miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 127 bits (64), Expect = 3e-29
Identities = 102/114 (89%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgt 62
|||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 63 gt--ctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatat 60
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||| |||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|||||| |||||||||||| ||||| ||| ||||| || ||||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 5e-28
Identities = 100/112 (89%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat--g 61
||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||| |
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctagacatatatgcg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||||||| | |||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
Score = 99.6 bits (50), Expect = 8e-21
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacat--atatg 61
||||||||||||| | | ||||||||||||| |||||||||||| || ||| ||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||||||| | ||||||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtctta 137
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 1e-25
Identities = 99/112 (88%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg-- 61
||||||||||||| ||| ||| ||||||||| ||||||||||||||| |||||||||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatatgcg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||||||| | |||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
Score = 91.7 bits (46), Expect = 2e-18
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacat--atatg 61
||||||||||||| | | ||||||||||||| |||||||||||| || ||| ||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| ||| | ||||||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagtctta 137
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaac--atat 58
||||||||||||||| |||| ||| |||||||||||||| |||||||||| || ||||
Sbjct: 23 ttataagactttctaacattgcccacattcatatatatgtcaatgaatctagacatatat 82
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||| || ||||||| |||||||||| || |||||| || ||||||||||||||||
Sbjct: 83 atgtgtttagattcattgacatctatatgaagatggacaattctagaaagtcttataa 140
Score = 95.6 bits (48), Expect = 1e-19
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaa--acatat 58
|||||||||||||||| ||| ||||| |||||||| |||| ||||||||||| ||||||
Sbjct: 140 ttataagactttctagaattgtccatcttcatatagatgtcaatgaatctaaacacatat 81
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|| |||||| ||||||| |||| ||||| ||| ||| | || |||||||||||||||
Sbjct: 80 atatgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttataa 23
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 111 bits (56), Expect = 2e-24
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacat--atat 60
|||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 103 bits (52), Expect = 5e-22
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg- 61
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 62 -tgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|| ||| |||||||||||| ||||| ||||||| | || ||||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 111 bits (56), Expect = 2e-24
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatat 60
|||||||||||||||||| ||| |||||||||||||||||||||||| | | ||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
||| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 3 ataagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatat 60
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
| |||| |||||||||||| ||||| ||| ||| | || ||||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatata--tg 61
||||||||||||||||| || | ||||||||| ||||||||||||||| ||||||| ||
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctagacatatatgtg 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||| || |||||||||||||||||| ||| ||||| | |||||||||||||
Sbjct: 86 tgtttagattcattaacatctatatgaatgtggacaaacctagaaagtctta 137
Score = 99.6 bits (50), Expect = 8e-21
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaa--acatatatg 61
||||||||||||| || |||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 137 taagactttctaggtttgtccacattcatatagatgttaatgaatctaaacacacatata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| | ||| || |||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtagacaatgctagaaagtctta 26
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatg 61
||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 137 taagactttctagcattgctcatattcatatagatgttaatgaatctagacacatatata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| ||| | ||||||||||| ||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagactta 26
Score = 99.6 bits (50), Expect = 8e-21
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
|||| |||||||| ||| ||| ||||||||| ||||||||||||||| |||||| |||
Sbjct: 26 taagtctttctagtattgcccacattcatatagatgttaatgaatctagacatatatatg 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| |||||| | || |||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtctta 137
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
||||||||| ||| ||| |||| ||||||||| ||||||||||||||| |||||| ||
Sbjct: 137 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttata 115
| |||| ||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 77 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 24
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--a 59
||||||||||||||| ||| ||||||||||||| ||||||||||| ||| | |||| |
Sbjct: 24 tataagactttctagtattgcccatattcatatagatgttaatgaacctagatatataca 83
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| |||||| |||||||||||||||||| ||| ||||| || ||| |||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 137
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 102/118 (86%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||||||||||||| ||| ||||||||| ||| ||||||||||| ||||||||
Sbjct: 140 ttataagactttctagcattgcccacattcatatagatgctaatgaatctagacatatat 81
Query: 61 gtgtctata--ttcattaacatctatataaatatggacnatactagaaagtcttataa 116
||| |||| ||||||||||||||||| | | ||| | || ||||||||||||||||
Sbjct: 80 atgtgtataggttcattaacatctatatgattgtgggcaatgctagaaagtcttataa 23
Score = 95.6 bits (48), Expect = 1e-19
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tat 58
|||||||||||||||||||| ||| | ||||||| ||||||||||| ||| ||| |||
Sbjct: 23 ttataagactttctagcattgcccacaatcatatagatgttaatgaacctatacacatat 82
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|| |||||| |||||||| ||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 83 atatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataa 140
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 103 bits (52), Expect = 5e-22
Identities = 103/120 (85%), Gaps = 4/120 (3%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatata- 59
|||||||||||||||||||| ||| ||||||||| ||||||||||||||| | |||||
Sbjct: 23 ttataagactttctagcattgcccacattcatatagatgttaatgaatctatatatatat 82
Query: 60 ---tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
||||| || |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 83 gtgtgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 142
Score = 87.7 bits (44), Expect = 3e-17
Identities = 101/120 (84%), Gaps = 4/120 (3%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatct----aaacat 56
|||||||||||||||||||| ||| ||||||||| |||||||||||||| | |||
Sbjct: 142 ttataagactttctagcattgcccacattcatatagatgttaatgaatctatacacacac 83
Query: 57 atatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||| | | || |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 82 atatatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 23
