miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 119 bits (60), Expect = 7e-27
Identities = 90/100 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatcta 46
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgagaaatgctagaat 6
Score = 103 bits (52), Expect = 4e-22
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| ||||||||||||| ||| ||||||||| | |||||| ||||
Sbjct: 6 attctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtcta 65
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaat 105
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 7e-27
Identities = 90/100 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| ||||||||| ||| ||| ||||||||||||||||||||| |||
Sbjct: 131 attctagcatttctcacattcatattaatgttaatgaatctagacatatatatccaacta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 71 gattcattaacatccatatgaatatgggtaatgctagaat 32
Score = 71.9 bits (36), Expect = 1e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||| | ||||||||||| |||| ||| |||||||| |||||| ||||
Sbjct: 32 attctagcattacccatattcatatggatgttaatgaatctagttggatatatatgtcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||||||| || |||||| ||||||
Sbjct: 92 gattcattaacattaatatgaatgtgagaaatgctagaat 131
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 7e-27
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatctagattcattaacattaat 108
Query: 78 atgaatatgggaaatg 93
|||||| |||||||||
Sbjct: 109 atgaatgtgggaaatg 124
Score = 69.9 bits (35), Expect = 6e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||||||||| ||| ||| ||||||||| | |||||| ||||||||||
Sbjct: 125 gcatttcccacattcatattaatgttaatgaatctagatagatatatatgtctagattca 66
Query: 67 ttaacattaatatgaatatgggaaatg 93
||||||| ||||||||| |||| ||||
Sbjct: 65 ttaacatcaatatgaatgtgggtaatg 39
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 119 bits (60), Expect = 7e-27
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||||||||||||||| || ||
Sbjct: 6 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatctattta 65
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaat 105
Score = 87.7 bits (44), Expect = 2e-17
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||| | | |||||| ||||
Sbjct: 105 attctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtcta 46
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgggaaatgctagaat 6
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 115 bits (58), Expect = 1e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
|||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 125 gcatttctcacatccatattgatgctaatgaatctagacatatatatccgtctagattca 66
Query: 67 ttaacattaatatgaatatgggaaatgttagaat 100
|||| || | ||||||| ||||||||| ||||||
Sbjct: 65 ttaatataagtatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
||||| ||||||||| ||||||||| ||||||
Sbjct: 64 taacaacaatatgaatgtgggaaatgctagaat 32
Score = 73.8 bits (37), Expect = 4e-13
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || |||||||||| || ||| ||||||||| | |||||| ||||
Sbjct: 32 attctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
||||||||| ||| ||||||||| |||||||||
Sbjct: 92 gattcattaccatcaatatgaatgtgggaaatg 124
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||
Sbjct: 124 catttctcatattcatattgatgctaatgaatctaaacatatatatctatctaaattcat 65
Query: 68 taacattaatatgaatatgggaaat 92
|| ||| ||||||||||||| ||||
Sbjct: 64 tagcatcaatatgaatatggaaaat 40
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
|||||||||||||||||||| |||| |||| | |||||| | ||||||||||| |||
Sbjct: 46 catattcatattgatgctaatgaatttagatagatatatatgtttagattcattagcatc 105
Query: 75 aatatgaatatgggaaatgttagaat 100
|||||||||||| |||||||||||||
Sbjct: 106 aatatgaatatgagaaatgttagaat 131
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 4e-25
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| ||| ||| ||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 131 attctagcatttttcacatttatattgatgataatgaatctagacatatatatctatcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
||||||||||||| ||||||||| |||||||||
Sbjct: 71 gattcattaacataaatatgaatgtgggaaatg 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||||||||| ||| ||| ||||||||| | |||||| ||||||||||
Sbjct: 38 gcatttcccacattcatatttatgttaatgaatctagatagatatatatgtctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatgttagaat 100
||| ||| ||||| ||| || ||||| ||||||
Sbjct: 98 ttatcatcaatataaatgtgaaaaatgctagaat 131
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 111 bits (56), Expect = 2e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| ||||||||||||| ||| ||||||||| | | |||| |||||
Sbjct: 32 attctagcatttctcacattcatattgatggtaatgaatctagataga-atatatatcta 90
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 91 gattcattaacattaatataaatatgggaaatgttagaat 130
Score = 73.8 bits (37), Expect = 4e-13
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| |||||| ||||| ||| ||| ||||||||| |||||| || ||||||||||||
Sbjct: 123 catttcccatatttatattaatgttaatgaatctagatatatat-tctatctagattcat 65
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
|| ||| ||||||||| || |||||| ||||||
Sbjct: 64 taccatcaatatgaatgtgagaaatgctagaat 32
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| |||||||||||||||| ||| ||||||| |||||||||| |||||
Sbjct: 32 attctagcattttccatattcatattgatgttaatgaatctatacatatatatttatcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaat 131
Score = 87.7 bits (44), Expect = 2e-17
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||||| | |||||| | ||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtata 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 71 gattcattaacatcaatatgaatatggaaaatgctagaat 32
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || ||||||||||||| ||| |||| |||||||||||||| |||||||||||||
Sbjct: 123 atttcccacattcatattgatgttaatgaatgtagacatatatatctatctagattcatt 64
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
||||| ||||||||| ||||||||| ||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaat 32
Score = 87.7 bits (44), Expect = 2e-17
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||||| | |||||| ||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||||||| |||||||| |||||||
Sbjct: 92 cattcattaacatcaatatgaatgtgggaaatattagaat 131
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 3e-23
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||| ||||||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 38 gcatttcccacatttatattgatgttaatgaatctagacatatatatctatctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatgttagaat 100
|||| || ||||||||| ||||||||| ||||||
Sbjct: 98 ttaatatcaatatgaatgtgggaaatgctagaat 131
Score = 73.8 bits (37), Expect = 4e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || |||||||||||| ||| ||||||||| | |||||| ||||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
||||||||||||| ||||| ||| |||||||||
Sbjct: 71 gattcattaacatcaatataaatgtgggaaatg 39
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 16 atattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatta 75
||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||| |
Sbjct: 116 atattcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatca 57
Query: 76 atatgaatatgggaaatgttagaat 100
||| |||| ||| ||||| ||||||
Sbjct: 56 atacgaatgtggaaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||| |||||||| ||| || |||||| | |||||| ||||
Sbjct: 32 attctagcattttccacattcgtattgatgttaatgactctagatagatatatatgtcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| ||||||||||| | ||||| ||||||
Sbjct: 92 gattcattagcatcaatatgaatatagaaaatgctagaat 131
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || |||||||||||| ||| ||||||||| |||||||| |||||
Sbjct: 131 attctagcatttcccacattcatattgatattaatgaatctagatatatatatttatcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 71 gattcattaacattaatatgaatgtggaaaaagttagaat 32
Score = 77.8 bits (39), Expect = 2e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||| ||| ||| ||||||||| | |||||| ||||||||||||||| || |||
