtat 243
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| ||| |||| |||||||| ||||| ||||||| | |||||||||| ||
Sbjct: 243 atacttcctccctttctaaatatttgacaccgttgattttttagcacatgtttgaccgtt 184
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 183 cgtcttatt 175
>RF01058;MIR806;AP008212.1/26178843-26179082 39947:Oryza sativa
Japonica Group
Length = 240
Score = 153 bits (77), Expect = 2e-36
Identities = 125/140 (89%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacat--atagttttacatattttac 177
|||||||||||||| ||||||||||| ||||||||| || |||| ||||||||||| ||
Sbjct: 101 tatcatttgattcattgttaaatatactttcatgtatatttatagctttacatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 161 aaaattttttgaatgagacgaacggtcaaatatgtgctaaaaagtcaacggtgtcaaaca 220
Query: 238 ttttgaaacggaggaagtat 257
||| ||||| |||| |||||
Sbjct: 221 tttagaaacagagggagtat 240
Score = 58.0 bits (29), Expect = 7e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| ||| ||||||||||||| ||||||||||||| | || ||||||| ||
Sbjct: 240 atactccctctgtttctaaatgtttgacaccgttgactttttagcacatatttgaccgtt 181
Query: 79 cgtct 83
|||||
Sbjct: 180 cgtct 176
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 153 bits (77), Expect = 2e-36
Identities = 125/140 (89%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||||| |||||||||||| |||||| ||
Sbjct: 101 tatcatttgattcattgttaaatatacttttatgtatacatatagttttatatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||| ||| ||| |||||||||||||||||| |||||||| ||| |
Sbjct: 161 aaaaatttttgaataagatgaatggtcaaacatgtgctaaaaagttaacggtgtaaaata 220
Query: 238 ttttgaaacggaggaagtat 257
||| ||||||||||||||||
Sbjct: 221 tttagaaacggaggaagtat 240
Score = 71.9 bits (36), Expect = 5e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||||||||||| |||||||| ||||||||||||| || || ||||
Sbjct: 76 atttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcatcgaatattta 17
Query: 242 gaaacggaggaagtat 257
|||||||||| |||||
Sbjct: 16 gaaacggagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| ||| |||| ||| |||| ||| ||||||||| | |||||||||||||
Sbjct: 240 atacttcctccgtttctaaatattttacaccgttaactttttagcacatgtttgaccatt 181
Query: 79 cgtcttatt 87
| |||||||
Sbjct: 180 catcttatt 172
>RF01062;MIR812;AACV01023217.1/3751-3923 39947:Oryza sativa Japonica
Group
Length = 173
Score = 151 bits (76), Expect = 6e-36
Identities = 146/173 (84%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
|||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 173 gactttttagtacgtgtttaaccattcgtcttattcaaaaaatttaagtaattatttatt 114
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtaca--tatagttttacat 170
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 113 tttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttacat 54
Query: 171 attttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
|||| | ||| | ||||||||||||||||||| |||||||||||||||||||
Sbjct: 53 atttcaaaaaaaaatttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 133 tttttgaataagacgaatggttaaacacgtactaaaaagtc 173
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | |||||||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttatt 35
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa Indica
Group
Length = 240
Score = 151 bits (76), Expect = 6e-36
Identities = 124/139 (89%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttac 177
|||| ||||||||| ||||||||||| ||||| ||| | |||||||||||||||||||
Sbjct: 101 tatcgtttgattcattgttaaatatactttcacgtatacttatagttttacatattttat 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 161 aaaagtttttgaataagacgaacgttcaaatatgtgctaaaaagtcaacggtgtcaaaca 220
Query: 238 ttttgaaacggaggaagta 256
|||||||| ||||| ||||
Sbjct: 221 ttttgaaatggagggagta 239
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| |||||||||||||| ||||||||||||| | || ||||| | |||
Sbjct: 239 tactccctccatttcaaaatgtttgacaccgttgactttttagcacatatttgaacgttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
>RF01058;MIR806;AAAA02021700.1/37305-37064 39946:Oryza sativa Indica
Group
Length = 242
Score = 151 bits (76), Expect = 6e-36
Identities = 198/241 (82%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| |||| |||||| | ||||||||||| |||||||||||||||
Sbjct: 2 tactccctccatttctaaatatttgacgccgttgacttttttaaatatgtttgaccattt 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||| | |||||||||||||||| |||||
Sbjct: 62 gtcttattgaaacaatttaagtaattattaatttttttcatatcatttgattcattgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 122 aatatatttttatgtagacatatagttttacatattttacaaaagtttttaaataatacg 181
Query: 198 aacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|| || |||||| | | |||||||| ||||||| |||| |||| |||||||||| ||||
Sbjct: 182 aaaagtcaaacattttcttaaaaagttaacggtgccaaatatttagaaacggagggagta 241
Query: 257 t 257
|
Sbjct: 242 t 242
>RF01058;MIR806;AP003432.2/54591-54357 39947:Oryza sativa Japonica
Group
Length = 235
Score = 151 bits (76), Expect = 6e-36
Identities = 136/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta 155
||||||||||||||| |||||||||| ||| | ||||||||||| |||||||||
Sbjct: 75 ttaagtaattatttatttttttcatatcatttaatttattgttaaatatactttcatgta 134
Query: 156 --catatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 135 tacatatagatttacatattttacaaattttttt-aataagacgaacagttaaacatgtg 193
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacgga 249
|| |||||| |||||||||||||||||| |||||||
Sbjct: 194 ctgaaaagttaacggtgtcaaacattttaaaacgga 229
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||||||| ||| |||||| || | |||||| || |||||||||||
Sbjct: 225 ttttaaaatgtttgacaccgttaacttttcagcacatgtttaactgttcgtcttatt 169
Score = 48.1 bits (24), Expect = 7e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtca 233
||||| ||||||||||| ||||||||| |||| |||||||| ||| ||||||
Sbjct: 72 ttttttaataagacgaatggttaaacacgtgcttaaaaagttaactgtgtca 21
>RF01058;MIR806;AAAA02005385.1/2925-2694 39946:Oryza sativa Indica
Group
Length = 232
Score = 151 bits (76), Expect = 6e-36
Identities = 196/241 (81%), Gaps = 11/241 (4%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||| || |||
Sbjct: 1 atactccctccattttaaaatgtttgacaccgttaactttttagtatgtgtttaactatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||| ||||||||| |||| ||||||||||| | ||
Sbjct: 61 cgtcttattcaaaaaagttaagaaattatttattcttttcataccatttgattcattatt 120
Query: 139 aaatatattttcatg--tacatatagttttacatattttacaaatatttttgaataagac 196
||||||||||||||| || |||||||||||||||||| |||||| |||||
Sbjct: 121 aaatatattttcatgtatatatatagttttacatatttcacaaattttttt--------- 171
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| |||||||| ||| ||| |||| ||||||||| ||||||||||||||| ||||
Sbjct: 172 gaacggtcaaacatgtactagaaaatcaatggtgtcaaatattttgaaacggagggagta 231
Query: 257 t 257
|
Sbjct: 232 t 232
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||
Sbjct: 75 tttttgaataagacgaatagttaaacacatactaaaaagttaacggtgtcaaacatttta 16
Query: 243 aaacggaggaagtat 257
||| ||||| |||||
Sbjct: 15 aaatggagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgacc 75
||||||||||| ||| ||||| |||||||| |||| ||| ||||| ||||||||||
Sbjct: 232 atactccctccgtttcaaaatatttgacaccattgattttctagtacatgtttgacc 176
>RF01058;MIR806;AP003907.3/4853-4617 39947:Oryza sativa Japonica
Group
Length = 237
Score = 151 bits (76), Expect = 6e-36
Identities = 127/142 (89%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| || |||||| ||||||||||||||||||| |
Sbjct: 96 tatcatttgattcattgttaaatatacttacatgtatacatatagttttacatatttcat 155
Query: 178 aaa--tatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 156 aaaagtttttttgaataagacaaacggttaagcatgtgctaaaaagtcaacggtgtcaaa 215
Query: 236 cattttgaaacggaggaagtat 257
|||| |||||||||| |||||
Sbjct: 216 tatttagaaacggagggagtat 237
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| |||||||| ||||||||||||| | ||| || ||| ||
Sbjct: 237 atactccctccgtttctaaatatttgacaccgttgactttttagcacatgcttaaccgtt 178
Query: 79 cgtcttatt 87
||||||||
Sbjct: 177 tgtcttatt 169
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacat 210
||||||||||||||||||| ||||||||
Sbjct: 69 tttttgaataagacgaacgattaaacat 42
>RF01058;MIR806;AP008215.1/601195-601435 39947:Oryza sativa Japonica
Group
Length = 241
Score = 151 bits (76), Expect = 6e-36
Identities = 121/135 (89%), Gaps = 2/135 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
|||||||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 100 catatcatttaatttattgttaaatatactttcatgtacacatatagttttacatatttc 159
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
| || | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 160 ataacttttttttaataagacgaacggtcaaacatgtgctaaaaagttaacggtgtcaaa 219
Query: 236 cattttgaaacggag 250
|||||||||| ||||
Sbjct: 220 cattttgaaatggag 234
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||| |||||||| |||||||||||||| ||| ||||||||| | |||||||||| ||
Sbjct: 241 atactcgctccatttcaaaatgtttgacaccgttaactttttagcacatgtttgaccgtt 182
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 181 cgtcttatt 173
>RF01058;MIR806;AP008207.1/4618665-4618903 39947:Oryza sativa
Japonica Group
Length = 239
Score = 151 bits (76), Expect = 6e-36
Identities = 118/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 123 catttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaa 180
||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 103 catttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaa 162
Query: 181 tatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
| ||||||||||||| || ||| ||||||||| |||||||||||| |||||||||||||
Sbjct: 163 aaattttgaataagacaaatggtcaaacatgtggtaaaaagtcaacagtgtcaaacattt 222
Query: 241 tgaaacggagg 251
||||||||||
Sbjct: 223 agaaacggagg 233
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||||||| ||| ||||||||||||| |||||||||||| | ||||||||||||| ||
Sbjct: 236 ctccctccgtttctaaatgtttgacactgttgactttttaccacatgtttgaccatttgt 177
Query: 82 cttatt 87
||||||
Sbjct: 176 cttatt 171
>RF01058;MIR806;AP003740.2/23782-24020 39947:Oryza sativa Japonica
Group
Length = 239
Score = 151 bits (76), Expect = 6e-36
Identities = 193/233 (82%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| |||||||||||| || |||||||| |||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttattacgtgtttgactatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| || ||||||||||||| |||| |||| ||| | ||||
Sbjct: 61 cgtcttattaaaaaaatt-aagtaattatttattcttttcatacaatttaatttattgtt 119
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||| |||| |||||||||||| |||||| ||||||||||||||
Sbjct: 120 aaatatactttcatgtacacatataattttacatatttcacaaat-tttttgaataagac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
||||||| ||| |||| ||||||||| |||||||| ||| ||||| |||||||
Sbjct: 179 gaacggtcaaatatgtactaaaaagttaacggtgttaaatattttaaaacgga 231
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| || ||||| || ||||||||||||||||||||||||||||
Sbjct: 75 ttttttaataagacgaatagtcaaacacgtaataaaaagtcaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||||||||| ||| |||| ||| ||||||||||| || ||||||| ||
Sbjct: 239 atactccatccgttttaaaatatttaacaccgttaactttttagtacatatttgaccgtt 180
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa Indica
Group
Length = 238
Score = 149 bits (75), Expect = 2e-35
Identities = 177/214 (82%), Gaps = 5/214 (2%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct: 17 aaaatgtttgacatcgttgactttttagtacgtgtttgaccattcgttttattcaaaaaa 76
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 77 tttaagtaattatttattccttttatatcatttgattcattgttaaatatactttcatgt 136
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| |||||||||| |||||| ||| ||||| ||||||||||| ||| ||||||||
Sbjct: 137 acacatatagttttatatatttcacat---ttttttaataagacgaatggtcaaacatgt 193
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaac 246
| |||||||| |||||||| ||||||||| ||||
Sbjct: 194 gttaaaaagtgaacggtgtgaaacattttaaaac 227
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||| ||||| ||| ||||| || |||||||||||||| ||||||||||||||
Sbjct: 75 tttttgaataaaacgaatggtcaaacacgtactaaaaagtcaacgatgtcaaacattttg 16
Query: 243 aaac 246
||||
Sbjct: 15 aaac 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 226 ttttaaaatgtttcacaccgttcactttttaacacatgtttgaccattcgtcttatt 170
>RF01058;MIR806;AL606588.4/5999-5762 4530:Oryza sativa (rice)
Length = 238
Score = 149 bits (75), Expect = 2e-35
Identities = 126/141 (89%), Gaps = 4/141 (2%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
|||| |||||||||| ||||||||||| ||||||||||| |||||||||| |||||| |
Sbjct: 100 atattatttgattcattgttaaatatactttcatgtacacatatagttttatatatttca 159
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| | |||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 160 caattttttt--aataagacgaacggtcaaacatatgctaaaaagtcaacggtgtcaaat 217
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 218 attttgaaacggagggagtat 238
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||||||||||||| |||||||||||| ||
Sbjct: 238 atactccctccgtttcaaaatatttgacaccgttgactttttagcatatgtttgaccgtt 179
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 178 cgtcttatt 170
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 227 ggtgtcaaacattttgaaacggag 250
||||||||||||||||||||||||
Sbjct: 31 ggtgtcaaacattttgaaacggag 8
>RF01058;MIR806;AC134230.2/30599-30357 39947:Oryza sativa Japonica
Group
Length = 243
Score = 149 bits (75), Expect = 2e-35
Identities = 166/197 (84%), Gaps = 9/197 (4%)
Strand = Plus / Plus
Query: 56 tttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnn 115
|||| ||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 47 ttttaagtatgtgtttaaccattcgtcttattaaaaat-tttaagtaattatttattttt 105
Query: 116 nncatatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatt 173
||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||
Sbjct: 106 ttcatatcatttgtttcattgttaaatatgttttcatgtacacatatagttttacatatt 165
Query: 174 ttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 233
| |||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 166 tcacaaattttttt-aataagacgaacg-----acatgtgctaaaaagtcaacggtatca 219
Query: 234 aacattttgaaacggag 250
|||||||||||||||||
Sbjct: 220 aacattttgaaacggag 236
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 224 aacggtgtcaaacattttgaaacggaggaagtat 257
|||||||| ||||||||||||||||||| |||||
Sbjct: 34 aacggtgttaaacattttgaaacggagggagtat 1
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttag 62
|||||| |||| ||| ||||||||||| || |||||||||||||
Sbjct: 243 atactctctccgtttcaaaatgtttgataccgttgactttttag 200
>RF01058;MIR806;AP004736.2/60899-60661 39947:Oryza sativa Japonica
Group
Length = 239
Score = 149 bits (75), Expect = 2e-35
Identities = 127/141 (90%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 101 tatcatttgattcattgttaaatatattttcatgtatacatatagttttacatatat--c 158
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaac 236
||| |||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 159 aaaaatttttaaataagacgaaaggtcaaacatgtgcttaaaaagtcaacggtgtcaaat 218
Query: 237 attttgaaacggaggaagtat 257
|||| |||||||||| |||||
Sbjct: 219 atttagaaacggagggagtat 239
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccat 77
||||||||||| ||| |||| |||||||| ||||||||||| || | |||||||||| |
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttaagcacatgtttgacctt 180
Query: 78 tcgtcttatt 87
||||||||||
Sbjct: 179 tcgtcttatt 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||| ||||||||||| | | |||||||| ||||||||||| | |||||| ||||
Sbjct: 76 attttttaataagacgaatgatcaaacatgtttaaaaaagtcaacagcgtcaaatattta 17
Query: 242 gaaacggagg 251
||||||||||
Sbjct: 16 gaaacggagg 7
>RF01058;MIR806;AAAA02022678.1/8425-8663 39946:Oryza sativa Indica
Group
Length = 239
Score = 147 bits (74), Expect = 1e-34
Identities = 134/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 76 tttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatgt 135
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| ||||||||||||||||| | |||||||||| ||||||||||||| | ||||| ||
Sbjct: 136 acacatatagttttacatatttaataaatattttt-aataagacgaacgatcaaacacgt 194
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaac 246
|||| |||||||||||||||||| ||||| ||||
Sbjct: 195 gctataaagtcaacggtgtcaaatattttaaaac 228
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||| |||||||| ||||||||| ||| | ||||||| | |||||||||||
Sbjct: 227 ttttaaaatatttgacaccgttgactttatagcacgtgtttgatcgttcgtcttatt 171
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 147 bits (74), Expect = 1e-34
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttta 176
||||||||||||||| | ||||||||| || ||||| |||||||||||||||||||||
Sbjct: 99 atatcatttgattcatttttaaatatacttatatgtatgcatatagttttacatatttta 158
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 159 taaaagtttctgaataagacgaacggtcaaacatgtgccaaaaagtcaacggtgtcaaat 218
Query: 237 attttgaaacggaggaagtat 257
|||| |||||||||| |||||
Sbjct: 219 atttagaaacggagggagtat 239
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| |||||||| ||||||||||| | | |||||||||| ||
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttggcacatgtttgaccgtt 180
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AAAA02021981.1/21983-21742 39946:Oryza sativa Indica
Group
Length = 242
Score = 147 bits (74), Expect = 1e-34
Identities = 201/243 (82%), Gaps = 5/243 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattc-actgt 137
| ||||||| |||||||||| ||||| |||||||||||| || | |
Sbjct: 61 cttcttattcaaaaaatttaagtaatgatttattcttatcatatcatttgagtccagagc 120
Query: 138 taaatatattttcatgtaca--tatagttt-tacatattttacaaatatttttgaataag 194
|||| ||| | |||| |||| ||||||| |||||||||||| ||| ||||||||||||
Sbjct: 121 taaacatactatcatatacacatatagttactacatattttactaatttttttgaataag 180
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaag 254
||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 181 acgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaaca-tttgaaacggagggag 239
