miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;EU548281.1/284-201 3702:Arabidopsis thaliana
(thale cress)
Length = 84
Score = 95.6 bits (48), Expect = 7e-20
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacaaaagtaatctgcatat-actgcatttgcttctcttgcgtg 59
|||||||||||||||||||||| | ||| ||||||| | |||| ||||||||||||||||
Sbjct: 5 cagaagagagtgagcacacaaaggcaatttgcatatcattgcacttgcttctcttgcgtg 64
Query: 60 ctcactgctctttctg 75
||||||||||||||||
Sbjct: 65 ctcactgctctttctg 80
>RF00073;mir-156;AL391222.1/7873-7786 3702:Arabidopsis thaliana
(thale cress)
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacaaa 22
||||||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacacaaa 26
>RF00073;mir-156;ABXC01004344.1/59682-59592 4558:Sorghum bicolor
(sorghum)
Length = 91
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 gcgtgctcactgctctttctg 75
|||||||||||||||||||||
Sbjct: 67 gcgtgctcactgctctttctg 87