miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;AC189327.2/282-159 51351:Brassica rapa subsp.
pekinensis
Length = 124
Score = 188 bits (95), Expect = 9e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctagttaactttatttctccgttgtttatccatgacaatggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 aagctgccagcatgatctagttaactttatttctccgttgtttatccatgacaatggaaa 75
Query: 61 agggataagtgtcgattagatcatgttcgtagttt 95
|||||||||||||||||||||||||||||||||||
Sbjct: 76 agggataagtgtcgattagatcatgttcgtagttt 110
>RF00640;MIR167_1;EU548950.1/213-338 3702:Arabidopsis thaliana
(thale cress)
Length = 126
Score = 52.0 bits (26), Expect = 1e-06
Identities = 80/97 (82%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctagttaactttatttctccgttgt--ttatccatgacaatgga 58
||||||||||||||||||| ||| |||| ||| ||| |||| | | |||||| ||||
Sbjct: 16 aagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatggt 75
Query: 59 aaagggataagtgtcgattagatcatgttcgtagttt 95
||| ||| ||| |||||||||||||||||| |||||
Sbjct: 76 taagagatcagtctcgattagatcatgttcgcagttt 112