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
||||||||| ||| ||| |||| ||||||||| ||||||||||||||| |||||| ||
Sbjct: 26 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttata 115
| |||| ||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 86 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 139
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--a 59
||||||||||||||| ||| ||||||||||||| ||||||||||| ||| | |||| |
Sbjct: 139 tataagactttctagtattgcccatattcatatagatgttaatgaacctagatatataca 80
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| |||||| |||||||||||||||||| ||| ||||| || ||| |||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 26
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 114 ttataagactttctagcattacccacattcatatatatgttaatgaatctagacatatat 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgt 40
|||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 23 ttataagactttctagtattacccacattcatatatatgt 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 54 catatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||||||| |||||| |||||||||||| ||||| ||| ||| || |||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtctta 111
Query: 114 taa 116
|||
Sbjct: 112 taa 114
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaac--atat 58
|||||||||||||| ||||| ||| |||||||||||||||||| |||||| || ||||
Sbjct: 23 ttataagactttctggcattgcccacattcatatatatgttaataaatctagacatatat 82
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
||||| | | |||||||||||| ||||| ||| ||| | || ||||||||||||||||
Sbjct: 83 atgtgccaagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 140
Score = 95.6 bits (48), Expect = 1e-19
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatct--aaacatat 58
|||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||
Sbjct: 140 ttataagactttctagcattgcccacattcatatatatgttaatgaatcttggcacatat 81
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|| |||||| ||| |||||||| ||||| ||| ||| | || | ||||||||||||||
Sbjct: 80 atatgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataa 23
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
||||||||| ||||||| |||||||| || ||||||||||||||| |||||| ||||
Sbjct: 135 taagactttgtagcattgcttatattcatctagatgttaatgaatctagacatatgtgtg 76
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||| |||||||||||||||||| ||| ||| | || |||||||| ||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagactta 26
Score = 81.8 bits (41), Expect = 2e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
|||| |||||||||||| ||| ||||||||| ||||||||||||||| ||| | || ||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctagacacacatatg 85
Query: 64 tctatattcattaacatctatataaatat 92
|||| ||||||||||||||| || |||||
Sbjct: 86 tctagattcattaacatctagatgaatat 114
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 5e-19
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
|||||||||||||||||| ||| |||||| || ||||||||||||||||||||| ||||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 62 tgtctatattcattaacatctatata 87
||| || |||||||||||| ||||||
Sbjct: 86 tgtttagattcattaacatatatata 111
Score = 61.9 bits (31), Expect = 2e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 31 atatatatgttaatgaatctaa--acatatatgtgtctatattcattaacatctatataa 88
|||||||||||||||||||||| ||||| || ||| || ||||||||||||||| || |
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 89 atatggacnatactagaaagtctta 113
|| ||| || |||||||||||||
Sbjct: 50 atgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
||||||||||||||||| | |||||||||| ||||||||||||||| |||| |||
Sbjct: 26 taagactttctagcattgcctatattcatattgatgttaatgaatctaggtatatgcgtg 85
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||| |||||||||||| ||||| ||| ||||| || |||||||||||||
Sbjct: 86 tctagattcattaacatttatatgaatgtggacaatgctagaaagtctta 135
Score = 85.7 bits (43), Expect = 1e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
||||||||||||||||| |||| ||||||||| ||||||||||||||| ||| || |
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctagacacgcatata 76
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||| ||||||||||||| |||| ||||| | | || |||||||||||||
Sbjct: 75 cctagattcattaacatcaatatgaatataggcaatgctagaaagtctta 26
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 74/82 (90%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 5 aagactttctagcattatccatattcatatatatgttaatgaatctaa--acatatatgt 62
||||||||||||||||| ||| |||||| || |||||||||||||||| |||||||| |
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatctaaacacatatatat 86
Query: 63 gtctatattcattaacatctat 84
||||| ||||||||||||||||
Sbjct: 87 gtctagattcattaacatctat 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 37 atgttaatgaatctaaacatatat--gtgtctatattcattaacatctatataaatatgg 94
||||||||||||||| |||||||| |||| || ||||||||||||||| || ||| |||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgg 45
Query: 95 acnatactagaaagtctt 112
|| ||||||||||||
Sbjct: 44 gtaatgctagaaagtctt 27
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
||||||||||||||||| ||| ||||||||| |||||||||||||| ||| |||| ||
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 78
Query: 62 tgtctatattcattaacatctatat 86
|||||| ||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatat 53
Score = 75.8 bits (38), Expect = 1e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
||||||||| ||||||| || ||||||||| ||||||||||||||| ||| | |||
Sbjct: 26 taagactttttagcattcctcacattcatatagatgttaatgaatctagacacacatata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| |||| |||||||||||||||||| ||| ||| | || |||||||||||||
Sbjct: 86 tttctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
||||||||||||||||| ||| ||||||||| |||||||||||||| ||| |||| ||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 85
Query: 62 tgtctatattcattaacatctatat 86
|||||| ||||||||||||||||||
Sbjct: 86 tgtctagattcattaacatctatat 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
||||||||| ||||||| || ||||||||| ||||||||||||||| ||| | |||
Sbjct: 137 taagactttttagcattgctcacattcatatagatgttaatgaatctagacacacatata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| |||| |||||||||||||||||| ||| ||| | || |||||||||||||
Sbjct: 77 tttctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 2e-18
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat--g 61
|||||||||||||||| | || ||||||||| |||| |||||||||| |||||||| |
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatg 54
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| ||| || |||||||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
|||||||||||||||| | ||| ||||||||| |||||||||||||| | ||||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 62 tgtctatattcattaacatctatat 86
|||||| ||||||| ||||||||||
Sbjct: 62 tgtctagattcatttacatctatat 86
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 89.7 bits (45), Expect = 7e-18
Identities = 102/119 (85%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaa-tgaatctaaaca--ta 57
||||||||||||||||||||| ||| ||||||||| ||||||| | |||||| ||| ||
Sbjct: 23 ttataagactttctagcattacccacattcatatagatgttaaattaatctagacaccta 82
Query: 58 tatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|| | |||| |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 83 catatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 141
Score = 81.8 bits (41), Expect = 2e-15
Identities = 101/119 (84%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacata--t 58
|||||||||||||||||||| ||| ||||||||| ||||||||||||||| | ||| |
Sbjct: 141 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagatatatgt 82
Query: 59 atgtgtctatattca-ttaacatctatataaatatggacnatactagaaagtcttataa 116
| ||||||| ||| | ||||||||||||| ||| ||| || ||||||||||||||||
