miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 8e-40
Identities = 130/146 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| ||||||||| ||||||||| ||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| ||||||||||||||||||||| ||||||| ||||| | | ||||||||
Sbjct: 92 ctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 32 agtcttacattgtgaaacggagggag 7
Score = 125 bits (63), Expect = 2e-28
Identities = 123/143 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || ||| || ||| ||||||||||||| |||| || |||||||| | ||||| ||
Sbjct: 71 ctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaaa 130
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 131 agtcttacattgtgaaacggagg 153
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 8e-40
Identities = 130/146 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||| ||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||||||| ||||||||||||| ||||||| |||||| | | ||||||||
Sbjct: 71 ctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 131 agtcttacattatgaaacggagggag 156
Score = 149 bits (75), Expect = 1e-35
Identities = 126/143 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || |||||| ||| ||||||||||||| ||||||| ||| |||| | | ||||||
Sbjct: 92 ctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| | ||||||||||||||||||
Sbjct: 32 agacttacattatgaaacggagg 10
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 129/146 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||| |||| || |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 92 ctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || ||||| ||||||||||||||
Sbjct: 32 agtcttacatggtgaaacggagggag 7
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||| |||||| ||||||||| | ||| ||||||||||||||| |||||||||
Sbjct: 11 ctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || |||| ||| ||||||||||||| ||||||| |||||||| | | ||||||
Sbjct: 71 ttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaatactagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 129/146 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||| ||||| || |||||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||| |||| || |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 92 ctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 32 agtcttacattgtgaaacggagggag 7
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||| | ||| ||||||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || |||| ||| ||||||||||||| ||||||| ||| |||| | | ||||||
Sbjct: 71 ttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaatactagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||| ||||| ||||||||||||| ||||||| ||| || | | ||||| ||
Sbjct: 92 ctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgctaaaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagggag 7
Score = 125 bits (63), Expect = 2e-28
Identities = 123/143 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||| ||||||| | || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | |||| | | ||||||||||||| ||||||| ||| |||| | ||||||||
Sbjct: 71 ctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 131 agtcttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||| ||||| ||||||||||||| ||||||| ||| || | | ||||| ||
Sbjct: 71 ctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaaaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 131 agtcttacattatgaaacggagggag 156
Score = 133 bits (67), Expect = 7e-31
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||| ||||||||| || |||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | |||| | | ||||||||||||| ||||||| ||| |||| | ||||||||
Sbjct: 92 ctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/143 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || |||||| ||||| ||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| ||||||||||||||||||||| | ||||| || |||| | ||||||||
Sbjct: 92 ctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 32 agtcttacattgtgaaacggagg 10
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || || |||||| || |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || ||| || ||| ||||||||||| | |||| || ||| |||| | ||||||||
Sbjct: 71 ctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/143 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||||||| |||||| || | | |||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||||||||||||||||||||| |||| || ||| |||||| ||||||||
Sbjct: 92 ctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || | ||||||||||||||||
Sbjct: 32 agtcttgcattatgaaacggagg 10
Score = 83.8 bits (42), Expect = 6e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| |||| || ||||||||||||| | || |||||| ||||| |||||||||
Sbjct: 11 ctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctat 101
||| || |||||| ||| ||||||||||||| |||||
Sbjct: 71 ctaaacacatatatatgtctagattcattaacatctat 108
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 127/146 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||||||||| | |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||| ||||||||||||||||||| ||||||| ||| ||| | ||||||
Sbjct: 71 ctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 131 agtcttacattatgaaacggagggag 156
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||| ||| || |||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || | |||| ||| ||||||||||||| ||||||| ||| | | | ||||||||
Sbjct: 92 ctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 127/146 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| ||||| ||||||||||||||| || |||| | |||| | | ||||||
Sbjct: 71 ctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatactagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||| ||||| || | ||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | ||| || ||| ||||||||||||| |||| || |||||||| | ||||||||
Sbjct: 92 ctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 32 agtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 123/143 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | ||||||||| ||||||||||| | ||||| | ||| |||| | ||||||||
Sbjct: 92 ctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagg 10
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || ||||| |||||| ||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || ||||| || | ||||||||||||| ||||||| ||| ||| | ||||||||
Sbjct: 71 ctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| ||| |||| || |||||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| ||| | | ||| ||||||||| ||||||| |||||||| | | ||||||
Sbjct: 92 ctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || || ||||||||||||||||||
Sbjct: 32 agtcttatattatgaaacggagggag 7
Score = 107 bits (54), Expect = 4e-23
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||| ||| ||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 11 ctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaac 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| || ||| ||||||||||||| ||||||| ||| ||| | | ||| ||
Sbjct: 71 ctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 122/142 (85%)
Strand = Plus / Plus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| |||||||||| |||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcgttgcccacatttatatagatactaatgaatctag 74
Query: 68 gcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatc 127
||||||| |||| ||||||||||| | | ||||| ||| |||| | ||||||||| ||
Sbjct: 75 acatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtc 134
Query: 128 ctacattatgaaacggagggag 149
|||||||||||||||||||||
Sbjct: 135 ttacattatgaaacggagggag 156
Score = 117 bits (59), Expect = 4e-26
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || ||||||||| || ||||||||
Sbjct: 152 ctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||||||| | |||| ||| ||||||||||| ||||||||||| |||| | |||||||
Sbjct: 92 ctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||| ||||
Sbjct: 32 agtcttacattatgaaacagagg 10
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||||| || || ||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||| || ||||| ||||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 71 ttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagggag 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | ||||||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | || | | | || |||||||||| ||||||| || |||| | ||||||||
Sbjct: 92 ctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| ||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagg 10
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| ||||||||
Sbjct: 152 ctccgtttcatattataagactttctagcattgcccacattcatatagatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||||||| ||| ||||||||| ||||||| | | |||| | ||||||||
Sbjct: 92 ctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || || | ||||||||||||||||
Sbjct: 32 agtcttataatatgaaacggagggag 7
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || | |||||||||| ||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaac 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || |||||| ||| ||||||||||| | ||||||| ||| |||| | ||||||||
Sbjct: 71 ctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| || || | |||||||||||||
Sbjct: 131 agtcttataatatgaaacggagg 153
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||| | || |||||| ||| | |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| | ||| | ||||||||||||||| ||||||| |||||| | ||||||||
Sbjct: 71 ctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
Score = 117 bits (59), Expect = 4e-26
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| | ||| ||||||||||||| ||| || ||| |||||| ||||||||
Sbjct: 92 ctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 32 agtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| || |||||| || ||||| |||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||| ||||| ||||||||||||| ||||||| ||| || | | |||||| |
Sbjct: 92 ctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctagga 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 32 agtcttacattgtgaaacggagggag 7
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||| |||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | |||| | | ||||||||||||| ||||| | ||| |||| | || || ||
Sbjct: 71 ctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| ||| |||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| ||| | | ||| ||||||||| ||||||| |||||||| | | ||||||
Sbjct: 71 ctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || || ||||||||||||||||||
Sbjct: 131 agtcttatattatgaaacggagggag 156
Score = 107 bits (54), Expect = 4e-23
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||| ||| ||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 152 ctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaac 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||| || ||| ||||||||||||| ||||||| ||| ||| | | ||| ||
Sbjct: 92 ctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 32 agtcttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 150 ctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgttaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||| ||||| ||||||||||||| ||||||| ||| |||| | ||||||||
Sbjct: 90 ctag--acatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| | ||||||||||||||||||
Sbjct: 32 agacttacattatgaaacggagg 10
Score = 109 bits (55), Expect = 1e-23
Identities = 124/146 (84%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | ||| ||| ||||||||||||| |||| || ||||| | | ||||| ||
Sbjct: 71 ctagacacacata--tgtctagattcattaacatctagatgaatataagcaatgctacaa 128
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 129 agtcttacattatgaaacggagggag 154
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||||| ||||| |||| ||||||||||||| | ||||| ||| ||| | ||||||||
Sbjct: 71 ctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaatgctagaa 128
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 129 agtcttacattatgaaacggagg 151
