miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;FN362721.1/1345-1273 :
Length = 73
Score = 65.9 bits (33), Expect = 6e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatgtctgctt 73
|||||||||||||||||||||||||||||||||
Sbjct: 1 ggttcggtggtgtagtggttatcatgtctgctt 33
>RF00005;tRNA;ABKE01008606.1/1044-972 :
Length = 73
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 47 gtggtgtagtggttatcatgtctgctt 73
|||||||||||||||||||||||||||
Sbjct: 7 gtggtgtagtggttatcatgtctgctt 33
>RF00005;tRNA;ABAV01030470.1/19422-19494 :
Length = 73
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 gtgtagtggttatcatgtctgctt 73
||||||||||||||||||||||||
Sbjct: 10 gtgtagtggttatcatgtctgctt 33
>RF00005;tRNA;ABKE01001911.1/13816-13888 :
Length = 73
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 gtggtgtagtggttatcatgtctgctt 73
|||||||||||||||||| ||||||||
Sbjct: 7 gtggtgtagtggttatcacgtctgctt 33
>RF00005;tRNA;AASC02063444.1/5739-5811 :
Length = 73
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatgtctg 70
||||| |||||||||||||||||| |||||
Sbjct: 1 ggttctgtggtgtagtggttatcacgtctg 30
>RF00005;tRNA;ABEP02013290.1/31672-31744 :
Length = 73
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 48 tggtgtagtggttatcatgtctgctt 73
||||||||||||||||| ||||||||
Sbjct: 8 tggtgtagtggttatcacgtctgctt 33
>RF00005;tRNA;CU469464.1/269832-269904 :
Length = 73
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatg 66
||||||||||||||||||||| ||||
Sbjct: 1 ggttcggtggtgtagtggttaacatg 26
>RF00005;tRNA;AAWT01057479.1/394-466 :
Length = 73
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatgtctgctt 73
|||||| |||||||||||||||| ||||||||
Sbjct: 1 ggttcgatggtgtagtggttatccagtctgctt 33
>RF00005;tRNA;AL137798.8/32184-32256 :
Length = 73
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 gtggtgtagtggttatcatgt 67
|||||||||||||||||||||
Sbjct: 7 gtggtgtagtggttatcatgt 27
>RF00005;tRNA;AADK01000275.1/21978-22050 :
Length = 73
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatgtctgctt 73
||||| |||||||||||||||||| |||||||
Sbjct: 1 ggttccgtggtgtagtggttatcacatctgctt 33
>RF00005;tRNA;AADG05001167.1/32890-32962 :
Length = 73
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 41 ggttcggtggtgtagtggttatcatgtctgctt 73
||||| |||||||||||||||||| |||||||
Sbjct: 1 ggttccgtggtgtagtggttatcacatctgctt 33
>RF00005;tRNA;AAIM02000065.1/122134-122046 :
Length = 89
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 gtggtgtagtggttatcatgtctgc 71
|||||||||||||||||| ||||||
Sbjct: 7 gtggtgtagtggttatcacgtctgc 31
