miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 109 bits (55), Expect = 9e-24
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| |||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatctat 74
Query: 72 atatattgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|| | ||||||||||| ||||||||||||| |||||||||||
Sbjct: 75 at-gaatgtgggaaatgctagaatgacttacattgtgaaacgg 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 103 bits (52), Expect = 5e-22
Identities = 97/111 (87%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||| | ||| ||||||||||||||||||||||
Sbjct: 113 gtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatctag 54
Query: 72 atatattgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||| | ||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 53 --ataatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatt 48
|||||||||||||||||||| ||| |||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatatt 51
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 103 bits (52), Expect = 5e-22
Identities = 98/112 (87%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||||| |||||| |||||||| ||||||||||||
Sbjct: 116 gtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatctaa 57
Query: 72 atat-attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||||| ||||| |||||||||||| ||||||||||| |||||||
Sbjct: 56 atataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 103 bits (52), Expect = 5e-22
Identities = 98/114 (85%), Gaps = 7/114 (6%)
Strand = Plus / Plus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagatat 75
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctagacat 78
Query: 76 -------attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
| ||||||||||| ||||||| ||||| ||||||||||| |||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
||||||||||||||| |||| ||| |||||||| ||| ||||||||||
Sbjct: 122 gtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 148 gtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||| |||||||||||| | |||||||| ||||||||||||||| ||||||||||
Sbjct: 15 gtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 114 tgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||||| ||||||||||||| |||| ||| ||| |||||||||
Sbjct: 129 gtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| || |||||||||| ||||||||||| |||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 79.8 bits (40), Expect = 8e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 15 tcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagata 74
||||||||||||||||| ||| |||||||| ||| |||||||| ||||||||||||||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| | |||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgcaaaaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||| ||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattgtgatacgg 150
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Query: 72 atatat 77
||||||
Sbjct: 87 atatat 82
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||| |||||||||||||| ||| ||||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||||||||||||||| |||||||||||
Sbjct: 115 tgggaaatgttagaatgacttacattgtgaaacgg 149
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 139 gtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctag 80
Query: 72 atatat 77
| ||||
Sbjct: 79 acatat 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 attgatgttaatgaatctagata 74
|||||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagata 70
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 8e-21
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct: 130 gtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 71
Query: 72 at 73
||
Sbjct: 70 at 69
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 3e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 70
Query: 72 a 72
|
Sbjct: 69 a 69
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||| ||||||||||||| |||||||||||
Sbjct: 97 tgggaaatgctagaatgacttacattgtgaaacgg 131
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatt 48
|||||| ||||||||||||| ||| ||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcccatatt 51
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 3e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||| ||||||||||||| |||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatt 48
|||||| ||||||||||||| ||| ||||||||||||
Sbjct: 129 gtttcataatgtaagtcattctagcatttcccatatt 93
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 3e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct: 137 gtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctag 78
Query: 72 a 72
|
Sbjct: 77 a 77
Score = 83.8 bits (42), Expect = 5e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 13 ctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgttaat 66
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 100/118 (84%), Gaps = 7/118 (5%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||| ||| ||||| ||| ||||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctag 63
Query: 72 atat-------attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 62 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||||||| ||| |||||||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 88 tgtgggaaatgctagaatgacttatattgtgaaacgg 124
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 1e-19
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||| | ||| |||||||| ||||||||| ||
Sbjct: 116 gtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaatatat 57
Query: 72 atat-attgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| | |||||||||| ||||||||||||| |||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 63.9 bits (32), Expect = 5e-10
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| || |||| || || || ||| |
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatatatatattcattaatatca 74
Query: 72 atat-attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||| ||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 75 atatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 100/118 (84%), Gaps = 7/118 (5%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||| ||| ||||| ||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctag 74
Query: 72 atat-------attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 75 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||||||| ||| |||||||| ||| ||||||||
Sbjct: 122 gtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 95.6 bits (48), Expect = 1e-19
Identities = 92/106 (86%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatctag 74
Query: 72 atatat---tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||| || | || |||||| || |||||||||| || ||||||||
Sbjct: 75 atagatatatatgtgaaatgctacaatgacttacattatgaaacgg 120
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 135 gtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatctag 76
Query: 72 ata 74
|||
Sbjct: 75 ata 73
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgg 114
|||||| ||||||||||||| |||||||||||
Sbjct: 106 gaaatgctagaatgacttacattgtgaaacgg 137
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 146 gtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatct 89
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 79 gtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 113 gtgggaaatgctagaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 93.7 bits (47), Expect = 5e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaa 66
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 141 gtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaa 87
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaa 66
|||||||||| ||||||||| || ||||||||| ||| |||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 107 tgtgggaaatactagaatgacttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 82 ggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| || | || ||| |||||||||||||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatatag 89
Query: 72 a 72
|
Sbjct: 88 a 88
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||
Sbjct: 124 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatcaag 65
Query: 72 ata 74
|||
Sbjct: 64 ata 62
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 90 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||||| | |||| ||| ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || ||||||||| ||| |||||||||||||||||| |||