Score = 93.7 bits (47), Expect = 6e-19
Identities = 122/146 (83%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||||||||| || ||||||||| || |||||||||
Sbjct: 150 ctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || ||| | ||||||||||||| || |||| ||||| || | ||||||||
Sbjct: 90 ctagacacgcata--tacctagattcattaacatcaatatgaatataggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| ||||| ||||||||| || |||||||||||||| ||||||||||
Sbjct: 148 gtttcataatgtaagactttttagcattgcccacattcatatagatatcaatgaatctaa 89
Query: 68 gcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatc 127
||||||| ||||| ||||||||||||| | ||||| ||| |||| | |||||||| ||
Sbjct: 88 acatatatgtgtgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtc 29
Query: 128 ctacattatgaaacggagg 146
||||||||||||| ||||
Sbjct: 28 ttacattatgaaaccgagg 10
Score = 107 bits (54), Expect = 4e-23
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| |||||||||| |||| || ||||||||| || |||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagccttgcccacattcatatatatgttaatgaatctag 74
Query: 68 gcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatc 127
|| | |||| |||||||||||||| | ||||||| ||| |||| | ||||| ||| ||
Sbjct: 75 acacacatatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtc 134
Query: 128 ctacattatgaaacggagggag 149
||||||||||||| |||||||
Sbjct: 135 ttacattatgaaaccgagggag 156
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 113 bits (57), Expect = 7e-25
Identities = 126/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat--taatga 61
|||||||||||||||||| ||||| ||||||||| || || |||||| |||| ||||||
Sbjct: 154 ctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgttaatga 95
Query: 62 atctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctag 121
||||| || ||| || ||||||||||||||||| |||| || ||| |||||| ||||||
Sbjct: 94 atctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaatgctag 35
Query: 122 aaaatcctacattatgaaacggagggag 149
||| || |||||| |||||| |||||||
Sbjct: 34 aaagtcttacattgtgaaacagagggag 7
Score = 105 bits (53), Expect = 2e-22
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||||||||||| ||||||||||||| | || |||||| ||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatctaa 74
Query: 68 gcatatatatgtgtttagattcattaacttctatata 104
||||| ||||||||||||||||||||| | ||||||
Sbjct: 75 acatatgtatgtgtttagattcattaacatatatata 111
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||||||| |||||| || |||||||||||| ||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| ||| | | |||||| |||| | ||||||| ||| |||||| ||||| ||
Sbjct: 92 ctagacattattatatatatagatttattagcatctatatgaatgtgggtaatgctataa 33
Query: 124 aatcctacattatgaaacggagg 146
| || ||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagg 10
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||| ||||||| | || |||||||||||| |||| |||
Sbjct: 11 ctccgtttcataatgtaagactttatagcattacccacattcatatagatgctaataaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| ||| ||||||||||| | ||||||| ||| |||| | || |||||
Sbjct: 71 ctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatgttagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 109 bits (55), Expect = 1e-23
Identities = 125/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 153 ctccgtttcagattataagactttctagcattgcccacattcatatagatgttaatgaat 94
Query: 64 ctaggcatatatatgtgtttagattca-ttaacttctatataaatatgggtagtgctaga 122
|||| |||| || |||| |||||| | ||||| ||||||| ||| |||||| |||||||
Sbjct: 93 ctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctaga 34
Query: 123 aaatcctacattatgaaacggagggag 149
|| || || | ||||||||||||||||
Sbjct: 33 aagtcttataatatgaaacggagggag 7
Score = 69.9 bits (35), Expect = 9e-12
Identities = 120/147 (81%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaa-tgaa 62
|||||||||| | | ||| ||||||||||||| | || |||||||||||| |||| | ||
Sbjct: 11 ctccgtttcatattataagactttctagcattacccacattcatatagatgttaaattaa 70
Query: 63 tctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctaga 122
||||| || || || | | ||||||||||||| ||||||| ||| |||| | |||||||
Sbjct: 71 tctagacacctacatatatctagattcattaacatctatatgaatgtgggcaatgctaga 130
Query: 123 aaatcctacattatgaaacggagggag 149
|| || || | | ||||||||||||||
Sbjct: 131 aagtcttataatctgaaacggagggag 157
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 124/146 (84%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| |||||||| || ||| || |||||||||||||||
Sbjct: 150 ctccgtttcacaatgtaagactttttagcattgtccacatttatttagatattaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||| ||||| | ||||||||||||| ||||||| || ||| | || |||||
Sbjct: 90 ctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatggtagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagggag 7
Score = 63.9 bits (32), Expect = 6e-10
Identities = 116/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||| ||||| || || |||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctaccattgtccacat--atatagatgttaatgaat 68
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | ||| || | | |||||||||||| |||| |||||| ||| | ||||| ||
Sbjct: 69 ctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatgctaaaa 128
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 129 agtcttacattgtgaaacggagg 151
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || || ||| ||||| ||||| |||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||| || ||||||||||||||||| |||| || ||| |||| | ||| ||
Sbjct: 92 ctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaatactataa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 32 agtcttacattgtgaaacggagg 10
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| ||| ||| | |||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| ||| ||| |||||| |||||| |||| || || |||| | ||||||||
Sbjct: 71 ctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||| ||||||||||||||
Sbjct: 131 agtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 109 bits (55), Expect = 1e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 18 gtaatactttctagcattgcacatattcatatagatattaatgaatctaggcatatatat 77
|||| |||||||||||| |||| |||||||||||| | ||||||||||| |||||||||
Sbjct: 114 gtaagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatat 55
Query: 78 gtgtttagattcattaacttctatataaatatgggtagtgctagaaa 124
|||| ||||||||||||| ||||||| ||| ||||| |||||||||
Sbjct: 54 gtgtctagattcattaacatctatatgaatgtgggtgatgctagaaa 8
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 18 gtaatactttctagcattgcacatattcatatagatattaatgaatctaggcatatatat 77
|||| |||||||||||| | || |||||||||||| ||||||||||||| || ||||||
Sbjct: 1 gtaagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Query: 78 gtgtttagattcattaacttctatataaatatgggtagtgctagaaa 124
||| |||||||||| || ||||||| ||| || || |||||||||
Sbjct: 61 atgtctagattcatttacatctatatgaatgtgtgtgatgctagaaa 107
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| |||||||| |||||| || ||||||||| || | |||||||
Sbjct: 11 ctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||||||||||||||||||||| || ||||||| || |||| | | ||||||
Sbjct: 71 ctagacatatatatgtgtttagattcattgacatctatatgaagatggacaattctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| || || | ||||||||||||||||
Sbjct: 131 agtcttataatatgaaacggagggag 156
Score = 69.9 bits (35), Expect = 9e-12
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||| |||| ||| ||||||||||| | |||||||
Sbjct: 152 ctccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || |||||| ||| |||||||||| || | ||||| ||| |||| | || |||||
Sbjct: 92 ctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatgttagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || || | |||||||||||||
Sbjct: 32 agtcttataatatgaaacggagg 10
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 107 bits (54), Expect = 4e-23
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| |||||||||||| || |||||||||||||||||| |||| ||
Sbjct: 6 actttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcc 65
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 107 bits (54), Expect = 4e-23
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| || |||||||||||| ||||||||||||||||||||| | ||
Sbjct: 109 actttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcc 50
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| | ||||| |||||||| | |||||||||
Sbjct: 49 tagattcattaacatatatatgaatatgggcaatgctagaaa 8
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 105 bits (53), Expect = 2e-22
Identities = 125/148 (84%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatata--tatgtgtttagattcattaacttctatataaatatgggtagtgctag 121
||| ||||| | ||||| ||||||||||||| ||||||| ||| |||| | ||||||
Sbjct: 71 ctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatgctag 130
Query: 122 aaaatcctacattatgaaacggagggag 149
||| || || | ||||||||||||||||
Sbjct: 131 aaagtcttataatatgaaacggagggag 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/145 (82%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 154 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 95
Query: 64 c--taggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctag 121
| || || | |||| | | ||||||||||||| ||||||| ||| |||| | ||||||
Sbjct: 94 ctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaatgctag 35
Query: 122 aaaatcctacattatgaaacggagg 146
||| || || | |||||||||||||
Sbjct: 34 aaagtcttataatatgaaacggagg 10
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 105 bits (53), Expect = 2e-22
Identities = 123/146 (84%), Gaps = 4/146 (2%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||| |||| |||| || |||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||||||||||||||| ||| ||| || |||||||||||| ||
Sbjct: 71 ctag----acatatgtatttagattcattaacatctttatgtatgtgggtagtgctaaaa 126
Query: 124 aatcctacattatgaaacggagggag 149
| || || ||| ||||||||||||||
Sbjct: 127 agtcttatattgtgaaacggagggag 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 114/143 (79%), Gaps = 4/143 (2%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| ||||| ||||| | | || || |||| |||| |||||||||
Sbjct: 148 ctccgtttcacaatataagactttttagcactacccacatacataaagatgttaatgaat 89
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|| | ||| || ||| ||||||||||||| |||| || ||| |||| | |||| ||
Sbjct: 88 ct----aaatacatatgtctagattcattaacatctaaatgaatgtgggcaacgctacaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 32 agtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||| ||| || ||||||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 71 cta-gcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaa 129
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 130 tgacttacattgtgaaacggagggag 155
Score = 85.7 bits (43), Expect = 2e-16
Identities = 119/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 151 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 92
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| |||||| ||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 91 ctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 32 tgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||||| || || |||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||| || ||||| ||||||||||||| ||||||| ||| | |||| ||||||||
Sbjct: 92 ttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagggag 7
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/143 (81%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | | |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || | || | | | || |||||||||| |||||||| || |||| | ||||||||
Sbjct: 71 ctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| ||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||||||||| | ||||||||||| || |||||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||||||||||||| || ||||||||||||| || |||| ||| ||| | ||||||||
Sbjct: 71 ctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | ||||||| || ||||||||||| | ||||||| ||| ||| | ||||||||
