miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AP005769.3/167010-166879 39947:Oryza sativa
Japonica Group
Length = 132
Score = 212 bits (107), Expect = 7e-55
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccggtacgtgtatgcatgtttcaaggtactatatgtgccccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccggtacgtgtatgcatgtttcaaggtactatatgtgccccca 71
Query: 61 actgttttagatccatgctgacattttccggcaagttgtccttggct 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 actgttttagatccatgctgacattttccggcaagttgtccttggct 118
>RF00645;MIR169_2;AB012243.1/43077-42837 3702:Arabidopsis thaliana
(thale cress)
Length = 241
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccggta 23
|||||||||||||||||||||||
Sbjct: 15 cagccaaggatgacttgccggta 37
>RF00645;MIR169_2;AC135313.13/45543-45452 3880:Medicago truncatula
(barrel medic)
Length = 92
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccggta 23
|||||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccggta 34
>RF00645;MIR169_2;AL392145.1/61605-61729 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccggtacgt 26
||||||||||||||||||||| ||||
Sbjct: 12 cagccaaggatgacttgccggaacgt 37
>RF00645;MIR169_2;AC157504.2/38883-38997 3880:Medicago truncatula
(barrel medic)
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccggta 23
||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggta 34
>RF00645;MIR169_2;AC157504.2/33729-33983 3880:Medicago truncatula
(barrel medic)
Length = 255
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccggta 23
||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggta 34