Sbjct: 49 attcatattaatgttaatgaatctagataaatatatatatctagattcattaatatcaat 108
Query: 78 atgaatatgggaaatgttagaat 100
|||||| ||||||||| ||||||
Sbjct: 109 atgaatgtgggaaatgctagaat 131
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||| ||||| ||| ||||||||||||||||||| || ||
Sbjct: 32 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||| || ||||||||| ||| ||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtggaaaatgttagaat 131
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||||||| ||| ||||||| | | |||||| ||||||||||||||||| | |
Sbjct: 114 attcatattgatattaatgaatctaaatagatatatatgtctagattcattaacatcact 55
Query: 78 atgaatatgggaaatgttagaat 100
|||||| ||||||||| ||||||
Sbjct: 54 atgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 4e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 114 attcatattaatgttaatgaatctagacatatatatctatctagattcattaacactaat 55
Query: 78 atgaatatgggaaatg 93
|||||| |||||||||
Sbjct: 54 atgaatgtgggaaatg 39
Score = 67.9 bits (34), Expect = 2e-11
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||||||||| || ||| ||||||||| | |||||| ||||||||||
Sbjct: 38 gcatttcccacattcatattagtgttaatgaatctagatagatatatatgtctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||| |||| ||||||
Sbjct: 98 ttaacattaatatgaatgtggagaatgctagaat 131
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| |||| ||||||| |||||| |||||||||||||||||| |||
Sbjct: 114 attcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaat 55
Query: 78 atgaatatgggaaatgttagaat 100
|||||||| ||||||| ||||||
Sbjct: 54 atgaatataggaaatgctagaat 32
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| ||||||||||||||| ||| ||||||||| | ||||| ||||
Sbjct: 32 attctagcatttcctatattcatattgatgttaatgaatctagatagatatagatgtcta 91
Query: 61 gattcattaacattaatatgaat 83
|||||||||||| |||||||||
Sbjct: 92 tattcattaacatcaatatgaat 114
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||
Sbjct: 114 attcatattgatgctaatgaatctagacatatatatctatctagattcattagtatcaat 55
Query: 78 atgaatatgggaaatgttagaat 100
|||||| || |||||| ||||||
Sbjct: 54 atgaatgtgagaaatgctagaat 32
Score = 95.6 bits (48), Expect = 1e-19
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| |||||||||||| |||| ||||||||| | |||||| ||||
Sbjct: 32 attctagcatttctcacattcatattgatactaatgaatctagatagatatatatgtcta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 92 gattcattagcatcaatatgaatgtggtaaatgttagaat 131
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 99.6 bits (50), Expect = 7e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| || |||
Sbjct: 113 attcatattgatgttaatgaatctagacatatatatctatctagattcattaatatcaat 54
Query: 78 atgaatatgggaaa 91
|||||| |||||||
Sbjct: 53 atgaatgtgggaaa 40
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||||||| ||| ||||||||| | |||||| ||||||||||||||||| |||
Sbjct: 48 attcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaat 107
Query: 78 atgaatatgggaaatgttagaat 100
|||||| ||| |||| |||||||
Sbjct: 108 atgaatgtggaaaatattagaat 130
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || ||| ||||||||| ||| ||||||||| ||||||||| |||||||||||||
Sbjct: 123 atttcccacattaatattgatggtaatgaatctagaaatatatatctatctagattcatt 64
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
||| | ||||||||| ||||||||| ||||||
Sbjct: 63 aacgtcaatatgaatgtgggaaatgctagaat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||| | ||| ||||||||| | |||||| ||||
Sbjct: 32 attctagcatttcccacattcatattgacgttaatgaatctagatagatatatatttcta 91
Query: 61 gattcattaacattaatatgaatatgggaaat 92
||||||||| ||| ||||| ||| ||||||||
Sbjct: 92 gattcattaccatcaatattaatgtgggaaat 123
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 32 attctagcatttctcatattcatattgatgttaatgaatctagacatatatatctatcta 91
Query: 61 gatt 64
||||
Sbjct: 92 gatt 95
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| |||||||||||| |||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgagaaatgctagaat 32
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || |||||||||| || ||| ||||||||||||||||||| |||||||||||||
Sbjct: 123 atttcccacattcatattgttgttaatgaatctagacatatatatctatctagattcatt 64
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
||||| |||||| || ||| ||||| ||||||
Sbjct: 63 aacatcaatatggatgtggaaaatgctagaat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 21 catattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatg 80
|||||||||| ||| ||||||||| | |||||| |||||||||||||||| ||||||
Sbjct: 52 catattgatgttaatgaatctagatagatatatatgtctagattcattaacaacaatatg 111
Query: 81 aatatgggaaat 92
||| ||||||||
Sbjct: 112 aatgtgggaaat 123
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 114 attcatgttgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 78 atgaatatgggaaatgttagaat 100
|||||| || |||||| ||||||
Sbjct: 54 atgaatgtgagaaatggtagaat 32
Score = 65.9 bits (33), Expect = 9e-11
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
||||||||| ||||||||||||| ||| ||||||||| | |||||| |||||||||||
Sbjct: 39 catttctcacattcatattgatgttaatgaatctagatagatatatatgtctagattcat 98
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
||| || || |||||| | | ||||| ||||||
Sbjct: 99 taatatcaacatgaatttagaaaatgctagaat 131
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| |||||||||||||||| ||| ||||||||||||||||||| || |||||| |
Sbjct: 38 gcatttcccatattcatattgatgttaatgaatctagacatatatatctatatagattta 97
Query: 67 ttaacattaatat 79
||||||| |||||
Sbjct: 98 ttaacatcaatat 110
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
||||||||||||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatg 39
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 6e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| |||||||||||||||| ||| ||||||||||||||||||| || |||||| |
Sbjct: 123 gcatttcccatattcatattgatgttaatgaatctagacatatatatctatatagattta 64
Query: 67 ttaacattaatat 79
||||||| |||||
Sbjct: 63 ttaacatcaatat 51
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
||||||||||||||||| |||||||||||||||||||
Sbjct: 86 tctagattcattaacatcaatatgaatatgggaaatg 122
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 89.7 bits (45), Expect = 6e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||| ||||| ||| ||||||||||||||||||| |||||
Sbjct: 135 attctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatcta 76
Query: 61 gattcattaacat 73
|||||||||||||
Sbjct: 75 gattcattaacat 63
Score = 63.9 bits (32), Expect = 4e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 21 catattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatg 80
|||| ||||| ||| ||||||||| | |||||| ||||||||||||||||| | ||||
Sbjct: 56 catagtgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatg 115
Query: 81 aatatgggaaatgttagaat 100
||| ||||||||| ||||||
Sbjct: 116 aatgtgggaaatgctagaat 135
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 2e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 39 catttcccacattcatattgatattaatgaatctagacatatatatctatctagattcat 98
Query: 68 taacattaatatgaat 83
||| || |||||||||
Sbjct: 99 taaaatcaatatgaat 114
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
|||| ||| |||||||||||| ||| ||||||||| | |||||| ||||||||||||
Sbjct: 123 atttttcacattcatattgattttaatgaatctagatagatatatatgtctagattcatt 64
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
|| || ||||||||| ||||||||||||||||
Sbjct: 63 aatatcaatatgaatgtgggaaatgttagaat 32
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 87.7 bits (44), Expect = 2e-17
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 49 attcatattgatgttaatgaatgtagacatatatatg--tctagattcattaacatcaat 106
Query: 78 atgaatatgggaaatgttagaat 100
|||||| ||||||||| ||||||
Sbjct: 107 atgaatgtgggaaatgctagaat 129
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 129 attctagcatttcccacattcatattgatgttaatgaatctagacatatatat--gtcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||||||| | | ||||| ||||||
Sbjct: 71 cattcattaacatcaatatgaatgtagaaaatgctagaat 32
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || |||||||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct: 123 atttcccacattcatattgatattaatgaatctagacatatatatctatctagattcatt 64