Query: 255 tat 257
|||
Sbjct: 240 tat 242
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagaagaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||| |||||||||| ||||||||||||| | ||||||||||||
Sbjct: 242 atactccctccgtttcaaa-tgtttgacaccgttgactttttagcacgtgtttgaccatt 184
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 183 cgtcttatt 175
>RF01058;MIR806;AACV01006891.1/73451-73212 39947:Oryza sativa
Japonica Group
Length = 240
Score = 147 bits (74), Expect = 1e-34
Identities = 192/231 (83%), Gaps = 5/231 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||| ||||||||||| || |||||||||| |||| ||| | |||||||
Sbjct: 2 tactctctccgtttcaaaatgtttgataccgttgactttt-agtacgtgtctaaccattc 60
Query: 80 gtcttattnnnnnnntttaa-gtaattatttannnnnnncatatcatttgattcactgtt 138
|||||||| ||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 61 gtcttattcaaaaaatttaaagtaattatttattctttttatatcatttgattcattgtt 120
Query: 139 aaatatattttcatgtac--atatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||| || |||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 121 aaatatactttcatgcacccatatagttttacatattttataaactttttt-aataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 247
|||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 180 gaacggttaaacatgtgctaaaaagttaatggtgtcaagtattttgaaacg 230
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||||| ||| || |||||| ||||||||| ||||||||||||
Sbjct: 74 tttttgaataagacgaatggttagacacgtactaaaa-gtcaacggtatcaaacattttg 16
Query: 243 aaacggag 250
||||||||
Sbjct: 15 aaacggag 8
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 147 bits (74), Expect = 1e-34
Identities = 119/133 (89%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||||||||||||| |||||| |||||||||||| ||
Sbjct: 95 tatcatttgatttattgttaaatatattttcatgtatacatataattttacatatttcac 154
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||| |
Sbjct: 155 aaaattttttgaataagacgaacggtcaaacatatgttaaaaagtcaacggtgtcaaata 214
Query: 238 ttttgaaacggag 250
||| ||||||||
Sbjct: 215 tttaaaaacggag 227
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||| |||| |||| |||| |||||||| |||||||||||| |||||||||||| ||
Sbjct: 234 atactctctccgtttttaaatatttgacaccgttgactttttaacatatgtttgaccgtt 175
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 174 cgtcttatt 166
>RF01058;MIR806;AACV01027603.1/5402-5167 39947:Oryza sativa Japonica
Group
Length = 236
Score = 147 bits (74), Expect = 1e-34
Identities = 184/223 (82%), Gaps = 3/223 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
|||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 17 aaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaa 76
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
||||| || ||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 77 tttaattatttatttattctttttatatcatttgattcattgttaaatatattttcatg- 135
Query: 155 acatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgc 214
| |||||||||||||||||| || ||||| ||||||||||||| | |||| ||||
Sbjct: 136 atgtatagttttacatattttgtaa--tttttttaataagacgaacgatcaaacgtgtgt 193
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||||||| || || ||||||||||||||||| |||||
Sbjct: 194 taaaaagtcaacagtatcgtacattttgaaacggagggagtat 236
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||| |||| |||||
Sbjct: 15 taactgagggagtat 1
>RF01058;MIR806;AAAA02018250.1/70399-70160 39946:Oryza sativa Indica
Group
Length = 240
Score = 147 bits (74), Expect = 1e-34
Identities = 196/239 (82%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||| ||| ||| ||||| |||||||| ||||||||||||||| ||||| |||||||
Sbjct: 2 tactccatccgtttcaaaatatttgacaccgttgactttttagtacgtgtttaaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| || |||||| |||||| ||||||||||||||| |||||
Sbjct: 62 gtcttattaaaaaaatt-aagtaactatttattctttttatatcatttgattcattgtta 120
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacg 197
|||||| ||| ||||||| ||||||||||||||||| ||||| ||||| | |||||||
Sbjct: 121 aatatacttttatgtacacatatagttttacatatttcgcaaattttttttattaagacg 180
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||| || ||||||||||||||| ||||||| | ||| |||||||||||||||| ||||
Sbjct: 181 aacagtcaaacatgtgctaaaacgtcaacgataccaaccattttgaaacggagggagta 239
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 75 ttttttaataagacgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AACV01024135.1/14562-14797 39947:Oryza sativa
Japonica Group
Length = 236
Score = 147 bits (74), Expect = 1e-34
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtacatat--agttttacatatttt 175
|||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 95 catatcatttgattcatggttaaatatatttatatgtatatatatagttttacatatttt 154
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
| ||| ||||||||||||||||||||| |||||| |||||||||||||| |||||||||
Sbjct: 155 ataaaagtttttgaataagacgaacggtcaaacatatgctaaaaagtcaatggtgtcaaa 214
Query: 236 cattttgaaacggaggaagta 256
|||| |||||||||| ||||
Sbjct: 215 tatttagaaacggagggagta 235
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 235 tactccctccgtttctaaatatttgacaccattgactttttagcatatgtttgaccgttc 176
Query: 80 gtcttatt 87
||||||||
Sbjct: 175 gtcttatt 168
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 189 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgg 248
||||||||||||||| |||||| | |||||||||||| | |||||| |||| |||||||
Sbjct: 69 aataagacgaacggtcaaacatattttaaaaagtcaacagcgtcaaatatttagaaacgg 10
Query: 249 ag 250
||
Sbjct: 9 ag 8
>RF01058;MIR806;AP008211.1/11219819-11220068 39947:Oryza sativa
Japonica Group
Length = 250
Score = 147 bits (74), Expect = 1e-34
Identities = 184/225 (81%), Gaps = 9/225 (4%)
Strand = Plus / Plus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnnt 95
||||||||||| ||||||||||||| | || |||||| ||||||||||| |
Sbjct: 22 aaatgtttgacgtcgttgactttttagcacatatttgactgttcgtcttattcaaaaaat 81
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta 155
||||||||||||| | | |||||||||||||| |||||||||||||||||||||
Sbjct: 82 ttaagtaattattaattcttttcttatcatttgattcattgttaaatatattttcatgta 141
Query: 156 --catatagttttacatattttacaaatattttt-------gaataagacgaacggttaa 206
|||||| |||||||||||| ||||| ||||| ||||||||| |||||| ||
Sbjct: 142 ggcatataattttacatatttcacaaaagtttttaacttttgaataagacaaacggtcaa 201
Query: 207 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 202 acatgtgctaaaaagtcaacggtgtcaaatattttgaaacggagg 246
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
|||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||
Sbjct: 79 tttttgaataagacgaacagtcaaatatgtgctaaaaagtcaacgacgtcaaacattt 22
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 21 actccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcg 80
||||||||| ||| ||||| |||||||| ||||||||||||| | |||||||||| || |
Sbjct: 250 actccctccgtttcaaaatatttgacaccgttgactttttagcacatgtttgaccgtttg 191
Query: 81 tcttatt 87
|||||||
Sbjct: 190 tcttatt 184
>RF01058;MIR806;AP008214.1/6309436-6309676 39947:Oryza sativa
Japonica Group
Length = 241
Score = 147 bits (74), Expect = 1e-34
Identities = 194/235 (82%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||| ||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 1 atactccatccgtttcgaaatgtttgacactattgactttttattatatgtttaaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
| ||||||| || ||||||||||| | |||||||||||||| ||||
Sbjct: 61 catcttattaaaaaaatt-aagtaattattaattatttttctatcatttgattcattgtt 119
Query: 139 aaatatattttcatgta--catatagttttacatattttacaaatatttttgaataagac 196
||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 120 aaatatatttttatgtatacatatagttttatatatttcacaaaattttttgaataagac 179
Query: 197 gaacggttaaacatgtgct-aaaaagtcaacggtgtcaaacattttgaaacggag 250
|||| || ||||||||||| ||||| |||||||| |||||||||| |||||||||
Sbjct: 180 gaacagtcaaacatgtgctaaaaaaatcaacggtatcaaacatttcgaaacggag 234
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| |||||||||| | ||||||||||| ||||||||||||| |
Sbjct: 75 ttttttaataagatgaatggttaaacatataataaaaagtcaatagtgtcaaacatttcg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01062;MIR812;AAAA02034426.1/30822-30993 39946:Oryza sativa Indica
Group
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 144/171 (84%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
|||||||||||| ||||||||||||||||||||| ||||| || |||||||
Sbjct: 172 gactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaaatatttatttatt 113
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtaca-tatagttttacata 171
|||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 112 cttttcatatcatttgattcattgttaaatatactttcatgtacaatatagttttacata 53
Query: 172 ttttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagt 222
||| ||||| ||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 52 tttcacaaaatttttttaataagacgaacggtcaaacatgtactaaaaagt 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 actttttagtatatgtttgaccattcgtcttatt 87
||||||||||| |||||||||| |||||||||||
Sbjct: 2 actttttagtacatgtttgaccgttcgtcttatt 35
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||||||||||||||| ||| ||||| || ||||||||||
Sbjct: 132 tttttgaataagacgaatggtcaaacacgtactaaaaagtc 172
>RF01058;MIR806;AF100766.1/3868-3633 4530:Oryza sativa (rice)
Length = 236
Score = 145 bits (73), Expect = 4e-34
Identities = 179/218 (82%), Gaps = 2/218 (0%)
Strand = Plus / Plus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnnt 95
|||| |||||| | |||||||||||| |||||||||||| ||||||||||| |
Sbjct: 18 aaatatttgacgccgttgactttttaaaatatgtttgaccgttcgtcttatttaaaaatt 77
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta 155
||||||||||||| | | |||||||||||||| | ||||||||| || |||||
Sbjct: 78 ttaagtaattattaattattttcctatcatttgattcattattaaatatacttatatgta 137
Query: 156 ca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 138 tacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtg 197
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||||| ||||||||| | ||| |||| ||||||||||
Sbjct: 198 ctaaaatgtcaacggtattaaatatttagaaacggagg 235
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||| ||||||||||||||| |||||| | |||||||||||||| |||||| ||||
Sbjct: 76 atttttaaataagacgaacggtcaaacatattttaaaaagtcaacggcgtcaaatattta 17
Query: 242 gaaa 245
||||
Sbjct: 16 gaaa 13
>RF01058;MIR806;AP008246.1/111241-111003 39947:Oryza sativa Japonica
Group
Length = 239
Score = 145 bits (73), Expect = 4e-34
Identities = 159/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 64 atatgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatc 123
|||||||||||||||||||||||| ||||||||||||| | | ||||
Sbjct: 46 atatgtttgaccattcgtcttattaaaaaaaattaagtaattattaattctttccctatc 105
Query: 124 atttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaat 181
|||| ||||| | ||||||||| ||||||||| ||||||||||||||||||| ||||||
Sbjct: 106 atttaattcattattaaatatactttcatgtatacatatagttttacatatttcacaaat 165
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
||||| |||||||| || ||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 166 tttttt-aataagacaaatggtcaaacatgtgctaaaaagccaacggtgtcaaacattta 224
Query: 242 gaaacggagg 251
||||||||||
Sbjct: 225 gaaacggagg 234
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||||||| |||| |||||||| | ||||||||||||| ||||||||
Sbjct: 223 aaatgtttgacaccgttggctttttagcacatgtttgaccatttgtcttatt 172
>RF01058;MIR806;AP003243.3/61784-62019 39947:Oryza sativa Japonica
Group
Length = 236
Score = 145 bits (73), Expect = 4e-34
Identities = 121/136 (88%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 123 catttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaa 180
||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 100 catttgattcattgttaaatatactttcatgtatacatatagttttacatatttcacaaa 159
Query: 181 tatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||| | | ||||||||| |||||| ||||| |||||||||||||
Sbjct: 160 attttttgaataagacgaatgatcaaacatgtggtaaaaaatcaacagtgtcaaacattt 219
Query: 241 tgaaacggaggaagta 256
|||||||||| ||||
Sbjct: 220 agaaacggagggagta 235
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||||||||||| ||||| |||||| | |||||||| |||||
Sbjct: 235 tactccctccgtttctaaatgtttgacactgttgattttttaccacatgtttgatcattc 176
Query: 80 gtcttatt 87
||||||||
Sbjct: 175 gtcttatt 168
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| |||||| | ||||||| |||||||||||| ||| |
Sbjct: 76 ttttttaataagacgaatggtcaaacatattttaaaaagataacggtgtcaaatattaag 17
Query: 243 aaacggagg 251
|||||||||
Sbjct: 16 aaacggagg 8
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 145 bits (73), Expect = 4e-34
Identities = 158/190 (83%), Gaps = 2/190 (1%)
Strand = Plus / Plus
Query: 25 cctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctt 84
||||| ||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||
Sbjct: 1 cctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtctt 60
Query: 85 attnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaatat 144
||| |||||||| ||||| | | |||||||||||||| ||||||||||
Sbjct: 61 attcaaaaattttaagtagttattaattcttttcctatcatttgattcattgttaaatat 120
Query: 145 attttcatgta--catatagttttacatattttacaaatatttttgaataagacgaacgg 202
||||| ||||| |||||| |||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 121 atttttatgtaggcatataattttacatatttaacaaaagtttttgaatgagacgaacgg 180
Query: 203 ttaaacatgt 212
||||||||||
Sbjct: 181 ttaaacatgt 190
Score = 131 bits (66), Expect = 6e-30
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70 atttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 11
Query: 242 gaaacggagg 251
||||||||||
Sbjct: 10 gaaacggagg 1
>RF01058;MIR806;AACV01014691.1/845-606 39947:Oryza sativa Japonica
Group
Length = 240
Score = 145 bits (73), Expect = 4e-34
Identities = 177/214 (82%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
|||||||||||| | ||||||||||||||| |||||||||||| |||||||
Sbjct: 17 aaaatgtttgaccccgttgactttttagtacgggtttgaccattcatcttattcaaaaaa 76
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||||| ||||| |||||||| | ||||||||||| |||||| |
Sbjct: 77 tttaagtaattatttattcttttcatattatttgatttattgttaaatatactttcattt 136
Query: 155 aca--tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgt 212
||| ||||||||||||||||| |||||| ||||| |||||||||||||||||| ||| |
Sbjct: 137 acacatatagttttacatatttcacaaat-tttttaaataagacgaacggttaagcatat 195
Query: 213 gctaaaaagtcaacggtgtcaaacattttgaaac 246
|||||| |||||| |||||||| ||||| ||||
Sbjct: 196 actaaaatgtcaacagtgtcaaatattttaaaac 229
Score = 71.9 bits (36), Expect = 5e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| ||| ||| |||| || ||||||||||||||| |||||||||||||
Sbjct: 75 tttttgaataagatgaatggtcaaacccgtactaaaaagtcaacggggtcaaacattttg 16
Query: 243 aaac 246
||||
Sbjct: 15 aaac 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||| |||||||| |||||| |||||||||||| || ||| |||||||||||
Sbjct: 228 ttttaaaatatttgacactgttgacattttagtatatgcttaaccgttcgtcttatt 172
>RF01058;MIR806;AAAA02017197.1/13871-14114 39946:Oryza sativa Indica
Group
Length = 244
Score = 145 bits (73), Expect = 4e-34
Identities = 118/132 (89%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 105 tatcatttgattctttgttaaatatatttttatgtaggcatataattttacatatttcac 164
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| ||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |
Sbjct: 165 gaaagtttttgaataagaagaatggttaaacatgtgctaaaaagtcaacggtgttaaata 224
Query: 238 ttttgaaacgga 249
||||||||||||
Sbjct: 225 ttttgaaacgga 236
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacgg 228
||||| |||||||||||||||||||||||| |||||| || |||||
Sbjct: 78 tttttaaataagacgaacggttaaacatgtactaaaatgttaacgg 33
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
||||| ||| |||| ||||||||||||| | |||||| ||||||| |||||||
Sbjct: 228 aaaatatttaacaccgttgactttttagcacatgtttaaccattcttcttatt 176
>RF01058;MIR806;AACV01020588.1/927-1160 39947:Oryza sativa Japonica
Group
Length = 234
Score = 145 bits (73), Expect = 4e-34
Identities = 124/140 (88%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatatag--ttttacatattttac 177
|||||||||||||| ||||||||||| || ||||| ||||| |||||||||||||||
Sbjct: 95 tatcatttgattcattgttaaatatacttatatgtatatatataattttacatattttac 154
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 155 aaaaatttttgaataagataaacggtcaaacatgtgctaaaaagtcaacaatgtcaaaca 214
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 215 tttagaaacggagggagtat 234
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgacc 75
||||||||||| ||| |||||||||||| ||||||||||||| | ||||||||||
Sbjct: 234 atactccctccgtttctaaatgtttgacattgttgactttttagcacatgtttgacc 178
>RF01058;MIR806;AP005604.3/116542-116319 39947:Oryza sativa Japonica
Group
Length = 224
Score = 145 bits (73), Expect = 4e-34
Identities = 124/139 (89%), Gaps = 4/139 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttt 175
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 85 catatcatttgattcattgttaaatatactttcatgtacacatatagttttacacattt- 143
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
|| || ||||| |||||| ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 144 -catattttttttaataaggtgaacggtcaaacacgtgctaaaaagtcaacggtgtcaaa 202
Query: 236 cattttgaaacggaggaag 254
||||||||||||| |||||
Sbjct: 203 cattttgaaacgggggaag 221
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||||||||||||||| || ||||| | |||||||||||||||||||||| |
Sbjct: 80 aaatttttttgaataagacgaattgtcaaacacatactaaaaagtcaacggtgtcaaata 21
Query: 238 ttttgaaacggaggaagtat 257
||||||||| |||| |||||
Sbjct: 20 ttttgaaacagagggagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgacc 75
|||||||||||||| ||||||||||||| | |||||||||
Sbjct: 208 aaaatgtttgacaccgttgactttttagcacgtgtttgacc 168
>RF01058;MIR806;AAAA02013988.1/6415-6174 39946:Oryza sativa Indica
Group
Length = 242
Score = 145 bits (73), Expect = 4e-34
