miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;EU532400.1/147-239 3634:Gossypium barbadense
(sea-island cotton)
Length = 93
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;ABIM01012099.1/6617-6710 3649:Carica papaya
(papaya)
Length = 94
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;AC209507.1/126147-126250 4081:Solanum
lycopersicum
Length = 104
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;AC225328.1/5014-5119 4081:Solanum lycopersicum
Length = 106
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;AC225328.1/13792-13888 4081:Solanum lycopersicum
Length = 97
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;CAAP02000793.1/41456-41548 29760:Vitis vinifera
Length = 93
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaactt 39
>RF00640;MIR167_1;CAAP02000379.1/24621-24714 29760:Vitis vinifera
Length = 94
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaacttacctata 31
|||||||||||||||||| ||||| ||||||
Sbjct: 16 aagctgccagcatgatctcaacttccctata 46
>RF00640;MIR167_1;AARH01002853.1/45908-46003 3694:Populus
trichocarpa
Length = 96
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaa 21
|||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaa 36
>RF00640;MIR167_1;AASG02005785.1/15088-15180 3988:Ricinus communis
(castor bean)
Length = 93
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaa 21
|||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaa 36
>RF00640;MIR167_1;AASG02013390.1/4624-4525 3988:Ricinus communis
(castor bean)
Length = 100
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaa 21
|||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctaaa 36