Sbjct: 92 ctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 32 tgacatacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| ||||||||||||| || |||| ||||||| | ||||||||
Sbjct: 92 ctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||||||| | | ||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 71 ctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 131 tgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||| ||| || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||| | | ||| ||||||||||||| ||||||| ||||| || | ||||||||
Sbjct: 92 ctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagggag 7
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||||| |||||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||| | || | | ||||||||||||| || |||| ||| || | | ||||||||
Sbjct: 71 ctagacatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| ||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| || ||||||||| || ||||||||||||| |||||||||||
Sbjct: 6 actttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcc 65
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| || |||||||||||| |||||||||||||||| |||||| | |
Sbjct: 109 actttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatc 50
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| | ||||| ||| |||| | |||||||||
Sbjct: 49 tagattcattaacatatatatgaatgtgggcaatgctagaaa 8
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| || |||||| ||| | || |||||||| |||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaac 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 46 atatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctatataa 105
|||| ||| ||||||||||||| | |||||| ||| |||||||||||| || |||| |
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 106 atatgggtagtgctagaaaatcctacattatgaaacggagggag 149
|| |||| | | |||||| || |||||| ||||||||||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||| ||||||||| ||||| || ||||| | |||||| ||||| |||||||||
Sbjct: 11 ctccgttttacaatgtaagactttttaatattgcctacattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| || |||||||||||||||||| ||||||| || || | | ||||||||
Sbjct: 71 atagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| || |||||| |||||||||||
Sbjct: 131 agtcttacattgtgaaacggagg 153
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || || ||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaat 93
Query: 64 cta 66
|||
Sbjct: 92 cta 90
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| | || |||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||| | | |||||||||||||| ||||| ||| || | | ||||||||
Sbjct: 71 ctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 131 tgacttacattgtgaaacggagg 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||||||||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| |||||||||||| || |||| ||| |||| | || |||||
Sbjct: 92 ctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| || |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||| ||||||||||||| || |||| |||||||||| ||||||||
Sbjct: 92 ctagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 32 tgacttacattgtgaaacggagg 10
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||||| ||| ||||||||||||| | |||| ||| || | | ||||||||
Sbjct: 71 ctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | || |||||||| || ||| |||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||| | | |||||||| |||| ||||||| ||||| || | ||||||||
Sbjct: 92 ctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagggag 7
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | ||||||||||||| ||| |||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| |||||||| |||| || |||| ||| |||| | ||||||||
Sbjct: 71 ctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagggag 156
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | ||||||| || | ||||| ||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| | || ||||||||||||||| | ||||||| ||| |||| | ||||| ||
Sbjct: 71 ctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgctaaaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagggag 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | || ||||||||| || |||||||||||| ||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||| | | | | ||||||||||||| ||||||| ||||||||| |||||||
Sbjct: 92 ctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| ||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||| ||| || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||| | | | | ||||||||||||| ||||||| ||||| || | ||||||||
Sbjct: 71 ctagatatatgtctatatctagattcattaacatctatatgaatataggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 131 tgacttacattatgaaacggagggag 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||||| |||||||||||||| |||||||||
Sbjct: 152 ctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| | || | | ||||||||||||| || |||| ||| || | | ||||||||
Sbjct: 92 ctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| ||||||||||||||||||
Sbjct: 32 tgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || |||||||||||| ||||| |||
Sbjct: 128 ctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaat 69
Query: 64 ctaggcatat 73
|||| |||||
Sbjct: 68 ctagacatat 59
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 69 catatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcc 128
|||||| || ||| |||||| |||||| ||||||| ||| |||| | ||||||||| ||
Sbjct: 52 catatagatatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtct 111
Query: 129 tacattatgaaacggagg 146
|||||| |||||||||||
Sbjct: 112 tacattgtgaaacggagg 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||| | ||||| |||||||||||||| || ||||||||||||||
Sbjct: 11 ctccgtttcatattgtaagactttctagcattgttcacattcatatagatat 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
||||||||| || |||| ||||||||||||||||
Sbjct: 40 tgctagaaagtcttacaatatgaaacggagggag 7
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||| ||||| | || || |||| | || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| ||||| | ||||||||||| ||| ||||||| ||| |||| | ||||||||
Sbjct: 71 ctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||||||| || ||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatat 103
||| ||||||| ||| ||||||||||||| |||||||
Sbjct: 92 ctaaatatatatagatgtctagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/146 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||| |||| ||| ||| ||||||||||||||| || |||| |||||| | |||||||
Sbjct: 152 ctccgcttcataatataagactttctagcattgcccacgttcacatagatgtcaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || || || |||| ||||| ||||||| ||||||| ||| | ||||||||||
Sbjct: 92 ctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 32 agtcttacattatgaaacggagggag 7
Score = 69.9 bits (35), Expect = 9e-12
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||| || | |||||||||||| |||||| ||
Sbjct: 11 ctccgtttcataatgtaagactttctagcactgtttacattcatatagatgttaatggat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| || || |||||| |||||||||| || ||||| | || |||| | ||||||||
Sbjct: 71 ctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatgctagaa 130
Query: 124 aatcctacattatgaaacggagg 146
| || || |||||||| ||||||
Sbjct: 131 agtcttatattatgaagcggagg 153
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||| ||||||||||| | |||||||||| | || |||||||| |||||||||||||
Sbjct: 152 ctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatggg 112
|||| | |||||| ||| ||||||||||||| || |||||||| ||||
Sbjct: 92 ctagatagatatatatgtctagattcattaacatcaatataaatgtggg 44
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || | ||||| | || ||| |||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||||||||| | | |||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 71 ctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||| ||||||||||
Sbjct: 131 tgacttacattgtgatacggagggag 156
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||| || |||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtg 80
|||| ||||||||||||
Sbjct: 71 ctagacatatatatgtg 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 72 atatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctac 131
|||||| ||| ||||||||||||| |||| || ||| ||| || ||||||||| || |||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 132 attatgaaacggagg 146
||| |||||||||||
Sbjct: 24 attgtgaaacggagg 10
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||| |||||| | ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaat 107
|||| ||||||||| | | |||||| |||||| || ||||||||
Sbjct: 71 ctagacatatatatctatatagatttattaacatcaatataaat 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 119/146 (81%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||| ||| |||| ||| ||||| |||
Sbjct: 150 ctccgtttcacaatgtaagtcattctagcatttcac--atttatattgatgttaataaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| ||||||||||||| || |||| |||||||| | |||| |||
Sbjct: 92 ctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/146 (81%), Gaps = 11/146 (7%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || ||||||||||||| ||||||| || |||| | ||||||||
Sbjct: 71 ctagaca-----------ctagattcattaacatctatatgtatgtgggcaatgctagaa 119
Query: 124 aatcctacattatgaaacggagggag 149
| || |||||||||||||||||||||
Sbjct: 120 agtcttacattatgaaacggagggag 145
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || || ||||||||| |||||||||
Sbjct: 141 ctccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaat 82
Query: 64 ctag 67
||||
Sbjct: 81 ctag 78
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||| |||||| | ||||||||||| ||| |||||||||
Sbjct: 150 ctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaat 107
|||| ||||||||| | | |||||| |||||| || ||||||||
Sbjct: 90 ctagacatatatatctatatagatttattaacatcaatataaat 47
Score = 69.9 bits (35), Expect = 9e-12
Identities = 119/146 (81%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||| ||| |||| ||| ||||| |||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcac--atttatattgatgttaataaat 68
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| ||||||||||||| || |||| |||||||| | |||| |||
Sbjct: 69 ctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaa 128
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 129 tgacttacattgtgaaacggagggag 154
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatata 74
|||| ||||||
Sbjct: 71 ctagacatata 81
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||| ||| |||| | ||||||||| | ||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 143 gagg 146
||||
Sbjct: 13 gagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgc 37
|||||||||| ||||||| |||||||||||||||
Sbjct: 116 ctccgtttcataatgtaagactttctagcattgc 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
||||||||| || |||||||||||||||||||||
Sbjct: 87 tgctagaaagtcttacattatgaaacggagggag 120
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||| ||||| ||||||| | ||||||||||||||| |||||||||||| |||||||||
Sbjct: 126 ctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaat 67
Query: 64 ctaggcatatatatg 78
|||| ||||||||||
Sbjct: 66 ctagacatatatatg 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 99 tatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||| ||||| |||| |||||||| | |||||||||||||||||||||
Sbjct: 57 tatatgaatataggtaatgctagaatgacttacattatgaaacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 72 atatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctac 131
|||||| ||| ||||||||||||| ||||||| ||| || | | |||||||| | |||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 132 attatgaaacggagg 146
||||||||| |||||
Sbjct: 113 attatgaaatggagg 127
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| | || |||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaa 94
|||| ||||||||| | | ||||||||||||
Sbjct: 71 ctagacatatatatctatctagattcattaa 101
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||| ||| || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| |||||||||||| || |||| ||| |||| | || |||||