Sbjct: 81 aggtgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataa 23
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 117 ttataagactttctagcattgtccacattcatatatatgttaatgaatcta 67
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgtt 41
||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 23 ttataagactttctagcattacccacattcatatatatgtt 63
Score = 63.9 bits (32), Expect = 4e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||| |||||||||||| ||||| ||| ||||| || ||||||||||||||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataa 117
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaa--acatatatg 61
||||||||||||||||| ||| || |||||| |||||||||||||||| ||||| ||
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatctaaacacatacata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||| |||||| || ||| ||| | || |||||||||||||
Sbjct: 86 tgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtctta 137
Score = 75.8 bits (38), Expect = 1e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
||||||||||||||||| ||| |||||| || ||| ||||||||||| ||||| ||||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||| || |||||||||||| ||||| || ||| | || |||||||||||||
Sbjct: 77 tgtttagattcattaacatttatatgtatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatatg 61
||||||||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggcacacatata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||| |||||||||||| ||| | | |||||||||||||
Sbjct: 77 tgtctagattcattagtatctatataaatgtgggcaacgctagaaagtctta 26
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
|||||||||||||| || ||| ||| ||||| || ||||||||||| |||||||||||
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 64 t--ctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| ||| |||||||| ||| ||||| ||| ||| | || |||||||||||||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtctta 137
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
|||||||||||||||||| ||| |||||| || |||||||||||||| |||| | ||
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctagacatgtgtata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| | || |||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 86 tatttagattcattaacatctatatgtatatggacaatgctagaaagtctta 137
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatctaaatatatacaca 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| ||||||||||| ||| || ||| ||| || |||||||||||||
Sbjct: 77 tgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaa--acatatatg 61
||||||||||||||||| ||||| |||||| | |||||||||||||| ||||| ||
Sbjct: 26 taagactttctagcattgctcatatacatatagacgttaatgaatctaaacacatacata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| ||||||||||||||| || ||||||| | || ||| |||||||||
Sbjct: 86 tgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtctta 137
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
||||||||| ||||||| |||||||||| || ||||||||||||||| ||||| ||||
Sbjct: 137 taagactttttagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||| || |||||||||| ||||||| ||||| | || |||||||||||||
Sbjct: 77 tgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat--g 61
||||||||| ||||||| ||| ||||||||| || | ||||||||||||||||||| |
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatgtg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||| ||||| ||| ||| | | |||||||||||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtctta 26
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
|||||||||||||| || ||| |||||||||||||||||||||||| | ||| ||||
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
||| || ||||||| | |||||||| ||| ||| | || ||| |||||||||
Sbjct: 86 tgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatc--taaacatatatg 61
||||||||||||||||| || ||||||||| ||||||||||||| || || ||||||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatctatatacttatatg 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||| ||||||| | ||| ||| | || |||||||||||||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtctta 26
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
||||||||||||||||| ||| ||||| ||| ||| |||||||||| | ||||||| |
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatataag 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| | || |||||||||||||||||| ||| || | || |||||||||||||
Sbjct: 86 tatatagattcattaacatctatatgaatgcgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 61
||||||||||||||||| |||||||||| || ||||||||||||||| ||||| ||||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| | || ||||||||||||| |||| | ||| | ||||||||||||||||
Sbjct: 86 tatttagattcattaacatccatatgtacgtgggcaatactagaaagtctta 137
Score = 75.8 bits (38), Expect = 1e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaa--catatatg 61
||||||||||||| ||| ||| | ||||| ||||||||||||||||| |||| ||
Sbjct: 137 taagactttctagtattgcccacgtacatatggatgttaatgaatctaaatacatacata 78
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| ||||||||||||||| || ||||||| | || |||||||||||||
Sbjct: 77 tgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 81.8 bits (41), Expect = 2e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtctta 116
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata 57
||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||
Sbjct: 116 taagactttctagcattgtccatatttatatagatgttaatgaatctagacata 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 75 taacatctatataaatatggacnatactagaaagtctta 113
|||||||||||||||| ||| | || |||||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||||||||||||||| |||||| || ||||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctagacatatat 82
Score = 60.0 bits (30), Expect = 7e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 53 acatatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtctt 112
|||||||| |||||| ||||||||||||||| || ||| |||| || ||||||||||||
Sbjct: 86 acatatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctt 27
Query: 113 a 113
|
Sbjct: 26 a 26
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
|||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||
Sbjct: 117 tataagactttctagcattacccacatacatatagatgttaatgaatctaaacatat 61
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
|||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||
Sbjct: 24 tataagactttctagcattacccacatacatatagatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 79.8 bits (40), Expect = 7e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 70
|||||||||| ||| |||||||| ||||||||||||||| |||||||| |||||| ||
Sbjct: 128 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatgtctacat 69
Query: 71 tcattaacatctatat 86
||||||||||| ||||
Sbjct: 68 tcattaacatcaatat 53
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 70
|||||||||| || | |||||||| |||||||||||| || |||||||| |||||| ||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtagacatatatatgtctagat 92
Query: 71 tcattaacatctatat 86
||||||||||| ||||
Sbjct: 93 tcattaacatcaatat 108
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaaca 55
|||||||||||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 60.0 bits (30), Expect = 7e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
||||| || |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 114
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatg 61
||||||||||||||||| || || |||||| ||||||||||||||||||| || ||
Sbjct: 137 taagactttctagcattgctcacatacatatagatgttaatgaatctaaacacgtacata 78
Query: 62 tgtctatattcattaacatcta 83
||||||||||||||||||||||
Sbjct: 77 tgtctatattcattaacatcta 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaacatatat--gtgtctatattcattaacatctat 84
|||||| || |||||||||||| || |||||| | |||| || ||||||||||||||||