Identities = 124/140 (88%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatat--agttttacatattttac 177
|||||||||||||| |||||||||||||| ||||| |||| |||||||||||||| ||
Sbjct: 103 tatcatttgattcattgttaaatatatttatatgtatatatatagttttacatatttcac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| |||||||||||||||| |||||| |||| ||||||||||| ||||||| |
Sbjct: 163 aaaaattttcgaataagacgaacggtcaaacatatgcttaaaagtcaacgatgtcaaata 222
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 223 tttggaaacggagggagtat 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| ||||||| |||||||||| || |||||||||||| ||
Sbjct: 242 atactccctccgtttccaaatatttgacatcgttgacttttaagcatatgtttgaccgtt 183
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 182 cgtcttatt 174
>RF01058;MIR806;AACV01010775.1/2057-2297 39947:Oryza sativa Japonica
Group
Length = 241
Score = 145 bits (73), Expect = 4e-34
Identities = 125/140 (89%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 102 atatcatttgattcattgttaaatatatttttatgtacacatatagttttacatatttca 161
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||||| ||||| |||| ||||||| ||||||||| ||||||||||| |||||| |||||
Sbjct: 162 caaattttttt-aatacgacgaacagttaaacatatgctaaaaagttaacggtatcaaat 220
Query: 237 attttgaaacggaggaagta 256
||||| ||||||||| ||||
Sbjct: 221 attttaaaacggagggagta 240
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggagg 251
||||||||||||||||| |||||||||||||| ||||
Sbjct: 43 taaaaagtcaacggtgtaaaacattttgaaacagagg 7
>RF01058;MIR806;AAAA02035035.1/12905-13144 39946:Oryza sativa Indica
Group
Length = 240
Score = 143 bits (72), Expect = 2e-33
Identities = 197/240 (82%), Gaps = 5/240 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| ||||| ||||| || ||||||||||||||| | ||| |||||||
Sbjct: 2 tactccctccatttcaaaatatttgataccgttgactttttagtacgttttttaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| |||||||||||||| | |||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttattgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||||| ||||||| ||||| |||||||| || ||||| |||||||||
Sbjct: 122 aatatactttcatgtacacatataattttatatattttataa--tttttttaataagacg 179
Query: 198 aacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||| ||||| || | | |||||||| |||||||||||| ||||| ||||||||| ||||
Sbjct: 180 aacgattaaatatatacttaaaaagttaacggtgtcaaatattttaaaacggagggagta 239
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||| | || |||||||||||||||| ||||| ||||||
Sbjct: 75 ttttttaataagacgaatggtaaaaaacgtactaaaaagtcaacggtatcaaatattttg 16
Query: 243 aaacggaggaagta 256
||| ||||| ||||
Sbjct: 15 aaatggagggagta 2
Score = 58.0 bits (29), Expect = 7e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccatt 78
|||||||||| ||||||||| |||||||| ||| |||||||| |||||| ||| | | ||
Sbjct: 239 tactccctccgttttaaaatatttgacaccgttaactttttaagtatatatttaatcgtt 180
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AP008217.1/25855512-25855275 39947:Oryza sativa
Japonica Group
Length = 238
Score = 143 bits (72), Expect = 2e-33
Identities = 124/139 (89%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatatag--ttttacatattttac 177
|||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||| ||
Sbjct: 100 tatcatttgattcattgttaaatatactttcatgtatatatataattttacatatttcac 159
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |
Sbjct: 160 aaa-atttttgaataagacgaacggtcaaacatatgctaaaaagttaacggtgtcaaata 218
Query: 238 ttttgaaacggaggaagta 256
||| ||||| |||| ||||
Sbjct: 219 tttggaaacagagggagta 237
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| ||| ||||||||| |||||||||||| |||||||||||
Sbjct: 221 aaatatttgacaccgttaactttttagcatatgtttgaccgttcgtcttatt 170
>RF01058;MIR806;AP003911.3/90546-90311 39947:Oryza sativa Japonica
Group
Length = 236
Score = 143 bits (72), Expect = 2e-33
Identities = 124/139 (89%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 98 tatcatttgatttattgttaaatatatttttatgtatacatatagttttacatatttcac 157
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |
Sbjct: 158 aaaagttttt-aataagacgaatggttaaacatgtgctaaaaagtcaacggcgtcaaata 216
Query: 238 ttttgaaacggaggaagta 256
||| || ||||||| ||||
Sbjct: 217 tttagagacggagggagta 235
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||| | ||||||||||||| | |||||| |||||||||||||||
Sbjct: 219 aaatatttgacgccgttgactttttagcacatgtttaaccattcgtcttatt 168
>RF01058;MIR806;AAAA02009185.1/29593-29833 39946:Oryza sativa Indica
Group
Length = 241
Score = 143 bits (72), Expect = 2e-33
Identities = 198/241 (82%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||||||| ||||| |||||||| ||| |||||| ||||| ||||||||||||
Sbjct: 2 tactccctccatttcaaaatatttgacaccgttaacttttcagtatgtgtttgaccattt 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|| ||||| |||||||||||||||| ||||| |||||||||| ||||
Sbjct: 62 gttttattctaaaaatttaagtaattatttatttttttcatattatttgattcattgttc 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaa-atatttttgaataagac 196
||||| ||| || | |||||||||||||||||||| |||| | ||||| ||||||||
Sbjct: 122 gatatacttttatatacacatatagttttacatatttcacaattttttttttaataagac 181
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| |||| | |||||||||||||||||||||||| |||| |||||| ||| ||||
Sbjct: 182 gaacggtcaaac-tatgctaaaaagtcaacggtgtcaaatatttagaaacgaagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 58.0 bits (29), Expect = 7e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| | ||| |||| |||||||| ||||||||||||| ||| |||||||| ||
Sbjct: 241 atactcccttcgtttctaaatatttgacaccgttgactttttagcata-gtttgaccgtt 183
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 182 cgtcttatt 174
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 217 aaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||| |||||||||||| ||||||||| ||||| ||||
Sbjct: 41 aaaagttaacggtgtcaaatattttgaaatggagggagta 2
>RF01058;MIR806;AP008212.1/21880161-21879923 39947:Oryza sativa
Japonica Group
Length = 239
Score = 143 bits (72), Expect = 2e-33
Identities = 186/225 (82%), Gaps = 4/225 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||| ||| || ||||||||| | ||||||||| ||
Sbjct: 1 atactccctccgtttcaaaatgtttgccaccattaactttttagcgtgtgtttgaccgtt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| || || |||||||||| ||||||||||||| | ||||
Sbjct: 61 cgtcttattaaaaaaattaaa-taattatttattctttttatatcatttgatttattgtt 119
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||| ||||||| || |||||| |||||| ||||||||||||||
Sbjct: 120 aaatatactttcatgtacacgtatagttgtatatatttcacaaat-tttttgaataagac 178
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 179 gaacggtcaaatatgtgctaaagagtcaacggtgtcaaacatttt 223
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||| ||||| |||||||||| || |||| |||||||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacacacgctaaaaagttaatggtggcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 27 tccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttat 86
|||||||||||||||||||||| ||||||| ||||| | || ||||||| ||||||||||
Sbjct: 231 tccattttaaaatgtttgacaccgttgactctttagcacatatttgaccgttcgtcttat 172
Query: 87 t 87
|
Sbjct: 171 t 171
>RF01058;MIR806;AP008209.1/32847449-32847678 39947:Oryza sativa
Japonica Group
Length = 230
Score = 143 bits (72), Expect = 2e-33
Identities = 121/135 (89%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgt--acatatagttttacatatttt 175
|||||||||| ||||| ||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 90 catatcatttaattcattgttaaatatactttcatatacacatatagttttacatatttc 149
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
| | | ||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 150 a-tattttttttaaataagacgaacggttaaacatgtgctaaaaagtcaatggtgtcaaa 208
Query: 236 cattttgaaacggag 250
||||||||||||||
Sbjct: 209 tattttgaaacggag 223
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 26 ctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctta 85
|||| ||| ||||| |||||||| |||||||||||| | |||||| ||| |||||||||
Sbjct: 223 ctccgtttcaaaatatttgacaccattgactttttagcacatgtttaaccgttcgtctta 164
Query: 86 tt 87
||
Sbjct: 163 tt 162
>RF01058;MIR806;ABRL01000028.1/4020-3780 65489:Oryza barthii
Length = 241
Score = 143 bits (72), Expect = 2e-33
Identities = 121/135 (89%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatata--gttttacatattttac 177
|||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||| ||
Sbjct: 101 tatcatttgattcattgttaaatatactttcatgtatatatatagttttacatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtcaaac 236
| | ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||
Sbjct: 161 agaattttttgaataagataaacggtcaaacatgtgcttaaaaagtcaacggtgtcaaac 220
Query: 237 attttgaaacggagg 251
|||| ||||||||||
Sbjct: 221 atttagaaacggagg 235
>RF01058;MIR806;AAAA02024901.1/17755-17517 39946:Oryza sativa Indica
Group
Length = 239
Score = 143 bits (72), Expect = 2e-33
Identities = 117/132 (88%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatatagttttacatattttacaa 179
|||||||||||||| ||||||||||| || || |||||||||| |||||||||| ||||
Sbjct: 102 tatcatttgattcattgttaaatatacttatatatacatatagtattacatatttcacaa 161
Query: 180 atatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||
Sbjct: 162 aagtttttgaataagacgaacggtcaaatatgtgctaaaaagtcaatagtgtcaaatatt 221
Query: 240 ttgaaacggagg 251
| ||||||||||
Sbjct: 222 tagaaacggagg 233
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||||||| ||| |||| |||||||| |||||||||||| | || ||||||| |||||
Sbjct: 236 ctccctccgtttctaaatatttgacactattgactttttagcacatatttgaccgttcgt 177
Query: 82 cttatt 87
||||||
Sbjct: 176 cttatt 171
>RF01058;MIR806;AP008209.1/27425695-27425457 39947:Oryza sativa
Japonica Group
Length = 239
Score = 143 bits (72), Expect = 2e-33
Identities = 117/131 (89%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| || ||||| ||||||||| ||||||||||||
Sbjct: 103 tatcatttgattcattgttaaatatacttatatgtatacatatagttctacatattttac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct: 163 aaaagttttttaataagacgaacggttaaacatatgctgaaaagtcaacggtgtcaaata 222
Query: 238 ttttgaaacgg 248
||| |||||||
Sbjct: 223 tttagaaacgg 233
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| |||||||||| || |||||||| ||| |||||||||||
Sbjct: 225 aaatatttgacaccgttgacttttcagcatatgtttaaccgttcgtcttatt 174
>RF01058;MIR806;AP003517.3/100961-100723 39947:Oryza sativa Japonica
Group
Length = 239
Score = 143 bits (72), Expect = 2e-33
Identities = 190/232 (81%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |||
Sbjct: 2 tactccctcggttttaaaatgtttgacaccgttgactttctagtatatgtttgaccgttc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| |||||||||||||||| |||||||||||||| |||||
Sbjct: 62 gtcttattaaaaaaatttaagtaattatttattcttttcatatcatttgatttgttgtta 121
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||||| ||||||| ||| |||||||| |||| ||||| |||||||||
Sbjct: 122 aatatactttcatgtacacatataatttcacatatttcacaa--tttttttaataagacg 179
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
|| ||||||| | | |||||| || |||||||| ||| |||| ||||||||
Sbjct: 180 aatggttaaatacgcactaaaacgttaacggtgttaaatatttcgaaacgga 231
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||| |||||| | ||| ||||||||||||||||||||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacatatactagaaagtcaacggtgtcaaacatttta 16
Query: 243 aaacggaggaagta 256
|||| |||| ||||
Sbjct: 15 aaaccgagggagta 2
>RF01058;MIR806;AAAA02020686.1/40683-40933 39946:Oryza sativa Indica
Group
Length = 251
Score = 141 bits (71), Expect = 6e-33
Identities = 122/138 (88%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 122 tcatttgattcactgttaaatatattttcatgta--catatagttttacatattttacaa 179
|||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| | ||
Sbjct: 114 tcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcataa 173
Query: 180 atatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
| |||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 174 aagttttcgaataagacgaacggtcaaacatgtgctaaaaagtcaatggtgccaaacatt 233
Query: 240 ttgaaacggaggaagtat 257
| |||| ||||| |||||
Sbjct: 234 tcgaaatggagggagtat 251
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||||| ||||||||| ||| |||||||||||| | |||||||||| ||
Sbjct: 251 atactccctccatttcgaaatgtttggcaccattgactttttagcacatgtttgaccgtt 192
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 191 cgtcttatt 183
>RF01058;MIR806;AACV01001351.1/16768-16517 39947:Oryza sativa
Japonica Group
Length = 252
Score = 141 bits (71), Expect = 6e-33
Identities = 110/122 (90%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 137 ttaaatatattttcatgta--catatagttttacatattttacaaatatttttgaataag 194
||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 130 ttaaatatactttcatgtttgcatatagttttacatattttataaaatattttgaataag 189
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaag 254
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 190 acgaacggttaaacatgtattaaaaagtcaacagtgtcaaacattttgaaacggagggag 249
Query: 255 ta 256
||
Sbjct: 250 ta 251
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||||||||||||| |||||||||||| || |||||| ||| |||
Sbjct: 251 tactccctccgtttcaaaatgtttgacactgttgactttttaatacatgtttaaccgttc 192
Query: 80 gtcttatt 87
||||||||
Sbjct: 191 gtcttatt 184
Score = 58.0 bits (29), Expect = 7e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 202 gttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggag 250
|||||| ||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 63 gttaaatatgtgctaaaaagtcaacggtatcaaa-atttagaaacggag 16
>RF01058;MIR806;AACV01009276.1/75685-75925 39947:Oryza sativa
Japonica Group
Length = 241
Score = 141 bits (71), Expect = 6e-33
Identities = 191/231 (82%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccat 77
||||||||||| ||| |||||||||||||| ||||||||||| |||| | |||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgacttttttagtacgtatttgaccat 60
Query: 78 tcgtcttattnnnnnnn-tttaagtaattatttannnnnnncatatcatttgattcactg 136
|||||||||| |||||||||||||||| |||||||||||||||| |
Sbjct: 61 tcgtcttattcaaaaaaatttaagtaattatttattcttttcatatcatttgattcatta 120
Query: 137 ttaaatatattttcatgt--acatatagttttacatattttacaaatatttttgaataag 194
|||||||||||||||||| |||||||||||||||||||| || | ||||| ||||||
Sbjct: 121 ttaaatatattttcatgtacacatatagttttacatattt--cataatttttttaataag 178
Query: 195 acgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaa 245
||||| ||||||| | |||||||||||| || | || |||||||||||||
Sbjct: 179 acgaatggttaaatacgtgctaaaaagttaaggccgttaaacattttgaaa 229
Score = 89.7 bits (45), Expect = 2e-17
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaa-gtcaacggtgtcaaac 236
|||| ||||||||||||||||| ||| ||| | || ||||||| ||||||||||||||||
Sbjct: 81 aaatttttttgaataagacgaatggtcaaatacgtactaaaaaagtcaacggtgtcaaac 22
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 21 attttgaaacggagggagtat 1
>RF01058;MIR806;AC111015.2/40203-40442 39947:Oryza sativa Japonica
Group
Length = 240
Score = 141 bits (71), Expect = 6e-33
Identities = 119/134 (88%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||| ||| ||||||||||| ||| ||||| |||||||||||| |||||| ||
Sbjct: 101 tatcatttgaatcattgttaaatatacttttatgtatacatatagttttatatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| | ||||||||||||||||||| | |||||| | ||||||||||||||||||||||||
Sbjct: 161 aattttttttgaataagacgaacgatcaaacatatactaaaaagtcaacggtgtcaaaca 220
Query: 238 ttttgaaacggagg 251
||| ||||||||||
Sbjct: 221 tttagaaacggagg 234
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||| ||| ||||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 236 tccctccgtttctaaatgtttgacaccgttgactttttagtatatgtttgatcgttcgtc 177
Query: 83 ttatt 87
|||||
Sbjct: 176 ttatt 172
Score = 48.1 bits (24), Expect = 7e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||| ||| |||||||||||| ||||| | ||||| |||||| |||| |
Sbjct: 75 ttttttaataagatgaatggttaaacatgtttaaaaaatttaacggcgtcaaatatttag 16
Query: 243 aaacggag 250
||||||||
Sbjct: 15 aaacggag 8
>RF01058;MIR806;AC116601.1/158497-158738 39947:Oryza sativa Japonica
Group
Length = 242
Score = 141 bits (71), Expect = 6e-33
Identities = 95/103 (92%)
Strand = Plus / Plus
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 139 tacatatagttttacatattttacaaaagtttttgaataagacgaacggtcaaacatgtg 198
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||||||||||| ||||||| ||| |||||||||| ||||
Sbjct: 199 ctaaaaagtcaacgctgtcaaatgtttagaaacggagggagta 241
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||| ||||||| ||||||||||||| | |||||||||| |||
Sbjct: 241 tactccctccgtttctaaacatttgacagcgttgactttttagcacatgtttgaccgttc 182
Query: 80 gtcttatt 87
||||||||
Sbjct: 181 gtcttatt 174
>RF01058;MIR806;AAAA02007727.1/39772-40015 39946:Oryza sativa Indica
Group
Length = 244
Score = 141 bits (71), Expect = 6e-33
Identities = 186/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 25 cctccattttaaaatgtttgacacggttgacttttt--agtatatgtttgaccattcgtc 82
|||| |||| |||||||||||||| ||||| ||||| | || ||||| |||||||||
Sbjct: 8 cctctatttcaaaatgtttgacaccgttgatttttttaattacgtgtttaaccattcgtt 67
Query: 83 ttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaaat 142
||||| |||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 68 ttattcaaaaaatttaagtaattatttattcttttcatatcatttgattctttgttaaat 127
Query: 143 atattttcatgtaca--tatagttttacatattttacaaatatttttgaataagacgaac 200
||| ||| || |||| ||||||||||||||||| |||||| ||||| ||||||| ||||
Sbjct: 128 atacttttatatacacctatagttttacatatttcacaaatttttttaaataagatgaac 187
Query: 201 ggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacg 247
||| |||||| ||||||||| |||| ||||||||||||||| |||||
Sbjct: 188 ggtcaaacatatgctaaaaattcaatggtgtcaaacattttaaaacg 234
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 31 ttttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||||||| |||| ||||||| |||||||||||| ||| |||||||
Sbjct: 232 ttttaaaatgtttgacaccattgaatttttagcatatgtttgaccgttcatcttatt 176