Query: 69 aacattaatat 79
||||| |||||
Sbjct: 63 aacatcaatat 53
Score = 61.9 bits (31), Expect = 1e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 atattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatga 81
||||||||| ||| ||||||||| | |||||| |||||||||||||| || |||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 82 atatgggaaat 92
|| ||||||||
Sbjct: 113 atgtgggaaat 123
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||||||| |||||||| ||||||||| ||||||||||||||||| |||
Sbjct: 49 attcatatagatgctaatgaatctaggcatatatataagtctagattcattaacatcaat 108
Query: 78 atgaatatgggaaatgttagaat 100
|||||| ||| ||||| ||||||
Sbjct: 109 atgaatgtggaaaatgctagaat 131
Score = 56.0 bits (28), Expect = 9e-08
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || ||||||||||||| ||| |||||||||| ||||||| |||
Sbjct: 131 attctagcattttccacattcatattgatgttaatgaatctagacttatatatatgccta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| |||||||| ||| |||| ||||||
Sbjct: 71 gattcattagcatctatatgaatgtggacaatgctagaat 32
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||| ||||||||| | | |||||||||||||||| || |||||||||||
Sbjct: 38 gcatttcccacatttatattgatgtttatgaatctagacatatatttctatctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatg 93
||||||| ||||| ||| |||||||||
Sbjct: 98 ttaacatcaatataaatgtgggaaatg 124
Score = 54.0 bits (27), Expect = 3e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || ||| ||||||||| ||| ||||||||| | | |||| ||||||||||
Sbjct: 125 gcatttcccacatttatattgatgttaatgaatctagatagaaatatatgtctagattca 66
Query: 67 ttaacattaatatgaatatgggaaatg 93
| ||||| ||||| ||| |||||||||
Sbjct: 65 taaacatcaatataaatgtgggaaatg 39
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 1e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 45 catatatatccatctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaa 106
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 39 catttcccacattcatattgatattaatgaatctagacatatatatctatctagattcat 98
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
|||| |||||||| || |||||| ||||||
Sbjct: 99 taactaatatatgaatgtgagaaatgctagaat 131
Score = 63.9 bits (32), Expect = 4e-10
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| |||||||| | ||| ||||||||| | |||||| ||||
Sbjct: 131 attctagcatttctcacattcatatattagttaatgaatctagatagatatatatgtcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||| || ||||||||| ||||||||| ||||||
Sbjct: 71 gattcattaatatcaatatgaatgtgggaaatgatagaat 32
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
||||||||| |||||||| |||| ||| |||||||||||| ||||| || |||||||||
Sbjct: 39 catttctcacattcatatagatgttaatgaatctagacatctatatatatttagattcat 98
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
||||| |||||||| ||||||||| ||||||
Sbjct: 99 caacatctatatgaatgtgggaaatgctagaat 131
Score = 50.1 bits (25), Expect = 5e-06
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || |||||||| |||| | | ||||||| | ||||||| ||||
Sbjct: 131 attctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
||||||||||||| |||||||| || ||||||
Sbjct: 71 gattcattaacatctatatgaatgtgagaaatg 39
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| | ||||||||||||||||| |||||||||||||| |||||
Sbjct: 125 attctagcatttcctacattcatattgatgctaatgaatctagacatat------atcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| ||||||||| ||||||||| ||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaat 32
Score = 65.9 bits (33), Expect = 9e-11
Identities = 83/100 (83%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||||||| ||||||||| |||| ||||
Sbjct: 32 attctagcatttcccacattcatattgatgctaatgaatctagatatat------gtcta 85
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| ||||||||| | ||||||| ||||||
Sbjct: 86 gattcattagcatcaatatgaatgtaggaaatgctagaat 125
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 79.8 bits (40), Expect = 6e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||| |||||| ||| |||
Sbjct: 130 attctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtg-cta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 75.8 bits (38), Expect = 9e-14
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctag-acatatatatccatct 59
||||| ||||||| || ||||||||||||| ||| |||||||| ||||| |||| | |
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagcacatacatatg--ttt 89
Query: 60 agattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 90 agattcattaacatcaatatgaatgtgggaaatgctagaat 130
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||| |||||| || ||| ||||||||||||||||||| || ||
Sbjct: 32 attctagcatttcccacatttatattggtgttaatgaatctagacatatatatctattta 91
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||| || ||||||||| || ||||| ||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgaaaaatgctagaat 131
Score = 63.9 bits (32), Expect = 4e-10
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| ||| |||||||||||| ||| ||||||| | | |||||| ||||
Sbjct: 131 attctagcatttttcacattcatattgatattaatgaatctaaatagatatatatgtcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||| ||| ||||||||| ||||||
Sbjct: 71 gattcattaacaccaatataaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||||||| ||||| || ||||||||||||||||||| |||||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatctatcta 91
Query: 61 gattcattaacattaatatg 80
||||||||| ||| ||||||
Sbjct: 92 gattcattagcatcaatatg 111
Score = 56.0 bits (28), Expect = 9e-08
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 21 catattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatg 80
|||||||||||||| ||||||||| | |||||| |||||||||||| ||| |||||
Sbjct: 111 catattgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatg 52
Query: 81 aatatgggaaatgttagaat 100
||| ||| ||||| ||||||
Sbjct: 51 aatgtggaaaatgctagaat 32
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 6e-15
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||||||| | || ||| |||||||||||| ||||| |||||
Sbjct: 131 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| |||||||| ||||||||||||||||
Sbjct: 71 gattcattaacacctatatgaatgtgggaaatgttagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||||||| | || ||| ||||||||| ||||||| |||||||||||
Sbjct: 39 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 98
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
||||| |||||||| ||| ||||| ||||||
Sbjct: 99 taacacctatatgaatgtggaaaatgctagaat 131
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 79.8 bits (40), Expect = 6e-15
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| |||||||||||||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 116 gcatttcccatattcatattgatgttaatgaatctagacat--atatctatctagattca 59
Query: 67 ttaacat 73
|||||||
Sbjct: 58 ttaacat 52
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 24 attgatgctaacgaatctagacatatatatccatctagattcattaacattaatatgaat 83
||||||| ||| ||||||||| | |||||| ||||||||||||||||| |||||||||
Sbjct: 48 attgatgttaatgaatctagatagatatatg--tctagattcattaacatcaatatgaat 105
Query: 84 atgggaaatg 93
||||||||||
Sbjct: 106 atgggaaatg 115
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 79.8 bits (40), Expect = 6e-15
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||||||| | || ||| |||||||||||| ||||| |||||
Sbjct: 2 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 61
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| |||||||| ||||||||||||||||
Sbjct: 62 gattcattaacacctatatgaatgtgggaaatgttagaat 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||||||| | || ||| ||||||||| ||||||| |||||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 35
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
||||| |||||||| ||| ||||| ||||||
Sbjct: 34 taacacctatatgaatgtggaaaatgctagaat 2
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 77.8 bits (39), Expect = 2e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 98 attctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaat 39
||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 11 attctagcatttctcacattcatattgatgctaatgaat 49
