miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00920;MIR444;EU947901.1/68-234 4577:Zea mays
Length = 167
Score = 103 bits (52), Expect = 2e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgcaggatcatacttgtggctttcttgcaagttg 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 71 acttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttcttgcaagttg 130
>RF00920;MIR444;EU971312.1/141-369 4577:Zea mays
Length = 229
Score = 65.9 bits (33), Expect = 5e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 20 aatcaattgcaggatcatacttgtggctttcttgcaagttg 60
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 162 aatccattgcaagatcatacttgtggctttcttgcaagttg 202
>RF00920;MIR444;AK249841.1/242-414 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 173
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 catacttgtggctttcttgcaagt 58
||||||||||||||||||||||||
Sbjct: 111 catacttgtggctttcttgcaagt 134