Sbjct: 49 attcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatctat 108
Query: 85 at 86
||
Sbjct: 109 at 110
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaaca 55
|||||||||||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 60.0 bits (30), Expect = 7e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
||||| || |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 114
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 121 tataagactttctagcattacccatattcatatagatgctaatgaatcta 72
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||| |||||||||||| |||||||||||| |||||||||||||||
Sbjct: 24 tataagtctttctagcattgctcatattcatatagatgttaatgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtcttata 115
|||| |||||||||||||||||| |||||| | || |||||||| ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttata 24
Score = 50.1 bits (25), Expect = 6e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtcttata 115
|||| |||||||| ||||||||| ||||||| || |||||||||||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttata 121
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 80/94 (85%), Gaps = 4/94 (4%)
Strand = Plus / Minus
Query: 27 attcatatatatgttaatgaatctaaaca----tatatgtgtctatattcattaacatct 82
||||||||| ||||||||||||||| ||| ||| ||||| || ||||||||||||||
Sbjct: 116 attcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacatct 57
Query: 83 atataaatatggacnatactagaaagtcttataa 116
|||| ||| ||| | || ||||||||||||||||
Sbjct: 56 atatgaatgtgggcaattctagaaagtcttataa 23
Score = 73.8 bits (37), Expect = 4e-13
Identities = 77/90 (85%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatct----aaacat 56
|||||||||||||||| ||| ||| ||||||||| |||||||||||||| | ||||
Sbjct: 23 ttataagactttctagaattgcccacattcatatagatgttaatgaatctatacacacat 82
Query: 57 atatgtgtctatattcattaacatctatat 86
|| ||||| || ||||||||||||||||||
Sbjct: 83 atgtgtgtatagattcattaacatctatat 112
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctagacat 59
Score = 65.9 bits (33), Expect = 1e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgt 40
||||||||||||||||| |||| ||||||||| ||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 77 acatctatataaatatggacnatactagaaagtctta 113
|||||||||| ||| ||||| || |||||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||
Sbjct: 23 ttataagactttctagcattgcccacattcatatatacgttaatgaatctagacat 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||| |||||||||| | ||||| ||| ||| | || ||||||||||||||||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataa 23
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatat 28
|||||||||||||||||||| |||||||
Sbjct: 110 ttataagactttctagcattgtccatat 83
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaat 48
||||||||||||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 96 ttataagactttctagcattacccatattcatatagatgataatgaat 49
Score = 50.1 bits (25), Expect = 6e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 69 attcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||||| ||||||||| ||||||| || ||||||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataa 96
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||
Sbjct: 110 ttataagactttctagcattgcccacattcatatatacgttaatgaatctagacat 55
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatat 28
|||||||||||||||||||| |||||||
Sbjct: 23 ttataagactttctagcattgtccatat 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||| |||||||||| | ||||| ||| ||| | || ||||||||||||||||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataa 110
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatcta 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||||| |||| ||||||||||||| ||||||| || |||||||||||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 83/98 (84%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 68
|||||||||| |||| |||||||| ||||||||||||||| || |||||| || |||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 69 attcattaacatctatataaatatggacnatactagaa 106
|||||||| ||||||||| ||| ||||| || ||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaa 33
Score = 63.9 bits (32), Expect = 4e-10
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgt--gtctat 68
|||||||||| |||| ||||||||| ||| ||||||||||| ||||||| | |||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 69 attcattaacatctatataaatatgga 95
||||||||||||| |||| ||| ||||
Sbjct: 93 attcattaacatcaatatgaatgtgga 119
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattca 73
||||||| |||||||||||| ||||||||||||||| |||||||| | |||| |||||
Sbjct: 118 tagcatttcccatattcatattgatgttaatgaatctagacatatatctatctagattca 59
Query: 74 ttaacatc 81
||||||||
Sbjct: 58 ttaacatc 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 37 atgttaatgaatctaaacatatatgtgtctatattcattaacatctatataaatatgg 94
||||||||||||||| | | |||| |||||| ||||||||||||| |||| |||||||
Sbjct: 52 atgttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatgg 109
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 108 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagacat 53
Score = 63.9 bits (32), Expect = 4e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||| |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 108
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg 61
|||||| | |||||||||| ||| ||||||||| |||||||||||||| |||||||||
Sbjct: 24 tataagtcattctagcattgcccacattcatatagatgttaatgaatctggacatatatg 83
Query: 62 tgtctatattcattaacatctata 85
|| ||| |||||||| |||||||
Sbjct: 84 tggctagattcattagtatctata 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 41 taatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnata 100
||||||||||| || |||| |||| | |||||||||||||||||| ||| ||| | ||
Sbjct: 98 taatgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 101 ctagaaagtcttata 115
|||||| | ||||||
Sbjct: 38 ctagaatgacttata 24
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 68
||||||||||| ||||||||||||| |||||||||||||| | ||| || | | ||||
Sbjct: 130 ttctagcattacccatattcatatagatgttaatgaatctagacacacatctatatctaa 71
Query: 69 attcattaacatctatat 86
||||||||||||||||||
Sbjct: 70 attcattaacatctatat 53
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgt--ctat 68
|||||||||| ||| || |||||| |||||||||||| || | ||| |||||| |||
Sbjct: 33 ttctagcattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtctag 92
Query: 69 attcattaacatctatataaatatgg 94
|||||||||||||||||| |||||||
Sbjct: 93 attcattaacatctatatgaatatgg 118
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 69.9 bits (35), Expect = 7e-12
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 13 ctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattc 72
|||||||| ||| |||||||||||||||||||||||| | |||||| |||||| ||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatct--agatatatatgtctagattc 33
Query: 73 attaacatctatat 86
|||||||| |||||
Sbjct: 32 attaacatatatat 19
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaacatatatgtgtctatattcattaacatctatat 86
||||||||||||||||||||||||| ||||||| | |||| |||||||||||| |||||
Sbjct: 15 attcatatatatgttaatgaatctagacatata--tatctagattcattaacatatatat 72
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 68
|||||||||| ||||||||||||| ||||||||||||||| || |||||| | ||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 69 attcattaacatctatat 86
||||||||||||| ||||
Sbjct: 93 attcattaacatcaatat 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 68
|||||||||| ||| |||||||| ||||||||||||||| | | ||||| ||| ||
Sbjct: 130 ttctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtatag 71
Query: 69 attcattaacatctatataaatatgga 95
||||||||||||| |||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatgga 44
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 68