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||| ||||||||| || |||||| ||||||
Sbjct: 55 tctagattcattagcatcaatatgaatgtgagaaatgctagaat 98
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 77.8 bits (39), Expect = 2e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 50 atatccatctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||| |||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaat 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 75 aatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||
Sbjct: 57 aatatgaatatgggaaatgctagaat 32
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 2e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| ||||||||||||| |||| ||| ||||||||||| |||||| |||||
Sbjct: 130 ttctagcattgctcatattcatatagatgttaatgaatctagacacatatatatgtctag 71
Query: 62 attcattaacattaatatgaatatggg 88
|||||||||||| |||||||| ||||
Sbjct: 70 attcattaacatctatatgaatgtggg 44
Score = 75.8 bits (38), Expect = 9e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||||||||||||| ||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatatatgtgtctagattcattaacatctat 108
Query: 78 atgaatatgggaaatgttagaa 99
||||||||| | |||| |||||
Sbjct: 109 atgaatatgagcaatgctagaa 130
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 50 atatccatctagattcattaacattaatatgaatatgggaaatgttaga 98
||||| |||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 aatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||
Sbjct: 85 aatatgaatatgggaaatgctagaat 110
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||||||||||| || ||||||| | ||| ||| |||| ||||||||||||| |||||
Sbjct: 32 attctggcatttcccacattcatactcatgttaatgaatttagacatatatat--atcta 89
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| | ||||||| || ||||| ||||||
Sbjct: 90 gattcattaacatgagtatgaatgtgaaaaatgctagaat 129
Score = 60.0 bits (30), Expect = 6e-09
Identities = 78/93 (83%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| ||| ||||||| | ||| ||| ||||||||| |||||||| ||||
Sbjct: 129 attctagcatttttcacattcatactcatgttaatgaatctagatatatatatg--tcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
|||||||||||| | ||||||| |||||||||
Sbjct: 71 aattcattaacatgagtatgaatgtgggaaatg 39
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| |||||||||||||||||| | |||
Sbjct: 131 attctagcatttcccacattcatattgatgttaatgaatctagacatatatatttagcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatg 93
||| ||||| || ||||||||| ||| |||||
Sbjct: 71 aatttattaatataaatatgaatgtggaaaatg 39
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 131
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 64 atctagattcattaacatcaatatgaatgtgggaaatgttagaat 108
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaat 32
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 69 atctagattcattaacatcaatatgaatatgggaaatgctagaat 113
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| ||||||| |||||||||||||||| ||| |||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctaga 75
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| ||||||| |||||||||||||||| ||| |||||||||
Sbjct: 113 attctagcatttcccatattcatattgatgttaatgaatctaga 70
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaat 112
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagaca 46
||||| ||||||| |||||||||||||||| ||| |||||||||||
Sbjct: 112 attctagcatttcccatattcatattgatgttaatgaatctagaca 67
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 cattaatatgaatatgggaaatgttagaat 100
|||||| |||||||||||||||| ||||||
Sbjct: 61 cattaacatgaatatgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatata 50
|||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 38 gcatttctcatatttatattgatgctaatgaatctagacatata 81
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||||||| |||||||| |||| || |||||||||| | | ||
Sbjct: 131 attctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtata 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||| ||| |||||||||| | ||||||||||||
Sbjct: 71 gattcattagcatctatatgaatatagaaaatgttagaat 32
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 1e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || |||||||| || | || ||||||||||||||||||| || ||
Sbjct: 131 attctagcatttcccacattcatatggaggttagtgaatctagacatatatatctatata 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||| |||| | |||||||||| ||||||| ||||||
Sbjct: 71 gattcactaacctctatatgaatataggaaatgctagaat 32
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 1e-12
Identities = 83/100 (83%), Gaps = 9/100 (9%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| |||||||||||| ||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagacat---------tcta 82
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 83 gattcattaacatcaatatgaatgtgggaaatgctagaat 122
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaat 32
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagaca 46
||||| ||||||| |||||||||||||||| ||| |||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatgttaatgaatctagaca 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 cattaatatgaatatgggaaatgttagaat 100
|||||| |||||||||||||||| ||||||
Sbjct: 83 cattaacatgaatatgggaaatgctagaat 112
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||||||||| ||| |||||| ||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 55
Query: 78 atgaatatggg 88
|||||||||||
Sbjct: 54 atgaatatggg 44
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
||||||||||| |||| ||| ||| ||||| ||||| || |||||||||||||||||
Sbjct: 46 catattcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatc 105
Query: 75 aatatgaat 83
||||||||
Sbjct: 106 tatatgaat 114
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||||||||| ||| |||||| ||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacatctat 108
Query: 78 atgaatatggg 88
|||||||||||
Sbjct: 109 atgaatatggg 119
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
||||||||||| |||| ||| ||| ||||| ||||| || |||||||||||||||||
Sbjct: 117 catattcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatc 58
Query: 75 aatatgaat 83
||||||||
Sbjct: 57 tatatgaat 49
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaat 32
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaa 82
|||||||||||||||||| ||||||||
Sbjct: 79 atctagattcattaacatcaatatgaa 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatat 49
|||||| || ||||||||||||| ||| ||||||| ||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 2e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||| |||| |||||||| |||| ||| ||||||||||| | |||| |||||||||||
Sbjct: 38 gcattgctcacattcatatagatgttaatgaatctagacacacatatatatctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatgtta 96
||||||| || ||||| |||| |||||||
Sbjct: 98 ttaacatctatgtgaatgtgggcaatgtta 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||| || |||| ||| ||||||||| |||||| | ||||||||||||||||| ||
Sbjct: 114 attcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaacatctat 55
Query: 78 atgaat 83
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||| || |||||| |||||||||||||||||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatatat 31
Query: 78 atgaatatgggaaatgttagaa 99
|||||| |||| |||| |||||
Sbjct: 30 atgaatgtgggcaatgctagaa 9
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| ||| ||| ||||||||| |||||||| |||||||||||||||| ||
Sbjct: 25 attcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatctat 84
Query: 78 atgaatatgggaaatgttagaa 99
|||||| |||| |||| |||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||| |||||||||||| ||||||||||||| ||||||||||||
Sbjct: 76 atctacattcattaacatcaatatgaatatggaaaatgttagaat 32
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 61 atctagattcattagcattaatatgaatgtgggaaatgctagaat 105
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 82/100 (82%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| ||| ||||||||| | |||| || |
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagataggcatat--gtcca 89
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||| || ||||||||| ||||||