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgct--aaaaagtcaacggtgtcaaacattt 240
||||||||||| ||||| ||||||||| || | ||||| |||||||||||||||||||
Sbjct: 78 tttttgaataaaacgaatggttaaacacgtaattaaaaaaatcaacggtgtcaaacattt 19
Query: 241 tgaaa 245
|||||
Sbjct: 18 tgaaa 14
>RF01058;MIR806;AP006548.1/55205-54965 39947:Oryza sativa Japonica
Group
Length = 241
Score = 141 bits (71), Expect = 6e-33
Identities = 195/240 (81%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||| ||
Sbjct: 1 atacttcctccgtttcaaaatatttgacgtcgttgacttttttaaatatgtttgaccgtt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| |||||||||||||| | |||||||||||||| ||||
Sbjct: 61 cgtcttattaaaaaaatttaagtaattattaattttttttctatcatttgattcattgtt 120
Query: 139 aaatatattttcatgta--catatagttttacatattttacaaatatttttgaataagac 196
||| ||| || ||||| |||||||||||| |||||| |||| |||| |||||||||
Sbjct: 121 aaaaatacttatatgtatacatatagttttatatatttcgcaaaagttttggaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||||||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||
Sbjct: 181 gaacggttaaacatgtgctaaaaagtcaacggcgtcaaatatttagaaacggagggagta 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||||||| |||||| | |||||||||||| |||||| ||||||
Sbjct: 75 ttttttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatattttg 16
Query: 243 aaacggaggaagtat 257
|||||||||||||||
Sbjct: 15 aaacggaggaagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||| | ||||||||||||| | |||||| ||| |||
Sbjct: 240 tactccctccgtttctaaatatttgacgccgttgactttttagcacatgtttaaccgttc 181
Query: 80 gtcttatt 87
||||||||
Sbjct: 180 gtcttatt 173
>RF01062;MIR812;AACV01011310.1/6443-6270 39947:Oryza sativa Japonica
Group
Length = 174
Score = 139 bits (70), Expect = 2e-32
Identities = 134/159 (84%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 159 tgtttgaccattcgtcttattcaaaaattttaagtaattatttattcttttcatatcatt 100
Query: 127 tgattcactgttaaatatattttcatgtaca--tatagttttacatattttacaaatatt 184
||||||| | ||||||||| ||||| ||||| ||||||||||||||||| | ||| ||
Sbjct: 99 tgattcattattaaatatactttcacgtacacatatagttttacatatttcataaaattt 40
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||||||||||||||||| |||||||||||||||||||
Sbjct: 39 tttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | |||||||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttatt 35
>RF01058;MIR806;AAAA02023212.1/740-981 39946:Oryza sativa Indica
Group
Length = 242
Score = 139 bits (70), Expect = 2e-32
Identities = 125/141 (88%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaggcatatcattttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaac 236
||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||
Sbjct: 162 aaaagtttttgaataagacgaacggttaaacatgtacttaaaaagtcaacggtgccaact 221
Query: 237 attttgaaacggaggaagtat 257
||||| ||||||||| |||||
Sbjct: 222 attttaaaacggagggagtat 242
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccat 77
||||||||||| ||||||||| ||| ||| ||||||||||| |||| |||||| ||| |
Sbjct: 242 atactccctccgttttaaaatagttggcaccgttgactttttaagtacatgtttaaccgt 183
Query: 78 tcgtcttatt 87
||||||||||
Sbjct: 182 tcgtcttatt 173
>RF01058;MIR806;AACV01015343.1/28803-28568 39947:Oryza sativa
Japonica Group
Length = 236
Score = 139 bits (70), Expect = 2e-32
Identities = 109/121 (90%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatatagttttacatattttacaa 179
|||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||| ||||
Sbjct: 101 tatcatttgattcattgttaaatatacttttatg--catatagttttacatatttcacaa 158
Query: 180 atatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 239
| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 159 aagtttttgaataagacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaacatt 218
Query: 240 t 240
|
Sbjct: 219 t 219
>RF01058;MIR806;AAAA02009498.1/6852-7093 39946:Oryza sativa Indica
Group
Length = 242
Score = 139 bits (70), Expect = 2e-32
Identities = 125/141 (88%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatattttat 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaac 236
||| ||||| |||||||||||||||| |||||| ||| |||||| |||||||||||||||
Sbjct: 162 aaaaattttcgaataagacgaacggtcaaacatatgcttaaaaaatcaacggtgtcaaac 221
Query: 237 attttgaaacggaggaagtat 257
|||| ||| ||||| |||||
Sbjct: 222 atttcaaaatggagggagtat 242
Score = 83.8 bits (42), Expect = 1e-15
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccat 77
|||||||||||||||| ||||||||||||| ||||| ||||| || |||||||||||| |
Sbjct: 242 atactccctccattttgaaatgtttgacaccgttgattttttaagcatatgtttgaccgt 183
Query: 78 tcgtcttatt 87
||||||||||
Sbjct: 182 tcgtcttatt 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||||||| ||| |||| |||| || || || ||||||||||| |
Sbjct: 75 tttttgaataagacgaacggtcaaatatgtttaaaaatgttaatggcgtcaaacatttcg 16
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;AAAA02031464.1/18598-18832 39946:Oryza sativa Indica
Group
Length = 235
Score = 139 bits (70), Expect = 2e-32
Identities = 124/141 (87%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttta 176
||||||||||||||| ||||||||||||||| ||||| |||||| ||||| |||| | |
Sbjct: 95 atatcatttgattcattgttaaatatatttttatgtaggcatataattttatatatctca 154
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| |||||||||||||||||| || ||| ||||||||||||||||||||||||||||
Sbjct: 155 taaaagtttttgaataagacgaacagtcaaaaatgtgctaaaaagtcaacggtgtcaaac 214
Query: 237 attttgaaacggaggaagtat 257
|||| |||| ||||| |||||
Sbjct: 215 atttcgaaatggagggagtat 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||||| ||||||||||||| ||||||||||||| | || |||||| ||
Sbjct: 235 atactccctccatttcgaaatgtttgacaccgttgactttttagcacatttttgactgtt 176
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 175 cgtcttatt 167
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacg 227
||||| ||||||||||||| | |||||| || |||||||||||||
Sbjct: 69 tttttaaataagacgaacgataaaacatttgataaaaagtcaacg 25
>RF01058;MIR806;AAAA02036553.1/4131-3892 39946:Oryza sativa Indica
Group
Length = 240
Score = 139 bits (70), Expect = 2e-32
Identities = 192/235 (81%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| ||| ||||| ||||||| ||| ||||||| ||| ||||||||||||
Sbjct: 1 atactccctctgtttcaaaatatttgacatcgttaactttttggtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||| ||||| |||||||||| |||||||||||||| | ||||
Sbjct: 61 tatcttattcaaaaaatttaaataattatttattcttttcatatcatttgatttattgtt 120
Query: 139 aaatatattttcatgtacatat--agttttacatattttacaaatatttttgaataagac 196
||||||| |||||| |||| || |||||||||||||| || || ||||||||||||||
Sbjct: 121 aaatatactttcatatacacatgtagttttacatatttcaccaacttttttgaataagac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||| || ||| ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 181 gaacagtcaaagatgtgctaaaaagtcaacggtatcaaaca-tttgaaacggagg 234
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| || ||| ||||| || | ||||||| |||| ||||||| ||||||
Sbjct: 75 tttttgaataagataaatggtcaaacacgtaccaaaaagttaacgatgtcaaatattttg 16
Query: 243 aaacggaggaagtat 257
|||| |||| |||||
Sbjct: 15 aaacagagggagtat 1
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| || ||||||||||||| | || |||||| |||||||||||
Sbjct: 224 aaatgtttgataccgttgactttttagcacatctttgactgttcgtcttatt 173
>RF01058;MIR806;ABRL01000721.1/4249-4012 65489:Oryza barthii
Length = 238
Score = 139 bits (70), Expect = 2e-32
Identities = 121/136 (88%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
|||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 99 catatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttc 158
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
|||| | |||| ||||||||| ||||| |||||||||||||||||||||| || |||||
Sbjct: 159 acaattttttt--aataagacggacggtcaaacatgtgctaaaaagtcaacagtatcaaa 216
Query: 236 cattttgaaacggagg 251
||||| ||||||||||
Sbjct: 217 catttagaaacggagg 232
Score = 58.0 bits (29), Expect = 7e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 23 tccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtc 82
||||||| ||| |||||||||| || ||||||||||||| | |||||||||| | ||||
Sbjct: 234 tccctccgtttctaaatgtttgatactgttgactttttagcacatgtttgaccgtccgtc 175
Query: 83 ttatt 87
|||||
Sbjct: 174 ttatt 170
>RF01058;MIR806;AAAA02021826.1/21037-21276 39946:Oryza sativa Indica
Group
Length = 240
Score = 139 bits (70), Expect = 2e-32
Identities = 118/133 (88%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttac 177
|||||||||||||| ||||||||||| || ||||||| ||||||||||||| ||||||
Sbjct: 101 tatcatttgattcattgttaaatatacttatatgtacacatatagttttacatgttttac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| |
Sbjct: 161 aaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagtcaagggtgtcaaata 220
Query: 238 ttttgaaacggag 250
||| |||| ||||
Sbjct: 221 tttagaaatggag 233
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||||||| |||| |||||||| |||||||||||| | ||||||||||||||
Sbjct: 239 tactcactccatttctaaatatttgacacccttgactttttagcacatgtttgaccattc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
>RF01058;MIR806;AAAA02006403.1/1537-1777 39946:Oryza sativa Indica
Group
Length = 241
Score = 139 bits (70), Expect = 2e-32
Identities = 124/141 (87%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||| |
Sbjct: 101 atatcatttaattcattgttaaatatattttcatgtacacatatagttttatatatttca 160
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| | ||||| ||||| ||||||||| ||| || ||||||||||| ||| ||||||||
Sbjct: 161 caattttttttaaataaaacgaacggtcaaatatatgctaaaaagttaacagtgtcaaat 220
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 221 attttgaaacggagggagtat 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||| |||||||| ||| ||||||||| |||| ||||||| ||
Sbjct: 241 atactccctccgtttcaaaatatttgacactgttaactttttagcatatatttgaccgtt 182
Query: 79 cgtcttatt 87
||| |||||
Sbjct: 181 cgttttatt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
|||||||||||||| || |||||| | || || |||||| ||| ||||||||||||||
Sbjct: 75 tttttgaataagacaaatcgttaaatacgtactcaaaagttaactttgtcaaacattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AAAA02026229.1/38478-38703 39946:Oryza sativa Indica
Group
Length = 226
Score = 139 bits (70), Expect = 2e-32
Identities = 167/199 (83%), Gaps = 5/199 (2%)
Strand = Plus / Plus
Query: 56 tttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnn 115
||||||||| ||||||||||||||||||||| || |||||||||||||
Sbjct: 24 tttttagtacgtgtttgaccattcgtcttattaaaaaaatt-aagtaattatttattatt 82
Query: 116 nncatatcatttgattcactgttaaatatattttcatgta--catatagttttacatatt 173
|||||||||||||| | ||||||||||| |||||| || |||||||||||| |||||
Sbjct: 83 ttcatatcatttgatttattgttaaatatactttcatatatacatatagttttatatatt 142
Query: 174 ttacaaatatttttgaataagacgaacggttaaacatgtgct-aaaaagtcaacggtgtc 232
| |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||| |||
Sbjct: 143 tcacaaat-tttttaaataagacgaacggtcaaacatgtgctaaaaaaatcaacggagtc 201
Query: 233 aaacattttgaaacggagg 251
||| |||||||||||||||
Sbjct: 202 aaatattttgaaacggagg 220
>RF01058;MIR806;AACV01022578.1/12222-12463 39947:Oryza sativa
Japonica Group
Length = 242
Score = 139 bits (70), Expect = 2e-32
Identities = 109/121 (90%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||
Sbjct: 99 tatcatttgattcattgttaaatatactttcatgtatacatatagttttacatattacac 158
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| | |||||
Sbjct: 159 aaatttttttgaataagacgaacggtcaaatatgtgttaaaaagtcaacggtattaaaca 218
Query: 238 t 238
|
Sbjct: 219 t 219
>RF01058;MIR806;AC133860.5/76754-76494 39947:Oryza sativa Japonica
Group
Length = 261
Score = 137 bits (69), Expect = 9e-32
Identities = 112/124 (90%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 136 gttaaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataa 193
|||||||||| |||||| |||| ||||||||||||||||| | |||| |||||||||||
Sbjct: 139 gttaaatatactttcatatacacatatagttttacatatttcataaat-tttttgaataa 197
Query: 194 gacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaa 253
|||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 198 gacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacggaggga 257
Query: 254 gtat 257
||||
Sbjct: 258 gtat 261
Score = 97.6 bits (49), Expect = 8e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 261 atactccctccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccatt 202
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 201 cgtcttatt 193
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgac 74
|||||||| |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 3 ctccctccgttttaaaatgtttgacaccgttgactttttagtatgtgtttgac 55
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggagg 251
|||||||||||||||||||||||||||| |||||||||
Sbjct: 43 ctaaaaagtcaacggtgtcaaacattttaaaacggagg 6
>RF01058;MIR806;AAAA02007552.1/7379-7618 39946:Oryza sativa Indica
Group
Length = 240
Score = 137 bits (69), Expect = 9e-32
Identities = 111/124 (89%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 101 tatcatttgattcattgttaaatatatttatatgtatacatatagttttacatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|| ||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 161 caacttttttgaattagacgaacggtcaaatatatgctaaaaagtcaacggtgtcaaaca 220
Query: 238 tttt 241
||||
Sbjct: 221 tttt 224
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 32 tttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtct 83
||||||||||||||||| ||||||||||||| |||| ||||||| |||||||
Sbjct: 227 tttaaaatgtttgacaccgttgactttttagcatatatttgaccgttcgtct 176
Score = 48.1 bits (24), Expect = 7e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||| |||||| | ||||||||||||| | |||| |||| ||||||||||||||||
Sbjct: 60 aacggtcaaacatattttaaaaagtcaacgacggcaaatatttagaaacggaggaagtat 1
>RF01058;MIR806;AP008218.1/2341667-2341904 39947:Oryza sativa
Japonica Group
Length = 238
Score = 137 bits (69), Expect = 9e-32
Identities = 123/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | | ||||||||||||| ||||| |||||| ||||| |||||| ||
Sbjct: 99 tatcatttgatttattattaaatatatttttatgtaggcatataattttatatatttcac 158
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |
Sbjct: 159 aaaagtttttgaataagacaaacggttaaacatatgctaaaaagttaacggtgtcaaata 218
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 219 tttcgaaacggagggagtat 238
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| |||||||| ||| ||||||||| |||||||| ||| ||
Sbjct: 238 atactccctccgtttcgaaatatttgacaccgttaactttttagcatatgtttaaccgtt 179
Query: 79 cgtcttatt 87
||||||||
Sbjct: 178 tgtcttatt 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||| |||||||| ||||||| | ||||||||||| |||||||||||||
Sbjct: 72 tttttgaataatacgaacggctaaacatatttaaaaaagtcaacaccgtcaaacattttg 13
Query: 243 aaa 245
|||
Sbjct: 12 aaa 10
>RF01058;MIR806;AAAA02035408.1/6482-6708 39946:Oryza sativa Indica
Group
Length = 227
Score = 137 bits (69), Expect = 9e-32
Identities = 166/202 (82%), Gaps = 2/202 (0%)
Strand = Plus / Plus
Query: 40 gtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaa 99
||||||||| |||||||||||| |||| ||||||| ||||||||||| |||||
Sbjct: 13 gtttgacaccgttgactttttaaaatatatttgaccgttcgtcttattcaaaaaatttaa 72
Query: 100 gtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta--ca 157
| ||||||| | |||| ||||||||||| ||||||||||| ||| || || ||
Sbjct: 73 gcaattattaattcttttcataccatttgattcattgttaaatatacttttatatataca 132
Query: 158 tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgctaa 217
||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||
Sbjct: 133 tatagttttacatatttcataaaagtttttgaataagacgaacggttaaacatgtttaaa 192
Query: 218 aaagtcaacggtgtcaaacatt 239
||||||||||| ||||||||||
Sbjct: 193 aaagtcaacggcgtcaaacatt 214
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||||||||||||||||||||| ||| || | ||||||||||||||||||||||
Sbjct: 66 tttttgaataagacgaacggtcaaatatattttaaaaagtcaacggtgtcaaac 13
>RF01058;MIR806;AAAA02032598.1/5908-6144 39946:Oryza sativa Indica
Group
Length = 237
Score = 137 bits (69), Expect = 9e-32
Identities = 123/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||| || || ||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 98 tatcatttaatccattgttaaatatactttcatgtatacatatagttttacatatttcat 157
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||| |||||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 158 aaaatttttggaataagacgaacggtcaaacatatgctaaaaagtcaacggtatcaaaca 217
Query: 238 ttttgaaacggaggaagtat 257
|| |||||||||| |||||
Sbjct: 218 ttcagaaacggagggagtat 237
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||| || ||||||||||||| |||||||||||| ||
Sbjct: 237 atactccctccgtttctgaatgtttgataccgttgactttttagcatatgtttgaccgtt 178
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 177 cgtcttatt 169
>RF01058;MIR806;AP008207.1/41268949-41269190 39947:Oryza sativa
Japonica Group
Length = 242
Score = 137 bits (69), Expect = 9e-32
Identities = 123/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 103 tatcattttattcattgttaaatatatttttatgtatacatatagttttacatatttcac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||| |||||||||| |||||||||||||||||| ||||||| |
Sbjct: 163 aaaagtttttaaataagatgaacggttaagtatgtgctaaaaagtcaacaatgtcaaata 222
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 223 tttagaaacggagggagtat 242
>RF01058;MIR806;AP008218.1/24184224-24184439 39947:Oryza sativa
Japonica Group
Length = 216
Score = 137 bits (69), Expect = 9e-32
Identities = 111/124 (89%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 135 tgttaaatatattttcatgta--catatagttttacatattttacaaatatttttgaata 192
||||||||||||||| ||||| |||||| ||||| |||||| ||||| ||||||||||
Sbjct: 92 tgttaaatatatttttatgtaggcatataattttatatatttcacaaaattttttgaata 151
Query: 193 agacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagga 252
||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 152 agacgaacggttaaatatgtactaaaaagtcaacggtgtcaaatatttcgaaacggaggg 211
Query: 253 agta 256
||||
Sbjct: 212 agta 215