|||||||||| ||| ||||||||| ||||| ||||||||||| |||||| ||||||
Sbjct: 130 ttctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtctag 71
Query: 69 attcattaacatctatat 86
||||||||||||||||||
Sbjct: 70 attcattaacatctatat 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 84
||||||||| ||||||||||||||| ||| ||||| | | || |||||| |||||||||
Sbjct: 49 attcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatctat 108
Query: 85 at 86
||
Sbjct: 109 at 110
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 94/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
|||||||||||| |||| |||| || ||||| |||||||||||||| ||||||| ||
Sbjct: 26 taagactttctaccattgtccacat--atatagatgttaatgaatctagaaacatacata 83
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| |||| ||||||||| ||||| |||||| ||||| || ||| |||||||||
Sbjct: 84 tatctagattcattaatatctaaataaatgtggacaatgctaaaaagtctta 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
||||||||| ||||||| |||| ||| || || || |||||||||||| | |||| |||
Sbjct: 135 taagactttttagcattgtccacatttatttagatattaatgaatctagatatatgtatg 76
Query: 62 tgtctatattcattaacatctatata 87
| |||| |||||||||||||||||||
Sbjct: 75 tttctagattcattaacatctatata 50
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatatg 61
||||||||||||||||| ||| |||||||| |||| ||||||||||| ||| ||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| ||||||| ||||||||| ||| ||| | || ||||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
|||||||||||| |||| ||| ||||||||| ||| |||||||||| |||||||||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 64 t--ctatattcattaacatctatataaatatggacnatactagaaagtctta 113
| ||| |||||||| ||| |||| ||| ||| | || |||||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattca 73
||||||| | || ||||||||| ||||||||||||||| ||||||| ||||| |||||
Sbjct: 125 tagcatttttcacattcatatagatgttaatgaatctatgcatatatatgtcttgattca 66
Query: 74 ttaacatcta 83
||||||||||
Sbjct: 65 ttaacatcta 56
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattca 73
||||||| ||| |||||| || ||||||||||||| | |||||||| || || |||||
Sbjct: 36 tagcatttcccacattcatgtagatgttaatgaatcaagacatatatatgcatagattca 95
Query: 74 ttaacatctatat 86
|||||||||||||
Sbjct: 96 ttaacatctatat 108
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatata--tg 61
||||||||| || |||| ||| ||||| ||| ||||||||||||||| | ||||| ||
Sbjct: 137 taagactttttaacattgcccacattcacatagatgttaatgaatctagatatatatgtg 78
Query: 62 tgtctatattcattaacatctatat 86
|||||| ||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatat 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 61
|||||||| |||||||| || ||||||||| |||||||||||||| | ||| ||||
Sbjct: 26 taagacttcctagcattgctcacattcatatagatgttaatgaatctagacacacatata 85
Query: 62 tgtctatattcattaacatctat 84
| |||| ||||||||||||||||
Sbjct: 86 tatctagattcattaacatctat 108
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 65.9 bits (33), Expect = 1e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgt-ctata 69
|||||||||| ||| |||||||| |||||||||||||||||||||| | ||| ||| |
Sbjct: 129 ttctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtgctaga 70
Query: 70 ttcattaacatctatat 86
|||||||||||| ||||
Sbjct: 69 ttcattaacatcaatat 53
Score = 50.1 bits (25), Expect = 6e-06
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta-aacatatatgtgtctata 69
|||||||||| ||| |||||||| ||||||||||||||| ||||| || ||| || |
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagcacatacatatgtttaga 92
Query: 70 ttcattaacatctatat 86
|||||||||||| ||||
Sbjct: 93 ttcattaacatcaatat 109
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacat--atatgtgtctat 68
|||||||||| |||| ||||||||| ||| |||||||| ||||||| ||||| || ||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtatag 71
Query: 69 attcattaacatctatataaatat 92
|||||||| ||||||||| |||||
Sbjct: 70 attcattagcatctatatgaatat 47
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaa--catatatgtgtctat 68
||||| |||| || ||||||||||| ||| ||||||||||| | ||||||| ||| ||
Sbjct: 33 ttctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgtttaa 92
Query: 69 attcattaacatctatataaatatgga 95
|||||||| ||||||||| ||| ||||
Sbjct: 93 attcattagcatctatatgaatgtgga 119
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
||||||||||||||| |||| ||| ||||||||| ||| ||||||||||| ||||||||
Sbjct: 120 ttataagactttctatcattgcccacattcatatagatgctaatgaatctagacatatat 61
Score = 54.0 bits (27), Expect = 4e-07
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 55 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|||||| |||||| |||||||| ||||||||| ||| ||| | || |||||||||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 115 aa 116
||
Sbjct: 119 aa 120
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatata 59
|||| |||||||||||| ||| ||||||||| ||||||||||||||| |||||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctagacatata 81
Score = 50.1 bits (25), Expect = 6e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||||||||||||| ||| ||| | || |||||||| ||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagactta 26
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||||||||| |||| ||||||||| ||||||| |||||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatcta 40
Score = 61.9 bits (31), Expect = 2e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||||| |||| ||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtctta 87
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 79/94 (84%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 24 catattcatatatatgttaatgaatctaaacat--atatgtgtctatattcattaacatc 81
||||||||||| ||| |||||||||||||||| |||| | |||| |||||||| ||||
Sbjct: 117 catattcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatc 58
Query: 82 tatataaatatggacnatactagaaagtcttata 115
|||| |||||||| ||||||||| | ||||||
Sbjct: 57 aatatgaatatggaaaatactagaatgacttata 24
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||||||||| |||| ||||||||| |||||||| ||||||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatcta 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||||| ||| |||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 66 tgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 119
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgt 40
||||||||| |||||||||||||||||||||| ||||
Sbjct: 26 taagactttttagcattatccatattcatatagatgt 62
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatata 37
||||||||||||||||||| ||||||||||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatatata 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 tatataaatatggacnatactagaaagtcttata 115
||||| ||||||||| || |||||||||||||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttata 86
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatc 49
||||||||||||||||| | |||| ||||||||| |||||||||||||
Sbjct: 120 tataagactttctagcactgtccacattcatatagatgttaatgaatc 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 69 attcattaacatctatataaatatggacnatactagaaagtcttata 115
|||||||||||||||||| ||| ||||| | |||||||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttata 120
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatata 35
|||||||||||||||||| | ||||||||||||||
Sbjct: 23 ttataagactttctagcactgtccatattcatata 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 78 catctatataaatatggacnatactagaaagtcttataa 116
||||||||| ||||||||| | ||||||||||||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataa 23
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatg 61
||||||||||||||| | | | ||||||||| ||||||||| ||||| ||| || |||
Sbjct: 26 taagactttctagcactgtttacattcatatagatgttaatggatctatacacttacatg 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttata 115
|||||| ||||||| |||||||| | || ||| | || |||||||||||||||