Sbjct: 148 gtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 114 tgtgggaaatattagaatgacttacattgtgaaacggaggaagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| || |||||||||||||||||| ||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgg 114
|||||| ||||||||||||| |||||||||||
Sbjct: 117 gaaatgctagaatgacttacattgtgaaacgg 148
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||| | ||||||||||| |||||||||||
Sbjct: 47 tgggaaatgcttgaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattgtgaaacgg 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
|||||||||||||||||||| ||| |||| ||| ||| ||||| || |||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattttccacattcatatttatattaat 66
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||| ||| |||| || ||| |||||||| ||||||||||||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatattgatattaatgaatcta 90
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||| ||||| ||| |||| | | ||| ||||||||| |||||||| |||
Sbjct: 136 gtttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaatttag 77
Query: 72 at 73
||
Sbjct: 76 at 75
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 87
Query: 72 atatat 77
| ||||
Sbjct: 86 acatat 81
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| || |||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgg 114
|||||| ||||||||||||| |||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||| | ||||||||||| |||||||||||
Sbjct: 114 tgggaaatgcttgaatgacttacattgtgaaacgg 148
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctag 74
Query: 72 atatat 77
||||||
Sbjct: 75 atatat 80
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||| | ||| ||||||||| ||||||||||||
Sbjct: 142 gtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctag 83
Query: 72 atatat 77
| ||||
Sbjct: 82 acatat 77
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 79.8 bits (40), Expect = 8e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||
Sbjct: 138 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 104 tgtgggaaatgctagaatgacttacattgtgaaacggggggagta 148
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| || ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtgggaaatactagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 135 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctag 76
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||||| || |||||||||||||||||| |||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagt 121
|||| |||||| ||||||||||||| || |||||||| ||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattatgaaacggaggaagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 107 aaatgctagaatgacttacattgtgaaacgg 137
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 89.7 bits (45), Expect = 8e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Query: 72 atata 76
||||
Sbjct: 75 ctata 79
Score = 60.0 bits (30), Expect = 7e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcat-tttagtatttcccatatttatattgatgttaatg 64
||||||||||||||||||| ||||| |||||||| ||| ||||||||| |||||
Sbjct: 133 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||
Sbjct: 126 gtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatctag 67
Query: 72 a 72
|
Sbjct: 66 a 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||||||||||| ||| ||||||||| |||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Query: 72 a 72
|
Sbjct: 79 a 79
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 105 tgtgggaaatgctagaatgacttacattgtgaaacgg 141
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 89.7 bits (45), Expect = 8e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||
Sbjct: 133 gtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Query: 72 atata 76
||||
Sbjct: 73 ctata 69
Score = 60.0 bits (30), Expect = 7e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcat-tttagtatttcccatatttatattgatgttaatg 64
||||||||||||||||||| ||||| |||||||| ||| ||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 68
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 99 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 143
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||
Sbjct: 122 ctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatct 63
Query: 70 a 70
|
Sbjct: 62 a 62
Score = 60.0 bits (30), Expect = 7e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
|||||||||||| ||||||||| ||| |||| ||| ||| ||||||||||||||
Sbjct: 9 ctgtttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaac 112
||||||||||| ||||||||||||| |||||||||
Sbjct: 86 tgtgggaaatgctagaatgacttacattgtgaaac 120
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 8e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 126 gtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctag 67
Query: 72 a 72
|
Sbjct: 66 a 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttccca 44
|||||||||||||||| ||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagtatttccca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||| || |||||||| | ||||||||||| |||||||
Sbjct: 94 tgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 89.7 bits (45), Expect = 8e-18
Identities = 98/113 (86%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| ||||| || ||| ||||||||||||||||||||||
Sbjct: 117 gtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatctag 58
Query: 72 ata-tattg-tgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||| | | | | |||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 57 atagtctagattcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| |||||||||||| ||||||||||| |||||||
Sbjct: 83 tgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttc 41
|||||||||||||||||||| ||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 87.7 bits (44), Expect = 3e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 113 tgtgggaaatgctagaatgacttacattgtgaaacgg 149
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||| ||||||||||||| |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 136 ctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaatct 77
Query: 70 agatatat 77
||||||||
Sbjct: 76 agatatat 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| || |||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 87.7 bits (44), Expect = 3e-17
Identities = 96/112 (85%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||| ||||||| |||||||||||||
Sbjct: 111 gtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa----- 57
Query: 72 atat-attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatatt 54
|||||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 77 tgtgggaaatgctagaatgacttagattgtgaaacgg 113
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 87.7 bits (44), Expect = 3e-17
Identities = 100/120 (83%), Gaps = 9/120 (7%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 74
Query: 72 atatat---------tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
| | || ||||||||||||||||||||||| | || |||||||| |||||||
Sbjct: 75 aaacatcactgtaaatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 87.7 bits (44), Expect = 3e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctag 74
Query: 72 atat 75
||||
Sbjct: 75 atat 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
|||||||||| ||||||||| || ||||||| | ||| ||||||||||||||
Sbjct: 128 gtttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 87.7 bits (44), Expect = 3e-17
Identities = 101/122 (82%), Gaps = 11/122 (9%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||
Sbjct: 126 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 67
Query: 72 atatat-----------tgtgggaaatgttagaatgacttacgttgtgaaacgggggaag 120
||| || | ||||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 66 atagatatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 121 ta 122
||
Sbjct: 6 ta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||||||||||||||||| |||||||||||
Sbjct: 92 tgtgggaaatgttagaatgacttacattgtgaaacgg 128
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaa 62
|||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa 65
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaa 62
|||||||||| ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 112 gtttcacaatataagtcattttagcatttctcatatttatattgatgttaa 62