Sbjct: 92 ctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaa 94
|||| ||||||||| | ||||||||||||||
Sbjct: 71 ctagacatatatatctatttagattcattaa 101
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| || |||||||| |||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| ||||||||||||| || ||| ||| |||| | ||||||||
Sbjct: 92 ctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 134 ctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaat 75
Query: 64 cta 66
|||
Sbjct: 74 cta 72
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 76 atgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacatta 135
|||||| ||||||||||||| ||||||| ||| |||| | ||||||||| || |||||||
Sbjct: 65 atgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatta 124
Query: 136 tgaaacggagggag 149
||||||||||||||
Sbjct: 125 tgaaacggagggag 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatg 60
||||||||| ||||||| ||||||||||||||| | |||||||||||| ||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg 67
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 89 cattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacgga 144
||||||| ||||||| ||| | || | ||||||||| || ||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 3 tctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaa 62
||||||||||| ||||||| |||||||||||||| |||||| |||||||| ||||||||
Sbjct: 132 tctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaa 73
Query: 63 tctaggcata 72
||||| ||||
Sbjct: 72 tctagacata 63
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||||||||||| | ||||||||| || ||||||||||||||
Sbjct: 69 tagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacg 128
Query: 143 gag 145
|||
Sbjct: 129 gag 131
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 tttctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
||||||||||||| ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 8 tttctccgtttcataatgtaagactttctagcattgcccacatttatatagat 60
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 92 taacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
|||| ||||||||||| |||| | ||||||||| || |||||||||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
|||||||||||||| || ||||||||| || ||||||||||||| ||| ||| ||||
Sbjct: 6 actttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcc 65
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaaa 107
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| || |||||||||||| |||||||||||||||| | ||| |||
Sbjct: 109 actttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtc 50
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
||||||||||||| | ||||| ||| ||| | |||||||||
Sbjct: 49 tagattcattaacatatatatgaatgtggacaatgctagaaa 8
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 120/146 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| ||| | || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||||||||| | | ||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 92 gtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
Score = 73.8 bits (37), Expect = 6e-13
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatggg 112
|||| | |||||| ||| || |||||||||| || |||| ||| ||||
Sbjct: 71 ctagatagatatatatgtctacattcattaacatcaatatgaatgtggg 119
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 83.8 bits (42), Expect = 6e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
|||||||||| | || |||||||| ||| ||||||||||||| ||||||||| | |||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 66
Query: 86 attcattaacttctatataaatatgggtagtgctagaa 123
|||||||||| || |||| ||| |||| | ||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 60.0 bits (30), Expect = 9e-09
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
|||||||||| | || |||||||| ||| |||||||||||| | |||||| ||| |||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctag 45
Query: 86 attcattaacttctatataaatatgggtagtgctagaa 123
|||||||||| || |||| ||| |||| | ||||||||
Sbjct: 44 attcattaacatcaatatgaatgtgggaaatgctagaa 7
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 tttctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
||||||||||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 8 tttctccgtttcataatgtaagactttctagcattgcccatattcatatagat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
||||||| |||||||| | ||||||||| || |||||||||||||||||
Sbjct: 59 tctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagca 33
|||||||||||||||||| |||||||||||
Sbjct: 92 ctccgtttcacaatgtaagactttctagca 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
||||||||| || |||||| ||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggag 96
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || |||||||| |||||||||||||
Sbjct: 152 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| |||||||| | | |||||||||||||
Sbjct: 92 ctagatatatatatttatctagattcattaac 61
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
||||||||||||||||| ||||||||||||||| || |||||||| |||| ||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 65 taggcata 72
||| ||||
Sbjct: 59 tagacata 52
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaat 70
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||| || |||||||||| ||||||| ||| |||| | ||||||||| || ||||||||
Sbjct: 79 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 20
Query: 137 gaaacggagggag 149
|||||||||||||
Sbjct: 19 gaaacggagggag 7
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||| ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 136 ctccgtttcataatgtaagactttctagcattgcccacattcatatagat 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||||| ||| |||| | ||||||||| || |||||||||||||||||||||
Sbjct: 88 tctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggag 140
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||||||||||||| || |||||||||||| ||||| |||
Sbjct: 134 ctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaat 75
Query: 64 ctag 67
||||
Sbjct: 74 ctag 71
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttttagcattatccatattcatatagat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||| |||||| |||||| ||||||| ||| ||| | ||||||||| || |||||| |
Sbjct: 66 tgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgt 125
Query: 137 gaaacggagggag 149
|||||||||||||
Sbjct: 126 gaaacggagggag 138
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||||| ||||||| || ||||| ||| || |||||| ||||||||||||||
Sbjct: 59 tctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggag 7
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| |||||||||| |||| || ||||||||||||||||||||||
Sbjct: 104 gtttcacaatgtaagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||| ||||||| ||||| ||||||| ||||||| || ||||||||| || ||||||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 137 gaaacggaggga 148
||||||||||||
Sbjct: 19 gaaacggaggga 8
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||||||| ||| |||||||||
Sbjct: 156 ctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaat 97
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 96 ctagacatatatatctatctagattcattaac 65
Score = 73.8 bits (37), Expect = 6e-13
Identities = 122/150 (81%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatata----gatattaat 59
|||||||||||||||||| | |||||||||| | |||||||||| | ||| |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgttaat 70
Query: 60 gaatctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgct 119
|||||||| | |||||| ||| ||||||||||||| || ||| ||| |||| | ||||
Sbjct: 71 gaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgct 130
Query: 120 agaaaatcctacattatgaaacggagggag 149
|||| | |||||| ||||||||||||||
Sbjct: 131 agaatgacttacattgtgaaacggagggag 160
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 71 ctagacatatatatctatctagattcattaac 102
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | || ||||||| | || |||||||| || |||||||||
Sbjct: 152 ctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| ||||||||||||| || |||| ||| |||||| ||||| ||
Sbjct: 92 ctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/143 (82%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||| ||||| || |||| |||||||| ||||||||
Sbjct: 150 ctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| || ||||| ||| |||||||||||| ||||||| ||| |||| | ||||||||
Sbjct: 90 ctagccacatata--tgtccagattcattaacatctatatgaatgtgggcaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| || |||||||||||||||
Sbjct: 32 tgacttatattatgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||| ||| | |||||||||||| || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaat 70
Query: 64 ctaggcatatat 75
|| | |||||||
Sbjct: 71 ctggacatatat 82
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||| | ||||||| |||||||||| ||||||||| || || |||||||||||
Sbjct: 72 tagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacg 131
Query: 143 gagggag 149
|||||||
Sbjct: 132 gagggag 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 24 ctttctagcattgcacatattcatatagatattaatgaatctag 67
|||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 31 ctttctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||| ||| ||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 134 ctccgtttcataatataagactttctagcattacccatattcatatagatgctaatgaat 75
Query: 64 ctag 67
||||
Sbjct: 74 ctag 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||| |||||| | | ||||||||| | || ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaaca 14
Query: 143 gagg 146
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 79 tgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatga 138
||||||||||||||||| ||||| || || |||| | |||||||||||| |||||| |||
Sbjct: 77 tgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtga 18
Query: 139 aacggagggag 149
|||||||||||
Sbjct: 17 aacggagggag 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||||||||||| || || | |||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgttaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
||||||| |||||| ||| ||||||||||||| | || |||||| |||||
Sbjct: 132 ctccgttccacaatataagactttctagcattactcacattcatttagat 83
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||| |||| | | |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaa 94
|||| ||||||||| | ||||||||||||||
Sbjct: 71 ctagacatatatatctatttagattcattaa 101
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||| |||||| ||| | |||||||||| || |||||||| |||||||||||||
Sbjct: 152 ctccgttccacaatataagtcattctagcatttttcacattcatattgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| ||||||||||||| | |||||||| |||| | ||||||||
Sbjct: 92 ctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| |||||||||||||| || |||||||||||| |||||||||||||
Sbjct: 122 gtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Query: 68 gcatatatatg 78
||| ||||||
Sbjct: 62 acatctatatg 52
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||| ||| ||| | ||||||||| || |||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 143 gagggag 149
|||||||
Sbjct: 124 gagggag 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||| ||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 11 ctccttttcataatgtaagactttctagcattgtccacattcatatagat 60
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||||||| ||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatat 109
|| |||||||||| || ||||||||||| | ||||||| |||||
Sbjct: 92 ttaaacatatatatgcgtatagattcattagcatctatatgaatat 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| |||||||||||||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| |||||| |||||||| | ||||||| ||| ||| | ||||||||
Sbjct: 71 ctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| |||| ||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaacgaat 70
Query: 64 ctaggcatatatat 77
||||||||| ||||
Sbjct: 71 ctaggcatacatat 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||| ||||| ||||||| ||| |||| | ||||||||| || || | |||||||||