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttata 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatct--aaacatata 59
||||||||||||||||||| ||| |||| ||| |||| ||||||||| | |||| ||
Sbjct: 139 tataagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacatgta 80
Query: 60 tgtgtctatattcattaacatctatat 86
|||| || || |||||||||||||||
Sbjct: 79 agtgtatagatccattaacatctatat 53
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||||||||| |||| ||||||||| |||||||| ||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaataaatcta 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 64 tctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||| ||| |||||||||||||| ||| ||||| || |||||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| || |||||||||||||||||| ||| ||| | || |||||||||||||
Sbjct: 65 atgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatg 45
||||||||||||||||| | | ||||||||| |||||||||
Sbjct: 26 taagactttctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||||| |||||||||||||||||| ||| ||| | || |||||||||||||
Sbjct: 79 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaat 48
||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaat 70
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||||||||| ||| ||||||||| ||||||| |||||||
Sbjct: 23 ttataagactttctagcattgcccacattcatatagatgttaacgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 69 attcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||| ||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataa 23
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatat 36
|||||||||||||||||||| ||| ||||||||||
Sbjct: 116 ttataagactttctagcattgcccacattcatatat 81
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||||||||| |||| ||||| ||| |||||||| ||||||
Sbjct: 23 ttataagactttctagcattgtccacattcacatagatgttaataaatcta 73
Score = 60.0 bits (30), Expect = 7e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 60 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
|||||||| ||| |||||||||||| | ||| ||||| || ||||||||||||||||
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataa 23
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatatatatgtt 41
|||||||||||||||||||| |||| ||||||||| |||||
Sbjct: 119 ttataagactttctagcattgtccacattcatatagatgtt 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 76 aacatctatataaatatggacnatactagaaagtcttataa 116
||||||||||| ||| ||||| || ||||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataa 119
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 68
|||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 69 attcattaacatctatat 86
||||||||||| ||||||
Sbjct: 70 attcattaacacctatat 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaacatatat--gtgtctatattcattaacatctat 84
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 49 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 108
Query: 85 ataaatatgga 95
|| ||| ||||
Sbjct: 109 atgaatgtgga 119
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
||||||||||||||||| ||| ||||||||| |||||||| |||||| ||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaataaatctagacatat 59
Score = 50.1 bits (25), Expect = 6e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| ||| |||||||||||||| ||| ||| | || |||||||||||||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtctta 113
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 68
|||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 69 attcattaacatctatat 86
||||||||||| ||||||
Sbjct: 63 attcattaacacctatat 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 27 attcatatatatgttaatgaatctaaacatatatg--tgtctatattcattaacatctat 84
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 84 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 25
Query: 85 ataaatatgga 95
|| ||| ||||
Sbjct: 24 atgaatgtgga 14
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 75/89 (84%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaacata--tatgtgtctatattcattaacatctat 84
|||||| || ||||||||||||||||||||| ||| |||||| ||| |||||||||||
Sbjct: 49 attcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatctaa 108
Query: 85 ataaatatggacnatactagaaagtctta 113
|| || ||| | || |||||||||||||
Sbjct: 109 atgtatgtgggcaatgctagaaagtctta 137
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat--atg 61
||||||||||||||||| ||| || ||| || |||||||| |||||| |||||| ||
Sbjct: 137 taagactttctagcattgcccacatacatttagatgttaataaatctagacatatacata 78
Query: 62 tgtctatattcattaacatcta 83
||| || |||||||||||||||
Sbjct: 77 tgtttagattcattaacatcta 56
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg 61
||||||||||| ||||| || ||| || |||| | |||||||||||||||| ||| ||
Sbjct: 135 tataagactttttagcactacccacatacataaagatgttaatgaatctaa--atacata 78
Query: 62 tgtctatattcattaacatcta 83
|||||| |||||||||||||||
Sbjct: 77 tgtctagattcattaacatcta 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 63
||||||||| |||| || ||| |||||| || ||||||||||||||| || ||||||
Sbjct: 26 taagactttgtagcgttgcccacattcatttagatgttaatgaatctagac--atatgta 83
Query: 64 tctatattcattaacatct 82
| || ||||||||||||||
Sbjct: 84 tttagattcattaacatct 102
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaa--acatatatgtgtctat 68
|||||||||| ||| |||||||| |||||||||||||||| | |||||| ||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctag 45
Query: 69 attcattaacatctatat 86
||||||||||||| ||||
Sbjct: 44 attcattaacatcaatat 27
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatat 56
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 70
|||||||||| | || ||||||| ||||||||||||||| | |||||| |||||| ||
Sbjct: 128 ttctagcatttttcacattcatactcatgttaatgaatctagatatatatatgtctaaat 69
Query: 71 tcattaacat 80
||||||||||
Sbjct: 68 tcattaacat 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 37 atgttaatgaatctaaacatatatgtgtctatattcattaacat 80
|||||||||||| || |||||||| | |||| ||||||||||||
Sbjct: 59 atgttaatgaatttagacatatatatatctagattcattaacat 102
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 7e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 69 attcattaacatctatataaatatggacnatactagaaagtctta 113
||||||||||||||| |||||| ||||| ||||||||||| ||||
Sbjct: 53 attcattaacatctaaataaatgtggacaatactagaaagcctta 97
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 60.0 bits (30), Expect = 7e-09
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 55 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 114
|||||||||| || ||||||||||||||||||| || ||| | || |||||||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttat 114
Query: 115 a 115
|
Sbjct: 115 a 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatat 57
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg-- 61
||||||||| |||||||| ||| ||||||||| ||| |||| |||||| | |||||
Sbjct: 26 taagactttatagcattacccacattcatatagatgctaataaatctatatatataataa 85
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||||||| ||||||||| ||| ||| | || ||||||||||||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtctta 137
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||||| |||| ||| ||||||||| ||| ||||||||||| ||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctagacat 85
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 60.0 bits (30), Expect = 7e-09
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 67 atattcattaacatctatataaatatggacnatactagaaagtcttata 115
|||||||||| ||| ||||| ||| ||||| ||||||||||||||||||
Sbjct: 72 atattcattagcatttatatgaatgtggacaatactagaaagtcttata 24
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaat 48
||||||||||||||| ||| |||| ||||||||| ||| ||||||||
Sbjct: 24 tataagactttctagtattgtccacattcatataaatgctaatgaat 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcat 32