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||||| ||||||||||||||| || ||| ||| |||
Sbjct: 215 tactccctccgtttcgaaatatttgacaccgttgactttttagtacatatttaaccgttc 156
Query: 80 gtcttatt 87
||||||||
Sbjct: 155 gtcttatt 148
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 216 aaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||| ||| ||||||| |||||||||| ||||
Sbjct: 42 aaaaagtcaacggcgtcgaacatttcgaaacggagggagta 2
>RF01058;MIR806;BX664712.3/32416-32656 4530:Oryza sativa (rice)
Length = 241
Score = 137 bits (69), Expect = 9e-32
Identities = 108/120 (90%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtacatat--agttttacatatttt 175
|||||||||||||||| ||||||||||| ||| ||||| |||| ||||||||||||||
Sbjct: 100 catatcatttgattcattgttaaatatacttttatgtatatatatagttttacatatttc 159
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||
Sbjct: 160 acaaaattttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacagcgtcaaa 219
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| ||||| || | |||| |||||| ||||||||||||||||||||||||
Sbjct: 75 tttttaaataaaacaagcggtcaaacatatgctaaaaagtcaacggtgtcaaa 23
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||| | ||||||||||||| | |||||||||| |||||||||||
Sbjct: 219 tttgacgctgttgactttttagcacatgtttgaccgttcgtcttatt 173
>RF01062;MIR812;AACV01000759.1/1650-1823 39947:Oryza sativa Japonica
Group
Length = 174
Score = 135 bits (68), Expect = 4e-31
Identities = 99/107 (92%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 107 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcac 48
Query: 178 aaa-tatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 aaaatttttttgaataagacgaacggttaaacatgtgctaaaaagtc 1
>RF01062;MIR812;AP005658.3/58267-58095 39947:Oryza sativa Japonica
Group
Length = 173
Score = 135 bits (68), Expect = 4e-31
Identities = 144/173 (83%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
|||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 173 gactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtatttatttatt 114
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtaca--tatagttttacat 170
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||
Sbjct: 113 cttttcatatcatttgattcattgttaaatatatttttatgtacacatatagttttacat 54
Query: 171 attttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
|||| | |||| || |||||||| ||||||||| |||||||| || |||||||
Sbjct: 53 atttcataaattttattgaataaaacgaacggtcaaacatgtacttaaaagtc 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||||||||||||||| ||| ||||| || ||||||||||
Sbjct: 133 tttttgaataagacgaatggtcaaacacgtactaaaaagtc 173
>RF01062;MIR812;AP008217.1/21142327-21142498 39947:Oryza sativa
Japonica Group
Length = 172
Score = 135 bits (68), Expect = 4e-31
Identities = 145/173 (83%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
||||| |||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 172 gacttcttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttatt 113
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgtaca--tatagttttacat 170
|||||||||||||||| ||||||||||| ||| || |||| |||| ||||||||
Sbjct: 112 attttcatatcatttgattcattgttaaatatacttttatatacacatataattttacat 53
Query: 171 attttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
|||| |||||| ||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 52 atttcacaaattttttt-aataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | |||||||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttatt 35
>RF01058;MIR806;AP008210.1/13174748-13174507 39947:Oryza sativa
Japonica Group
Length = 242
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||| ||| || || ||||||||||||||||||||||
Sbjct: 103 tatcatttgattaattgttaaatatacttttatatatacatatagttttacatattttac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||| |||||||| ||||||| ||||||||||||||||| |||| |||| |
Sbjct: 163 aaaagtttttgaacaagacgaatggttaaatatgtgctaaaaagtcaatggtgccaaata 222
Query: 238 ttttgaaacggaggaagta 256
||| |||||||||| ||||
Sbjct: 223 tttagaaacggagggagta 241
>RF01058;MIR806;AC087543.3/85231-84992 4530:Oryza sativa (rice)
Length = 240
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||| ||| ||||| ||||||||||||||||||| ||
Sbjct: 101 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||| || |||||||| ||||||| ||||| ||||||||||||||||| ||| |
Sbjct: 161 aaatttttttaaaaaagacgaatggttaaagatgtgttaaaaagtcaacggtgttaaata 220
Query: 238 ttttgaaacggaggaagta 256
||| |||||| ||||||||
Sbjct: 221 tttagaaacgaaggaagta 239
>RF01058;MIR806;AAAA02014718.1/60336-60096 39946:Oryza sativa Indica
Group
Length = 241
Score = 135 bits (68), Expect = 4e-31
Identities = 197/241 (81%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttag-tatatgtttgaccatt 78
|||||||||| |||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 2 tactccctcccttttaaaatgtttgacaccgttgactttttaaatacgtgtttgaccatt 61
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
| ||||||| | ||||||||||| || |||| || |||||| |||
Sbjct: 62 catcttatttaaaaaatgtaagtaattatgtagtctggtcatagcaggggattcatggtt 121
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||| ||||||| |||||||||| |||||| |||| | ||||| ||||| ||
Sbjct: 122 aaatatactttgatgtacacatatagttttatatatttcacaatttttttt-aataaaac 180
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||| || ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 181 gaacagtgaaacatgtgttaaaaagtcaacgatgtcaaacattttgaaacggagggagta 240
Query: 257 t 257
|
Sbjct: 241 t 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 43 taaaaagtcaacggtgtcaaacattttaaaagggagggagta 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta 61
||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 241 atactccctccgtttcaaaatgtttgacatcgttgacttttta 199
>RF01058;MIR806;AP008208.1/31541510-31541755 39947:Oryza sativa
Japonica Group
Length = 246
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||||| |||||| ||| |||||||| ||
Sbjct: 107 tatcatttgattcattgttaaatatacttttatgtagacatataatttcacatatttcac 166
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
| | ||||| |||||||| ||||||||||||||||||||||||||||||||| |||| |
Sbjct: 167 acaaattttcaaataagacaaacggttaaacatgtgctaaaaagtcaacggtgccaaata 226
Query: 238 ttttgaaacggaggaagta 256
||| |||||||||| ||||
Sbjct: 227 tttagaaacggagggagta 245
Score = 48.1 bits (24), Expect = 7e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||| ||| ||||||||||||| | |||||| ||| ||
Sbjct: 245 tactccctccgtttctaaatatttggcaccgttgactttttagcacatgtttaaccgttt 186
Query: 80 gtcttatt 87
||||||||
Sbjct: 185 gtcttatt 178
>RF01058;MIR806;CR855021.1/42350-42118 4530:Oryza sativa (rice)
Length = 233
Score = 135 bits (68), Expect = 4e-31
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 155 acatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgc 214
|||||||||||| ||||||| |||||| ||||| ||||||||||||||| ||| ||||||
Sbjct: 131 acatatagttttgcatatttcacaaattttttttaataagacgaacggtcaaatatgtgc 190
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacggaggaag 254
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 191 taaaaagttaacggtgtcaaacattttgaaatggaggaag 230
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 25 cctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtctt 84
||||||||| |||||||||||||| ||| ||||||||| | || ||||||| ||||||||
Sbjct: 227 cctccatttcaaaatgtttgacaccgttaactttttagcacatatttgaccgttcgtctt 168
Query: 85 att 87
|||
Sbjct: 167 att 165
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
|||||||||||||| ||| ||||||| || ||| ||||||||||||||||||||| ||
Sbjct: 103 tatcatttgattcattgtgaaatatacttatatgcatacatatagttttacatatttcac 162
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||||||| ||| |||||||||||||||||| |||||||||||| |
Sbjct: 163 aaaagtttttaaataagacgaatggtcaaacatgtgctaaaaagttaacggtgtcaaata 222
Query: 238 ttttgaaacggaggaagta 256
||| |||||||||| ||||
Sbjct: 223 tttagaaacggagggagta 241
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||||| ||| ||||||||| | ||||||||||||||
Sbjct: 241 tactccctccgtttctaaatatttgacaccgttaactttttagcacatgtttgaccattc 182
Query: 80 gtcttatt 87
||||||||
Sbjct: 181 gtcttatt 174
>RF01058;MIR806;AAAA02018369.1/11191-11429 39946:Oryza sativa Indica
Group
Length = 239
Score = 135 bits (68), Expect = 4e-31
Identities = 199/241 (82%), Gaps = 6/241 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||||||| | || ||||||||||||||| ||||| |||||||
Sbjct: 2 tactccctccgtttcaaaatgtttcaaaccgttgactttttagtacgtgttttaccattc 61
Query: 80 gtcttattnnnnnnn-tttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||| |||||| ||||||||| |||||||||||| ||| ||||
Sbjct: 62 atcttattcaaaaaaatttaaggaattatttattcttttcatatcatttgaatcattgtt 121
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||| ||| |||||||| ||||||| |||||| ||||| | ||||||
Sbjct: 122 aaatatactttcatgcacacatatagtttcacatattc-acaaatttttttta-taagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||| ||||
Sbjct: 180 gaacggtcaaacatgtgctaaaaa-tcaatggtgtcaaacattttgaaacgaagggagta 238
Query: 257 t 257
|
Sbjct: 239 t 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||||||||||| ||| ||| ||||| || |||||||||||||||| | |||||
Sbjct: 80 aaatttttttgaataagatgaatggtaaaacacgtactaaaaagtcaacggtttgaaaca 21
Query: 238 ttttgaaacggaggaagta 256
|||||||||||||| ||||
Sbjct: 20 ttttgaaacggagggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| | ||| |||||||||||||| |||| ||||||| | |||||||||| ||
Sbjct: 239 atactcccttcgtttcaaaatgtttgacaccattga-tttttagcacatgtttgaccgtt 181
Query: 79 cgtcttat 86
||||||||
Sbjct: 180 cgtcttat 173
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttac 177
|||||||||||||| ||||||||||| || ||||| | |||||||||||||||| ||
Sbjct: 102 tatcatttgattcattgttaaatatacttatatgtatacgtatagttttacatattccac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |
Sbjct: 162 aaaaatttttgaataagacgaacggtcaaatatgtggtaaaaagttaacggtgtcaaata 221
Query: 238 ttttgaaacggaggaagta 256
||| |||||||||| ||||
Sbjct: 222 tttagaaacggagggagta 240
Score = 48.1 bits (24), Expect = 7e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||||| ||| |||||||| | || ||||||| |||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttaccacatatttgaccgttc 181
Query: 80 gtcttatt 87
||||||||
Sbjct: 180 gtcttatt 173
>RF01058;MIR806;AAAA02016981.1/697-450 39946:Oryza sativa Indica
Group
Length = 248
Score = 135 bits (68), Expect = 4e-31
Identities = 87/92 (94%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||
Sbjct: 146 tacatatagttttacatatttcacaaattttttt-aataagacgaacggttaaacatatg 204
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaa 245
||||||||| ||||||||||||||||||||||
Sbjct: 205 ctaaaaagttaacggtgtcaaacattttgaaa 236
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||||||| |||| |||||||||||||| ||| ||||||||| |||||||| ||| |||
Sbjct: 247 tactccctctatttcaaaatgtttgacaccgttaactttttagcatatgtttaaccgttc 188
Query: 80 gtcttatt 87
||||||||
Sbjct: 187 gtcttatt 180
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacattttgaaa 245
||||||||||| ||||| |||||||||||||
Sbjct: 43 taaaaagtcaatggtgttaaacattttgaaa 13
>RF01058;MIR806;AP004085.3/55050-55290 39947:Oryza sativa Japonica
Group
Length = 241
Score = 135 bits (68), Expect = 4e-31
Identities = 122/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 102 tatcatttgattcatggttaaatatatttatatgtatacatatagttttacatatttcat 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||| | |||||| ||| || ||||||||||||||||||||||||||||||| |
Sbjct: 162 aaattttttttagtaagacaaacagtcaaacatgtgctaaaaagtcaacggtgtcaaata 221
Query: 238 ttttgaaacggaggaagta 256
||| |||||||||| ||||
Sbjct: 222 tttggaaacggagggagta 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgac 74
|||||||||| ||| |||| |||||||| ||||||||||||| | |||||||||
Sbjct: 240 tactccctccgtttccaaatatttgacaccgttgactttttagcacatgtttgac 186
>RF01062;MIR812;AC091665.3/17500-17326 4530:Oryza sativa (rice)
Length = 175
Score = 133 bits (67), Expect = 1e-30
Identities = 97/106 (91%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 106 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatattttac 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||| ||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 46 aaaagtttttgaataagacgaacggtcaaacatatgctaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaa 220
|||||||||||||| |||||| ||||||||||||||||
Sbjct: 135 tttttgaataagacaaacggtcaaacatgtgctaaaaa 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| |||||||||||| |||||||||||
Sbjct: 1 gactttttagcatatgtttgaccgttcgtcttatt 35
>RF01058;MIR806;CR855238.1/21532-21767 4530:Oryza sativa (rice)
Length = 236
Score = 133 bits (67), Expect = 1e-30
Identities = 106/118 (89%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||||||| ||
Sbjct: 97 tatcatttgattcattgttaaatatacttttatgcatacgtatagttttacatatttcac 156
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||| ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 157 aaaagtttttgaataagacgaacggtcaaacatgtactaaaaagtcaacagtgtcaaa 214
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||| ||||||||||||||| |||||||||| |||||||||||
Sbjct: 214 tttgacactgttgactttttagtacatgtttgaccgttcgtcttatt 168
>RF01058;MIR806;ABRL01001931.1/4966-5201 65489:Oryza barthii
Length = 236
Score = 133 bits (67), Expect = 1e-30
Identities = 196/241 (81%), Gaps = 7/241 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||||| ||||||||||| ||| | || || || ||||||| ||||
Sbjct: 1 atactccctccgttttaatatgtttgacaccgttaatttctttttag-tgtttgatcatt 59
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||||| ||||| || ||||||| |||||||||||||||| ||||
Sbjct: 60 cgtcttattcaaaatatttaattatttatttatttttttcatatcatttgattcattgtt 119
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| ||||||||||| ||||||||||||||||| ||||| | ||| ||||||||
Sbjct: 120 aaatatactttcatgtacacatatagttttacatatttcacaaaaaaatttaaataagac 179
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
||| ||| ||| |||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 180 gaatggt----catatgctaaaaagtcaacggtgtcaaatattttaaaacggagggagta 235
Query: 257 t 257
|
Sbjct: 236 t 236
Score = 71.9 bits (36), Expect = 5e-12
Identities = 61/69 (88%), Gaps = 4/69 (5%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||||||||| |||||||| ||||||||||||| ||| ||||||||
Sbjct: 236 atactccctccgttttaaaatatttgacaccgttgactttttagcata----tgaccatt 181
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 180 cgtcttatt 172
>RF01058;MIR806;AACV01004906.1/16108-16348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 133 bits (67), Expect = 1e-30
Identities = 103/114 (90%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 124 atttgattcactgttaaatatattttcatg--tacatatagttttacatattttacaaat 181
|||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 106 atttgattcattgttaaatatacttttatgcatacatatagttttacatatttcacaaaa 165
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
|||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct: 166 gtttttgaataagacgagcagtcaaacatgtgctaaaaagtcaacggtgtcaaa 219
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtg 213
|||||||||||||||| |||| |||||||||
Sbjct: 75 tttttgaataagacgagcggtaaaacatgtg 45
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||| ||||||||||||| | ||||||||| ||||||||||
Sbjct: 219 tttgacaccgttgactttttagcacatgtttgactgctcgtcttatt 173
>RF01058;MIR806;AAAA02028059.1/772-1013 39946:Oryza sativa Indica
Group
Length = 242
Score = 133 bits (67), Expect = 1e-30
Identities = 119/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaagcatataattttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaac 236
||| ||||||||||| ||||||||| |||||| | | ||||||||||||||||| ||||
Sbjct: 162 aaaagtttttgaataaaacgaacggtcaaacatttacttaaaaagtcaacggtgttaaac 221
Query: 237 attttgaaacggag 250
|||| |||||||||
Sbjct: 222 atttcgaaacggag 235
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttt-agtatatgtttgaccat 77
|||||| |||| ||| |||||||| |||| ||||||||||| |||| |||||||||| |
Sbjct: 242 atactctctccgtttcgaaatgtttaacaccgttgactttttaagtaaatgtttgaccgt 183
Query: 78 tcgtcttatt 87
|||| |||||
Sbjct: 182 tcgttttatt 173
>RF01058;MIR806;AP005460.3/5216-5454 39947:Oryza sativa Japonica
Group
Length = 239
Score = 133 bits (67), Expect = 1e-30
Identities = 191/237 (80%)
Strand = Plus / Plus
Query: 21 actccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcg 80
||||| ||||||| |||| |||||| | ||||||||||| |||||||| ||| ||||
Sbjct: 3 actccatccatttctaaatatttgacgccgttgacttttttaaatatgtttaacccttcg 62
Query: 81 tcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaa 140
| ||||| |||||||||||||| | | ||||||| ||||| ||||||
Sbjct: 63 ttttatttataaaatttaagtaattattaattattttcctatcattagattccttgttaa 122
Query: 141 atatattttcatgtacatatagttttacatattttacaaatatttttgaataagacgaac 200
||||| || || ||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 123 atatacttatatatacatatagttttacatatttcacaaaagtttttaaataagacgaac 182
Query: 201 ggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||| |||||| ||||||||| |||||||||||||| |||| |||| ||||| |||||
Sbjct: 183 ggtcaaacatttgctaaaaaatcaacggtgtcaaatatttagaaatggagggagtat 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||||||| |||| |||||||| ||||| ||||||| | |||||||||| ||
Sbjct: 239 atactccctccatttctaaatatttgacaccgttgattttttagcaaatgtttgaccgtt 180
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AACV01005659.1/15097-14857 39947:Oryza sativa
Japonica Group
Length = 241
Score = 133 bits (67), Expect = 1e-30
Identities = 106/118 (89%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||||||| ||
Sbjct: 102 tatcatttgattcgttgttaaatatacttttatgcatacgtatagttttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 162 aaaaatttttgaataagacgaacggtcaaacatgtgataaaaagtcaacggcgtcaaa 219
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaag 221
|||||||||||||||| |||| |||||||||||||||||
Sbjct: 75 tttttgaataagacgagcggtaaaacatgtgctaaaaag 37