Sbjct: 90 gattcattaacatcaatataaacgtgggaaatgctagaat 129
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 76 atctagattcattagcattaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||||||| ||||| || |||||||||||||||||| |||||
Sbjct: 32 attctagcattttccacattcatatcgatgccaatgaatctagacatatatatttatcta 91
Query: 61 gattcatta 69
|||||||||
Sbjct: 92 gattcatta 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 21 catattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatg 80
||||| |||||||| ||||||||| | |||||| |||||||||||| ||| |||||
Sbjct: 111 catatcgatgctaatgaatctagataaatatatatgtctagattcattggcatcgatatg 52
Query: 81 aatatgggaaatgttagaat 100
||| ||| ||||| ||||||
Sbjct: 51 aatgtggaaaatgctagaat 32
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||| |||| |||||||| |||| ||| ||||||||||| | |||| ||||||||||
Sbjct: 38 gcattcctcacattcatatagatgttaatgaatctagacacacatatatttctagattca 97
Query: 67 ttaacattaatatgaatatgggaaatgttagaa 99
||||||| |||||||| |||| |||| |||||
Sbjct: 98 ttaacatctatatgaatgtgggcaatgctagaa 130
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| ||||||||| |||||| | ||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctat 55
Query: 78 atgaat 83
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 9e-11
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||| |||| |||||||| |||| ||| ||||||||||| | |||| ||||||||||
Sbjct: 125 gcattgctcacattcatatagatgttaatgaatctagacacacatatatttctagattca 66
Query: 67 ttaacattaatatgaatatgggaaatgttagaa 99
||||||| |||||||| |||| |||| |||||
Sbjct: 65 ttaacatctatatgaatgtgggcaatgctagaa 33
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| ||||||||| |||||| | ||||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatctat 108
Query: 78 atgaat 83
||||||
Sbjct: 109 atgaat 114
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatggaaaatgctagaat 118
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagac 45
||||| |||||| |||||||||||||||| ||| ||||||||||
Sbjct: 118 attctagcattttccatattcatattgatgttaatgaatctagac 74
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatata 50
||||| ||||||| || ||||||||||||| ||| |||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatata 52
||||| ||||||| || ||||||||||||| ||| |||||||||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgttaatgaatctagacatatata 83
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 13 ctcatattcatattgatgctaacgaatctagacatatatatccatctagattcattaaca 72
|||| |||||||| |||| ||| ||||||||| |||| | | |||||||||||||||||
Sbjct: 44 ctcacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaaca 103
Query: 73 ttaatatgaatatgggaaatgttagaat 100
| |||||||||| || |||| ||||||
Sbjct: 104 tctatatgaatataggcaatgctagaat 131
Score = 56.0 bits (28), Expect = 9e-08
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 16 atattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatta 75
|||||||||| |||| ||| ||||||||| ||| | || ||||||||||||||||||
Sbjct: 116 atattcatatagatgttaatgaatctagatatagacatatatctagattcattaacatcc 57
Query: 76 atatgaat 83
||||||||
Sbjct: 56 atatgaat 49
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 75 tctagattcattaacattaatataaatgtgggaaatgctagaat 32
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 62 attcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaat 121
Score = 50.1 bits (25), Expect = 5e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatat 53
||||| ||||||| || ||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 32 attctagcatttcccacatttatattaatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 16 atattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatta 75
|||||||||| |||| ||| ||||||||||||| | || ||||||||||||||||||
Sbjct: 47 atattcatatagatgttaatgaatctagacatagacatatatctagattcattaacatcc 106
Query: 76 atatgaat 83
||||||||
Sbjct: 107 atatgaat 114
Score = 56.0 bits (28), Expect = 9e-08
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 13 ctcatattcatattgatgctaacgaatctagacatatatatccatctagattcattaaca 72
|||| |||||||| |||| ||| ||||||||| |||| | | ||||||||||||||||
Sbjct: 119 ctcacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaaca 60
Query: 73 ttaatatgaatatgggaaatgttagaat 100
| |||||||||| || |||| ||||||
Sbjct: 59 tctatatgaatataggcaatgctagaat 32
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaat 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatata 50
||||||||||||| ||| |||||||||||||||
Sbjct: 95 attcatattgatgttaatgaatctagacatata 63
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttaga 98
|||||||||||||||||| ||||||||| ||| ||||||||||
Sbjct: 59 atctagattcattaacatcaatatgaatgtggaaaatgttaga 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatat 51
||||||||||||| ||| ||||||||| ||||||
Sbjct: 86 attcatattgatgttaatgaatctagatatatat 53
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 1e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| |||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 131 attctagcatttctcacattcatattgatgtcaatgaatctagacatatat 81
Score = 58.0 bits (29), Expect = 2e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 36 gaatctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgtt 95
||||||||||||| |||| |||||||||||| |||| ||||||||| || |||||| |
Sbjct: 67 gaatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgct 126
Query: 96 agaat 100
|||||
Sbjct: 127 agaat 131
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 61.9 bits (31), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||||||||||||| || | |||||||| |||||| ||||||||||||
Sbjct: 121 catttcccacattcatattgatgccaatggatctagac---tatatctatctagattcat 65
Query: 68 taacattaatatgaatatgggaaat 92
|| || ||||||||| ||||||||
Sbjct: 64 tagtatcaatatgaatgtgggaaat 40
Score = 46.1 bits (23), Expect = 8e-05
Identities = 70/85 (82%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || |||||||||||| |||| ||||||||| | ||||| ||||||| ||||
Sbjct: 40 atttcccacattcatattgatactaatgaatctagatagatata---gtctagatccatt 96
Query: 69 aacattaatatgaatatgggaaatg 93
||| ||||||||| |||||||||
Sbjct: 97 ggcatcaatatgaatgtgggaaatg 121
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| || |||||||||||||||||| ||||||||||||||||| ||
Sbjct: 90 attcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctat 31
Query: 78 atgaatatggg 88
|||||| ||||
Sbjct: 30 atgaatgtggg 20
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| ||||||||||| |||||| |||||||||||| |||| ||
Sbjct: 25 attcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatctat 84
Query: 78 atgaat 83
||||||
Sbjct: 85 atgaat 90
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||| | |||||||| |||||||||||||| ||| | |||||||||||||||| ||
Sbjct: 114 attcatttagatgctaatgaatctagacatatgtatgtgtttagattcattaacatttat 55
Query: 78 atgaatatgggaaatgttagaa 99
||| || |||| |||| |||||
Sbjct: 54 atgtatgtgggcaatgctagaa 33
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatat 53
|||||| || ||||||||||||||||| ||| ||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatat 53
|||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 54.0 bits (27), Expect = 3e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 40 ctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttag 97
|||||||||||||| |||||||| |||| ||| ||||||||| |||||||||||||
Sbjct: 61 ctagacatatatatg--tctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttag 97
||||| ||||||| ||| ||||||||| |||||||||||||
Sbjct: 41 tctagtttcattagcatcaatatgaatgtgggaaatgttag 1
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 55 catctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 77 catctagattcattaacatcaatatgaatgtgagaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||||||| ||||||||||||| ||| |||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctaga 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| || ||||| ||||||| ||||| ||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaat 119
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||||||| |||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 114 attcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatctat 55