Sbjct: 73 tagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 143 gagg 146
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 93
Query: 64 ctaggcatatatat 77
|||| |||||||||
Sbjct: 92 ctagacatatatat 79
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| || |||||||| |||||||| |||
Sbjct: 11 ctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| | |||||| ||| ||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 71 ttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||||| | |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| ||| ||||| | | ||||||||||||| |||||| ||| |||| | || |||||
Sbjct: 92 ctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaa 33
Query: 124 aatcctacattatgaaacggagggag 149
| ||||||||| |||||| ||||
Sbjct: 32 tgacttacattatggaacggaaggag 7
Score = 65.9 bits (33), Expect = 1e-10
Identities = 117/145 (80%)
Strand = Plus / Plus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
|||||| || ||||||| | ||||| |||| | || |||||||||| | ||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 65 taggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaa 124
||| ||||||| ||| ||||||||||||| |||||| ||| ||| | ||||||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 125 atcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||| ||||||| || ||||||||| || ||||| ||||||| ||||||||||||
Sbjct: 30 actttctggcattgcccacattcatatatatgttaataaatctagacatatatatgtgcc 89
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
|||||||||||| | ||||| ||| |||| | |||||||||
Sbjct: 90 aagattcattaacatatatatgaatgtgggcaatgctagaaa 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
||||||||||||||| || ||||||||| || ||||||||||| |||| |||||| |||
Sbjct: 133 actttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtc 74
Query: 83 tagattcattaacttctatataaatatggg 112
|||||| |||||| | ||||| ||| ||||
Sbjct: 73 tagatttattaacatatatatgaatgtggg 44
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatat 77
|||| |||||||||
Sbjct: 71 ctagacatatatat 84
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 72 atatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctac 131
|||||| ||| ||||||||||||| || |||| |||||| | | |||||||| | |||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttac 25
Query: 132 attatgaaacggagggag 149
||||||||||||||||||
Sbjct: 24 attatgaaacggagggag 7
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||| ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 102 ctccgttttacaatgtaagactttctagcattgctcatattcatatagat 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattg 36
|||||||||| ||||||| ||||||||||||||
Sbjct: 11 ctccgtttcataatgtaaaactttctagcattg 43
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctaggcatatata 76
|||| ||||||||
Sbjct: 71 ctagacatatata 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 73 tatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctaca 132
||||| ||| ||||||||||||| || |||| ||| |||| | |||||||| | ||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 133 ttatgaaacggagg 146
|| |||||||||||
Sbjct: 23 ttgtgaaacggagg 10
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 69 catatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcc 128
|||||| || ||||||||||||||||| ||||||| || |||||| ||||||||| ||
Sbjct: 54 catatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtct 113
Query: 129 tacattatgaaacggagggag 149
|| ||| ||||||||||||||
Sbjct: 114 tatattgtgaaacggagggag 134
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| ||||||||||||| | || || ||||||||| |||||||||
Sbjct: 130 ctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaat 71
Query: 64 cta 66
|||
Sbjct: 70 cta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 69 catatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcc 128
|||||| || ||||||||||||||||| ||||||| || |||||| ||||||||| ||
Sbjct: 87 catatacatatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtct 28
Query: 129 tacattatgaaacggagggag 149
|| ||| ||||||||||||||
Sbjct: 27 tatattgtgaaacggagggag 7
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| ||||||||||||| | || || ||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||||||||||||
Sbjct: 129 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaat 70
Query: 64 ctaggcatatata 76
|||| ||||||||
Sbjct: 69 ctagacatatata 57
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 133 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaat 74
Query: 64 ctag 67
||||
Sbjct: 73 ctag 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| |||||||| | |||||||| | |||||| |||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 130
Query: 143 gagggag 149
|||||||
Sbjct: 131 gagggag 137
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||| ||||||||| || |||||||||||| |||||||||
Sbjct: 136 ctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgttaatgaat 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||| ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacattcatatagat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||||| ||| |||| | ||||||||| || |||||||||||||||||||||
Sbjct: 59 tctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggag 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||| || |||||||||| ||||||| ||| |||| | ||||| ||| | ||||||||
Sbjct: 68 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattat 127
Query: 137 gaaacggagggag 149
|||||||||||||
Sbjct: 128 gaaacggagggag 140
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| || || ||||||||| ||||| ||||||||| |||||||||
Sbjct: 131 ctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 72
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatataga 52
|||||||||| ||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 11 ctccgtttcataatgtaatactttatagcattgctcatatacatataga 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 75 tatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacatt 134
|||||||||| |||||||||| ||||||| ||||| | | ||||| || || ||||||
Sbjct: 61 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 120
Query: 135 atgaaacggagg 146
|||||||||||
Sbjct: 121 gtgaaacggagg 132
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 99/120 (82%)
Strand = Plus / Plus
Query: 15 aatgtaatactttctagcattgcacatattcatatagatattaatgaatctaggcatata 74
||||||| ||||||||||||||| || |||||||| || ||||||||||||||| | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 75 tatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacatt 134
||| ||| |||||||||| | ||||||| ||| |||| | || |||||| || ||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 15 aatgtaatactttctagcattgcacatattcatatagatattaatgaatctaggcatata 74
||||||| |||||||| |||||| || |||||||||||| ||||||||||| ||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 75 tatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacatt 134
| |||| ||||||||||| | | |||| ||| |||| | ||||||||| || ||||||
Sbjct: 60 tgtgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| |||||||||||||| || |||||||||||| |||| ||||
Sbjct: 102 ctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaat 43
Query: 64 ctag 67
||||
Sbjct: 42 ctag 39
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||| ||||||| ||||| ||||||| ||| ||| | ||||||||| || ||||||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 137 gaaacggaggga 148
||||||||||||
Sbjct: 94 gaaacggaggga 105
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | |||||| | |||||||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaac 61
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
||||||||||||||||| | ||||| |||| | || |||||||| ||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 65 taggcatatatatgtgtttagattcattaa 94
||| | |||||| ||| ||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaa 101
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| || || ||||||||| ||||| ||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 70
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatataga 52
|||||||||| ||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 131 ctccgtttcataatgtaatactttatagcattgctcatatacatataga 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 75 tatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacatt 134
|||||||||| |||||||||| ||||||| ||||| | | ||||| || || ||||||
Sbjct: 81 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 22
Query: 135 atgaaacggagg 146
|||||||||||
Sbjct: 21 gtgaaacggagg 10
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| |||||||| | |||||||| | |||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||| |||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 150 ctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 91
Query: 64 ctaggcatatatatgt 79
|||| |||||||||||
Sbjct: 90 ctagacatatatatgt 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 118/146 (80%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||| |||||||||| | |||||||||| | |||||||| ||| |||||||||
Sbjct: 11 ctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| |||||||| ||| ||||||||||||| || |||| ||| |||| | ||||||||
Sbjct: 71 gtagacatatata--tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 128
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| || |||||||||||
Sbjct: 129 tgacttacattgtggaacggagggag 154
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | ||||||||||| ||| |||||||||
Sbjct: 134 ctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaat 75
Query: 64 ctag 67
||||
Sbjct: 74 ctag 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| |||||||| | |||||||| | ||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 143 gagg 146
||||
Sbjct: 132 gagg 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| |||||||| | |||||||| | |||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || |||||||||||| |||||||||
Sbjct: 120 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 61
Query: 64 ctag 67
||||
Sbjct: 60 ctag 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||| ||| |||| | ||||||||| || || | |||||||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 117
Query: 143 gagg 146
||||
Sbjct: 118 gagg 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
|||||||||||| || | ||||||||||||||||
Sbjct: 40 tgctagaaaatcttataatatgaaacggagggag 7
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| | |||||||||||
Sbjct: 136 ctccgtttcacaatgtaagtcattctagcatttcccatattcatat 91
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||| || |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaac 61
Score = 60.0 bits (30), Expect = 9e-09
Identities = 117/146 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||||| | |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| ||||||||||||| | |||| ||| ||| | ||||||||
Sbjct: 71 ctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||| ||| | || |||||||| | | |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaac 61
Score = 67.9 bits (34), Expect = 4e-11
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || || ||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | |||||| ||| ||||||||||||| | |||| ||| |||| | | ||||||
Sbjct: 71 ctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaa 130
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 131 tgacttacattgtgaaacggagggag 156
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | ||||||||||| |||||||||||||
Sbjct: 120 ctccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaat 61
Query: 64 cta 66
|||
Sbjct: 60 cta 58
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 81 tttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaa 140
|||||||||||||| || |||| |||||| | | |||||||| | ||||||||||||
Sbjct: 56 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 115
Query: 141 cggagggag 149
|||||||||
Sbjct: 116 cggagggag 124
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 69.9 bits (35), Expect = 9e-12
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| ||||||||||||||| || |||||| ||||| ||| |||||