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||| | |||||||||||| | |||||||||| |||||||||||
Sbjct: 219 tttgacgccgttgactttttatcacatgtttgaccgttcgtcttatt 173
>RF01058;MIR806;AACV01022117.1/107-349 39947:Oryza sativa Japonica
Group
Length = 243
Score = 133 bits (67), Expect = 1e-30
Identities = 118/134 (88%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| ||
Sbjct: 104 tatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcac 163
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||| ||||||||| |||||| |||||||||||||| || || ||| |
Sbjct: 164 aaaagtttttgaataaaacgaacggtcaaacatctgctaaaaagtcaatggcgttaaata 223
Query: 238 ttttgaaacggagg 251
||| ||||||||||
Sbjct: 224 tttagaaacggagg 237
Score = 48.1 bits (24), Expect = 7e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacat-gtgctaaaaagtcaacggtgtcaaac 236
|||| ||||| ||||||||||| |||||||||| | |||||||||||| | ||||||
Sbjct: 81 aaattttttttaataagacgaatggttaaacatatttttaaaaagtcaacagcgtcaaat 22
Query: 237 attttgaaacggaggaagta 256
|||| |||||| ||| ||||
Sbjct: 21 atttagaaacgcagggagta 2
>RF01058;MIR806;AAAA02033455.1/9332-9571 39946:Oryza sativa Indica
Group
Length = 240
Score = 133 bits (67), Expect = 1e-30
Identities = 171/208 (82%), Gaps = 3/208 (1%)
Strand = Plus / Plus
Query: 51 ttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattattta 110
|||||||||| |||||||| ||| ||||||||||| |||||||||||||| |
Sbjct: 33 ttgacttttttaaatatgtttaaccgttcgtcttatttaaaaaatttaagtaattattaa 92
Query: 111 nnnnnnncatatcatttgattcactgttaaatatattttcatgta--catatagttttac 168
|||||||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 93 ttcttttcatatcatttgattcattgttaaatatacttatatgtatgcatatagttttac 152
Query: 169 atattttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacgg 228
|||||| ||||| ||||| |||||| ||||| ||| |||||||||||||||||| ||||
Sbjct: 153 atatttcacaaaaatttt-gaataaaacgaatggtcaaacatgtgctaaaaagttgacgg 211
Query: 229 tgtcaaacattttgaaacggaggaagta 256
||||||| |||| |||||||||| ||||
Sbjct: 212 tgtcaaatatttagaaacggagggagta 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| |||| |||||||| || ||||||||| | ||||||||||||||
Sbjct: 239 tactccctccgtttctaaatatttgacaccgtcaactttttagcacatgtttgaccattc 180
Query: 80 gtcttatt 87
|| |||||
Sbjct: 179 gttttatt 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||||||||||||||||| | |||||||||| || |||||| |||| |
Sbjct: 75 tttttaaataagacgaacggttaaacatatttaaaaaagtcaatggcgtcaaatatttag 16
Query: 243 aaa 245
|||
Sbjct: 15 aaa 13
>RF01058;MIR806;AP005285.2/66211-65971 39947:Oryza sativa Japonica
Group
Length = 241
Score = 133 bits (67), Expect = 1e-30
Identities = 118/134 (88%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||||| ||| ||||||||||||||| ||
Sbjct: 102 tatcatttgattcattgttaaatatacttttatgtatacatgtagttttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||||||| ||| ||||||| ||||||||||||||||||| ||| |
Sbjct: 162 aaaagtttttaaataagacgaatggtcaaacatgagctaaaaagtcaacggtgttaaata 221
Query: 238 ttttgaaacggagg 251
||| ||||||||||
Sbjct: 222 tttagaaacggagg 235
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| ||| |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 224 aaatatttaacaccgttgactttttagctcatgtttgaccattcgtcttatt 173
>RF01058;MIR806;AC131343.4/76974-77210 39947:Oryza sativa Japonica
Group
Length = 237
Score = 133 bits (67), Expect = 1e-30
Identities = 124/142 (87%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgtacatat--agttttacatatttt 175
|||||||||||||||| | ||||||||| ||||||||| |||| |||||||| |||||
Sbjct: 96 catatcatttgattcattattaaatatactttcatgtatatatatagttttacttatttc 155
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| | ||| ||||| ||||||||| |||||| ||||||||||| ||||||||||||
Sbjct: 156 acaaaaaaattttaataatacgaacggtcaaacatatgctaaaaagttaacggtgtcaaa 215
Query: 236 cattttgaaacggaggaagtat 257
||||| |||||||||| |||||
Sbjct: 216 catttagaaacggagggagtat 237
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||||| ||| ||||||||| |||||||||||| ||
Sbjct: 237 atactccctccgtttctaaatgtttgacaccgttaactttttagcatatgtttgaccgtt 178
Query: 79 cgtcttatt 87
||| |||||
Sbjct: 177 cgtattatt 169
>RF01058;MIR806;AAAA02006652.1/21120-20860 39946:Oryza sativa Indica
Group
Length = 261
Score = 131 bits (66), Expect = 6e-30
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 166 tacatattttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaa 225
||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 172 tacatattttataaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaa 231
Query: 226 cggtgtcaaacattttgaaacggaggaagt 255
|||||||||| |||| ||||||||||||||
Sbjct: 232 cggtgtcaaatatttagaaacggaggaagt 261
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||||| ||||||||||||| | |||||||||| |||||||||||
Sbjct: 246 aaatatttgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 195
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 131 bits (66), Expect = 6e-30
Identities = 121/138 (87%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatata-ttttcatgtacatatagttttacatattttaca 178
|||||||||||||| | ||||||||| |||| ||||| ||||||||||| |||||| |||
Sbjct: 111 tatcatttgattcatttttaaatatactttttatgtatatatagttttatatatttcaca 170
Query: 179 aatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|| ||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||
Sbjct: 171 aaaatttttgaataagacgaacggttaaacatgtttaaaaacgtcaacagtgtcaaatat 230
Query: 239 tttgaaacggaggaagta 256
|| | |||||||| ||||
Sbjct: 231 ttaggaacggagggagta 248
>RF01058;MIR806;AC210447.1/112690-112455 4538:Oryza glaberrima
(African rice)
Length = 236
Score = 131 bits (66), Expect = 6e-30
Identities = 115/129 (89%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| |
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcat 161
Query: 178 aaatatttt-tgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| |||| ||||||||||||| | | ||||||||||||||||||||||||||| ||||
Sbjct: 162 aaaagttttttgaataagacgaatgatcaaacatgtgctaaaaagtcaacggtgttaaac 221
Query: 237 attttgaaa 245
|||||||||
Sbjct: 222 attttgaaa 230
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| |||||| ||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 75 ttttttaataagacaaacggtaaaatatgtgctaaaaagttaacggcctcaaatattttg 16
Query: 243 aaacggag 250
||||||||
Sbjct: 15 aaacggag 8
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 30 attttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| ||||||||| |||| ||||||||||||| | |||||||| |||||||||||||
Sbjct: 231 atttcaaaatgtttaacaccgttgactttttagcacatgtttgatcattcgtcttatt 174
>RF01058;MIR806;AP003350.3/33008-32769 39947:Oryza sativa Japonica
Group
Length = 240
Score = 131 bits (66), Expect = 6e-30
Identities = 166/203 (81%), Gaps = 2/203 (0%)
Strand = Plus / Plus
Query: 50 gttgactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattattt 109
||||||||||||| | |||||||||| || |||||||| ||||||||||||||
Sbjct: 31 gttgactttttagcacatgtttgaccgtttgtcttatttaaaaaatttaagtaattatta 90
Query: 110 annnnnnncatatcatttgattcactgttaaatatattttcatgta--catatagtttta 167
| | |||||||||||| | |||||| |||||||| ||||| |||||| |||||
Sbjct: 91 attcttttcctatcatttgatttattgttaagtatattttgatgtaggcatataatttta 150
Query: 168 catattttacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacg 227
||||||||| ||| ||||||||||||||||| || |||||||| ||||| |||||| |
Sbjct: 151 catattttataaaagtttttgaataagacgaagtgtcaaacatgtactaaacagtcaatg 210
Query: 228 gtgtcaaacattttgaaacggag 250
|||||||| ||||||||||||||
Sbjct: 211 gtgtcaaatattttgaaacggag 233
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| |||||| ||||||||||||||||||||||| |||| | ||||||
Sbjct: 74 tttttaaataagacaaacggtcaaacatgtgctaaaaagtcaacgacgtcagatattttg 15
Query: 243 aaacggagga 252
|||| |||||
Sbjct: 14 aaactgagga 5
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
||||| |||| ||| ||||| |||||||| |||||| ||||||| ||||||||| |||
Sbjct: 239 tactctctccgtttcaaaatatttgacaccattgactgtttagtacatgtttgacacttc 180
Query: 80 gtcttatt 87
||||||||
Sbjct: 179 gtcttatt 172
>RF01058;MIR806;AAAA02027758.1/1941-1701 39946:Oryza sativa Indica
Group
Length = 241
Score = 131 bits (66), Expect = 6e-30
Identities = 115/129 (89%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 123 catttgattcactgttaaatatattttcatgta--catatagttttacatattttacaaa 180
||||||||||| ||||||||||||||| |||| |||||| |||||||||||| | |||
Sbjct: 106 catttgattcattgttaaatatatttttgtgtaggcatataattttacatatttcataaa 165
Query: 181 tatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||
Sbjct: 166 agttttt-aataagacgaacggtcaaacatgtgctaaaaaatcaatggtgtcaaacattt 224
Query: 241 tgaaacgga 249
|||||||||
Sbjct: 225 tgaaacgga 233
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||| |||| ||||||| | |||||||||| |||||||||||
Sbjct: 225 aaaatgtttgacaccattgattttttagcacatgtttgaccgttcgtcttatt 173
>RF01058;MIR806;AAAA02008185.1/15144-15373 39946:Oryza sativa Indica
Group
Length = 230
Score = 131 bits (66), Expect = 6e-30
Identities = 191/233 (81%), Gaps = 13/233 (5%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttgattttttagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
| ||||||| ||||| |||||||||| ||| ||| || | |||
Sbjct: 61 catcttattcaaaaaatttaaataattatttat--------tat--tttcatatatagtt 110
Query: 139 aaatatattttcatgtacatata--gttttacatattttacaaatatttttgaataagac 196
||||||||||||||||||||| |||||| |||||| |||| | ||||| ||||||||
Sbjct: 111 ttatatattttcatgtacatatatagttttatatatttcacaatttttttt-aataagac 169
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacgga 249
||||||| ||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 170 gaacggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttaaaacgga 222
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| ||| ||| ||||| || ||||||| ||||||||||||||||||||
Sbjct: 75 tttttgaataagatgaatggtcaaacacgtactaaaaaatcaacggtgtcaaacatttta 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 22 ctccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattcgt 81
|||| ||| |||||||||||||||||| ||||||||||||| | ||||||||| |||||
Sbjct: 227 ctccatccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcgt 168
Query: 82 cttatt 87
||||||
Sbjct: 167 cttatt 162
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa Japonica
Group
Length = 240
Score = 131 bits (66), Expect = 6e-30
Identities = 117/133 (87%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||| ||||||||| ||||| |||||||||||| |||||| ||
Sbjct: 101 tatcatttgattcattgttatatatatttttatgtagacatatagttttatatatttcac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||| || |||||||||||| ||||||||||||||||||||| ||||||||| |
Sbjct: 161 aaaagcttttaaaaaagacgaacggtcaaacatgtgctaaaaagtcaatggtgtcaaata 220
Query: 238 ttttgaaacggag 250
||| |||||||||
Sbjct: 221 tttagaaacggag 233
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtctt 84
|||| |||||||| |||||||||||| | |||||||||| ||||||||
Sbjct: 223 aaatatttgacaccattgactttttagcacatgtttgaccgttcgtctt 175
>RF01058;MIR806;AP008207.1/17336421-17336659 39947:Oryza sativa
Japonica Group
Length = 239
Score = 131 bits (66), Expect = 6e-30
Identities = 124/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttac 177
|||||||||||||| ||||||||||| || |||||| | ||||||||||||||||| ||
Sbjct: 99 tatcatttgattcattgttaaatatacttacatgtataaatatagttttacatatttcac 158
Query: 178 aaatatttt-tgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
||| |||| ||||||||||||||||| ||||||||| |||||||| |||| |||||||
Sbjct: 159 aaaagttttttgaataagacgaacggtcaaacatgtgataaaaagttaacgatgtcaaat 218
Query: 237 attttgaaacggaggaagtat 257
|||| ||||||| ||||||||
Sbjct: 219 atttagaaacgggggaagtat 239
>RF01058;MIR806;AP008213.1/9561775-9562013 39947:Oryza sativa
Japonica Group
Length = 239
Score = 131 bits (66), Expect = 6e-30
Identities = 124/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
|||||||||||||||| | ||| ||||| |||||| || |||||||||||||||||||
Sbjct: 99 catatcatttgattcattattacatatactttcatatatacatatagttttacatatttc 158
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
||||| | || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 159 acaaaaaaatta-aataagacaaacggttaaacatgtgctaaaaagtcaacagtgtcaaa 217
Query: 236 cattttgaaacggaggaagta 256
||||| |||||||||| ||||
Sbjct: 218 catttagaaacggagggagta 238
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||||||||||| ||||||||||||| | |||||| ||| ||
Sbjct: 238 tactccctccgtttctaaatgtttgacactgttgactttttagcacatgtttaaccgttt 179
Query: 80 gtcttatt 87
||||||||
Sbjct: 178 gtcttatt 171
>RF01058;MIR806;AAAA02007632.1/1496-1239 39946:Oryza sativa Indica
Group
Length = 258
Score = 131 bits (66), Expect = 6e-30
Identities = 156/187 (83%), Gaps = 4/187 (2%)
Strand = Plus / Plus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 66 tgtttgaccattcgtcttattcaaaaaatttaaataattatttatttttttcatatcatt 125
Query: 127 tgattcactgttaaatatattttcatgt--acatatagttttacatattttacaaatatt 184
||||||| ||||||||||| |||||| | |||||| ||||||||||||| ||||| |||
Sbjct: 126 tgattcattgttaaatatactttcatatacacatatggttttacatatttcacaaa-att 184
Query: 185 tttgaataagacgaacggttaaacatgtgc-taaaaagtcaacggtgtcaaacattttga 243
||| ||||||||||||||| |||||| | | |||||||||||| || ||||| |||||||
Sbjct: 185 ttttaataagacgaacggtcaaacatatacttaaaaagtcaacagtatcaaatattttga 244
Query: 244 aacggag 250
|||||||
Sbjct: 245 aacggag 251
Score = 67.9 bits (34), Expect = 7e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgacttttta-gtatatgtttgaccat 77
|||||| |||| ||| ||||| ||||| || |||||||||||| |||||||||||||| |
Sbjct: 258 atactctctccgtttcaaaatatttgatactgttgactttttaagtatatgtttgaccgt 199
Query: 78 tcgtcttatt 87
||||||||||
Sbjct: 198 tcgtcttatt 189
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 215 taaaaagtcaacggtgtcaaacattttgaaa 245
|||||||||||||| || |||||||||||||
Sbjct: 51 taaaaagtcaacggcgtgaaacattttgaaa 21
>RF01062;MIR812;AP004705.3/25828-26000 39947:Oryza sativa Japonica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 146/174 (83%), Gaps = 4/174 (2%)
Strand = Plus / Minus
Query: 53 gactttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttann 112
|||||||||| |||||||||||||||||||||||| |||||||||||||| |
Sbjct: 173 gactttttagcatatgtttgaccattcgtcttattcaaaaaatttaagtaattattaatt 114
Query: 113 nnnnncatatcatttgattcactgttaaatatattttcatgta--catatagttttacat 170
| |||||||||||||| ||||||||||||||| ||||| |||||| ||||||||
Sbjct: 113 attttcctatcatttgattcattgttaaatatatttt-atgtagacatataattttacat 55
Query: 171 attttacaaatattttt-gaataagacgaacggttaaacatgtgctaaaaagtc 223
|||||| ||| ||||| |||||||||||||||| ||| |||||||||||||||
Sbjct: 54 attttataaaagttttttgaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 133 tttttgaataagacgaatggtcaaacatatgctaaaaagtc 173
>RF01062;MIR812;ABRL01002071.1/2583-2756 65489:Oryza barthii
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 95/104 (91%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| |
Sbjct: 106 tatcatttgattcactgttaaatatattttcatgtaggcatataattttatatatttcat 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaag 221
||| |||||||||||||||| |||||||||||| ||||||||||
Sbjct: 46 aaaaatttttgaataagacgtacggttaaacatatgctaaaaag 3
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 134 tttttaaataagacgaacggtcaaacatgtgctaaaaagtc 174
>RF01062;MIR812;AP005756.3/134331-134500 39947:Oryza sativa Japonica
Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 133/158 (84%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 157 tgtttgaccattcgtcttattaaaaaaatttaagtaattatttattcttttcatatcatt 98
Query: 127 tgattcactgttaaatatattttcatgta--catatagttttacatattttacaaatatt 184
||||||| |||||||||| ||||||||| ||||||||||||||||||| |||| | ||
Sbjct: 97 tgattcatcgttaaatatactttcatgtatacatatagttttacatatttaacaattttt 38
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagt 222
||| ||||||||||||||| |||||| |||||||||||
Sbjct: 37 ttt-aataagacgaacggtcaaacatatgctaaaaagt 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 actttttagtatatgtttgaccattcgtcttatt 87
||||||||| |||||||||||| |||||||||||
Sbjct: 1 actttttagcatatgtttgaccgttcgtcttatt 34
>RF01062;MIR812;AP008213.1/2222065-2221894 39947:Oryza sativa
Japonica Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 95/105 (90%)
Strand = Plus / Minus
Query: 118 catatcatttgattcactgttaaatatattttcatgtacatatagttttacatattttac 177
|||||||||||||||| ||||||||||| || |||| |||||||||||||||||| ||
Sbjct: 106 catatcatttgattcattgttaaatatacttatatgtgtatatagttttacatatttcac 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagt 222
||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 46 aaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagt 2
>RF01058;MIR806;AACV01004667.1/24086-23843 39947:Oryza sativa
Japonica Group
Length = 244
Score = 129 bits (65), Expect = 2e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 157 atatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgcta 216
|||||||||||| ||||||| |||| ||||||||||||||||| ||| | |||| |||||
Sbjct: 144 atatagttttacgtattttataaatttttttgaataagacgaaaggtcacacatttgcta 203
Query: 217 aaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 204 aaaagtcaacggtgtcaaatatttagaaacggaggaagtat 244
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||| ||||| ||| |||| |||||||| ||||||||||||| | |||| ||||| ||
Sbjct: 244 atacttcctccgtttctaaatatttgacaccgttgactttttagcaaatgtgtgaccttt 185
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 184 cgtcttatt 176
>RF01058;MIR806;AAAA02029195.1/6039-6277 39946:Oryza sativa Indica
Group
Length = 239
Score = 129 bits (65), Expect = 2e-29
Identities = 124/140 (88%), Gaps = 4/140 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
||||| |||||||| ||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 102 tatcaattgattcattgttaaatatactta-atgcatacatatagttttacatattttac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||||||||| | ||||||||| ||||||||||||||||||||| |
Sbjct: 161 aaaagttttt-aataagacgaacgataaaacatgtgataaaaagtcaacggtgtcaaata 219