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||
Sbjct: 136 gtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatcta 78
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 108 aaatgctagaatgacttacattgtgaaacgg 138
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 aaatat 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| |||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| | |||||||| ||| ||||||||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||
Sbjct: 136 gtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatcta 78
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||||||| ||| ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || ||||||||| ||||||||||| |||||||
Sbjct: 114 tgtgggaaatgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 120 gtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatcta 62
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||||| |||||| ||| ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||| ||| ||| ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 aatgttagaatgacttacgttgtgaaacgg 114
|||| ||||||||||||| |||||||||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||| ||| |||||||| |||||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| || ||| ||| ||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||| |||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtggaaaaagttagaatgacttatattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 114 tgtgggaaatgctagaatgacttatattgtgaaacgg 150
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| |||| |||||||||||| ||| |||||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| |||||||| | || ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagat 73
|||||| ||||||||| ||| |||| | ||||| ||||||||||||||||||||||||
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagat 75
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || ||||| ||| ||| ||||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctag 88
Query: 72 atatat 77
| ||||
Sbjct: 87 acatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||| ||||||||||| ||| |||| ||||||| ||| |||||||| |||||||||||||
Sbjct: 15 gttttacaatgtaagttattctagt-tttcccacattcatattgatattaatgaatctag 73
Query: 72 ata 74
|||
Sbjct: 74 ata 76
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| |||| |||||||||||||| |||||||||||
Sbjct: 113 tgtggaaaatattagaatgacttacattgtgaaacgg 149
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| |||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaatttag 74
Query: 72 atatat 77
||||||
Sbjct: 75 atatat 80
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 142 gtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatctag 83
Query: 72 atatat 77
| ||||
Sbjct: 82 agatat 77
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| || |||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 5e-16
Identities = 91/108 (84%), Gaps = 7/108 (6%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||| || |||| ||||||||| ||||||||||||
Sbjct: 122 gtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctag 63
Query: 72 atatat-------tgtgggaaatgttagaatgacttacgttgtgaaac 112
| |||| || |||||||| ||||||||||||| |||||||||
Sbjct: 62 acatatatatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttccc 43
|||||||||||||||||||||| ||| |||||||
Sbjct: 13 ctgtttcacaatgtaagtcattctagcatttccc 46
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 136 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 77
Query: 72 at 73
||
Sbjct: 76 at 75
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagat 73
|||||| ||||||||| ||| |||| | ||||| ||||||||||||||||||||||||
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctagat 76
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||||| ||| |||||||| |||||||||||||
Sbjct: 105 gtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatctag 46
Query: 72 atatat 77
||||||
Sbjct: 45 atatat 40
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| || |||||||| |||||||
Sbjct: 71 tgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||
Sbjct: 152 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 93
Query: 72 atatat 77
| ||||
Sbjct: 92 acatat 87
Score = 60.0 bits (30), Expect = 7e-09
Identities = 58/67 (86%), Gaps = 4/67 (5%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatt----tatattgatgttaatgaat 67
|||||||||||||||||||| ||| ||||| |||||| ||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgttaatgaat 74
Query: 68 ctagata 74
|||||||
Sbjct: 75 ctagata 81
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 118 tgtgggaaatgctagaatgacttacattgtgaaacgg 154
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| |||| |||||| |||||||
Sbjct: 101 tgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagatat 75
|||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||| ||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 83
Query: 76 at 77
||
Sbjct: 82 at 81
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagatat 75
|||||||||||||||| ||| |||| | | ||| |||||||||||||||||| |||| ||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 76 at 77
||
Sbjct: 79 at 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| ||||| |||||
Sbjct: 112 tgtgggaaatgctagaatgacttacattgtggaacgg 148
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||| ||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| || |||| ||| ||| |||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatcta 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||||||||| |||||||||||
Sbjct: 114 tgtggaaaatgttagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatc 68
|||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatc 68
|||||||||||||| ||||| ||| ||||| || ||| |||||||||||||||||||
Sbjct: 131 gtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||| ||||
Sbjct: 136 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactag 77
Query: 72 a 72
|
Sbjct: 76 a 76
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||||||| ||| |||| ||| ||| |||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaac 112
||||||||||| ||||||||||||| |||||||||
Sbjct: 102 tgtgggaaatgctagaatgacttacattgtgaaac 136
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||||||||| || |||||||| |||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| |||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtt 60
|||||| ||||||||||||| ||| |||||||| ||| |||||||||||
Sbjct: 125 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatctag 74
Query: 72 atata 76
|||||
Sbjct: 75 atata 79
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||| ||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatcta 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||| ||||| |||||||
Sbjct: 102 tgtgggaaatgctagaatgacttacattgtggaacggaggaagta 146
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Query: 72 a 72
|
Sbjct: 88 a 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtggaaaatgctagaatgacttacattgtgaaacgg 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||| |||||| ||| ||| ||| ||| |||| |||| ||||||||||||
Sbjct: 15 gtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctag 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 85 aatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| ||||||||| ||| ||||||||||| |||||||
Sbjct: 42 aatgctagaatgacatacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||||||||| || ||| ||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 79.8 bits (40), Expect = 8e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
|||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||| ||||||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 119 gtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 79.8 bits (40), Expect = 8e-15
Identities = 97/116 (83%), Gaps = 5/116 (4%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||| | ||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatctag 61
Query: 72 atatat-----tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
| |||| |||| |||||| |||||| |||||| ||||||||||| |||||||
Sbjct: 60 acatatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 86 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||| |||||||| |||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatctag 74