Query: 78 atgaatatgggaaatgttagaa 99
|||| | |||| |||| |||||
Sbjct: 54 atgattgtgggcaatgctagaa 33
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||||||||| ||||||||| |||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatg 39
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||||| | ||||| ||||||
Sbjct: 75 atctagattcattaacatcaatatgaatatagtaaatgctagaat 119
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 6e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
||||||||||| |||| ||| |||||||||||||||| |||| ||||||||||||
Sbjct: 117 catattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatc 58
Query: 75 aatatgaatatggg 88
|||||||||||||
Sbjct: 57 tatatgaatatggg 44
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
||||||||||| |||| ||| |||| |||||| |||| |||||||||||||||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 75 aatatgaatatggg 88
|||||||||||||
Sbjct: 106 tatatgaatatggg 119
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 55 catctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 77 catctagattcattaacatcaatatgaatgtgagaaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||||||| ||||||||||||| ||| |||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 atctagattcattaacatcaatatgaatgtgggaaatg 112
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||||| | ||||| ||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatagtaaatgctagaat 32
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa
Japonica Group
Length = 114
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||| ||||||| | |||||||||||||||| ||
Sbjct: 90 attcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaacatatat 31
Query: 78 atgaatatgggaaatgttagaa 99
||||||||||| |||| |||||
Sbjct: 30 atgaatatgggcaatgctagaa 9
Score = 52.0 bits (26), Expect = 1e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| | ||||||||||| ||| ||| |||||||| |||| |||| ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 62 attcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||| |||||||| |||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaat 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatcta 42
||||| ||||||| || ||||||||||||| ||| |||||||
Sbjct: 103 attctagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaat 113
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 66 attaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| ||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaat 32
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatat 49
||||| ||||||| || ||||||||||||| ||| ||||||| ||||||
Sbjct: 113 attctagcatttcccacattcatattgatgttaatgaatctatacatat 65
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| | ||||||| ||||||
Sbjct: 52 atctagattcattaacatcaatatgaatgtaggaaatgctagaat 96
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatct 41
||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 108 attctagcatttctcacattcatattgatgctaatgaatct 68
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaa 34
||||| |||||||||| |||||||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatgctaa 65
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagac 45
||||| |||||||||||||||||||| ||||||||||
Sbjct: 101 atttcccatattcatattgatgctaatgaatctagac 65
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaat 92
||||||||||||| ||| ||||||||||||||||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaat 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgcta 33
|||||||||||||||||||||||||
Sbjct: 40 atttctcatattcatattgatgcta 64
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 17 tattcatattgatgctaacgaatctagacatatatat 53
|||||||||||||| ||| ||||||||||||||||||
Sbjct: 89 tattcatattgatgataatgaatctagacatatatat 53
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| || ||||||||| ||||||||| ||||||
Sbjct: 44 atctagattcattaatatcaatatgaatgtgggaaatgctagaat 88
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 44 acatatatatccatctagattcattaacattaatatgaatatgggaaat 92
||||||||||| |||||||||||||| ||| ||||| |||||| |||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaat 40
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatat 53
|||||||||||| ||||||||| ||| ||||||||| | ||||||
Sbjct: 40 atttctcatatttatattgatgataatgaatctagatagatatat 84
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 2e-08
Identities = 82/100 (82%), Gaps = 6/100 (6%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||||| || ||||||||||||| || ||||||||||| || | |||
Sbjct: 125 attctagcatttcccacattcatattgatgtcaatgaatctagacagatgt------cta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||| |||| ||||||||| ||||||||| ||||||
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaatgatagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| |||| ||||||||| ||||||||| ||||||
Sbjct: 82 tctagattcattgacatcaatatgaatgtgggaaatgctagaat 125
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacat 47
||||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 38 gcatttcccatatttatattgatgctaatgaatctagacat 78
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
||||||||||||| ||| ||||| |||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatg 39
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
|||||||| |||||||| |||||||||||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatg 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatata 52
||||||| |||||||||||||||| ||| ||||||||||| ||||
Sbjct: 103 gcatttcccatattcatattgatgttaataaatctagacatttata 58
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||||| | ||||| ||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatagaaaatgctagaat 32
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 56 atctagattcattaacatcaatatgaatgtgagaaatgctagaat 100
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||||||| ||||||||||||| ||| |||||||||
Sbjct: 100 attctagcatttctcacattcatattgatgttaatgaatctaga 57
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatat 53
|||||||| |||||||| ||||||||||||||||||
Sbjct: 94 attcatatagatgctaatgaatctagacatatatat 59
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||| ||| ||||||||||||||||| |||||||||
Sbjct: 32 attctagcatttttcacattcatattgatgctaatgaatctaga 75
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 56.0 bits (28), Expect = 9e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaat 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaat 114
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatc 40
||||| |||||||||| ||||||||||||| ||| |||||
Sbjct: 114 attctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| ||||| | ||||||||||| |||| ||| ||||||||||| | || | |||||
Sbjct: 131 attctagcattacccatattcatatagatgttaatgaatctagacacacatctatatcta 72
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||| || |||| |||| ||||||
Sbjct: 71 aattcattaacatctatatgtatgtgggcaatgctagaat 32
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 88 tctagattcattaacatctatatgaatatgggtaatgctagaat 131
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||| ||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 76 tctagtttcattaacatcaatatgaatgtgggaaatgctagaat 119
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaat 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacata 48
||||| ||||||| || ||||||||||||| ||| ||| |||||||||
Sbjct: 119 attctagcatttcccacattcatattgatgttaatgaaactagacata 72
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| |||| ||||||||| ||||||||| ||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagaca 46
||||| ||||||| || ||||||||||||| || |||||||||||
Sbjct: 32 attctagcatttcccacattcatattgatgtcaatgaatctagaca 77
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 9e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| | ||||||||| | |||| ||| |||||||||||||| ||| || |||
Sbjct: 33 ttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttag 92
Query: 62 attcattaacat 73
||||||||||||
Sbjct: 93 attcattaacat 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||| | ||||||||||| |||| |||||
