miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00885;MIR821;AL662986.3/147012-147253 39947:Oryza sativa Japonica
           Group
          Length = 242

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 32/34 (94%), Gaps = 2/34 (5%)
 Strand = Plus / Plus

                                             
Query: 28  ggcccgtcacagatgaccatcatctgtgacgggc 61
           |||||||||||||||||  |||||||||||||||
Sbjct: 74  ggcccgtcacagatgac--tcatctgtgacgggc 105




>RF00885;MIR821;AC134235.2/19664-19400 39947:Oryza sativa Japonica
           Group
          Length = 265

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 32/34 (94%), Gaps = 2/34 (5%)
 Strand = Plus / Minus

                                             
Query: 28  ggcccgtcacagatgaccatcatctgtgacgggc 61
           |||||||||||||||||  |||||||||||||||
Sbjct: 181 ggcccgtcacagatgac--tcatctgtgacgggc 150