Sbjct: 133 ctccgtttcacaatgtaagactttctagcattgc-cacattcatttagatgttattgaat 75
Query: 64 cta 66
|||
Sbjct: 74 cta 72
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctaggcatata 74
|||| ||||||
Sbjct: 71 ctagacatata 81
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| | |||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattca 90
|||| ||||||| | ||| ||||||||
Sbjct: 92 ctagacatatatgtatgtctagattca 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 116/145 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||||||| | || |||||||| || || |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| |||| |||| ||| |||||||||| || || |||| ||| || | | ||||||||
Sbjct: 71 ctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
Query: 124 aatcctacattatgaaacggaggga 148
| |||||| |||||||||||||
Sbjct: 131 tgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| ||||||| ||| |||| | |||||||| | |||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||||||||||| | |||||||||| | || ||||||||||||
Sbjct: 118 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat 69
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||| | || ||||||||| || |||||||||
Sbjct: 126 ctccgtttcaaattataagactttctagcattacccacattcatatatatgttaatgaat 67
Query: 64 ctaggcatatatatg 78
|||| ||||||||||
Sbjct: 66 ctagacatatatatg 52
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 72 atatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctac 131
|||||| ||| ||||||||||||| | ||||| ||| |||||| ||||||||| || ||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 132 attatgaaacggagggag 149
| | ||||||||||||||
Sbjct: 113 aatttgaaacggagggag 130
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| |||||||| |||||| || |||||||||||| ||||||||
Sbjct: 132 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 73
Query: 64 ctaggcatatatat 77
|||| |||||||||
Sbjct: 72 ctagacatatatat 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 70 atatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcct 129
|||||||| ||| ||||||||||| | ||||||| ||| |||| | || |||||| || |
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctt 116
Query: 130 acattatgaaacggagggag 149
| | ||||||||||||||||
Sbjct: 117 ataatatgaaacggagggag 136
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||||||| ||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| | |||||| ||| |||||||||||
Sbjct: 71 ctagacggatatatatgtctagattcatta 100
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || || ||||| ||| ||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaa 94
|||| ||||||||| || ||||||||||||
Sbjct: 92 ctagacatatatatccgtctagattcattaa 62
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 88/105 (83%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
|||||||||||| |||||||||||| |||||||||||| || ||||||||||| ||||
Sbjct: 112 attcatatagatgttaatgaatctatgcatatatatgtctt--gattcattaacatctac 55
Query: 102 ataaatatgggtagtgctagaaaatcctacattatgaaacggagg 146
|| ||| |||| | ||||| || | |||||| |||||||||||
Sbjct: 54 atgaatgtgggaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||| ||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatat 103
| || |||||||| || ||||||||||||| |||||||
Sbjct: 71 caagacatatata--tgcatagattcattaacatctatat 108
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| | | |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| | |||||| ||| |||||||||||
Sbjct: 71 ctagatagatatatatgtctagattcatta 100
Score = 65.9 bits (33), Expect = 1e-10
Identities = 117/145 (80%)
Strand = Plus / Minus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
||||||||| ||||||| | ||| | |||| | || |||||||| ||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 65 taggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaa 124
||| ||||||||| | | ||||||||||||| | |||| ||| |||| | ||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 125 atcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagggag 7
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 67.9 bits (34), Expect = 4e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
|||||||||| | || |||||||| ||| ||||||||||||| | |||||| ||| |||
Sbjct: 7 ttctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtctag 66
Query: 86 attcattaacttctatataaatatgggtagtgctagaa 123
|||||||||| || |||| ||| |||| | ||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
|||||||||| | || |||||||| ||| ||||||||||||| ||||||||| | | |||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctag 45
Query: 86 attcattaac 95
||||||||||
Sbjct: 44 attcattaac 35
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||||||||||| |||||||||| |||| || ||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagactttctagcgttgcccacattcatatagat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||||||||||| | ||||||||||||| || ||||||||||||
Sbjct: 114 ctccgtttcacaatgtaagagtttctagcattgcccacattcatatagat 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||||| ||| |||| | ||||||||| || |||||| ||||||||||||||
Sbjct: 66 tctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggag 118
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || |||||||| |||| ||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| | |||||| ||| |||||||||||
Sbjct: 71 ctagatagatatatatgtctagattcatta 100
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| || |||||||| ||| ||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| ||||||||| | | |||||||||||
Sbjct: 92 ctagacatatatatctatctagattcatta 63
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 135 ctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaat 76
Query: 64 c 64
|
Sbjct: 75 c 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 c 64
|
Sbjct: 71 c 71
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 70 atatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcct 129
|||||||||||||||||||||||||| |||||||| || |||| | || |||||| || |
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtctt 112
Query: 130 acattatgaaacggagg 146
| ||| | |||||||||
Sbjct: 113 atattgtaaaacggagg 129
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||| ||||| ||| |||||||| |||||| || || |||||||| |||||||||
Sbjct: 128 ctccgttttacaatataagactttctaacattgcccacatatatatagatgttaatgaat 69
Query: 64 cta 66
|||
Sbjct: 68 cta 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 99 tatataaatatgggtagtgctagaaaatcctacattatgaaacggaggga 148
|||||| || |||| | ||||||||| || || |||||||||||||||||
Sbjct: 57 tatatagatgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgc 37
|||||||||| ||| ||| |||||||||||||||
Sbjct: 11 ctccgtttcataatataagactttctagcattgc 44
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/92 (84%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatc--taggcatatatatgtg 80
||||||||| ||||| || |||||||||||| |||||||||| || || |||| ||||
Sbjct: 30 actttctagaattgcccacattcatatagatgttaatgaatctatacacacatatgtgtg 89
Query: 81 tttagattcattaacttctatataaatatggg 112
| ||||||||||||| ||||||| ||| ||||
Sbjct: 90 tatagattcattaacatctatatgaatgtggg 121
Score = 63.9 bits (32), Expect = 6e-10
Identities = 98/119 (82%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 33 attgcacatattcatatagatattaatgaatctaggcatatatatgtgttta--gattca 90
||||| || |||||||||||| |||||||||||| || | |||||||| || ||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 91 ttaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||| ||||||| ||| |||| | | ||||||| || || | |||||||| |||||||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggag 7
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatcta 66
||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 107 actttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||||||||||||||||| ||||||| ||| |||| | ||||||||| || || | |||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 137 gaaacggagg 146
||||| ||||
Sbjct: 118 gaaactgagg 127
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||||||||||| ||| |||||||||
Sbjct: 139 ctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 80
Query: 64 ctag 67
||||
Sbjct: 79 ctag 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| ||||||| | |||||||| | |||||| |||||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 136
Query: 143 gagggag 149
|||||||
Sbjct: 137 gagggag 143
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatcta 66
||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 107 actttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 77 tgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacattat 136
||||||||||||||||||| ||||||| ||| |||| | ||||||||| || || | |||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 137 gaaacggagg 146
||||| ||||
Sbjct: 118 gaaactgagg 127
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 143 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 84
Query: 64 ctag 67
||||
Sbjct: 83 ctag 80
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| ||| |||| | |||||||| | |||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | || |||||||| |||||||||||||
Sbjct: 109 ctccgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaat 50
Query: 64 ctag 67
||||
Sbjct: 49 ctag 46
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | || ||||||| | ||||||||||| ||| |||||||||
Sbjct: 143 ctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaat 84
Query: 64 ctaggcatatat 75
|||| |||||||
Sbjct: 83 ctagacatatat 72
Score = 48.1 bits (24), Expect = 3e-05
Identities = 78/95 (82%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 55 ttaatgaatctaggcatatatatgtgtttagattcattaacttctatataaatatgggta 114
||||||||||||| ||| |||| ||| ||||||||||||| || |||| |||||||| |
Sbjct: 55 ttaatgaatctag--atagatatatgtctagattcattaacatcaatatgaatatgggaa 112
Query: 115 gtgctagaaaatcctacattatgaaacggagggag 149
||||| || | || ||| ||||||||||||||
Sbjct: 113 atgctaaaatgacttatattgtgaaacggagggag 147
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 74 atatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacat 133
|||||| | ||||||||||||| || ||| |||| |||| | ||||||||| || |||||
Sbjct: 82 atatgtttctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacat 23
Query: 134 tatgaaacggagggag 149
|||||||| |||||||
Sbjct: 22 tatgaaactgagggag 7
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| ||||||||||||||| || ||| ||| ||| |||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||| ||||| ||||||| ||||||||||||||| || ||||||||
Sbjct: 124 ctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | |||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||||||| | |||||||| ||| |||||||||
Sbjct: 152 ctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
||| ||| ||||| | | ||||||||||||| || |||| ||||| || | ||||||||
Sbjct: 92 atagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaa 33
Query: 124 aatcctacattatgaaacggagg 146
| |||||| |||||||||||
Sbjct: 32 tgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||| ||||| ||||||| |||||||||||||| || |||||||||||| ||||| |||
Sbjct: 11 ctccatttcataatgtaagactttctagcattgtccacattcatatagatgttaataaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
|||||| |||||| ||||||| ||| ||| | ||||||||| || |||||||||||| |
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgc 37
|||||||||| ||||||| |||||||||||||||
Sbjct: 118 ctccgtttcataatgtaagactttctagcattgc 85
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
||||||||| || |||||||||||||||||||||
Sbjct: 89 tgctagaaagtcttacattatgaaacggagggag 122
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| |||||||| |||||||| |||||| ||||| ||||| |||
Sbjct: 118 ctccgtttcacaatataagactttctaatattgcacacattcatttagatgttaataaat 59
Query: 64 cta 66
|||
Sbjct: 58 cta 56
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
||||||||||||||||| | |||||||||| | || |||||||| ||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 65 tag 67
|||
Sbjct: 72 tag 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| |||||| |||| |||||||||||||
Sbjct: 140 ctccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaat 81