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 220 tttagaaacggagggagtat 239
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||| |||||||| |||||||||||| | |||||| | | ||
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttatcacatgttttatcgtt 180
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AP008207.1/14264941-14265182 39947:Oryza sativa
Japonica Group
Length = 242
Score = 129 bits (65), Expect = 2e-29
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 139 tacatatagttttatatattttacaaaattttttgaataagacgaacggttaaacacgtg 198
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggag 250
||||||||| |||||||||||| |||| |||| ||||
Sbjct: 199 ctaaaaagttaacggtgtcaaatatttagaaatggag 235
>RF01058;MIR806;AAAA02026173.1/5859-5619 39946:Oryza sativa Indica
Group
Length = 241
Score = 129 bits (65), Expect = 2e-29
Identities = 122/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaggcatataattttatatattttac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| | ||| ||||||||||| ||| ||| |||| ||||||| ||||| ||||||||||
Sbjct: 162 aaaaaaatttaaataagacgaatggtcaaatatgtactaaaaaatcaacagtgtcaaaca 221
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 222 tttcgaaacggagggagtat 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| ||||||||||||| ||||| ||||||||| || ||||||||||
Sbjct: 241 atactccctccgtttcgaaatgtttgacactgttgattttttagtacatatttgaccatt 182
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 181 cgtcttatt 173
>RF01058;MIR806;AP003509.3/79102-78866 39947:Oryza sativa Japonica
Group
Length = 237
Score = 129 bits (65), Expect = 2e-29
Identities = 116/132 (87%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct: 98 tatcgtttgattcattgttaaatatacgttcatgtatacatatagttttacatatttcac 157
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||||| | |||||| ||| |||||||||| | |||||||||
Sbjct: 158 aaaattttttgaataagacgaacgatcaaacatatgcgaaaaagtcaatgatgtcaaaca 217
Query: 238 ttttgaaacgga 249
||| ||||||||
Sbjct: 218 tttagaaacgga 229
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||| |||||||||||| |||||||||| | |||||||||| | ||
Sbjct: 237 atactccttccgtttctaaatgtttgacatcattgactttttcgcatatgtttgatcgtt 178
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 177 cgtcttatt 169
>RF01058;MIR806;AAAA02030779.1/19291-19098 39946:Oryza sativa Indica
Group
Length = 194
Score = 129 bits (65), Expect = 2e-29
Identities = 104/116 (89%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||| ||||| ||||||||||| || ||||| |||||||||||| |||||| ||
Sbjct: 79 tatcatttaattcattgttaaatatacttatatgtatacatatagttttatatatttcac 138
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtca 233
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 139 aaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 194
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 43 tgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||| ||||||||||||| | |||||||||| |||||||||||
Sbjct: 194 tgacaccgttgactttttagcacatgtttgaccgttcgtcttatt 150
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacat 210
||||||||||||||||||||||||||||
Sbjct: 52 tttttgaataagacgaacggttaaacat 25
>RF01058;MIR806;AAAA02018287.1/668-427 39946:Oryza sativa Indica
Group
Length = 242
Score = 129 bits (65), Expect = 2e-29
Identities = 155/186 (83%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||| ||||||||||| || ||||| |||||| ||| |||||||||||||
Sbjct: 2 tactccctccgtttcaaaatgtttga-accgttgattttttaatatgtgtttgaccattc 60
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| ||||||||||||||| |||||||||||||||| |||||
Sbjct: 61 gtcttattaaaaaaaattaagtaattatttattattttcatatcatttgattcattgtta 120
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
|||||| |||||||| |||||||||||||||||||| | ||| ||||| |||||||||
Sbjct: 121 aatatactttcatgtacacatatagttttacatatttca-taattttttttaataagacg 179
Query: 198 aacggt 203
||||||
Sbjct: 180 aacggt 185
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||| ||||| | |||||| |||||||| ||||||||||||
Sbjct: 74 ttttttaataagacgaatggtcaaacacatattaaaaaatcaacggt-tcaaacattttg 16
Query: 243 aaacggaggaagta 256
||||||||| ||||
Sbjct: 15 aaacggagggagta 2
>RF01058;MIR806;DQ280666.1/5879-6118 39947:Oryza sativa Japonica
Group
Length = 240
Score = 129 bits (65), Expect = 2e-29
Identities = 122/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| || ||||| ||||||||||||||||||| |
Sbjct: 101 tatcatttgattcattgttaaatatacttatatgtatacatatagttttacatatttcat 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||| |||||||||||| |||||||||||||||||| ||||||||| || |
Sbjct: 161 aaaattttttgaacaagacgaacggtcaaacatgtgctaaaaagttaacggtgtcgaata 220
Query: 238 ttttgaaacggaggaagtat 257
|| |||||||||| |||||
Sbjct: 221 ttcagaaacggagggagtat 240
>RF01058;MIR806;AAAA02022891.1/7277-7039 39946:Oryza sativa Indica
Group
Length = 239
Score = 129 bits (65), Expect = 2e-29
Identities = 123/140 (87%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 101 tatcatttgatttattgttaaatatactttcatgtatacatatagttttacatattttac 160
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||| |||||||||||| || |||||||||||||||| ||| |||| ||| |
Sbjct: 161 aaattttttt-aataagacgaacagtcaaacatgtgctaaaaaaccaatagtgttaaata 219
Query: 238 ttttgaaacggaggaagtat 257
||| |||||||||| |||||
Sbjct: 220 tttagaaacggagggagtat 239
>RF01062;MIR812;AACV01018980.1/6565-6395 39947:Oryza sativa Japonica
Group
Length = 171
Score = 127 bits (64), Expect = 9e-29
Identities = 94/104 (90%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatatagttttacatattttacaa 179
|||||||||||||| ||||||||||||||| || ||||||| |||||||||||||| ||
Sbjct: 104 tatcatttgattcattgttaaatatatttttatagacatataattttacatattttataa 45
Query: 180 atatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
| ||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 44 aagtttttgaataagacgaacggtcaaatatgtgctaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaa 220
|||||||||||||| |||||| |||||||||| |||||
Sbjct: 131 tttttgaataagacaaacggtcaaacatgtgccaaaaa 168
>RF01058;MIR806;AAAA02025783.1/3210-3453 39946:Oryza sativa Indica
Group
Length = 244
Score = 127 bits (64), Expect = 9e-29
Identities = 183/224 (81%), Gaps = 5/224 (2%)
Strand = Plus / Plus
Query: 23 tccctccattttaaaatgtttgacacggttgacttttt--agtatatgtttgaccattcg 80
||||||| ||||||||| |||||||| ||| ||||||| |||| ||||||||||||
Sbjct: 5 tccctccgttttaaaatatttgacaccgttaacttttttaagtacgtgtttgaccattta 64
Query: 81 tcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgttaa 140
||||||| |||||||||||||||| |||||||||||||||| ||||||
Sbjct: 65 tcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaa 124
Query: 141 atatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacga 198
|||||||||||||| |||||| |||||| |||||| ||||| ||||| ||||| || |
Sbjct: 125 atatattttcatgtacacatatggttttatatatttcacaaaattttttaaataaaacaa 184
Query: 199 acggttaaacatgtgc-taaaaagtcaacggtgtcaaacatttt 241
||||| |||||||||| || | | ||||||||||| ||||||||
Sbjct: 185 acggtcaaacatgtgcttagataatcaacggtgtcgaacatttt 228
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 216 aaaaagtcaacggtgtcaaacattttgaaacggagg 251
||||||| |||||||||||| ||||| |||||||||
Sbjct: 42 aaaaagttaacggtgtcaaatattttaaaacggagg 7
>RF01058;MIR806;D21160.1/1144-1391 4530:Oryza sativa (rice)
Length = 248
Score = 127 bits (64), Expect = 9e-29
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||
Sbjct: 145 tacatatagttttacatatttcacaaaagtttttgaatatgacgaaaggttaaacatgtg 204
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||||||||| ||| ||||| |||| |||||||||| |||||
Sbjct: 205 ctaaaaagtcaatggtatcaaatatttagaaacggagggagtat 248
>RF01058;MIR806;AAAA02017468.1/3478-3717 39946:Oryza sativa Indica
Group
Length = 240
Score = 127 bits (64), Expect = 9e-29
Identities = 115/131 (87%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 121 atcatttgattcactgttaaatatattttcatgta--catatagttttacatattttaca 178
||||||||||||| ||||||||||| || ||||| ||||||||| ||||||||| |||
Sbjct: 102 atcatttgattcattgttaaatatacttatatgtatacatatagttctacatatttcaca 161
Query: 179 aatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|| | ||||||||||||||||||| |||||||||||||||||||||||| ||| || ||
Sbjct: 162 aaagtatttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggcgtcgaatat 221
Query: 239 tttgaaacgga 249
|| ||||||||
Sbjct: 222 ttagaaacgga 232
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 50 gttgactttttagtatatgtttgaccattcgtcttatt 87
||||||||||||| | |||||||||| |||||||||||
Sbjct: 209 gttgactttttagcacatgtttgaccgttcgtcttatt 172
>RF01058;MIR806;AACV01021555.1/8657-8895 39947:Oryza sativa Japonica
Group
Length = 239
Score = 127 bits (64), Expect = 9e-29
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 154 tacatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||
Sbjct: 136 tacatatagttttacatattttacaaaggtttttgaataagacaaacggttaaagatgtg 195
Query: 214 ctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
||||||| |||||||||||||| |||| ||||| ||| |||||
Sbjct: 196 ctaaaaaatcaacggtgtcaaatatttaaaaacgaagggagtat 239
Score = 48.1 bits (24), Expect = 7e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 182 atttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatttt 241
|||||||||||||| ||||||| ||| || | ||||| |||||| || ||||||||
Sbjct: 76 atttttgaataagatgaacggtcaaatatatttaaaaaaatcaacgacgtaaaacattta 17
Query: 242 gaaacggaggaagtat 257
|||||||||| |||||
Sbjct: 16 gaaacggagggagtat 1
>RF01058;MIR806;AC135644.2/3714-3474 39947:Oryza sativa Japonica
Group
Length = 241
Score = 127 bits (64), Expect = 9e-29
Identities = 109/123 (88%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||| ||||||||| | ||||||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 102 tatcgtttgattcattcttaaatatatttttatgtatacatatagttttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||| ||| ||||||||| |||||||||||||| |||||| |
Sbjct: 162 aaaagtttttgaataagacgaatggtcaaacatgtgttaaaaagtcaacggcgtcaaata 221
Query: 238 ttt 240
|||
Sbjct: 222 ttt 224
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| |||||| | |||||||||||| | ||||||||||||||||||||||
Sbjct: 224 aaatatttgacgccgttgactttttaacacatgtttgaccattcgtcttatt 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||||||||||||||| ||||||| |||| ||||||||||| | |||||| ||||
Sbjct: 75 tttttgaataagacgaatggttaaatatgtttaaaaaagtcaacagcgtcaaatattt 18
>RF01058;MIR806;AC087552.3/52194-51954 39947:Oryza sativa Japonica
Group
Length = 241
Score = 127 bits (64), Expect = 9e-29
Identities = 196/241 (81%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||| | ||| ||||| |||||||| ||| |||||| ||||| |||||||| |||
Sbjct: 1 atactccctacgtttcaaaatatttgacaccgttaacttttcagtatgtgtttgacaatt 60
Query: 79 cgtcttattnnnnnnn-tttaagtaattatttannnnnnncatatcatttgattcactgt 137
|||||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 61 tgtcttattcaaaaaaatttaagtaattatttattctttttatatcatttgattcgttgt 120
Query: 138 taaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataaga 195
|||||||| ||| ||||||| |||||||||| |||||| |||| | ||||| |||||||
Sbjct: 121 taaatatacttttatgtacacatatagttttatatatttcacaatttttttt-aataaga 179
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagt 255
||||| || ||||||| ||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 180 cgaacagtctaacatgtactaaaaagtcaacggtgtcaagtattttaaaacggagggagt 239
Query: 256 a 256
|
Sbjct: 240 a 240
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| ||||||| ||||||||||||||| ||||| ||| |||
Sbjct: 240 tactccctccgttttaaaatacttgacaccgttgactttttagtacatgttagactgttc 181
Query: 80 gtcttatt 87
||||||||
Sbjct: 180 gtcttatt 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| |||||||||||||| || || ||||| | || |||||| |||||||||||| |
Sbjct: 80 aaatttttttgaataagacaaattgtcaaacacatactgaaaagttaacggtgtcaaata 21
Query: 238 ttttgaaacggaggaagtat 257
|||||||||| ||| |||||
Sbjct: 20 ttttgaaacgtagggagtat 1
>RF01058;MIR806;AP005647.3/116663-116903 39947:Oryza sativa Japonica
Group
Length = 241
Score = 127 bits (64), Expect = 9e-29
Identities = 109/123 (88%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||| ||
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtatacatatagttttatatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| |||||||||||||| |||||| |||||||| ||||||||||||| |||||| |
Sbjct: 162 aaatttttttgaataagacaaacggtgaaacatgttttaaaaagtcaacgacgtcaaata 221
Query: 238 ttt 240
|||
Sbjct: 222 ttt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||||||| ||||||| || ||||||||||||||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgcttaaagaagtcaacggtgtcaaatatttag 16
Query: 243 aaacggaggaagtat 257
||||||| |||||
Sbjct: 15 ggacggagggagtat 1
>RF01058;MIR806;AP008209.1/34522251-34522486 39947:Oryza sativa
Japonica Group
Length = 236
Score = 127 bits (64), Expect = 9e-29
Identities = 187/228 (82%), Gaps = 6/228 (2%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| ||| |||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 1 atactccctccgtttcaaaatgtttgacaccgttgactttatagtacgtgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
||||||| |||||||||||||||| ||||||||||||| | ||||
Sbjct: 61 tatcttattcaaaaaatttaagtaattatttattttttt-atatcatttgatttattgtt 119
Query: 139 aaatatattttcatgtaca--tatagttttacatattttacaaatatttttgaataagac 196
||||||| || |||||||| |||| |||||| ||||| | || | |||| ||||||||
Sbjct: 120 aaatatactt-catgtacacatataattttacgtatttcataattttttt--aataagac 176
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaa 244
|||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct: 177 aaacggtcaaacatatgttaaaaagtcaacggtgtcaaacattttgaa 224
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||| || ||| ||||| || ||| |||||||||||||||||||||||||
Sbjct: 75 tttttgaataagataaatggtcaaacacgtactataaagtcaacggtgtcaaacattttg 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||| |||||||||||| |||||||||||| || ||||||||
Sbjct: 221 aaaatgtttgacaccgttgactttttaacatatgtttgaccgtttgtcttatt 169
>RF01058;MIR806;AACV01002983.1/10960-10719 39947:Oryza sativa
Japonica Group
Length = 242
Score = 127 bits (64), Expect = 9e-29
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
||||| |||||||||| ||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 100 catattatttgattcattgttaaatatactttcatgtatacatatagttttatatatttc 159
Query: 176 acaaatatttttgaa-taagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaa 234
||| || ||||| || ||| ||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 160 acatattttttttaaataaaacgaacggtcaaacatgtgctaaaaagtcaacgatgttaa 219
Query: 235 acattttgaaacggaggaagtat 257
|||||| ||||||||| |||||
Sbjct: 220 acatttaaaaacggagggagtat 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||| |||||||| ||| ||||||||||||| | |||||||||| ||
Sbjct: 242 atactccctccgtttttaaatgtttaacatcgttgactttttagcacatgtttgaccgtt 183
Query: 79 cgtcttatt 87
||| |||||
Sbjct: 182 cgttttatt 174
>RF01058;MIR806;AACV01024998.1/37983-37736 39947:Oryza sativa
Japonica Group
Length = 248
Score = 127 bits (64), Expect = 9e-29
Identities = 121/139 (87%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| || |||||| ||||||||||||||||||| ||
Sbjct: 109 tatcatttgattcattgttaaatatacttacatgtatacatatagttttacatatttcac 168
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||||| | |||||||||||||||| ||||| ||| ||| |
Sbjct: 169 aaaagtttttgaataagacgaacgatcaaacatgtgctaaaaaaccaacgatgttaaata 228
Query: 238 ttttgaaacggaggaagta 256
||| |||| ||||| ||||
Sbjct: 229 tttagaaatggagggagta 247
>RF01058;MIR806;AACV01007621.1/52559-52322 39947:Oryza sativa
Japonica Group
Length = 238
Score = 127 bits (64), Expect = 9e-29
Identities = 195/240 (81%), Gaps = 5/240 (2%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||| ||| ||| ||||| ||||||| ||| |||||||| || ||||||| |||||
Sbjct: 2 tactccatccgtttcaaaatatttgacatcgttaactttttaatacgtgtttgatcattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
|||||||| || ||||||||||||| |||| ||||||||| |||||
Sbjct: 62 gtcttattaaaaaaatt-aagtaattatttattctttttatattatttgattcgttgtta 120
Query: 140 aatatattttcatgt--acatatagttttacatattttacaaatatttttgaataagacg 197
||||||||||||||| |||||||||||||||||||||| || | |||| ||||||| |
Sbjct: 121 aatatattttcatgtgcacatatagttttacatattttataattttttt--aataagatg 178
Query: 198 aacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagtat 257
|||||| ||| ||||||||||||||||||| ||| ||| | ||||||||||||| |||||
Sbjct: 179 aacggtcaaatatgtgctaaaaagtcaacgatgttaaataatttgaaacggagggagtat 238
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| | | ||||| || |||||||| |||| ||||||| ||||||
Sbjct: 75 ttttttaataagacgaatgatcaaacacgtattaaaaagttaacgatgtcaaatattttg 16
Query: 243 aaacgga 249
|||||||
Sbjct: 15 aaacgga 9
>RF01058;MIR806;AC105928.2/57418-57177 39947:Oryza sativa Japonica
Group
Length = 242
Score = 127 bits (64), Expect = 9e-29
Identities = 195/241 (80%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 20 tactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccattc 79
|||||||||| ||||||||| || |||| ||| | |||||| || |||||||||||||
Sbjct: 2 tactccctccgttttaaaatattgcacaccgttaattttttaatacgtgtttgaccattc 61
Query: 80 gtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtta 139
||||||| |||||| ||||||||| |||||||||| ||||| |||||
Sbjct: 62 atcttatttaaaaaatttaagcaattatttattcttttcatatcatttaattcattgtta 121
Query: 140 aatatattttcatgtaca--tatagttttacatattttacaaatatttttga-ataagac 196
|||||| ||||||||||| ||||||||||||||||| | || | ||||| | |||||||
Sbjct: 122 aatatactttcatgtacacatatagttttacatatttcataattttttttaatataagac 181
Query: 197 gaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggaggaagta 256
|||| || |||||| | |||||||||||| |||||||| |||||||||| |||| ||||
Sbjct: 182 gaacagtcaaacatatattaaaaagtcaacagtgtcaaatattttgaaacagagggagta 241
Query: 257 t 257
|
Sbjct: 242 t 242
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
|||||||||| ||| ||||| |||||||| |||||||||||| |||||||||||| ||