Sbjct: 75 tctagattcattaacatctaaatgaatatgggcaatgctagaa 33
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaat 32
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| || ||||||||| ||||||||| ||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaat 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatata 52
||||| ||||||| || ||||||||| || ||| |||||||||||||||||
Sbjct: 108 attctagcatttcccacattcatatttatattaatgaatctagacatatata 57
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 66 tctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| ||||||| || ||||||||||||| ||| | ||||||||||||||
Sbjct: 102 attctagcatttcccacattcatattgatgttaatggatctagacatatat 52
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 66 attaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||||||| ||||||||| ||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaat 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaat 113
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 38 atctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttag 97
|||||||||||| |||| ||||| | |||||||||| |||||||| ||| ||||| |||
Sbjct: 94 atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgctag 35
Query: 98 aat 100
|||
Sbjct: 34 aat 32
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| ||||||| |||||| | | |||||||||||||||||| ||
Sbjct: 114 attcatatagatggtaatgaatctaaacatatgtctatatctagattcattaacatctat 55
Query: 78 atgaatatggg 88
||| |||||||
Sbjct: 54 atgcatatggg 44
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||||||||||| |||| |||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctat 55
Query: 78 atgaatatggg 88
|||||||||||
Sbjct: 54 atgaatatggg 44
Score = 44.1 bits (22), Expect = 3e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
||||||||||| |||| ||| |||| |||||| |||| |||||||||||||||||
Sbjct: 46 catattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatc 105
Query: 75 aatatgaatatggg 88
|||||||| ||||
Sbjct: 106 tatatgaatgtggg 119
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 62 attcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaat 32
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 3e-07
Identities = 64/76 (84%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| ||
Sbjct: 15 attcatatatatgttaatgaatctagacatatatatc----tagattcattaacatatat 70
Query: 78 atgaatatgggaaatg 93
|||||| |||| ||||
Sbjct: 71 atgaatgtgggcaatg 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgtta 96
||||||||||||||||| |||||||| |||| |||||||
Sbjct: 41 tctagattcattaacatatatatgaatgtgggcaatgtta 2
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 38 atctagacatatatatccatctagattcattaacattaatatgaatatgggaaatgttag 97
|||||||||||| |||| ||||| | |||||||||| ||||||||| ||| ||| | |||
Sbjct: 63 atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggctag 122
Query: 98 aat 100
|||
Sbjct: 123 aat 125
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatat 51
|||||||| ||||||||||||| ||| ||||||||||| ||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctagacaaatat 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaat 92
||||||||||||||||| ||||||||| || |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaat 40
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 50 atatccatctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||| |||||||||||||||||| ||||||||| || ||||| ||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaat 103
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatata 50
||||| |||||||||| ||||||||| ||| || |||||||||||||||
Sbjct: 111 attctagcatttctcacattcatatttatgtcaatgaatctagacatata 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| |||| ||||||||| || |||||| ||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaat 111
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatg 30
||||| |||||||||| |||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaat 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 63 ttcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||| ||||||||| || |||||| ||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaat 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatg 30
||||| |||||||||| |||||||||||||
Sbjct: 122 attctagcatttctcacattcatattgatg 93
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 1e-06
Identities = 77/93 (82%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||| || |||||||| | |||| ||| |||||||||||||| | | ||||||||||
Sbjct: 123 gcattgcttatattcatctagatgttaatgaatctagacatatgtgtg--tctagattca 66
Query: 67 ttaacattaatatgaatatgggaaatgttagaa 99
||||||| |||||||| |||| |||| |||||
Sbjct: 65 ttaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| || |||||||||||| |||||| ||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaat 99
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatcta 42
||||| ||||||||||||||||||||||| ||| |||||||
Sbjct: 99 attctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| ||||| || |||||||||||||||| | |||||||||||| ||| ||
Sbjct: 93 attcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcatagat 34
Query: 78 atgaatatgggaaatgttagaa 99
|||||| |||| |||| |||||
Sbjct: 33 atgaatgtgggcaatgctagaa 12
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| ||||||| |||||||| || | |||| |||||||||||| ||| ||
Sbjct: 28 attcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgcatctat 87
Query: 78 atgaatatgggaaatgttagaa 99
|||||| |||| ||||||||||
Sbjct: 88 atgaatgtgggcaatgttagaa 109
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/77 (84%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
||||||| || |||||| | |||| ||| ||||| |||||||||||| || ||||||||
Sbjct: 38 gcatttcccacattcatgtagatgttaatgaatcaagacatatatatgca--tagattca 95
Query: 67 ttaacattaatatgaat 83
||||||| ||||||||
Sbjct: 96 ttaacatctatatgaat 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctagacatatatatccatctagattca 66
|||||| ||| |||||||| |||| ||| ||||||| ||||||||| ||| ||||||
Sbjct: 123 gcatttttcacattcatatagatgttaatgaatctatgcatatatatg--tcttgattca 66
Query: 67 ttaacattaatatgaatatgggaaatg 93
||||||| | |||||| |||||||||
Sbjct: 65 ttaacatctacatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 58 ctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||||| ||||||||||| || |||| |||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaa 33
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaat 83
|||||||||||||||||| ||||||||
Sbjct: 86 tctagattcattaacatttatatgaat 112
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| |||||||||||||||| | | ||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatctat 108
Query: 78 atgaat 83
||||||
Sbjct: 109 atgaat 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| |||| ||| ||||||| ||| | |||| ||||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatctat 55
Query: 78 atgaat 83
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||| || |||||||| ||||||||||| ||||| || ||||||||||||||| ||
Sbjct: 49 attcacatagatgctaatgaatctagacacatataagtatatagattcattaacatctat 108
Query: 78 atgaat 83
||||||
Sbjct: 109 atgaat 114
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||||| ||| ||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaat 105
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 1e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||||||||| | || |||||||| ||| ||| ||||||||||||||||| | ||
Sbjct: 33 ttctggcattgcccacattcatatatatgttaataaatctagacatatatatgtgccaag 92
Query: 62 attcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||| |||||||| |||| |||| |||||
Sbjct: 93 attcattaacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatg 93
|||| ||||||||||||| ||||||||| |||||||||
Sbjct: 63 atcttgattcattaacatcaatatgaatgtgggaaatg 100
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 63 ttcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaat 32
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagaca 46
|||||||| ||||||||||||| ||| |||||||||||
Sbjct: 112 atttctcacattcatattgatgttaatgaatctagaca 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaat 92