Query: 64 cta 66
|||
Sbjct: 80 cta 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
|||||||||||| || |||||||||||| | |||||||| | |||||| |||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 143 gagggag 149
|||||||
Sbjct: 138 gagggag 144
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 5 tccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatc 64
||||||||||||||||| | |||||||||| | || |||||||| ||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 65 tag 67
|||
Sbjct: 72 tag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| |||||| |||| |||||||||||||
Sbjct: 140 ctccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaat 81
Query: 64 cta 66
|||
Sbjct: 80 cta 78
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| ||| || |||||||| ||| |||||||||
Sbjct: 151 ctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaat 92
Query: 64 ctaggcatatatatgtgtttagattcattaa 94
|||| ||||||||| | | ||||||||||||
Sbjct: 91 ctagacatatatatctatctagattcattaa 61
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaac 95
|||||||| ||||||||||||||||| | |||||| ||| |||||||||||||
Sbjct: 48 attcatattgatattaatgaatctagatagatatatatgtctagattcattaac 101
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 59 tgaatctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgc 118
||||||||| |||||||| | ||||||||| |||| ||||||| |||||| | | |||
Sbjct: 97 tgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatgc 38
Query: 119 tagaaaatcctacattatgaaacggagggag 149
||||| | |||||||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggag 7
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| || |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| | |||||| | | |||||||||||
Sbjct: 71 ctagatagatatatatttctagattcatta 100
Score = 54.0 bits (27), Expect = 6e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 56 taatgaatctaggcatatatatgtgtttagattcattaacttctatataaatatgggtag 115
|||||||||||| |||||||| | | ||||||||||||| || |||| ||| |||| |
Sbjct: 100 taatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 116 tgctagaaaatcctacattatgaaacggagg 146
|||||||| | |||||| |||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 9e-09
Identities = 118/146 (80%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||| |||||||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | | |||| | | ||||||||||||| | ||||||||||||| | || |||||
Sbjct: 71 ctagataga-atatatatctagattcattaacattaatataaatatgggaaatgttagaa 129
Query: 124 aatcctacattatgaaacggagggag 149
| |||||| ||||||||||||||
Sbjct: 130 tgacttacattgtgaaacggagggag 155
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| | |||||| |||| || |||||||||
Sbjct: 151 ctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaat 92
Query: 64 ctag 67
||||
Sbjct: 91 ctag 88
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 tctccgtttcacaatgtaatactttctagcattg 36
||||||||||||||||||| ||||||||||||||
Sbjct: 89 tctccgtttcacaatgtaagactttctagcattg 56
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattc 45
|||||| ||||||| |||||||||||||| |||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgtccatattc 52
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || ||| |||| || |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaat 70
Query: 64 ctaggcatatatat 77
|||| |||||||||
Sbjct: 71 ctagacatatatat 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 6 ccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 72 atatatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctac 131
|||||| ||| ||||||||||||| | |||||||| |||| | |||||||| | |||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttac 25
Query: 132 attatgaaacggagg 146
||| |||||||||||
Sbjct: 24 attgtgaaacggagg 10
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctag 67
||||||||||||||| || |||||||| ||| |||||||||||||
Sbjct: 2 actttctagcattgcccacattcatatggatgttaatgaatctag 46
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctag 67
|||||||| |||||| || |||||||| ||| |||||||||||||
Sbjct: 111 actttctaacattgcccacattcatatggatgttaatgaatctag 67
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
|||||||| | ||||||| |||||||||| ||||||||| || || | ||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 146 g 146
|
Sbjct: 109 g 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 108 ctccgtttcatattataagactttctagcattacccatattcatatagatgataatgaat 49
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||||||||||| | |||||||||| | ||||||||||| |||||
Sbjct: 131 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 80
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | | |||||||| |||||||||||||
Sbjct: 120 ctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || ||||||||| | |||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| | ||||| ||| |||| | ||||||||| || || | |||||||||
Sbjct: 73 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| | |||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | |||||| |||| ||| ||||| |||
Sbjct: 139 ctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaat 80
Query: 64 ctag 67
||||
Sbjct: 79 ctag 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
|||||| |||||| || ||||||||||| | | |||||||| | |||||| |||||||
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacg 136
Query: 143 gagggag 149
|||||||
Sbjct: 137 gagggag 143
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| |||||||||| ||| ||||||||
Sbjct: 152 ctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||| ||||||||
Sbjct: 92 ctagacatatatatctatctagagtcattaac 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||| ||| ||| ||||||| |
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgact 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| | |||||| ||| |||||||||||
Sbjct: 71 ctagatagatatatatgtctagattcatta 100
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||| ||||||| | |||||||||||| || || ||||||||| |||||||||||||
Sbjct: 122 gtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctag 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagg 146
||||||| ||||||||| |||||||| | ||||||||||||||||||
Sbjct: 59 tctatatgcatatgggtaatgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| ||||||||||||||| || ||||||||| | |||||||||
Sbjct: 122 ctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaat 63
Query: 64 ctag 67
||||
Sbjct: 62 ctag 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| | ||||| ||| |||| | ||||||||| || || | |||||||||
Sbjct: 60 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 119
Query: 143 gagggag 149
|||||||
Sbjct: 120 gagggag 126
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 71/85 (83%), Gaps = 4/85 (4%)
Strand = Plus / Minus
Query: 28 ctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttagat 87
|||||||||| || ||||||||| || ||||||||||||| |||||| ||| |||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctag----atatatatgtctagat 35
Query: 88 tcattaacttctatataaatatggg 112
|||||||| | ||||| ||| ||||
Sbjct: 34 tcattaacatatatatgaatgtggg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 32 cattgcacatattcatatagatattaatgaatctaggcatatatat 77
|||||| || ||||||||| || ||||||||||||| |||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatatat 50
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 3 tctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaa 62
||||||||||||||||||| | ||||| |||| | || |||||||| ||| ||||||||
Sbjct: 10 tctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 69
Query: 63 tcta 66
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| || ||||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaat 65
Query: 64 ctaggcatatat 75
|||| |||||||
Sbjct: 64 ctagacatatat 53
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | | |||||||| ||| ||||||||
Sbjct: 146 ctccgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaat 87
Query: 64 ctaggcatatat 75
|||| |||||||
Sbjct: 86 ctagacatatat 75
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | || ||||||| | || |||||||| || |||||||||
Sbjct: 11 ctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaat 107
|||| | |||||| ||| ||||||||||| | || ||||||||
Sbjct: 71 ctagatagatatatatgtctagattcattatcatcaatataaat 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| || ||| |||| ||| ||||||||
Sbjct: 152 ctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| ||||||||| | | |||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaac 61
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||||||||||| | |||||||||| | ||||||||||| |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| | || |||||||| ||| |||||||||
Sbjct: 130 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 71
Query: 64 ctag 67
||||
Sbjct: 70 ctag 67
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| ||||||||||| || |||||||||
Sbjct: 128 ctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaat 69
Query: 64 ctag 67
||||
Sbjct: 68 ctag 65
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 121 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaat 62
Query: 64 ctag 67
||||
Sbjct: 61 ctag 58
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| || | |||||||
Sbjct: 132 ctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaat 73
Query: 64 ctaggcatata 74
|||| ||||||
Sbjct: 72 ctagacatata 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| | || ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | |||||| |||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaat 70
Query: 64 ctaggcatata 74
|||| ||||||
Sbjct: 71 ctagacatata 81
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
|||||| |||||| ||||||| ||| ||| | |||||||| | | ||||||||||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 143 gagggag 149
|||||||
Sbjct: 129 gagggag 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| ||||||||||| || |||||||||||| ||||| |||
Sbjct: 131 ctccgtttcataatgtaagttattctagcattgtccacattcatatagatgttaataaat 72
Query: 64 ctaggcata 72
|||| ||||
Sbjct: 71 ctagacata 63
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 6e-07
Identities = 116/146 (79%), Gaps = 6/146 (4%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| | || |||||||| ||| | |||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
|||| | || ||| |||||||||| || || |||| ||| |||| | ||||||||
Sbjct: 71 ctag------acatctgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 124
Query: 124 aatcctacattatgaaacggagggag 149
| |||||||||||||||||||||
Sbjct: 125 tgacttacattatgaaacggagggag 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | || |||||||| ||| | |||||||
Sbjct: 146 ctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaat 87
Query: 64 ctag 67
||||
Sbjct: 86 ctag 83
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatcta 66
|||||||||||||| | |||||||||| | || |||||||| ||| ||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
|||||||||| | ||||||||||||| ||| ||||| | | ||||||||||||| ||||
Sbjct: 19 attcatataggtgttaatgaatctagacatctatatatatctagattcattaacacctat 78
Query: 102 ataaatatggg 112
|| ||| ||||
Sbjct: 79 atgaatgtggg 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaac 95
|||||||||| | ||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 84 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaac 31
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | ||||| |||| |||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || |||||||| ||| |||||||||
Sbjct: 134 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 75
Query: 64 cta 66
|||
Sbjct: 74 cta 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| | || ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaat 70
Query: 64 ct 65
||
Sbjct: 71 ct 72
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| |||||||| |||| || ||| || ||||| |||||||||
Sbjct: 112 ctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaat 53
Query: 64 ct 65
||
Sbjct: 52 ct 51
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattg 36