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| ||||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||| ||||||||||||| ||||||||||| |||||||
Sbjct: 47 tgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtgagaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 79.8 bits (40), Expect = 8e-15
Identities = 100/122 (81%), Gaps = 11/122 (9%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| |||||||||||| ||||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaatttag 74
Query: 72 atatat-----------tgtgggaaatgttagaatgacttacgttgtgaaacgggggaag 120
||| || ||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 75 ataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaag 134
Query: 121 ta 122
||
Sbjct: 135 ta 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 79.8 bits (40), Expect = 8e-15
Identities = 91/108 (84%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaatatat 74
Query: 72 atatat-----tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||| | ||| ||||| ||||||||||||| |||||||||||
Sbjct: 75 atatatatgaatatggaaaatgctagaatgacttacattgtgaaacgg 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||||||||||||||||||| ||| |||| ||||||| ||||
Sbjct: 120 gtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 79.8 bits (40), Expect = 8e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
||||||||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 93 aatgacttacgttgtgaaacgggggaagta 122
|||||||||| ||||||||||| |||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 79.8 bits (40), Expect = 8e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| |||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatctag 74
Query: 72 atat 75
||||
Sbjct: 75 atat 78
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatg 64
|||||||||||||||||||| ||| |||||||||||| |||||||||| ||||
Sbjct: 132 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatg 80
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 100 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||| ||||||| |||||||||||||||||| |||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatgtag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||||||||||| ||||||||||| |||||||
Sbjct: 43 aaatgttagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||| |||||||||||||||||||||| |||||| |||||||||
Sbjct: 126 gtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || ||||| || ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| | | ||| || ||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgagaaatggtagaatgacttacattgtgaaacgg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||||||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgttagaatgacttacattgtgaaacgg 13
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 50 atattgatgttaatgaatctagatat 75
||||||||||||||||||||||||||
Sbjct: 102 atattgatgttaatgaatctagatat 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 105 aaatgctagaatgacttacattgtgaaacgg 135
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| |||||||||||| ||| |||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| |||||||| || ||| |||||||| |||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||| ||| |||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||||||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgttagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| || |||||||| ||| ||||||||||||||||||||||
Sbjct: 125 gtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatctag 66
Query: 72 ata 74
|||
Sbjct: 65 ata 63
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||||||||||||||||||||| |||||||||||
Sbjct: 91 tgtgggaaatgttagaatgacttatattgtgaaacgg 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtta 61
|||||||||| ||||||||| ||| |||| ||| ||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 77.8 bits (39), Expect = 3e-14
Identities = 91/110 (82%), Gaps = 10/110 (9%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||| || |||||||||||||
Sbjct: 125 gtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctag 66
Query: 72 atatat----------tgtgggaaatgttagaatgacttacgttgtgaaa 111
| |||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 65 acatatataatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 91 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 13 tttcacaatgtaagtcattttagtatttcccatatttatatt 54
||||||||||||||||||| ||| |||||||| ||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||| ||| ||||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| |||| |||| ||| |||| || ||||||||||||| ||||||||||||
Sbjct: 148 gtttcacaatataagccattctagcatttttcacatttatattgatgataatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || ||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 92/108 (85%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatg----aat 67
|||||||||||||||||||| ||| |||||||| ||| |||| |||||||||| ||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagttaac 61
Query: 68 ctagatat-attgtgggaaatgttagaatgacttacgttgtgaaacgg 114
| ||||| | ||||||||||| ||||||||||||| |||||||||||
Sbjct: 60 atcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 77.8 bits (39), Expect = 3e-14
Identities = 98/116 (84%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaa----tgaat 67
|||||||||||||||||||| ||| |||||||| ||| |||| |||||||| | ||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaactcattaac 74
Query: 68 ctagatat-attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
| ||||| | ||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 75 atcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 72
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
|||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 96 tgtgggaaatgctagaatgacttatattgtgaaacgg 132
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 13 tttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctaga 72
||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||
Sbjct: 95 tttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatctaga 36
Query: 73 ta 74
||
Sbjct: 35 ta 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 93 aatgacttacgttgtgaaacgggggaagta 122
|||||||||| ||||||||||| |||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||||| ||| ||||||||||||||| ||||||
Sbjct: 119 gtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctag 60
Query: 72 atatat 77
| ||||
Sbjct: 59 acatat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| || |||||||| |||||||
Sbjct: 85 tgtgggaaatgctagaatgacttacattatgaaacggaggaagta 129
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||||||||||||||| ||| |||||||| ||| ||||||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct 72
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
||||||||| |||||||||| ||| |||||||| ||| ||||||||||||||
Sbjct: 127 gtttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||| ||| |||||||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgatagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 114 tgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| |||| ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| ||||| || || ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||| | || |||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||||||| ||| || | |||||||||||||| ||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| |||| |||||||||||| |||| || ||| |||| ||||||||||||||||
Sbjct: 146 gtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaatcta 88
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||||||| |||||||| |||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||| ||||||| | || ||||| | |||||||| |||| ||||||||||||| |||
Sbjct: 15 gtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaatttag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| |||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtgagaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatga 65
|||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtta 61
|||||||||||||| | ||||||| |||| ||| ||| ||||||||||||
Sbjct: 118 gtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| |||| |||||| |||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaa 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||| |||||||||||||| ||||| || ||| |||| |||||||||||||||||
Sbjct: 15 gtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||||| || ||| |||| ||||||| ||||| ||||||||||||||||