||||||||||||||||| ||||||||| || |||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaat 112
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatat 53
||||| ||||| | || |||||||| |||| ||| ||||||||||||||||||
Sbjct: 105 attctagcattgcacacattcatatagatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||| |||| ||||||||| |||||||||
Sbjct: 41 tctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||| |||| ||||||||| |||||||||
Sbjct: 48 tctagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 gcatttctcatattcatattgatgctaacgaatctag 43
||||||| || ||||||||||||||||| ||||||||
Sbjct: 38 gcatttcccacattcatattgatgctaatgaatctag 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 58 ctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||| ||| ||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 acatatatatccatctagattcattaacattaatatg 80
|||| |||||| |||||||||||||||||| ||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatg 83
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 19 ttcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaata 78
||||||| |||| || ||||||| ||| |||||| |||||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 79 tgaatatgggaaatgttagaa 99
||||| |||| ||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaa 33
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 gcatttctcatattcatattgatgctaacgaatctag 43
||||||| || ||||||||||||||||| ||||||||
Sbjct: 110 gcatttcccacattcatattgatgctaatgaatctag 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 58 ctagattcattaacattaatatgaatatgggaaatg 93
|||||||||||| ||| ||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatg 109
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 49 tatatccatctagattcattaacattaatatgaatatgggaaatg 93
|||||| ||||||||||||||| || |||||||| |||||||||
Sbjct: 49 tatatctatctagattcattaatatcaatatgaacgtgggaaatg 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 19 ttcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaata 78
||||||||||| ||| ||||||||| | ||||| ||||||||||||||| || ||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatata---atctagattcattaatatcaata 72
Query: 79 tgaatatgggaaatg 93
|||| |||||||||
Sbjct: 73 tgaacgtgggaaatg 87
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 5e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 27 gatgctaacgaatctagacatatatatccatctagattcattaacattaatatgaatatg 86
|||| ||| |||||||||||||||||| | ||||||||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 87 ggaaatgttagaa 99
|| |||| |||||
Sbjct: 45 ggtaatgctagaa 33
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| || ||||||||| || |||||| ||||||
Sbjct: 76 atctagattcattaatatcaatatgaatgtgagaaatgctagaat 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||||||| |||||||||||| ||| |||||||||
Sbjct: 32 attctagcatttctcacattcatattgatattaatgaatctaga 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 65 cattaacattaatatgaatatgggaaatgttagaat 100
|||| |||| ||||||||||||||||||| ||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaat 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatg 30
||||| ||||||| ||||||||||||||||
Sbjct: 115 attctagcatttcccatattcatattgatg 86
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||||||| ||||||||||| | |||| |||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaa 33
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||| ||| ||||||||||||| |||| |||||
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaa 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctaga 44
|||| ||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 33 ttctagcattgctcatattcatatagatgttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctaga 44
|||| ||||| | ||||||||||| |||||||| |||||||||
Sbjct: 112 ttctagcattacccatattcatatagatgctaatgaatctaga 70
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatc 40
||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 32 attctagcatttcccacattcatattgatgctaatgaatc 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatc 40
||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 111 attctagcatttcccacattcatattgatgctaatgaatc 72
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctaga 44
||||| |||||||||||||| ||||||||| ||| ||||||||
Sbjct: 118 attctagcatttctcatatttatattgatgttaataaatctaga 75
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| ||||||| ||||| || | ||| ||||||| ||| ||| || |||||
Sbjct: 33 ttctagcattgctcatatacatatagacgttaatgaatctaaacacatacatatgtctag 92
Query: 62 attcattaacattaatatgaatatgggaaatg 93
|||||||||||| | ||||||||||| ||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatg 124
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatc 40
||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 6 attctagcatttcccacattcatattgatgctaatgaatc 45
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatc 40
||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 85 attctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| | |||||||||| ||||||||| ||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaat 103
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| ||||||| || ||||||||| | |||| ||||||||||||||||
Sbjct: 103 attctagcatttcccacattcatattagtactaatgaatctagacatatat 53
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 catattcatattgatgctaacgaatctagaca 46
||||||||||| |||| |||||||||||||||
Sbjct: 46 catattcatatagatgttaacgaatctagaca 77
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctaga 44
|||| ||||||| ||||||||||||| |||||||||
Sbjct: 40 atttttcatatttatattgatgctaatgaatctaga 75
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 56 atctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 88 atctagattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 62 attcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||| ||||||||| | ||||||| ||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaat 87
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||| ||| |||||||| |||| ||||||||||
Sbjct: 88 tctagattcattagcatctatatgaatgtgggcaatgttagaa 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacat 47
|||||||| |||||||| ||||||||||||
Sbjct: 114 attcatatagatgctaatgaatctagacat 85
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 62 tctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatg 86
||||||||||||||||||||| | ||||||
Sbjct: 75 tctagattcattaacattaatgtaaatatg 46
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 22 atattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatga 81
|||| ||| |||| |||||||||||||||| | |||||||||||| ||| ||||||
Sbjct: 53 atatagatactaatgaatctagacatatatgtgtgcctagattcattagcatatatatga 112
Query: 82 atatgggaaatgttagaa 99
|| |||| |||| |||||
Sbjct: 113 atgtgggcaatgctagaa 130
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 22 atattgatgctaacgaatctagacatatat 51
||||||||||||| ||||||||| ||||||
Sbjct: 104 atattgatgctaatgaatctagagatatat 75
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatg 30
||||| ||||||| ||||||||||||||||
Sbjct: 32 attctagcatttcccatattcatattgatg 61
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 75 aatatgaatatgggaaatgttagaat 100
||||||||||||||||||| ||||||
Sbjct: 57 aatatgaatatgggaaatgctagaat 32
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatc 54
||||| ||||||| || ||||||||||||| ||| | ||||||| | |||||||
Sbjct: 118 attctagcatttcccacattcatattgatgttaatgtatctagatagatatatc 65
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 58 ctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 63 ttcattaacattaatatgaatatgggaaat 92
||||||||||| ||||||||| ||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaat 40
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 atatccatctagattcattaacattaatat 79
||||| |||||||||||||||||| |||||
Sbjct: 53 atatctatctagattcattaacatcaatat 82
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatg 30
||||| |||||||||| |||||||||||||
Sbjct: 32 attctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaat 92
||||||||||||||| ||||||||| ||| ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaat 95