|||||||||||||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatgtaaggctttctagcattg 43
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| || |||||||| ||| |||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| ||||||||| | | |||||||||||
Sbjct: 71 ctagacatatatatctatctagattcatta 100
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatataga 52
|||||| |||||||||||||||||||||||
Sbjct: 30 actttcaagcattgcacatattcatataga 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 23 actttctagcattgcacatattcatatagat 53
|||||| |||||||| |||||||||||||||
Sbjct: 59 actttcaagcattgcccatattcatatagat 89
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatga 61
|||||||||||||| ||| | |||||||||| |||| ||||| || |||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || ||||| || |||||||||||||
Sbjct: 129 ctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaat 70
Query: 64 ct 65
||
Sbjct: 69 ct 68
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| || |||||||| ||| |||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcatta 93
|||| ||||||||| | | |||||||||||
Sbjct: 71 ctagacatatatatttatctagattcatta 100
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| || |||||||||| | || ||||||||
Sbjct: 126 ctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatga 61
|||||||||||||||||| | |||||||||| | || |||||||| ||| |||||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaa 58
|||||||||||||||||| | |||||||||| | || |||||||| ||| ||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaa 65
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 97 tctatataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
||||||||||||||| ||||| ||| || |||||||||||||||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttacattatgaaacggagggag 7
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 9e-06
Identities = 76/92 (82%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || ||||||| || |||||||||
Sbjct: 150 ctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaat 91
Query: 64 ctaggcatatatatgtgtttagattcattaac 95
|||| |||||||| ||| || ||||||||||
Sbjct: 90 ctag--atatatatatgtctaaattcattaac 61
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaatctag 67
|||||||||||||| | |||||||||| | || |||||||| ||| |||||||| ||||
Sbjct: 136 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactag 77
Query: 68 gcata 72
||||
Sbjct: 76 acata 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaat 70
Query: 64 c 64
|
Sbjct: 71 c 71
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||||| ||| |||||||||
Sbjct: 128 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaat 69
Query: 64 c 64
|
Sbjct: 68 c 68
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatctag 67
|||||||||||||| || ||||||||| || |||||||||||||
Sbjct: 110 actttctagcattgtccacattcatatatatgttaatgaatctag 66
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||||||| || | || ||||||| | ||||||||||| ||| ||||| |||
Sbjct: 130 ctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaat 71
Query: 64 ctaggcatatata 76
|||| ||| ||||
Sbjct: 70 ctagacatttata 58
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 88/109 (80%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||||| |||| | || | ||||| | || ||| |||| ||| || ||||||
Sbjct: 11 ctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaat 70
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatggg 112
|||| ||||||| | | | ||||||||||||| || |||||||| ||||
Sbjct: 71 ctagacatatatttctatctagattcattaacatcaatataaatgtggg 119
Score = 50.1 bits (25), Expect = 9e-06
Identities = 88/109 (80%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||||||||| |||| | || ||||||| | || ||| |||| ||| |||||||||
Sbjct: 152 ctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatggg 112
|||| | | |||| ||| ||||||||| ||| || |||||||| ||||
Sbjct: 92 ctagatagaaatatatgtctagattcataaacatcaatataaatgtggg 44
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 78/95 (82%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 52 atattaatgaatctaggcatatatatgtgtttagattcattaacttctatataaatatgg 111
||||||||| |||||| ||| |||| ||| ||||| ||||||| || |||| ||| |||
Sbjct: 32 atattaatggatctag--atagatatatgtctagatccattaacatcaatatgaatgtgg 89
Query: 112 gtagtgctagaaaatcctacattatgaaacggagg 146
| | |||||||| | ||||||||||||||||||
Sbjct: 90 gaaatgctagaatgacttacattatgaaacggagg 124
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | ||||| |||| ||||||||||| ||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| | | |||||||| ||| |||||||||
Sbjct: 117 ctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 58
Query: 64 ctag 67
||||
Sbjct: 57 ctag 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||| ||| | || | |||||||| | ||||||||||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacg 114
Query: 143 gagggag 149
|||||||
Sbjct: 115 gagggag 121
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||||||||||| | |||||||||| | || |||||||| |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 ttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||| |||||| |||||||| || ||||||||
Sbjct: 90 ttcacaatgtaagactttccagcattgcccacattcatat 51
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
||||||| |||||| ||| | ||||| |||| | ||||||||||| ||| ||||||||
Sbjct: 152 ctccgttccacaatataagtcattctaacatttctcatattcatattgatgctaatgaat 93
Query: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgg 111
||| ||||||||| | | || |||||||| | || |||| |||||||
Sbjct: 92 ctaaacatatatatctatctaaattcattagcatcaatatgaatatgg 45
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 39 catattcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttc 98
||||||||||| ||| |||||||| ||| | |||||| ||||||||||||||| | ||
Sbjct: 46 catattcatattgatgctaatgaatttagatagatatatatgtttagattcattagcatc 105
Query: 99 tatataaatatg 110
|||| ||||||
Sbjct: 106 aatatgaatatg 117
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| || |||||||| ||| |||||| ||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||| ||| | ||||||||||| ||| ||||||||
Sbjct: 130 ctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaat 71
Query: 64 ctag 67
||||
Sbjct: 70 ctag 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||| | || |||| |||||||| | | |||||| | ||||||||||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacg 127
Query: 143 gagggag 149
|||||||
Sbjct: 128 gagggag 134
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | | |||||||| ||| |||||||||
Sbjct: 108 ctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| | | ||| |||||||||||||| || ||||| |||||| ||||| |||
Sbjct: 11 ctccgtttcatattataagactttctagcattgtccacattcacatagatgttaataaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagat 53
|||||||||| | | ||| |||||||||||||| || ||||||||||||
Sbjct: 131 ctccgtttcatattataagactttctagcattgtccacattcatatagat 82
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| || ||||||
Sbjct: 11 ctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaat 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| ||| || || |||
Sbjct: 138 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaat 79
Query: 64 ctag 67
||||
Sbjct: 78 ctag 75
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||||||| | || |||||||| ||| ||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 78
Query: 64 ctag 67
||||
Sbjct: 77 ctag 74
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||| ||| | || |||||||| |||| ||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
|||||||||| | | ||| ||||||||||||||| |||||||||
Sbjct: 108 ctccgtttcatattataagactttctagcattgcccatattcat 65
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||||||||||| | |||||||||| | || |||||||| |||||
Sbjct: 126 ctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaat 59
|||||||||||||||||| | |||||||||| | || ||| |||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatattaat 66
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 10 ttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||| |||||| |||||||| || ||||||||
Sbjct: 50 ttcacaatgtaagactttccagcattgcccacattcatat 89
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||| ||| | || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | |||||||||| | || |||||||| | | |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatat 55
|||||||||||||||||| | |||||||||| |||||||||||| ||||
Sbjct: 124 ctccgtttcacaatgtaagtcattctagcattttccatattcatatatatat 73
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | ||||| |||| | || |||||||| ||| |||||||||
Sbjct: 129 ctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 64 ctag 67
||||
Sbjct: 69 ctag 66
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||||||| | || ||| ||| | || |||||||| ||| |||||||||
Sbjct: 141 ctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaat 82
Query: 64 ctag 67
||||
Sbjct: 81 ctag 78
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| || |||||||| ||| |||||||||
Sbjct: 134 ctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaat 75
Query: 64 cta 66
|||
Sbjct: 74 cta 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| | || ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||| ||||||| | |||||||||| || |||||||| ||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
Query: 64 cta 66
|||
Sbjct: 71 cta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 8 gtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaa 62
|||||||||||||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
||||||||||||| || |||||| | ||| | |||||||| | | |||||| |||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 143 gagggag 149
|||||||
Sbjct: 13 gagggag 7
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 116 tgctagaaaatcctacattatgaaacggagg 146
||||| |||||| ||||||||||||||||||
Sbjct: 78 tgctaaaaaatcttacattatgaaacggagg 108
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | || ||||||| | ||||||||| ||| ||||||||
Sbjct: 126 ctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaat 67
Query: 64 ctaggcatatatatg 78
|||| ||||||||||
Sbjct: 66 ctagacatatatatg 52
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | ||||||||| | || |||||||| ||| |||||||||
Sbjct: 126 ctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 67
Query: 64 cta 66
|||
Sbjct: 66 cta 64
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatata 50
|||||| ||| ||| ||| |||||||||||||| ||||||||||||
Sbjct: 99 ctccgtctcataatataagactttctagcattgtccatattcatata 53
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatata 50
|||||||||| | | ||| ||||||||||||||| || |||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaa 62
||||||||||||||| || | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 11 ctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatga 61
|||||||||||||||||| | |||||||||| || |||||||| ||| |||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatga 68
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 146 ctccgtttcacaatgtaagtcattctagcattttccatattcatat 101
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatat 75
|||||||||| | || |||||||| ||| |||||||||||| |||||||
Sbjct: 97 ttctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
|||||||||||||| ||| | |||||||||| | || |||||||| ||| ||||||||
Sbjct: 129 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaat 70
Query: 64 ct 65
||
Sbjct: 69 ct 68
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgc 37
|||||||||| ||||||| ||||||||||||||
Sbjct: 77 ctccgtttcataatgtaagtctttctagcattgc 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 116 tgctagaaaatcctacattatgaaacggagggag 149
||||||||| | |||||||||||||||||||||
Sbjct: 48 tgctagaaagacttacattatgaaacggagggag 81
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 125 ctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatat 49
|||||||||||||||||| | |||||||||| | || ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 actttctagcattgcacatattcatatagatattaatgaatc 64
||||||||||| || || |||||||||||| ||||||||||
Sbjct: 114 actttctagcactgtccacattcatatagatgttaatgaatc 73