Sbjct: 124 gtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatctag 65
Query: 72 at 73
||
Sbjct: 64 at 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||| ||||||||||| |||||||
Sbjct: 96 aaatgctagaaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||||||| |||| |||||||| ||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| |||||||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctag 89
Query: 72 a 72
|
Sbjct: 88 a 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| |||| || |||| ||||||||||||| |||
Sbjct: 15 gtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatttag 74
Query: 72 atata 76
|||||
Sbjct: 75 atata 79
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| |||| ||||||||||||| || |||||||| |||||||
Sbjct: 49 tgtgggcaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 5e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatc 68
|||||||||||||||||||| ||| |||||||| ||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatc 68
|||||| ||||||||||||| ||| |||||||| ||| ||||||||| |||||||||
Sbjct: 128 gtttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 72
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| || ||||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 89
Query: 72 atata 76
|||||
Sbjct: 88 atata 84
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| | | | || ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 74
Query: 72 atatat 77
||||||
Sbjct: 75 atatat 80
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 5e-13
Identities = 85/103 (82%), Gaps = 11/103 (10%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||| | ||| |||||||||||||||||
Sbjct: 104 gtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaa----- 50
Query: 72 atatattgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 ------tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 82 ggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 74 ggaaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttccca 44
|||||||||||||||||||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 5e-13
Identities = 95/112 (84%), Gaps = 8/112 (7%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||||||||||| |||||| |||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccatattcatattg------atgaatcta- 67
Query: 72 atat-attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| | ||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||| |||||||||||| |||||||||||
Sbjct: 47 tgggaaatgctagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||||||| ||| ||||||||||| || |||||||
Sbjct: 134 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatctag 75
Query: 72 a 72
|
Sbjct: 74 a 74
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 100 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
||||||||||||||| |||| ||| |||||||| ||| ||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaat 70
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||| ||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatggcttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||||||| ||| |||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||||| ||| |||||||||| |||||||||||
Sbjct: 142 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 83
Query: 72 a 72
|
Sbjct: 82 a 82
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgatagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| || ||||||||
Sbjct: 108 tgtgggaaatgctagaatgacttacattatgaaacgg 144
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 89/106 (83%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||| ||||||||| || ||||| || |||||||| || ||| |||||||||
Sbjct: 15 gtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatctag 74
Query: 72 atatat---tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||| ||||||||||| ||||||||||||| || ||||||||
Sbjct: 75 atatatagatgtgggaaatgctagaatgacttacattatgaaacgg 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||||| ||||||||||||| ||| |||||||| || |||||
Sbjct: 118 gtttcataatgtaagtcattctagcatttcccacatctatat 77
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/108 (83%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||||||| |||| || | ||||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatctag 61
Query: 72 atatat-----tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||| || |||||||||| || |||||||||| |||| ||||||
Sbjct: 60 atagatataaatgtgggaaatactaaaatgacttacattgttaaacgg 13
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 15 gtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| || |||||||||| ||||||||||| |||||||
Sbjct: 92 aaatgctaaaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 99/122 (81%), Gaps = 11/122 (9%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| |||||||||||| ||||| ||| |||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaatttag 74
Query: 72 atatat-----------tgtgggaaatgttagaatgacttacgttgtgaaacgggggaag 120
||| || ||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 75 ataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaag 134
Query: 121 ta 122
||
Sbjct: 135 ta 136
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 91/110 (82%), Gaps = 7/110 (6%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| || ||||| ||| |||||||||||||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatctaa 63
Query: 72 atat-------attgtgggaaatgttagaatgacttacgttgtgaaacgg 114
| || | ||||| ||||| ||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtt 60
|||||||||||||||||||| ||| |||| ||| ||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||| ||| |||||||||||| ||||||||||| |||||||
Sbjct: 88 tgtgggatatgctagaatgacttatattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/108 (83%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| || | |||||||||||||||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatctag 61
Query: 72 atatat-----tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||| || |||| ||||| ||||||||||||| |||| ||||||
Sbjct: 60 atagatatgaatgtgagaaatactagaatgacttacattgttaaacgg 13
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 92 aaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttc 41
|||| ||||||||||||||| |||||||||
Sbjct: 15 gtttaacaatgtaagtcattctagtatttc 44
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/108 (83%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| |||| || |||| || ||| ||||||||||||||||||||||
Sbjct: 120 gtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatctag 61
Query: 72 atatat-----tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||| || ||||||||||| |||||||||||| |||||||||||
Sbjct: 60 atagatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 13
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||| ||||||||| ||| |||| ||| ||| |||||||||||||||||||||
Sbjct: 130 gtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatcta 72
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
|||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||||||| ||| |||| ||| ||| |||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaa 66
|||||||||||||||||||| ||| ||||| || ||| |||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||||||||| || |||||||| |||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaac 112
|||| |||||| ||||||||||||| |||||||||
Sbjct: 105 tgtgagaaatgctagaatgacttacattgtgaaac 139
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||| ||| ||| |||| ||| | |||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 76 attgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||| ||||| |||||| |||||| |||||||||||
Sbjct: 51 attgtggaaaatgctagaataacttacattgtgaaacgg 13
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| |||| | ||||| ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatatt 54
||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 99 gtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||||||| || |||||||||| ||||||||||| |||||||
Sbjct: 65 tgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcatttta 34
|||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcatttta 37
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| ||| |||| ||| | |||||||||||||||| ||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatcta 71
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 76 attgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||| ||||| ||||||||||||| |||||||||||
