miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;EU626443.1/55199-55104 47615:Gossypioides kirkii
Length = 96
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 aattcgattttgccaaaggagatttgccctg 77
|||||||||||||||||||||||||||||||
Sbjct: 56 aattcgattttgccaaaggagatttgccctg 86
>RF00445;mir-399;AC160628.37/99250-99151 3880:Medicago truncatula
(barrel medic)
Length = 100
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||||||||||||
Sbjct: 68 tttgccaaaggagatttgccctg 90
>RF00445;mir-399;AC160628.37/109895-109796 3880:Medicago
truncatula (barrel medic)
Length = 100
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||||||||||||
Sbjct: 68 tttgccaaaggagatttgccctg 90
>RF00445;mir-399;AC021043.4/36317-36195 3702:Arabidopsis thaliana
(thale cress)
Length = 123
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccctg 77
|||||||||||||||||||||
Sbjct: 93 tgccaaaggagatttgccctg 113