|||||||||||||||||||| ||||||||||
Sbjct: 96 ttataagactttctagcattgcccatattcat 65
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| |||| |||||||| ||||||||||||||| ||||||||
Sbjct: 130 ttctagcattctccacattcatattaatgttaatgaatctagacatatat 81
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| ||||||||||||| |||||||||||||||
Sbjct: 117 ttctagcattttccatattcatattgatgttaatgaatcta 77
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
|||||| | |||||||||| |||| |||||||| ||||||||||||||| ||||||
Sbjct: 121 tataagtcattctagcattttccacattcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 33 ttctagcattacccatattcatatggatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 27 attcatatatatgttaatgaatctaaacatatatgt--gtctatattcattaacatctat 84
|||||||| ||||||||||||||| |||||||| | ||| ||||||||||||| ||
Sbjct: 114 attcatattaatgttaatgaatctagacatatatatccaactagattcattaacatccat 55
Query: 85 ataaatatgg 94
|| |||||||
Sbjct: 54 atgaatatgg 45
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| ||||||||||||| |||||||||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatcta 66
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 56.0 bits (28), Expect = 1e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 81 ctatataaatatggacnatactagaaagtcttata 115
|||||||||||||||| |||||| |||||||||||
Sbjct: 60 ctatataaatatggacgatactaaaaagtcttata 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 80 tctatataaatatggacnatactagaaagtctta 113
||||||||||||||||| || ||| |||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtctta 26
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtctatatt 71
||||||| ||| ||||||||| ||| ||||||||||||||||| | | | |||| |||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagatt 68
Query: 72 cattaacatctatat 86
|||||||||||||||
Sbjct: 67 cattaacatctatat 53
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
||||||| ||| |||||| |||||| |||||||||||||||
Sbjct: 33 ttctagccttacccatatgcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 68
||||||||||| | | ||||||||| |||||||||||||| | ||| || | | ||||
Sbjct: 33 ttctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatctaa 92
Query: 69 attcattaacatctatata 87
|||||||||||||||||||
Sbjct: 93 attcattaacatctatata 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 60 tgtgtctatattcattaacatctatat 86
|||||||| ||||||||||||||||||
Sbjct: 79 tgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/91 (83%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tata 59
|||||| | |||||||||| | || |||||||| || |||||||||||||| | ||||
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 60 tgtgtctatattcattaacatctatataaat 90
| |||||| ||||||||||| | ||||||||
Sbjct: 79 tatgtctagattcattaacaccaatataaat 49
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatcta 51
||||||||||||||||| ||| || |||||| |||||||||||||||
Sbjct: 126 taagactttctagcattgcccacatacatatagatgttaatgaatcta 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 69 attcattaacatctatataaatatggacnatactagaaagtctta 113
|||||||||||||||||| || ||| | || |||||||||||||
Sbjct: 82 attcattaacatctatatgtatgtgggcaatgctagaaagtctta 126
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 14 tagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctatatt 71
||||||| ||| |||||||| ||||||||||||||| | | |||||| |||||| |||
Sbjct: 36 tagcatttcccacattcatatttatgttaatgaatctagatagatatatatgtctagatt 95
Query: 72 cattaacatctatataaat 90
||||| |||| ||||||||
Sbjct: 96 cattatcatcaatataaat 114
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 23 ccatattcatatatatgttaatgaatctaaacatatatgtgtctat--attcattaacat 80
|||||||||||| ||||||||||||||| |||||||| | | ||| ||| ||||||||
Sbjct: 45 ccatattcatattgatgttaatgaatctagacatatatatctatatagatttattaacat 104
Query: 81 ctatataaat 90
| ||||||||
Sbjct: 105 caatataaat 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 55 atatatgtgtctatattcattaacatctatataaatatgg 94
|||||| |||||| ||||||||||||| |||| |||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgg 45
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 68
|||||||||| ||| |||||||| || |||||||||||| | | ||||| ||||||
Sbjct: 130 ttctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtctag 71
Query: 69 attcattaacatctatataaat 90
||||||||||||| ||||||||
Sbjct: 70 attcattaacatcaatataaat 49
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
||||||||||||||||| ||| |||||| || |||||| |||||||||||||||
Sbjct: 118 taagactttctagcattg-ccacattcatttagatgttattgaatctaaacatat 65
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||| | |||||||||| || |||||||||| ||| ||||||||||| ||||||||
Sbjct: 139 tataagtcattctagcattttctatattcatattgatgctaatgaatctagacatatat 81
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 68
|||||||||| ||| |||||||| ||||||||||||||| || |||||| | ||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctag 45
Query: 69 attcattaacatctatat 86
||||||||||||| ||||
Sbjct: 44 attcattaacatcaatat 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 84
|||||||| ||||||||||||||| | | ||||| |||||| ||||||||||||| ||
Sbjct: 23 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaat 82
Query: 85 at 86
||
Sbjct: 83 at 84
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 23 ccatattcatatatatgttaatgaatctaaacatatatgtgtctat--attcattaacat 80
|||||||||||| ||||||||||||||| |||||||| | | ||| ||| ||||||||
Sbjct: 116 ccatattcatattgatgttaatgaatctagacatatatatctatatagatttattaacat 57
Query: 81 ctatataaat 90
| ||||||||
Sbjct: 56 caatataaat 47
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 55 atatatgtgtctatattcattaacatctatataaatatgg 94
|||||| |||||| ||||||||||||| |||| |||||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatatgg 116
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatata 35
|||||||||||| |||||||||||| |||||||||
Sbjct: 23 ttataagactttatagcattatccacattcatata 57
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 ttataagactttctagcattatccatattcatata 35
||||||||||||||||||||||||| ||| |||||
Sbjct: 96 ttataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 68
|||||||||| | |||||||||| |||||||||||||| | | ||||| |||||||
Sbjct: 33 ttctagcatttcctatattcatattgatgttaatgaatctagatagatatagatgtctat 92
Query: 69 attcattaacatctatat 86
||||||||||||| ||||
Sbjct: 93 attcattaacatcaatat 110
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 68
|||||||||| ||| |||||||| |||||||||||||| | | |||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtctac 92
Query: 69 attcattaacatctatat 86
||||||||||||| ||||
Sbjct: 93 attcattaacatcaatat 110
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacata 57
|||||||||| | ||||||||||| ||||||||||||||| |||||
Sbjct: 33 ttctagcattgcctatattcatatagatgttaatgaatctagacata 79
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/68 (85%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 27 attcatatatatgttaatgaatctaaacatatatgt--gtctatattcattaacatctat 84
|||||||| ||||||||||||||| | |||| | | ||||| ||||||||||||||||
Sbjct: 114 attcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatctat 55
Query: 85 ataaatat 92
|| |||||
Sbjct: 54 atgaatat 47
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 36 tagcattacccacattcatattgatgttaatgaatctagacatatat 82
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/75 (84%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctatatt 71
||||||| ||| |||||||| ||||||||||||||| | | ||||| |||||| |||
Sbjct: 127 tagcatttcccacattcatattaatgttaatgaatctagatagatatatatgtctagatt 68
Query: 72 cattaacatctatat 86
|||||||||| ||||
Sbjct: 67 cattaacatcaatat 53
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 27 attcatatatatgttaatgaatctaaacatatat 60
||||||||| ||||||||||||||| ||||||||
Sbjct: 88 attcatatagatgttaatgaatctagacatatat 55