Sbjct: 93 attgtggaaaatgctagaatgacttacattgtgaaacgg 131
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 13 tttcacaatgtaagtcattttagtatttcccatatttatattgat 57
||||||||||||||||||||||| |||| || | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaa 66
||||||||||| |||||||| ||| |||||||| ||| |||||||||||||||||
Sbjct: 15 gtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||| | ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttgcattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||||| || ||| ||||| |||| |||||||||||
Sbjct: 128 gtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatctag 69
Query: 72 atatat 77
| ||||
Sbjct: 68 acatat 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||| ||| ||||| || ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||| ||||||||||||| |||||||||||
Sbjct: 94 tgtgagaaatgctagaatgacttacattgtgaaacgg 130
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 127 gtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 80 tgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 95 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||| ||||||||| |||| | | ||||||||||||| |||||||| |||
Sbjct: 136 gtttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaatttag 77
Query: 72 at 73
||
Sbjct: 76 at 75
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||| ||| ||| |||| || ||| ||||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctag 74
Query: 72 at 73
||
Sbjct: 75 at 76
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| || ||| ||| | ||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Query: 72 atatat 77
||||||
Sbjct: 86 atatat 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| | | |||||||| ||| ||| | |||||||||||| |||
Sbjct: 15 gtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgggaaatgccagaatgacttatattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 118 aaatgctagaatgacttacattgtgaaacgg 148
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||| |||||||||| | || |||| ||| ||| ||||||||||||||||||||||
Sbjct: 120 gtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctag 61
Query: 72 atatat 77
||||||
Sbjct: 60 atatat 55
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
||||||||||| |||||| ||||| ||||| |||||| ||||
Sbjct: 15 gtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||||| | |||||||| |||| ||||||||||||| |||
Sbjct: 15 gtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaatttag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | |||||| ||| |||||||| || | |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatctagatatat 77
|||||||| ||| |||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatat 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatctagata 74
|||||||| ||| ||||| || ||| |||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagata 51
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||| ||| ||| ||||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| ||||| || ||| |||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||||||||| |||||||||||
Sbjct: 114 tgtggtaaatgttagaatgacttacattgtgaaacgg 150
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| |||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatctagatatat 77
|||||||| ||| |||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatat 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatcta 64
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||||| || ||||||| |||| ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| | |||||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaatctag 89
Query: 72 a 72
|
Sbjct: 88 a 88
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||||||| | || ||| ||| ||||||||||||||| ||| |
Sbjct: 15 gtttcataatgtaagtcattttagcactttccacattcatattgatgttaatg-atcaat 73
Query: 72 atatattgtgggaaatgttagaatgacttacgttgtgaaac 112
|| | |||||||| || ||||||||||||| |||||||||
Sbjct: 74 at-gaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||||||||| ||| | |||||| ||| ||||||||
Sbjct: 115 ctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| || ||||||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatctag 74
Query: 72 atata 76
|||||
Sbjct: 75 atata 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||||||||||| ||| |||| ||| |||| |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatcta 90
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| |||| || ||||| ||||||||||||| |||
Sbjct: 148 gtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatttag 89
Query: 72 atata 76
|||||
Sbjct: 88 atata 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| || | ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| |||| ||||||||||||| || |||||||| |||||||
Sbjct: 114 tgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| |||| | |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Query: 72 a 72
|
Sbjct: 88 a 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 19 aatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctagatatat 77
||||||||||||| || |||||||| ||| |||| | |||||||||||||||||||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatat 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttac 102
|||||||||||||||||||||||||
Sbjct: 49 tgtgggaaatgttagaatgacttac 25
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtggaaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 51 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttccca 44
|||||||||||||||||||| ||| ||||||||
Sbjct: 85 gtttcacaatgtaagtcattctagcatttccca 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttc 41
|||||||||||||||||||||| ||| |||||
Sbjct: 13 ctgtttcacaatgtaagtcattctagcatttc 44
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 83 gaaatgttagaatgacttacgttgtgaaac 112
|||||| ||||||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtt 60
|||||||||||||||||||| ||| |||| ||||||| |||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 96/118 (81%), Gaps = 8/118 (6%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||| ||| ||| |||| ||| ||| ||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaatctaa 73
Query: 72 atat-------attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
| || | | ||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 74 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||| ||||||||| ||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatctac 74
Query: 72 atata 76
|||||
Sbjct: 75 atata 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtta 61
|||||||||| ||||||||||||| |||| || ||| || |||||||||
Sbjct: 127 gtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatg 64
|||||||||||||||||||| ||| ||||| || ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| ||| || ||||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| | | | || ||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 142 gtttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| |||| ||| ||| |||| ||||||||||| | |||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtttag 74
Query: 72 ata 74
|||
Sbjct: 75 ata 77
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 114 aaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
||||||| |||||||||||| |||||||| ||| ||||||||| ||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
|||||||||||||||||||| ||| |||| || |||||||||||||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 93 aaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtattt 40
|||||||||||||||||||||||| ||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 76 attgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 62 attgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttccc 43
|||||||||||||||||||||||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcatttccc 46
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 81 gggaaatgttagaatgacttacgttgtgaaacgg 114
|||||||| || |||||||||| |||||||||||
Sbjct: 46 gggaaatgctaaaatgacttacattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||||||||||||||||||| ||| |||| ||| | ||||||
Sbjct: 98 gtttcacaatgtaagtcattctagcattttccacaattatat 57
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatctagata 74
|||||||| ||| |||||||| ||| ||||||||||||||| |||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagata 73
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 24 aagtcattttagtatttcccatatttatattgatgttaatgaatctagat 73