Sbjct: 242 atactccctctgtttcaaaatatttgacactgttgactttttaatatatgtttgactgtt 183
Query: 79 cgtcttat 86
||||||||
Sbjct: 182 cgtcttat 175
>RF01062;MIR812;AAAA02008967.1/4575-4404 39946:Oryza sativa Indica
Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 96/106 (90%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatatttt--catgtacatatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||||| ||
Sbjct: 106 tatcatttgattcattgttaaatatacttttacatatacatatagttttagatatttcac 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 46 aaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | |||||||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttatt 35
>RF01062;MIR812;AC128644.4/73210-73382 39947:Oryza sativa Japonica
Group
Length = 173
Score = 125 bits (63), Expect = 4e-28
Identities = 96/106 (90%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
|||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 106 tatcatttgatttattgttaaatatatttttatgcatacatatagttttacatattttat 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||| ||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 46 aaaagtttttgaataaaacgaacggtcaaacatgtgctaaaaagtc 1
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 133 tttttaaataagacgaacggttaaacatgtgctaaaaagtc 173
>RF01062;MIR812;AP008207.1/12546112-12545941 39947:Oryza sativa
Japonica Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
||||||||||||||||||||| |||| ||||||||||| |||||||||
Sbjct: 159 tgtttgaccattcgtcttattaaaaaaatttaggtaattatttattcttttcatatcatt 100
Query: 127 tgattcactgttaaatatattttcatgt--acatatagttttacatattttacaaatatt 184
||||||| ||||||||| | ||| |||| |||||||||||||||||||| |||||| ||
Sbjct: 99 tgattcattgttaaatacacttttatgtacacatatagttttacatatttcacaaatttt 40
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaa 220
||| ||||||||||||||| ||||||| ||||||||
Sbjct: 39 ttttaataagacgaacggtcaaacatgcgctaaaaa 4
>RF01062;MIR812;AAAA02015240.1/4576-4749 39946:Oryza sativa Indica
Group
Length = 174
Score = 125 bits (63), Expect = 4e-28
Identities = 96/106 (90%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 106 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcac 47
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
||| ||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 46 aaaagtttttaaataagacgaacggtcaaacatgtgctaaaaagtc 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 gactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | |||||||||| |||||||||||
Sbjct: 1 gactttttagcacatgtttgaccgttcgtcttatt 35
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaa 220
|||| ||||| ||||||||||||||| |||||| |||| ||||
Sbjct: 128 aaatttttttaaataagacgaacggtcaaacatatgcttaaaa 170
>RF01062;MIR812;CR855113.1/22090-22258 4530:Oryza sativa (rice)
Length = 169
Score = 125 bits (63), Expect = 4e-28
Identities = 143/169 (84%), Gaps = 5/169 (2%)
Strand = Plus / Minus
Query: 57 ttttagtatatgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnn 116
|||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 166 ttttagtacgtgtttgaccattcgtcttattcaaaaa-tttaagtaattatttattcttt 108
Query: 117 ncatatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattt 174
|||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct: 107 tcatatcatttgattcattgttaaatatactt-catgtacacatatagttttacatattt 49
Query: 175 tacaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtc 223
|||||| ||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 48 cacaaattttttt-aataagatgaacggtcaaacatgtgctaaaaagtc 1
>RF01058;MIR806;AAAA02018392.1/9429-9624 39946:Oryza sativa Indica
Group
Length = 196
Score = 125 bits (63), Expect = 4e-28
Identities = 139/167 (83%), Gaps = 4/167 (2%)
Strand = Plus / Plus
Query: 67 tgtttgaccattcgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatt 126
|||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 27 tgtttgaccattcgtcttgtttaaaaaatttaagtaattatttattcttttcatatcatt 86
Query: 127 tgattcactgttaaatatattttcatgtaca--tatagttttacatattttacaaatatt 184
||||||| ||||||||||| |||||| |||| ||||||||||||||||| | |||| ||
Sbjct: 87 tgattcattgttaaatatactttcatatacacatatagttttacatatttcataaatttt 146
Query: 185 tttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgt 231
|| ||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 147 tt--aataagacgaaaggtcaaatatgtgctaaaaagtcaacggtgt 191
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 45 acacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||| ||||||||||||| | || ||||||| |||||||||||
Sbjct: 191 acaccgttgactttttagcacatatttgacctttcgtcttatt 149
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 125 bits (63), Expect = 4e-28
Identities = 108/122 (88%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| ||
Sbjct: 92 tatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcac 151
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||
Sbjct: 152 aaaattttttgaataagacgaatggtcaaacatgtttgaaaaagtcaacggcgtcaaaca 211
Query: 238 tt 239
||
Sbjct: 212 tt 213
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 65 tttttaaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattt 8
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 37 aatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||| | ||||||||||| | ||||||||||||||||||||||
Sbjct: 213 aatgtttgacgccgttgactttttcaaacatgtttgaccattcgtcttatt 163
>RF01058;MIR806;AL731600.3/67344-67602 39947:Oryza sativa Japonica
Group
Length = 259
Score = 125 bits (63), Expect = 4e-28
Identities = 117/133 (87%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 119 atatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatatttta 176
||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 121 atatcatttgattcattgttaaatatacttttatgtacacatatagttttacatatttta 180
Query: 177 caaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaac 236
|| | |||| ||||||| ||||||| ||||||| |||||||||||||| |||||| |
Sbjct: 181 taattttttt--aataagatgaacggtcaaacatgcactaaaaagtcaacgatgtcaagc 238
Query: 237 attttgaaacgga 249
|||||||||||||
Sbjct: 239 attttgaaacgga 251
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||| ||| ||| |||||| |||||| |||||||||||||| |||||||||| ||
Sbjct: 259 atactccatccgtttcaaaatgcttgacatcgttgactttttagtgcatgtttgaccgtt 200
Query: 79 cgtcttatt 87
| |||||||
Sbjct: 199 catcttatt 191
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacat 238
|||||||||||||| || ||| ||| | || ||||| ||||| |||||||||||||
Sbjct: 94 tttttgaataagacaaatggtcaaatacgtactaaatagtcatcggtgtcaaacat 39
>RF01058;MIR806;FJ032627.1/93112-93341 4538:Oryza glaberrima
(African rice)
Length = 230
Score = 125 bits (63), Expect = 4e-28
Identities = 176/216 (81%), Gaps = 3/216 (1%)
Strand = Plus / Plus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||| |||| |||||| | |||||| ||||| |||||||||||||||
Sbjct: 1 atactccctccgtttttaaatatttgacgccgttgaccttttaaaatatgtttgaccatt 60
Query: 79 cgtcttattnnnnnnntttaagtaattatttannnnnnncatatcatttgattcactgtt 138
|| ||||| |||||||||||||| | | |||||||||||||| ||||
Sbjct: 61 tgttttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgtt 120
Query: 139 aaatatattttcatgt--acatatagttttacatattttacaaata-tttttgaataaga 195
||||||| || |||| | |||||||||||||||||| ||||| | ||||| |||||||
Sbjct: 121 aaatatacttatatgtgtatatatagttttacatatttcacaaaaagtttttaaataaga 180
Query: 196 cgaacggttaaacatgtgctaaaaagtcaacggtgt 231
|||| |||||||| ||||||||||||| ||||||||
Sbjct: 181 cgaatggttaaacctgtgctaaaaagttaacggtgt 216
Score = 46.1 bits (23), Expect = 3e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||| || || ||| |||||| | ||||| |||||||| |||||| ||||
Sbjct: 75 tttttgaataaaacaaatggtcaaacatattttaaaaggtcaacggcgtcaaatatttaa 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
>RF01058;MIR806;AP008212.1/224770-225009 39947:Oryza sativa Japonica
Group
Length = 240
Score = 125 bits (63), Expect = 4e-28
Identities = 115/130 (88%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||| |
Sbjct: 102 tatcatttgattcattgttaaatatatttttatgtaggcatataattttacatatttcat 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| ||||| ||||||||||||||| ||| ||||||||||||||||| ||||| |||||
Sbjct: 162 aaaagttttt-aataagacgaacggtcaaatatgtgctaaaaagtcaatggtgttaaaca 220
Query: 238 ttttgaaacg 247
||| ||||||
Sbjct: 221 tttcgaaacg 230
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagt 222
||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 75 tttttaaataagacaaacggttaaatatgtgctaaaaagt 36
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||| |||| |||||||||||| | || ||||||| |||||||||||
Sbjct: 223 aaatgtttaacaccattgactttttagcacatatttgaccgttcgtcttatt 172
>RF01058;MIR806;AC138454.2/100226-100465 39947:Oryza sativa Japonica
Group
Length = 240
Score = 125 bits (63), Expect = 4e-28
Identities = 118/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtaca--tatagttttacatattttac 177
|||||||||||| | |||||||||||||| ||||| | ||||||||||||||||| ||
Sbjct: 102 tatcatttgattaattgttaaatatatttatatgtatacctatagttttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
|||| ||||| |||||||| |||| ||||||||||||||||||||||| ||||| ||| |
Sbjct: 162 aaattttttt-aataagacaaacgattaaacatgtgctaaaaagtcaatggtgttaaata 220
Query: 238 ttttgaaacggagg 251
||| ||||||||||
Sbjct: 221 tttagaaacggagg 234
>RF01058;MIR806;AACV01019786.1/21190-20951 39947:Oryza sativa
Japonica Group
Length = 240
Score = 125 bits (63), Expect = 4e-28
Identities = 124/141 (87%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgtacatata--gttttacatattttac 177
|||||||||||||| | | ||||||| |||||| |||| ||| ||||||||||||| |
Sbjct: 102 tatcatttgattcattataaaatatactttcatatacacataaagttttacatattt--c 159
Query: 178 aaatatttttgaataagacgaacggttaaacat-gtgctaaaaagtcaacggtgtcaaac 236
||| ||||| |||||||||||||||||||||| || ||||||||| |||||||||||||
Sbjct: 160 aaaatttttttaataagacgaacggttaaacattgtactaaaaagttaacggtgtcaaac 219
Query: 237 attttgaaacggaggaagtat 257
||||||||||||||| |||||
Sbjct: 220 attttgaaacggagggagtat 240
Score = 67.9 bits (34), Expect = 7e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagta-tatgtttgaccat 77
||||||||||| ||| |||||||||||||| ||| ||||||||||| |||||| ||| |
Sbjct: 240 atactccctccgtttcaaaatgtttgacaccgttaactttttagtacaatgtttaaccgt 181
Query: 78 tcgtcttatt 87
||||||||||
Sbjct: 180 tcgtcttatt 171
Score = 46.1 bits (23), Expect = 3e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| |||||||| |||| | ||| |||| ||||||||||||| |||||| ||||
Sbjct: 75 tttttaaataagacaaacgatcaaatatgtttaaaaaagtcaacggcgtcaaatatttaa 16
Query: 243 aaacggaggaagtat 257
||||||||| |||||
Sbjct: 15 aaacggagggagtat 1
>RF01062;MIR812;AL772421.5/52087-52262 4530:Oryza sativa (rice)
Length = 176
Score = 123 bits (62), Expect = 1e-27
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 120 tatcatttgattcactgttaaatatattttcatg--tacatatagttttacatattttac 177
||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||||||| ||
Sbjct: 109 tatcatttgattcgttgttaaatatacttttatgcatacgtatagttttacatatttcac 50
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaac 226
||| |||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 49 aaaaatttttgaataagacgaacggtcaaacatgtgataaaaagtcaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaa 217
|||||||||||||||| |||| |||||||||||||
Sbjct: 136 tttttgaataagacgagcggtcaaacatgtgctaa 170
>RF01058;MIR806;AACV01000133.1/7578-7356 39947:Oryza sativa Japonica
Group
Length = 223
Score = 123 bits (62), Expect = 1e-27
Identities = 123/140 (87%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||||| ||||||||||||||| ||||| |||||| |||||||||| |||
Sbjct: 87 tatcatttgattcattgttaaatatatttttatgtatgcatataattttacatatcttat 146
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||| |
Sbjct: 147 aaaagtttt--aataagacgaacggtcaaacatatgctaaaaagtcaacggtgtcaaa-a 203
Query: 238 ttttgaaacggaggaagtat 257
||| ||||||||| |||||
Sbjct: 204 tttcaaaacggagggagtat 223
Score = 81.8 bits (41), Expect = 5e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 19 atactccctccattttaaaatgtttgacacggttgactttttagtatatgtttgaccatt 78
||||||||||| |||| |||| |||||||| ||||||||||||| |||||||||||| ||
Sbjct: 223 atactccctccgttttgaaat-tttgacaccgttgactttttagcatatgtttgaccgtt 165
Query: 79 cgtcttatt 87
|||||||||
Sbjct: 164 cgtcttatt 156
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggt 229
|||| ||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 59 ttttggaataggacgaacggtcaaacatgtaataaaaagtcaacggt 13
>RF01058;MIR806;AACV01022814.1/42354-42597 39947:Oryza sativa
Japonica Group
Length = 244
Score = 123 bits (62), Expect = 1e-27
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 158 tatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgctaa 217
||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 145 tatagttttacatatttcataaaagtttttgaataagacgaacggttaaacatgtgctaa 204
Query: 218 aaagtcaacggtgtcaaa 235
||||||||||||||||||
Sbjct: 205 aaagtcaacggtgtcaaa 222
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 41 tttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||| ||||||||||||| | |||||| ||| |||||||||||
Sbjct: 222 tttgacaccgttgactttttagcacatgtttaaccgttcgtcttatt 176
>RF01058;MIR806;AC130607.2/29520-29261 39947:Oryza sativa Japonica
Group
Length = 260
Score = 123 bits (62), Expect = 1e-27
Identities = 87/94 (92%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 155 acatatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtgc 214
|||||||||||||||||||| |||| | |||||||||||||||||| || ||||||||||
Sbjct: 168 acatatagttttacatatttcacaatt-tttttgaataagacgaacagtcaaacatgtgc 226
Query: 215 taaaaagtcaacggtgtcaaacattttgaaacgg 248
|||||| |||||||||||||||||||| ||||||
Sbjct: 227 taaaaaatcaacggtgtcaaacatttttaaacgg 260
Score = 105 bits (53), Expect = 3e-22
Identities = 117/142 (82%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnn 94
|||||||||||| | |||||||||||| || ||||| |||||||||||||||
Sbjct: 8 aaaatgtttgacgcctttgactttttagcatgtgtttaaccattcgtcttatttaaaaag 67
Query: 95 tttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgt 154
|||||||||||||| | |||||||||||||||| ||||||||||| ||||||||
Sbjct: 68 tttaagtaattattaattcttttcatatcatttgattcattgttaaatatactttcatgt 127
Query: 155 --acatatagttttacatattt 174
||||||||||||||||||||
Sbjct: 128 acacatatagttttacatattt 149
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||| ||||||||||| ||||||||| |||||||||||||| || |||||||||||||
Sbjct: 66 tttttaaataagacgaatggttaaacacatgctaaaaagtcaaaggcgtcaaacattttg 7
Query: 243 aaacgg 248
||||||
Sbjct: 6 aaacgg 1
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 aaaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||||||||| ||||| ||||||| | ||||||||| |||||||||||
Sbjct: 253 aaaatgtttgacaccgttgattttttagcacatgtttgactgttcgtcttatt 201
>RF01058;MIR806;ABRL01000517.1/8497-8737 65489:Oryza barthii
Length = 241
Score = 123 bits (62), Expect = 1e-27
Identities = 116/133 (87%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 118 catatcatttgattcactgttaaatatattttcatgta--catatagttttacatatttt 175
|||||||||||||||| | ||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 100 catatcatttgattcattattaaatatatttttatgtaggcatataattttacatatttc 159
Query: 176 acaaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaa 235
| ||| |||||||||||||||||||| |||||||||||||||| ||||| | || |||
Sbjct: 160 ataaaaggttttgaataagacgaacggtcaaacatgtgctaaaaaatcaacagcgttaaa 219
Query: 236 cattttgaaacgg 248
||||| |||||||
Sbjct: 220 catttcgaaacgg 232
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||| |
Sbjct: 75 tttttgaataagacgaacggtcaaacatgtgctaaaaagttaacgacgccaaacatttcg 16
Query: 243 aaacggagg 251
|||||||||
Sbjct: 15 aaacggagg 7
Score = 48.1 bits (24), Expect = 7e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttatt 87
|||||||| || | ||||| ||||||| | |||||||||| |||||||||||
Sbjct: 224 aaatgtttaacgctgttgattttttagcacatgtttgaccgttcgtcttatt 173
>RF01058;MIR806;AP004140.3/16042-16282 39947:Oryza sativa Japonica
Group
Length = 241
Score = 123 bits (62), Expect = 1e-27
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 120 tatcatttgattcactgttaaatatattttcatgta--catatagttttacatattttac 177
|||||||||||| | ||||||||||| || ||||| ||||||||||||||||||| ||
Sbjct: 102 tatcatttgatttattgttaaatatacttatatgtatacatatagttttacatatttcac 161
Query: 178 aaatatttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 237
||| |||||||| ||||| |||||| ||| ||||||||||||||||||||||||||| |
Sbjct: 162 aaaagtttttgaaaaagacaaacggtcaaatatgtgctaaaaagtcaacggtgtcaaata 221
Query: 238 ttttgaaac 246
||| |||||
Sbjct: 222 tttagaaac 230
>RF01058;MIR806;AP008213.1/24894769-24894520 39947:Oryza sativa
Japonica Group
Length = 250
Score = 123 bits (62), Expect = 1e-27
Identities = 168/207 (81%), Gaps = 2/207 (0%)
Strand = Plus / Plus
Query: 36 aaatgtttgacacggttgactttttagtatatgtttgaccattcgtcttattnnnnnnnt 95
|||||||| || | ||||| |||||| |||||||||||||||||||||||| |
Sbjct: 18 aaatgtttaacgccgttgattttttatcatatgtttgaccattcgtcttatttaaaaaat 77
Query: 96 ttaagtaattatttannnnnnncatatcatttgattcactgttaaatatattttcatgta 155
||||||||||||| | | |||||||||||||| ||||||||||||||| |||||
Sbjct: 78 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgta 137
Query: 156 --catatagttttacatattttacaaatatttttgaataagacgaacggttaaacatgtg 213
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Sbjct: 138 gacatataattttacatatctcataaaagttttaaaataaaacgaacggttaaatatgtg 197
Query: 214 ctaaaaagtcaacggtgtcaaacattt 240
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Sbjct: 198 ctaaaaagttaatgatgtcaaacattt 224
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 183 tttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttg 242
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Sbjct: 75 tttttaaataagacgaatggtcaaacatatgataaaaaatcaacggcgttaaacatttcg 16
Query: 243 aaacgga 249
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Sbjct: 15 aaacgga 9