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 catatatgtgtctatattcattaacatctatat 86
||||||| |||||| ||||||||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatctatat 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgt 40
||||||||||| | ||||||||||||||||
Sbjct: 33 ttctagcattacctatattcatatatatgt 62
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 130 ttctagcatttcccacattcatattgatgttaatgaatctagacatatat 81
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacatatat 82
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaat 48
|||||||||| ||||||||||||| ||||||||||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 57 atatgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 113
|||||| |||| ||||||||||||| ||| |||| ||| | || |||||||||||||
Sbjct: 82 atatgtttctagattcattaacatccataaaaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct: 33 ttctagcatttctcatattcatattgatgttaatgaatctagacatatat 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 55 atatatgtgtctatattcattaacatctatataaatatg 93
|||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatg 46
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 68
||||| |||| |||| |||||||| || |||||||||||||| | ||||| ||||||
Sbjct: 130 ttctaacattttccacattcatattgatattaatgaatctaaatagatatatatgtctag 71
Query: 69 attcattaacatc 81
|||||||||||||
Sbjct: 70 attcattaacatc 58
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| ||||||| ||||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatagtgatgttaatgaatctagacatatat 82
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| |||||||| ||| |||||||||||| ||||||||
Sbjct: 107 ttctagcatttcccacattcatatttatattaatgaatctagacatatat 58
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatata 59
|||||| | ||||| |||| |||| |||||||| ||||||||||||||| |||||||
Sbjct: 120 tataagtcattctaacattttccacattcatattgatgttaatgaatctagacatata 63
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 7 gactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatcta 45
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 111 ttctagcatttcccatattcatattgatgttaatgaatcta 71
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||| |||||||| |||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||| |||||||| |||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 50.1 bits (25), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 80 tctatataaatatggacnatactagaaagtcttata 115
||||||||||||||||| || ||| |||||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttata 24
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatata 59
|||||||||| ||| |||||||| ||||||||||||||| |||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 130 ttctagcattgcctatattcatatagatgttaatgaatcta 90
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||| |||||||| |||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatcta 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 112 ttctagcatttcccatattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatat 58
|||||| | |||||||||| ||| |||||||| ||||||||||||||| ||||||
Sbjct: 121 tataagtcattctagcatttcccacattcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatcta 51
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 33 ttctagcattttctatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatata 59
||||| ||||||||||| ||| || | ||| |||||||||||||||||||||||
Sbjct: 26 taagattttctagcattgcccacatatacatagatgttaatgaatctaaacatata 81
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattcatata 35
||||||||||||||||| |||||||||||||
Sbjct: 26 taagactttctagcattgcccatattcatata 57
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 attcatatatatgttaatgaatctaaacatat 58
|||||||| ||||||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatat 38
|||||||||| |||||||||||||||||
Sbjct: 102 ttctagcattttccatattcatatatat 75
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 68
|||||||||| |||| || ||||| |||||||||||||| | | |||||| ||||||
Sbjct: 33 ttctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 69 attcattaaca 79
|||||||||||
Sbjct: 93 attcattaaca 103
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 tgtgtctatattcattaacatctatat 86
|||||||| ||||||||||||||||||
Sbjct: 68 tgtgtctaaattcattaacatctatat 94
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/78 (83%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 68
|||||||||| ||| ||||||| ||| |||||||||||| || |||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatacttatattaatgaatctagacggatatatatgtctag 92
Query: 69 attcattaacatctatat 86
|||||||| |||| ||||
Sbjct: 93 attcattagcatcaatat 110
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tccatattcatatatatgttaatgaatctaaacatatat 60
|||| |||||||| ||||||||||||||| ||||||||
Sbjct: 118 tccacattcatattgatgttaatgaatctagacatatat 80
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 14 tagcattatccatattcatatatatgttaatgaatctaaacatatat 60
||||||| ||| ||||||||| ||| ||||||||||| ||||||||
Sbjct: 101 tagcattttccgtattcatattgatgataatgaatctagacatatat 55
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 70
|||||||||| ||| |||||||| ||||||||||||||| | | || |||| | ||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagataggcatatgtccagat 92
Query: 71 tcattaacatctatataaa 89
||||||||||| |||||||
Sbjct: 93 tcattaacatcaatataaa 111
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||| | ||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 113 tataagtcattctagcatatcccacattcatattgatgttaatgaatctaaacat 59
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 taagactttctagcattatccatattc 30
||||||||||||||||| |||||||||
Sbjct: 26 taagactttctagcattgtccatattc 52
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 ttataagactttctagcattatccatattcatata 35
|||||||||||||||||||| ||| |||||||||
Sbjct: 23 ttataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaat 48
||||| |||| ||||||||||||| ||||||||||||
Sbjct: 33 ttctaacattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 62 tgtctatattcattaacatctatataaatatggacnatactagaa 106
|||||| ||| |||||||||||||| ||| ||||| || ||||||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgttaatgaatctaaac--atatatg 61
|||||| |||||| ||| ||| |||||||| || |||||||||||| || ||||||
Sbjct: 137 taagacattctagtatttcccacattcatattgatattaatgaatctagacatatatatc 78
Query: 62 tgtctatattcattaacatctatat 86
| |||| ||||||||||||| ||||
Sbjct: 77 tatctagattcattaacatcaatat 53
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||| | |||||||||| | |||||||||| |||||||||||||||
Sbjct: 127 tataagtcattctagcatttactatattcatattgatgttaatgaatcta 78
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 12 tctagcattatccatattcatatatatgttaatgaatctaaacatatatg 61
|||| |||| |||| |||||||| ||||||||||||||| | |||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatatg 52
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||| ||| |||||||| ||||||||||||||| ||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacat 78
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
|||||| | |||||||||| | |||||||||| |||||||||||||||
Sbjct: 24 tataagtcattctagcatttactatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| ||||||| ||||||||||||||| ||||||||
Sbjct: 134 ttctagcatttcccacattcatagtgatgttaatgaatctagacatatat 85
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacat 56
|||||||||| |||| |||||||| |||||| |||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgtta-tgaatctaaacat 77
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
|||||||||| ||| ||| |||| ||||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacatttatattaatgttaatgaatctagacatatat 82
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 taagactttctagcattatccatattcatatatatgtt 41
||||||||||||||||| |||||||||||| |||||
Sbjct: 87 taagactttctagcattgctcatattcatatagatgtt 50