|||||||| ||| |||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||||||| ||| ||||| |||||| |||| ||||||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatcta 73
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| ||| ||| ||| ||| |||||||||||||||| | |||
Sbjct: 142 gtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtttag 83
Query: 72 ata 74
|||
Sbjct: 82 ata 80
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||| ||| |||| ||| ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||||||||||||||| ||||||||| || ||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||| |||||||||||||||| |||| || |||||||||||||
Sbjct: 135 ctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||| |||| | || ||||||| |||||||| |||| |||||||||||| ||||
Sbjct: 15 gtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 74
Query: 72 atatat 77
||||||
Sbjct: 75 atatat 80
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | |||||| ||| ||| ||| |||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||||| || ||| ||| |||| ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||||||| ||| |||| || |||| |||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||||||| ||| |||||| ||||| |||| || |||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatcta 73
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| || ||||||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattatgaaacgg 150
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| || ||||| ||||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatctag 74
Query: 72 atatat 77
|||||
Sbjct: 75 gtatat 80
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||||| ||||||||| ||| |||||||| ||| | |||||| |||||||||||
Sbjct: 125 gtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatct 68
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 91 tgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| ||| |||||||| || | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
||||||||||||||| | || ||||||| |||| | |||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaatcta 90
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | ||||| ||| |||| ||| | || |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaatctag 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | |||||| ||| ||| ||| |||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||| |||| | || ||||||| |||||||| |||| |||||||||||| ||||
Sbjct: 148 gtttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | |||||| ||| ||| |||||| | ||| |||||||||||||
Sbjct: 146 gtttcacaatgtaagactttttagcattgtccacatttatttagatattaatgaatctag 87
Query: 72 atatat 77
||||||
Sbjct: 86 atatat 81
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatat 53
|||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 96 gtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 62 tgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttata 52
|||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 105 tgtgggaaatgctagaatgacttacattgtgaaacgg 141
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||| ||||||||| || |||| ||| ||| ||||||||||||||||||||||
Sbjct: 129 gtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatctag 70
Query: 72 atatat 77
| ||||
Sbjct: 69 acatat 64
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| |||||||||||||||||| || |||||||| |||||||
Sbjct: 95 tgtggaaaatgttagaatgacttatattatgaaacggaggaagta 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgtta 61
|||||| ||||||||||||| ||| |||| || |||||| |||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| ||||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttccca 44
|||||||||||||||||||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| |||||||||||| |||||||||||||||||
Sbjct: 127 gtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaatctag 68
Query: 72 a 72
|
Sbjct: 67 a 67
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||||| || ||| ||| |||| ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 13 tttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctaga 72
||||| ||||||||||||| ||| ||| | || ||| |||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 73 tatat 77
||||
Sbjct: 61 catat 57
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattga 56
|||||||||||||||||||| ||| |||||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 79 gtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||||||| ||||||||||||| |||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacgg 13
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||| ||| ||||||||| ||| |||| ||| ||| ||| ||||| ||||||||||
Sbjct: 13 ctgtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatct 72
Query: 70 agata 74
|||||
Sbjct: 73 agata 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||| ||||||||||||| ||| |||||||| ||| ||||||||||
Sbjct: 128 gtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 98/120 (81%), Gaps = 7/120 (5%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||| ||||||| ||||| ||| ||| |||| || |||| |||||||||||||||
Sbjct: 124 ctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatct 65
Query: 70 aga----tatat---tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||| ||||| | |||| |||| ||||||||||||| || |||||||| |||||||
Sbjct: 64 agacgtctatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| ||||||||||||| ||||| ||||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| || |||| ||||||| |||| ||| |||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 85 aatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| ||||||||||||| || |||||||| |||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||| ||| ||||| || ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 70 tgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||| ||| |||||| || ||| ||| | |||||| |||| |||||||||||||||
Sbjct: 13 ctgtttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatct 72
Query: 70 agat 73
||||
Sbjct: 73 agat 76
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||| |||| | || ||| ||| |||||||| |||| |||| ||||||||||||
Sbjct: 130 gtttcataatataagactttctagcattacccatattcatatagatgctaatgaatctag 71
Query: 72 at 73
||
Sbjct: 70 at 69
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaat 63
||||||||||| |||||||| |||||||| || |||||||||||| |||||
Sbjct: 98 gtttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||||||||| |||||||| || ||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
|||||||||||||||||||| ||| |||| ||| ||| |||| |||| ||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaat 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||||||||||||||||| |||||||||||
Sbjct: 43 aaatgttagaatgacttacattgtgaaacgg 13
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||||||||||||||||| || |||| | ||||| |||| |||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatcta 73
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 114 tgtggaaaatgctagaatgacttacattgtgaaacgg 150
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatga 65
||||||||| |||||||||||| ||| ||||| || ||| ||||||||| ||||||
Sbjct: 13 ctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||| |||||| |||||||||||| ||||||||||| |||||||
Sbjct: 91 tgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
||||||||||||||| |||||||| ||| | ||||| |||| |||||||||||||
Sbjct: 127 gtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 72
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 79 gtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||||||||| ||||||||||||| |||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacgg 13
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
|||||||||||||||||||| ||| |||||||| || |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttc 41
|||||||||||||||||||| ||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
||||||||||||||| |||||||| ||| | ||||| |||| |||||||||||||
Sbjct: 15 gtttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaat 70
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 83 gaaatgttagaatgacttacgttgtgaaacgggggaagta 122
|||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttc 41
|||||||||||||||||||| ||| |||||
Sbjct: 116 gtttcacaatgtaagtcattctagcatttc 87
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 23 taagtcattttagtatttcccatatttatattgatgttaatgaatctagatatat 77
||||||||| ||| ||||| || ||| ||||||||| ||||||||||||| ||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatat 50
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 19 aatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
||||||||||||| ||| ||||| || ||| ||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 16 cacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| ||||||||| || ||||| |||||| ||||||||| |||||||||||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatcta 90
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 84 aaatgttagaatgacttacgttgtgaaacgggggaagta 122
||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaat 67
|||||||||||||||||||| ||| |||| || || ||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaatgaat 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacgg 104
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| |||||||| || || |||| |||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||| ||| ||| |||| |||| |||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||||
Sbjct: 108 gtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| ||| |||| ||| ||| |||| |||| |||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| ||||||||||||| || |||| || || ||||||||| ||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaatctag 89
Query: 72 ata 74
|||
Sbjct: 88 ata 86
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| ||| |||||| |||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaatctaa 89
Query: 72 atatat 77
||||||
Sbjct: 88 atatat 83
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatga 65
|||| ||||| ||||||||| ||| ||||| || |||||||||||||| |||||
Sbjct: 83 gttttacaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| ||| |||| ||| |||| ||||||||| |||||||
Sbjct: 124 gtttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatctag 65
Query: 72 atatat 77
| ||||
Sbjct: 64 acatat 59
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 13 tttcacaatgtaagtcattttagtatttcccatatttatattgatg 58
||||| ||| ||||||||| ||| |||| |||||||||||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatttatattgatgttaatgaat 67
||||||||||||||||||||||||
Sbjct: 55 atatttatattgatgttaatgaat 78
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| |||| ||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 aaatat 83
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | |||||| ||| | || ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||| ||| ||||||||| ||| ||| |||| ||| |||| |||||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatct 72
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| |||| ||| |||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 aaatat 80
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | |||||| ||| | || ||| |||| |||||||||||||||||
Sbjct: 148 gtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaatctag 89
Query: 72 a 72
|
Sbjct: 88 a 88
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 41 cccatatttatattgatgttaatgaatctagatatat 77
|||| ||| |||| |||||||||||||||||||||||
Sbjct: 16 cccacattcatatggatgttaatgaatctagatatat 52
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| ||||||||||||| |||||||||||
Sbjct: 72 tgtggaaaatgctagaatgacttacattgtgaaacgg 108
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttacgttgtgaaacgggggaagta 122
||||||||||||| ||||||||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttata 52
|||||||||||||||||||| ||| |||||| | |||||||
Sbjct: 79 gtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 82 ggaaatgttagaatgacttacgttgtgaaacgg 114
||||||| ||||||||||||| |||||||||||
Sbjct: 49 ggaaatgctagaatgacttacattgtgaaacgg 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtat 38
|||||||||||||||||||| ||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtat 41
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
||||||||||||||||| | || ||| ||| |||| ||| || | |||||||||||||||
Sbjct: 13 ctgtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatct 72
Query: 70 a 70
|
Sbjct: 73 a 73
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttacgttgtgaaacgggggaagta 122
||||||||||||| ||||||||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtattt 40
|||||||||||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 tagaatgacttacgttgtgaaacgggggaagta 122
||||||||||||| ||||||||||| |||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 7e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||| |||||||| | || ||| ||| |||| |||| ||| |||||||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Query: 72 a 72
|
Sbjct: 75 a 75
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 37 atttcccatatttatattgatgttaatgaatctagatatat 77
|||||||| ||| |||| | |||||||||||||||||||||
Sbjct: 93 atttcccacattcatataggtgttaatgaatctagatatat 53
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 41 cccatatttatattgatgttaatgaatctagatatat 77
|||| ||| |||| |||||||||||||||||||||||
Sbjct: 120 cccacattcatatagatgttaatgaatctagatatat 84
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||||||||| |||||||||||| |||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttatattgtgaaacgg 13
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaa 111
||||||||||| |||||||||||| ||||||||
Sbjct: 71 tgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
|||| |||||||||||||||||||| || ||||||||
Sbjct: 49 tgtgagaaatgttagaatgacttacattatgaaacgg 13
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 37 atttcccatatttatattgatgttaatgaatctaga 72
|||||||| ||| |||||||||| ||||||||||||
Sbjct: 6 atttcccacattcatattgatgtcaatgaatctaga 41
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 37 atttcccatatttatattgatgttaatgaatctaga 72
|||||||| ||| |||||||||| ||||||||||||
Sbjct: 83 atttcccacattcatattgatgtcaatgaatctaga 48
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgt 59
|||||||||||||| ||||| ||| |||| ||||||| |||||||||
Sbjct: 94 gtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
|||||||||||||||||||| || |||| || || ||||||||| ||||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatctag 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||||||||||| |||||||||||
Sbjct: 93 aaatgatagaatgacttacattgtgaaacgg 123
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatatt 54
|||||||||||||||| ||| ||| |||||||| ||| |||||
Sbjct: 130 gtttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 10 ctgtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatct 69
|||||||| |||||||| | || ||| ||| ||| ||| |||| |||||||||||||||
Sbjct: 124 ctgtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatct 65
Query: 70 aga 72
|||
Sbjct: 64 aga 62
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||| ||| ||| |||| ||| ||| ||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||| ||| ||| |||| ||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 78 tgtgggaaatgttagaatgacttacgttgtgaaacgg 114
||||| ||||| |||||| |||||| |||||||||||
Sbjct: 81 tgtggnaaatgctagaataacttacattgtgaaacgg 117
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
||||||||||||||| | || ||| ||| ||| ||| |||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatcta 90
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatcta 70
|||||| |||||||| | || ||| ||| |||| ||| |||| ||||||||||||||||
Sbjct: 130 gtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| ||| |||| ||| || | |||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaatctag 89
Query: 72 atatat 77
| ||||
Sbjct: 88 acatat 83
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||| ||| ||| |||| ||| ||| ||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgat 57
|||||||||||||||| ||| ||| |||| ||| ||| ||||||||
Sbjct: 115 gtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| ||| ||| ||| || | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 atgttaatgaatctagatatat 77
||||||||||||||||||||||
Sbjct: 66 atgttaatgaatctagatatat 45
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 37 atttcccatatttatattgatgttaatgaatctagata 74
|||||||| || |||||||| ||||||||||||||||
Sbjct: 6 atttcccacgttcatattgatattaatgaatctagata 43
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 atgttaatgaatctagatatat 77
||||||||||||||||||||||
Sbjct: 35 atgttaatgaatctagatatat 56
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 12 gtttcacaatgtaagtcattttagtatttcccatatttatattgatgttaatgaatctag 71
||||||||||||||| | || ||| || |||| ||| || | |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaatgaatctag 74
Query: 72 atatat 77
| ||||
Sbjct: 75 acatat 80
